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Mattera A, Alfieri V, Granato G, Baldassarre G. Chaotic recurrent neural networks for brain modelling: A review. Neural Netw 2025; 184:107079. [PMID: 39756119 DOI: 10.1016/j.neunet.2024.107079] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/06/2024] [Revised: 11/25/2024] [Accepted: 12/19/2024] [Indexed: 01/07/2025]
Abstract
Even in the absence of external stimuli, the brain is spontaneously active. Indeed, most cortical activity is internally generated by recurrence. Both theoretical and experimental studies suggest that chaotic dynamics characterize this spontaneous activity. While the precise function of brain chaotic activity is still puzzling, we know that chaos confers many advantages. From a computational perspective, chaos enhances the complexity of network dynamics. From a behavioural point of view, chaotic activity could generate the variability required for exploration. Furthermore, information storage and transfer are maximized at the critical border between order and chaos. Despite these benefits, many computational brain models avoid incorporating spontaneous chaotic activity due to the challenges it poses for learning algorithms. In recent years, however, multiple approaches have been proposed to overcome this limitation. As a result, many different algorithms have been developed, initially within the reservoir computing paradigm. Over time, the field has evolved to increase the biological plausibility and performance of the algorithms, sometimes going beyond the reservoir computing framework. In this review article, we examine the computational benefits of chaos and the unique properties of chaotic recurrent neural networks, with a particular focus on those typically utilized in reservoir computing. We also provide a detailed analysis of the algorithms designed to train chaotic RNNs, tracing their historical evolution and highlighting key milestones in their development. Finally, we explore the applications and limitations of chaotic RNNs for brain modelling, consider their potential broader impacts beyond neuroscience, and outline promising directions for future research.
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Affiliation(s)
- Andrea Mattera
- Institute of Cognitive Sciences and Technology, National Research Council, Via Romagnosi 18a, I-00196, Rome, Italy.
| | - Valerio Alfieri
- Institute of Cognitive Sciences and Technology, National Research Council, Via Romagnosi 18a, I-00196, Rome, Italy; International School of Advanced Studies, Center for Neuroscience, University of Camerino, Via Gentile III Da Varano, 62032, Camerino, Italy
| | - Giovanni Granato
- Institute of Cognitive Sciences and Technology, National Research Council, Via Romagnosi 18a, I-00196, Rome, Italy
| | - Gianluca Baldassarre
- Institute of Cognitive Sciences and Technology, National Research Council, Via Romagnosi 18a, I-00196, Rome, Italy
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Durstewitz D, Koppe G, Thurm MI. Reconstructing computational system dynamics from neural data with recurrent neural networks. Nat Rev Neurosci 2023; 24:693-710. [PMID: 37794121 DOI: 10.1038/s41583-023-00740-7] [Citation(s) in RCA: 12] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 08/18/2023] [Indexed: 10/06/2023]
Abstract
Computational models in neuroscience usually take the form of systems of differential equations. The behaviour of such systems is the subject of dynamical systems theory. Dynamical systems theory provides a powerful mathematical toolbox for analysing neurobiological processes and has been a mainstay of computational neuroscience for decades. Recently, recurrent neural networks (RNNs) have become a popular machine learning tool for studying the non-linear dynamics of neural and behavioural processes by emulating an underlying system of differential equations. RNNs have been routinely trained on similar behavioural tasks to those used for animal subjects to generate hypotheses about the underlying computational mechanisms. By contrast, RNNs can also be trained on the measured physiological and behavioural data, thereby directly inheriting their temporal and geometrical properties. In this way they become a formal surrogate for the experimentally probed system that can be further analysed, perturbed and simulated. This powerful approach is called dynamical system reconstruction. In this Perspective, we focus on recent trends in artificial intelligence and machine learning in this exciting and rapidly expanding field, which may be less well known in neuroscience. We discuss formal prerequisites, different model architectures and training approaches for RNN-based dynamical system reconstructions, ways to evaluate and validate model performance, how to interpret trained models in a neuroscience context, and current challenges.
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Affiliation(s)
- Daniel Durstewitz
- Dept. of Theoretical Neuroscience, Central Institute of Mental Health, Medical Faculty Mannheim, Heidelberg University, Mannheim, Germany.
- Interdisciplinary Center for Scientific Computing, Heidelberg University, Heidelberg, Germany.
- Faculty of Physics and Astronomy, Heidelberg University, Heidelberg, Germany.
| | - Georgia Koppe
- Dept. of Theoretical Neuroscience, Central Institute of Mental Health, Medical Faculty Mannheim, Heidelberg University, Mannheim, Germany
- Dept. of Psychiatry and Psychotherapy, Central Institute of Mental Health, Medical Faculty Mannheim, Heidelberg University, Mannheim, Germany
- Hector Institute for Artificial Intelligence in Psychiatry, Central Institute of Mental Health, Medical Faculty Mannheim, Heidelberg University, Mannheim, Germany
| | - Max Ingo Thurm
- Dept. of Theoretical Neuroscience, Central Institute of Mental Health, Medical Faculty Mannheim, Heidelberg University, Mannheim, Germany
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Emotional Memory Processing during REM Sleep with Implications for Post-Traumatic Stress Disorder. J Neurosci 2023; 43:433-446. [PMID: 36639913 PMCID: PMC9864570 DOI: 10.1523/jneurosci.1020-22.2022] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/26/2022] [Revised: 11/15/2022] [Accepted: 11/22/2022] [Indexed: 12/14/2022] Open
Abstract
REM sleep is important for the processing of emotional memories, including fear memories. Rhythmic interactions, especially in the theta band, between the medial prefrontal cortex (mPFC) and limbic structures are thought to play an important role, but the ways in which memory processing occurs at a mechanistic and circuits level are largely unknown. To investigate how rhythmic interactions lead to fear extinction during REM sleep, we used a biophysically based model that included the infralimbic cortex (IL), a part of the mPFC with a critical role in suppressing fear memories. Theta frequency (4-12 Hz) inputs to a given cell assembly in IL, representing an emotional memory, resulted in the strengthening of connections from the IL to the amygdala and the weakening of connections from the amygdala to the IL, resulting in the suppression of the activity of fear expression cells for the associated memory. Lower frequency (4 Hz) theta inputs effected these changes over a wider range of input strengths. In contrast, inputs at other frequencies were ineffective at causing these synaptic changes and did not suppress fear memories. Under post-traumatic stress disorder (PTSD) REM sleep conditions, rhythmic activity dissipated, and 4 Hz theta inputs to IL were ineffective, but higher-frequency (10 Hz) theta inputs to IL induced changes similar to those seen with 4 Hz inputs under normal REM sleep conditions, resulting in the suppression of fear expression cells. These results suggest why PTSD patients may repeatedly experience the same emotionally charged dreams and suggest potential neuromodulatory therapies for the amelioration of PTSD symptoms.SIGNIFICANCE STATEMENT Rhythmic interactions in the theta band between the mPFC and limbic structures are thought to play an important role in processing emotional memories, including fear memories, during REM sleep. The infralimbic cortex (IL) in the mPFC is thought to play a critical role in suppressing fear memories. We show that theta inputs to the IL, unlike other frequency inputs, are effective in producing synaptic changes that suppress the activity of fear expression cells associated with a given memory. Under PTSD REM sleep conditions, lower-frequency (4 Hz) theta inputs to the IL do not suppress the activity of fear expression cells associated with the given memory but, surprisingly, 10 Hz inputs do. These results suggest potential neuromodulatory therapies for PTSD.
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Barch DM, Boudewyn MA, Carter CC, Erickson M, Frank MJ, Gold JM, Luck SJ, MacDonald AW, Ragland JD, Ranganath C, Silverstein SM, Yonelinas A. Cognitive [Computational] Neuroscience Test Reliability and Clinical Applications for Serious Mental Illness (CNTRaCS) Consortium: Progress and Future Directions. Curr Top Behav Neurosci 2022; 63:19-60. [PMID: 36173600 DOI: 10.1007/7854_2022_391] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
Abstract
The development of treatments for impaired cognition in schizophrenia has been characterized as the most important challenge facing psychiatry at the beginning of the twenty-first century. The Cognitive Neuroscience Treatment Research to Improve Cognition in Schizophrenia (CNTRICS) project was designed to build on the potential benefits of using tasks and tools from cognitive neuroscience to better understanding and treat cognitive impairments in psychosis. These benefits include: (1) the use of fine-grained tasks that measure discrete cognitive processes; (2) the ability to design tasks that distinguish between specific cognitive domain deficits and poor performance due to generalized deficits resulting from sedation, low motivation, poor test taking skills, etc.; and (3) the ability to link cognitive deficits to specific neural systems, using animal models, neuropsychology, and functional imaging. CNTRICS convened a series of meetings to identify paradigms from cognitive neuroscience that maximize these benefits and identified the steps need for translation into use in clinical populations. The Cognitive Neuroscience Test Reliability and Clinical Applications for Schizophrenia (CNTRaCS) Consortium was developed to help carry out these steps. CNTRaCS consists of investigators at five different sites across the country with diverse expertise relevant to a wide range of the cognitive systems identified as critical as part of CNTRICs. This work reports on the progress and current directions in the evaluation and optimization carried out by CNTRaCS of the tasks identified as part of the original CNTRICs process, as well as subsequent extensions into the Positive Valence systems domain of Research Domain Criteria (RDoC). We also describe the current focus of CNTRaCS, which involves taking a computational psychiatry approach to measuring cognitive and motivational function across the spectrum of psychosis. Specifically, the current iteration of CNTRaCS is using computational modeling to isolate parameters reflecting potentially more specific cognitive and visual processes that may provide greater interpretability in understanding shared and distinct impairments across psychiatric disorders.
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Affiliation(s)
- Deanna M Barch
- Department of Psychological & Brain Sciences, Washington University in St. Louis, St. Louis, MO, USA.
| | | | | | | | | | - James M Gold
- Maryland Psychiatric Research Center, Baltimore, MD, USA
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Trial-to-Trial Variability of Spiking Delay Activity in Prefrontal Cortex Constrains Burst-Coding Models of Working Memory. J Neurosci 2021; 41:8928-8945. [PMID: 34551937 DOI: 10.1523/jneurosci.0167-21.2021] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/22/2021] [Revised: 08/17/2021] [Accepted: 08/29/2021] [Indexed: 11/21/2022] Open
Abstract
A hallmark neuronal correlate of working memory (WM) is stimulus-selective spiking activity of neurons in PFC during mnemonic delays. These observations have motivated an influential computational modeling framework in which WM is supported by persistent activity. Recently, this framework has been challenged by arguments that observed persistent activity may be an artifact of trial-averaging, which potentially masks high variability of delay activity at the single-trial level. In an alternative scenario, WM delay activity could be encoded in bursts of selective neuronal firing which occur intermittently across trials. However, this alternative proposal has not been tested on single-neuron spike-train data. Here, we developed a framework for addressing this issue by characterizing the trial-to-trial variability of neuronal spiking quantified by Fano factor (FF). By building a doubly stochastic Poisson spiking model, we first demonstrated that the burst-coding proposal implies a significant increase in FF positively correlated with firing rate, and thus loss of stability across trials during the delay. Simulation of spiking cortical circuit WM models further confirmed that FF is a sensitive measure that can well dissociate distinct WM mechanisms. We then tested these predictions on datasets of single-neuron recordings from macaque PFC during three WM tasks. In sharp contrast to the burst-coding model predictions, we only found a small fraction of neurons showing increased WM-dependent burstiness, and stability across trials during delay was strengthened in empirical data. Therefore, reduced trial-to-trial variability during delay provides strong constraints on the contribution of single-neuron intermittent bursting to WM maintenance.SIGNIFICANCE STATEMENT There are diverging classes of theoretical models explaining how information is maintained in working memory by cortical circuits. In an influential model class, neurons exhibit persistent elevated memorandum-selective firing, whereas a recently developed class of burst-coding models suggests that persistent activity is an artifact of trial-averaging, and spiking is sparse in each single trial, subserved by brief intermittent bursts. However, this alternative picture has not been characterized or tested on empirical spike-train data. Here we combine mathematical analysis, computational model simulation, and experimental data analysis to test empirically these two classes of models and show that the trial-to-trial variability of empirical spike trains is not consistent with burst coding. These findings provide constraints for theoretical models of working memory.
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Psychiatric Illnesses as Disorders of Network Dynamics. BIOLOGICAL PSYCHIATRY: COGNITIVE NEUROSCIENCE AND NEUROIMAGING 2021; 6:865-876. [DOI: 10.1016/j.bpsc.2020.01.001] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/17/2019] [Accepted: 01/06/2020] [Indexed: 01/05/2023]
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Immunotherapy for GRIN2A and GRIN2D-related epileptic encephalopathy. Epilepsy Res 2020; 163:106325. [PMID: 32289570 DOI: 10.1016/j.eplepsyres.2020.106325] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/01/2019] [Revised: 03/22/2020] [Accepted: 03/26/2020] [Indexed: 12/24/2022]
Abstract
BACKGROUND GRIN-related developmental-epileptic encephalopathies are associated with a spectrum of neurodevelopmental disorders, including intellectual disability, epilepsy including continuous spike-and-wave during sleep syndrome (CSWS), or epilepsy-aphasia spectrum phenotypes such as in Landau-Kleffner syndrome. Efficacy of IVIG treatment was recently reported in a patient with LKS related to GRIN2A mutation. AIM AND METHODS We describe the efficacy of Immunotherapy in 5 consecutive patients (4 males, age range 6 months-13 years) with molecularly confirmed GRIN-related epileptic encephalopathy (4 with GRIN2A- related epilepsy-aphasia spectrum/epileptic encephalopathy with CSWS, accompanied by verbal, communicative and behavioural regression, and one patient with GRIN2D - related infantile developmental-epileptic encephalopathy). All patients had global developmental delay/ intellectual disability in various degrees, and were resistant to anticonvulsants, but none of the patients had frequent clinical seizures. All patients received monthly infusion of IVIG 2 g/ kg for 6 months; 2 patients were also treated with high-dose corticosteroids. RESULTS Normalization or near normalization of the EEG was noted in 3 patients, from whom 2 had mild improvement in verbal abilities and communication skills. Perceptual/spatial abilities, as well as executive functions and attention span, remained significantly impaired. CONCLUSION according to this preliminary, open-label study, Immunotherapy may lead to a clinical and electrographic improvement in patients with GRIN-related developmental-epileptic encephalopathies. Further studies to validate the efficacy of immunotherapy and the potential role of autoimmunity in GRIN-related disorders are needed.
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Liu X, Kuzum D. Hippocampal-Cortical Memory Trace Transfer and Reactivation Through Cell-Specific Stimulus and Spontaneous Background Noise. Front Comput Neurosci 2019; 13:67. [PMID: 31680922 PMCID: PMC6798041 DOI: 10.3389/fncom.2019.00067] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/29/2019] [Accepted: 09/10/2019] [Indexed: 01/07/2023] Open
Abstract
The hippocampus plays important roles in memory formation and retrieval through sharp-wave-ripples. Recent studies have shown that certain neuron populations in the prefrontal cortex (PFC) exhibit coordinated reactivations during awake ripple events. These experimental findings suggest that the awake ripple is an important biomarker, through which the hippocampus interacts with the neocortex to assist memory formation and retrieval. However, the computational mechanisms of this ripple based hippocampal-cortical coordination are still not clear due to the lack of unified models that include both the hippocampal and cortical networks. In this work, using a coupled biophysical model of both CA1 and PFC, we investigate possible mechanisms of hippocampal-cortical memory trace transfer and the conditions that assist reactivation of the transferred memory traces in the PFC. To validate our model, we first show that the local field potentials generated in the hippocampus and PFC exhibit ripple range activities that are consistent with the recent experimental studies. Then we demonstrate that during ripples, sequence replays can successfully transfer the information stored in the hippocampus to the PFC recurrent networks. We investigate possible mechanisms of memory retrieval in PFC networks. Our results suggest that the stored memory traces in the PFC network can be retrieved through two different mechanisms, namely the cell-specific input representing external stimuli and non-specific spontaneous background noise representing spontaneous memory recall events. Importantly, in both cases, the memory reactivation quality is robust to network connection loss. Finally, we find out that the quality of sequence reactivations is enhanced by both increased number of SWRs and an optimal background noise intensity, which tunes the excitability of neurons to a proper level. Our study presents a mechanistic explanation for the memory trace transfer from the hippocampus to neocortex through ripple coupling in awake states and reports two different mechanisms by which the stored memory traces can be successfully retrieved.
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Affiliation(s)
- Xin Liu
- Department of Electrical and Computer Engineering, University of California, San Diego, San Diego, CA, United States
| | - Duygu Kuzum
- Department of Electrical and Computer Engineering, University of California, San Diego, San Diego, CA, United States
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A state space approach for piecewise-linear recurrent neural networks for identifying computational dynamics from neural measurements. PLoS Comput Biol 2017; 13:e1005542. [PMID: 28574992 PMCID: PMC5456035 DOI: 10.1371/journal.pcbi.1005542] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2016] [Accepted: 04/26/2017] [Indexed: 01/21/2023] Open
Abstract
The computational and cognitive properties of neural systems are often thought to be implemented in terms of their (stochastic) network dynamics. Hence, recovering the system dynamics from experimentally observed neuronal time series, like multiple single-unit recordings or neuroimaging data, is an important step toward understanding its computations. Ideally, one would not only seek a (lower-dimensional) state space representation of the dynamics, but would wish to have access to its statistical properties and their generative equations for in-depth analysis. Recurrent neural networks (RNNs) are a computationally powerful and dynamically universal formal framework which has been extensively studied from both the computational and the dynamical systems perspective. Here we develop a semi-analytical maximum-likelihood estimation scheme for piecewise-linear RNNs (PLRNNs) within the statistical framework of state space models, which accounts for noise in both the underlying latent dynamics and the observation process. The Expectation-Maximization algorithm is used to infer the latent state distribution, through a global Laplace approximation, and the PLRNN parameters iteratively. After validating the procedure on toy examples, and using inference through particle filters for comparison, the approach is applied to multiple single-unit recordings from the rodent anterior cingulate cortex (ACC) obtained during performance of a classical working memory task, delayed alternation. Models estimated from kernel-smoothed spike time data were able to capture the essential computational dynamics underlying task performance, including stimulus-selective delay activity. The estimated models were rarely multi-stable, however, but rather were tuned to exhibit slow dynamics in the vicinity of a bifurcation point. In summary, the present work advances a semi-analytical (thus reasonably fast) maximum-likelihood estimation framework for PLRNNs that may enable to recover relevant aspects of the nonlinear dynamics underlying observed neuronal time series, and directly link these to computational properties.
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Fortier PA. Comparison of mechanisms for contrast-invariance of orientation selectivity in simple cells. Neuroscience 2017; 348:41-62. [PMID: 28189612 DOI: 10.1016/j.neuroscience.2017.01.052] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/16/2016] [Revised: 01/29/2017] [Accepted: 01/31/2017] [Indexed: 11/26/2022]
Abstract
The simple cells of the visual cortex respond over a narrow range of stimulus orientations, and this tuning is invariant to the contrast at which the stimulus is presented. The inputs to a single cell derive from a population of thalamic cells that provide a bell-shaped tuning width and offset that increases with stimulus contrast. Synaptic depression, noise and inhibition have been proposed as feedforward mechanisms to explain why these increases do not appear in simple cells. The extent to which these three mechanisms contribute to contrast-invariant orientation tuning is unknown. Consequently, the aim was to test the hypothesis that these mechanisms do not contribute equally. Unlike previous studies, all mechanisms were examined using the same network model based on Banitt et al. (2007). The results showed that thalamocortical synaptic noise was essential and sufficient to widen tuning widths at low contrasts to that of higher contrasts but could not counteract the offset at higher contrasts. Thalamocortical synaptic depression could only be used to counteract a small fraction of the offset otherwise the relationship between contrast and response rate was disrupted. Only broadly tuned simple and complex cell inhibition could counteract the remaining offset for all stimulus contrasts but complex cell inhibition reduced the gain of the response. These results suggest unequal contributions of these feedforward mechanisms with thalamic synaptic noise widening tuning widths for low contrasts, synaptic depression counteracting a small component of the offset and synaptic inhibition completely removing the remaining offset to produce contrast-invariant orientation tuning.
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Affiliation(s)
- Pierre A Fortier
- Dept. Cell. Mol. Medicine, Univ. Ottawa, Ottawa K1H 8M5, Canada.
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Mastwal S, Cao V, Wang KH. Genetic Feedback Regulation of Frontal Cortical Neuronal Ensembles Through Activity-Dependent Arc Expression and Dopaminergic Input. Front Neural Circuits 2016; 10:100. [PMID: 27999532 PMCID: PMC5138219 DOI: 10.3389/fncir.2016.00100] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2016] [Accepted: 11/23/2016] [Indexed: 12/15/2022] Open
Abstract
Mental functions involve coordinated activities of specific neuronal ensembles that are embedded in complex brain circuits. Aberrant neuronal ensemble dynamics is thought to form the neurobiological basis of mental disorders. A major challenge in mental health research is to identify these cellular ensembles and determine what molecular mechanisms constrain their emergence and consolidation during development and learning. Here, we provide a perspective based on recent studies that use activity-dependent gene Arc/Arg3.1 as a cellular marker to identify neuronal ensembles and a molecular probe to modulate circuit functions. These studies have demonstrated that the transcription of Arc is activated in selective groups of frontal cortical neurons in response to specific behavioral tasks. Arc expression regulates the persistent firing of individual neurons and predicts the consolidation of neuronal ensembles during repeated learning. Therefore, the Arc pathway represents a prototypical example of activity-dependent genetic feedback regulation of neuronal ensembles. The activation of this pathway in the frontal cortex starts during early postnatal development and requires dopaminergic (DA) input. Conversely, genetic disruption of Arc leads to a hypoactive mesofrontal dopamine circuit and its related cognitive deficit. This mutual interaction suggests an auto-regulatory mechanism to amplify the impact of neuromodulators and activity-regulated genes during postnatal development. Such a mechanism may contribute to the association of mutations in dopamine and Arc pathways with neurodevelopmental psychiatric disorders. As the mesofrontal dopamine circuit shows extensive activity-dependent developmental plasticity, activity-guided modulation of DA projections or Arc ensembles during development may help to repair circuit deficits related to neuropsychiatric disorders.
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Affiliation(s)
- Surjeet Mastwal
- Unit on Neural Circuits and Adaptive Behaviors, Clinical and Translational Neuroscience Branch, National Institute of Mental Health Bethesda, MD, USA
| | - Vania Cao
- Unit on Neural Circuits and Adaptive Behaviors, Clinical and Translational Neuroscience Branch, National Institute of Mental Health Bethesda, MD, USA
| | - Kuan Hong Wang
- Unit on Neural Circuits and Adaptive Behaviors, Clinical and Translational Neuroscience Branch, National Institute of Mental Health Bethesda, MD, USA
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Mendonça PR, Vargas-Caballero M, Erdélyi F, Szabó G, Paulsen O, Robinson HP. Stochastic and deterministic dynamics of intrinsically irregular firing in cortical inhibitory interneurons. eLife 2016; 5. [PMID: 27536875 PMCID: PMC5030087 DOI: 10.7554/elife.16475] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/29/2016] [Accepted: 08/17/2016] [Indexed: 11/24/2022] Open
Abstract
Most cortical neurons fire regularly when excited by a constant stimulus. In contrast, irregular-spiking (IS) interneurons are remarkable for the intrinsic variability of their spike timing, which can synchronize amongst IS cells via specific gap junctions. Here, we have studied the biophysical mechanisms of this irregular spiking in mice, and how IS cells fire in the context of synchronous network oscillations. Using patch-clamp recordings, artificial dynamic conductance injection, pharmacological analysis and computational modeling, we show that spike time irregularity is generated by a nonlinear dynamical interaction of voltage-dependent sodium and fast-inactivating potassium channels just below spike threshold, amplifying channel noise. This active irregularity may help IS cells synchronize with each other at gamma range frequencies, while resisting synchronization to lower input frequencies. DOI:http://dx.doi.org/10.7554/eLife.16475.001 Neurons send information to other neurons in the brain by generating fast electrical pulses called action potentials (or spikes). When stimulated by input signals of a constant size, neurons generally respond with regular patterns of spiking leading to rhythmical brain activity. However, neurons known as irregular spiking interneurons are unique: the relationship between the input they receive and whether or not they produce a spike appears to be random. The molecular mechanism behind this phenomenon is not clear. Mendonça et al. set out to investigate whether irregular spiking is truly random, or whether there is some degree of predictability. The experiments used genetically modified mice in which irregular spiking interneurons were specifically labeled with a fluorescent protein, which made them easier to find to record their electrical activity. Sophisticated statistical analyses showed that these neurons are not firing at random. Instead, there is a pattern to the timings of the spikes they produce. It was previously known that electrical spikes in neurons are generated by sodium ions and potassium ions moving across the membrane that surrounds each cell. Proteins called ion channels provide routes for these ions to pass through the membrane. Mendonça et al. show that compared to other neurons, irregular spiking interneurons have larger numbers of a specific type of potassium ion channel. Mimicking the effect of increasing the number of these potassium ion channels in the interneurons made the firing pattern of these neurons more irregular, while decreasing the number of these channels made the firing patterns more regular and predictable. A computer model of an irregular spiking interneuron showed that the activity of these potassium ion channels and a type of sodium ion channel plays a key role in producing irregular electrical spiking. Further analysis showed that irregular spiking interneurons can synchronize their activity with fast, but not slow, rhythms in brain activity. The findings of Mendonça et al. suggest that irregular spiking interneurons can disrupt slow regular electrical activity in the brain. Rhythms in brain activity vary depending on whether we are awake or asleep, and are altered in diseases such as epilepsy and schizophrenia. Now that we have a better understanding of how irregular spiking interneurons work, it should be possible to find out how they coordinate their activity with each other, and what effect they have on animal behavior. DOI:http://dx.doi.org/10.7554/eLife.16475.002
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Affiliation(s)
- Philipe Rf Mendonça
- Department of Physiology, Development and Neuroscience, University of Cambridge, Cambridge, United Kingdom
| | - Mariana Vargas-Caballero
- Institute for Life Sciences, University of Southampton, Southampton, United Kingdom.,Centre for Biological Sciences, University of Southampton, Southampton, United Kingdom
| | - Ferenc Erdélyi
- Division of Medical Gene Technology, Institute of Experimental Medicine, Budapest, Hungary
| | - Gábor Szabó
- Division of Medical Gene Technology, Institute of Experimental Medicine, Budapest, Hungary
| | - Ole Paulsen
- Department of Physiology, Development and Neuroscience, University of Cambridge, Cambridge, United Kingdom
| | - Hugh Pc Robinson
- Department of Physiology, Development and Neuroscience, University of Cambridge, Cambridge, United Kingdom
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Hertäg L, Durstewitz D, Brunel N. Analytical approximations of the firing rate of an adaptive exponential integrate-and-fire neuron in the presence of synaptic noise. Front Comput Neurosci 2014; 8:116. [PMID: 25278872 PMCID: PMC4167001 DOI: 10.3389/fncom.2014.00116] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/28/2014] [Accepted: 08/31/2014] [Indexed: 11/17/2022] Open
Abstract
Computational models offer a unique tool for understanding the network-dynamical mechanisms which mediate between physiological and biophysical properties, and behavioral function. A traditional challenge in computational neuroscience is, however, that simple neuronal models which can be studied analytically fail to reproduce the diversity of electrophysiological behaviors seen in real neurons, while detailed neuronal models which do reproduce such diversity are intractable analytically and computationally expensive. A number of intermediate models have been proposed whose aim is to capture the diversity of firing behaviors and spike times of real neurons while entailing the simplest possible mathematical description. One such model is the exponential integrate-and-fire neuron with spike rate adaptation (aEIF) which consists of two differential equations for the membrane potential (V) and an adaptation current (w). Despite its simplicity, it can reproduce a wide variety of physiologically observed spiking patterns, can be fit to physiological recordings quantitatively, and, once done so, is able to predict spike times on traces not used for model fitting. Here we compute the steady-state firing rate of aEIF in the presence of Gaussian synaptic noise, using two approaches. The first approach is based on the 2-dimensional Fokker-Planck equation that describes the (V,w)-probability distribution, which is solved using an expansion in the ratio between the time constants of the two variables. The second is based on the firing rate of the EIF model, which is averaged over the distribution of the w variable. These analytically derived closed-form expressions were tested on simulations from a large variety of model cells quantitatively fitted to in vitro electrophysiological recordings from pyramidal cells and interneurons. Theoretical predictions closely agreed with the firing rate of the simulated cells fed with in-vivo-like synaptic noise.
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Affiliation(s)
- Loreen Hertäg
- Department Theoretical Neuroscience, Bernstein-Center for Computational Neuroscience, Central Institute of Mental Health, Medical Faculty Mannheim/Heidelberg University Mannheim, Germany
| | - Daniel Durstewitz
- Department Theoretical Neuroscience, Bernstein-Center for Computational Neuroscience, Central Institute of Mental Health, Medical Faculty Mannheim/Heidelberg University Mannheim, Germany ; Faculty of Science and Environment, School of Computing and Mathematics, Plymouth University Plymouth, UK
| | - Nicolas Brunel
- Departments of Statistics and Neurobiology, University of Chicago Chicago, IL, USA
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Abstract
The clinical symptoms and cognitive and functional deficits of schizophrenia typically begin to gradually emerge during late adolescence and early adulthood. Recent findings suggest that disturbances of a specific subset of inhibitory neurons that contain the calcium-binding protein parvalbumin (PV), which may regulate the course of postnatal developmental experience-dependent synaptic plasticity in the cerebral cortex, including the prefrontal cortex (PFC), may be involved in the pathogenesis of the onset of this illness. Specifically, converging lines of evidence suggest that oxidative stress, extracellular matrix (ECM) deficit and impaired glutamatergic innervation may contribute to the functional impairment of PV neurons, which may then lead to aberrant developmental synaptic pruning of pyramidal cell circuits during adolescence in the PFC. In addition to promoting the functional integrity of PV neurons, maturation of ECM may also play an instrumental role in the termination of developmental PFC synaptic pruning; thus, ECM deficit can directly lead to excessive loss of synapses by prolonging the course of pruning. Together, these mechanisms may contribute to the onset of schizophrenia by compromising the integrity, stability, and fidelity of PFC connectional architecture that is necessary for reliable and predictable information processing. As such, further characterization of these mechanisms will have implications for the conceptualization of rational strategies for the diagnosis, early intervention, and prevention of this debilitating disorder.
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Affiliation(s)
- Tsung-Ung W Woo
- Laboratory of Cellular Neuropathology, MRC303E, McLean Hospital, 115 Mill Street, Belmont, MA, 02478, USA,
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15
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Abstract
The brain encodes information about past experience in specific populations of neurons that communicate with one another by firing action potentials. Studies of experience-dependent neural plasticity have largely focused on individual synaptic changes in response to neuronal input. Indicative of the neuronal output transmitted to downstream neurons, persistent firing patterns are affected by prior experience in selective neuronal populations. However, little is known about the molecular and cellular mechanisms by which experience-related persistent firing patterns are regulated in specific neuronal populations. Using frontal cortical slices prepared from transgenic mice carrying a fluorescent reporter of Arc gene expression, this study investigates how behavioral experience and the activity-regulated Arc gene affect patterns of neuronal firing. We found that motor training increases Arc expression in subsets of excitatory neurons. Those neurons exhibit persistent firing in contrast to Arc-negative neurons from the same mice or neurons from the untrained mice. Furthermore, in mice carrying genetic deletion of Arc, the frontal cortical circuitry is still in place to initiate experience-dependent gene expression, but the level of persistent firing thereafter is diminished. Finally, our results showed that the emergence of persistent activity is associated with Arc-dependent changes in the function of NMDA-type glutamate receptors, rather than changes in AMPA-type receptors or membrane excitability. Our findings therefore reveal an Arc-dependent molecular pathway by which gene-experience interaction regulates the emergence of persistent firing patterns in specific neuronal populations.
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16
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Memory retrieval in response to partial cues requires NMDA receptor-dependent neurotransmission in the medial prefrontal cortex. Neurobiol Learn Mem 2014; 109:20-6. [DOI: 10.1016/j.nlm.2013.11.004] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/16/2013] [Revised: 10/16/2013] [Accepted: 11/05/2013] [Indexed: 12/29/2022]
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17
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Papoutsi A, Sidiropoulou K, Cutsuridis V, Poirazi P. Induction and modulation of persistent activity in a layer V PFC microcircuit model. Front Neural Circuits 2013; 7:161. [PMID: 24130519 PMCID: PMC3793128 DOI: 10.3389/fncir.2013.00161] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/24/2013] [Accepted: 09/19/2013] [Indexed: 12/02/2022] Open
Abstract
Working memory refers to the temporary storage of information and is strongly associated with the prefrontal cortex (PFC). Persistent activity of cortical neurons, namely the activity that persists beyond the stimulus presentation, is considered the cellular correlate of working memory. Although past studies suggested that this type of activity is characteristic of large scale networks, recent experimental evidence imply that small, tightly interconnected clusters of neurons in the cortex may support similar functionalities. However, very little is known about the biophysical mechanisms giving rise to persistent activity in small-sized microcircuits in the PFC. Here, we present a detailed biophysically—yet morphologically simplified—microcircuit model of layer V PFC neurons that incorporates connectivity constraints and is validated against a multitude of experimental data. We show that (a) a small-sized network can exhibit persistent activity under realistic stimulus conditions. (b) Its emergence depends strongly on the interplay of dADP, NMDA, and GABAB currents. (c) Although increases in stimulus duration increase the probability of persistent activity induction, variability in the stimulus firing frequency does not consistently influence it. (d) Modulation of ionic conductances (Ih, ID, IsAHP, IcaL, IcaN, IcaR) differentially controls persistent activity properties in a location dependent manner. These findings suggest that modulation of the microcircuit's firing characteristics is achieved primarily through changes in its intrinsic mechanism makeup, supporting the hypothesis of multiple bi-stable units in the PFC. Overall, the model generates a number of experimentally testable predictions that may lead to a better understanding of the biophysical mechanisms of persistent activity induction and modulation in the PFC.
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Affiliation(s)
- Athanasia Papoutsi
- Institute of Molecular Biology and Biotechnology, Foundation for Research and Technology-Hellas Heraklion, Greece ; Department of Biology, University of Crete Heraklion, Crete, Greece
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18
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Pendyam S, Bravo-Rivera C, Burgos-Robles A, Sotres-Bayon F, Quirk GJ, Nair SS. Fear signaling in the prelimbic-amygdala circuit: a computational modeling and recording study. J Neurophysiol 2013; 110:844-61. [PMID: 23699055 PMCID: PMC3742978 DOI: 10.1152/jn.00961.2012] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/05/2012] [Accepted: 05/17/2013] [Indexed: 11/22/2022] Open
Abstract
The acquisition and expression of conditioned fear depends on prefrontal-amygdala circuits. Auditory fear conditioning increases the tone responses of lateral amygdala neurons, but the increase is transient, lasting only a few hundred milliseconds after tone onset. It was recently reported that that the prelimbic (PL) prefrontal cortex transforms transient lateral amygdala input into a sustained PL output, which could drive fear responses via projections to the lateral division of basal amygdala (BL). To explore the possible mechanisms involved in this transformation, we developed a large-scale biophysical model of the BL-PL network, consisting of 850 conductance-based Hodgkin-Huxley-type cells, calcium-based learning, and neuromodulator effects. The model predicts that sustained firing in PL can be derived from BL-induced release of dopamine and norepinephrine that is maintained by PL-BL interconnections. These predictions were confirmed with physiological recordings from PL neurons during fear conditioning with the selective β-blocker propranolol and by inactivation of BL with muscimol. Our model suggests that PL has a higher bandwidth than BL, due to PL's decreased internal inhibition and lower spiking thresholds. It also suggests that variations in specific microcircuits in the PL-BL interconnection can have a significant impact on the expression of fear, possibly explaining individual variability in fear responses. The human homolog of PL could thus be an effective target for anxiety disorders.
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Affiliation(s)
- Sandeep Pendyam
- Department of Electrical and Computer Engineering, University of Missouri, Columbia, Missouri 65211, USA
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19
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Papoutsi A, Petrantonakis PC, Poirazi P. Dendritic nonlinearities enable PFC microcircuits to serve as predictive modules of persistent activity. BMC Neurosci 2013. [PMCID: PMC3704699 DOI: 10.1186/1471-2202-14-s1-p319] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022] Open
Affiliation(s)
- Athanasia Papoutsi
- Institute of Molecular Biology and Biotechnology, Foundation for Research and Technology, Heraklion, Crete, 70013, Greece,Department of Biology, University of Crete, Heraklion, Crete, 71409, Greece
| | - Panagiotis C Petrantonakis
- Institute of Molecular Biology and Biotechnology, Foundation for Research and Technology, Heraklion, Crete, 70013, Greece
| | - Panayiota Poirazi
- Institute of Molecular Biology and Biotechnology, Foundation for Research and Technology, Heraklion, Crete, 70013, Greece
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20
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Control of bursting behavior in neurons by autaptic modulation. Neurol Sci 2013; 34:1977-84. [PMID: 23595543 DOI: 10.1007/s10072-013-1429-2] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/12/2013] [Accepted: 03/28/2013] [Indexed: 10/27/2022]
Abstract
Firing properties of biological neurons have long been recognized to be determined by extrinsic synaptic afferents that neurons receive and intrinsic ionic mechanisms that neurons possess, however, previous researches have also demonstrated that firing behavior of single neurons can be modulated by the neurons themselves, realized by the autapses. Thus in this investigation, we argued that how autaptic modulations shape the bursting behavior of biological neurons. We considered the issue from the following two aspects: autaptic-excitation and -inhibition. Our results suggested that for autaptic-excitation, under the condition of relatively weak stimulus, regular bursting was more incline to occur when the autaptic strength was weak, while regular spiking was more likely to appear when the autaptic strength was strong. However, larger stimulus would diminish the portion of bursting, but increase the portion of spiking. For autaptic-inhibition, under relatively weak stimulus, a wide range of regular bursting emerges when the autaptic strength was small, but when stronger stimulus were applied, the range of regular bursting shrinked into a small region. Meanwhile, we observed that synaptic delays have no obvious effects in the case of autaptic-excitation, while a subtle effect of synaptic delays was observed in the case of autaptic-inhibition. These results showed that bursting behavior of neurons could be controlled and modulated by the autaptic mechanisms that biological neurons intrinsically possess, and the final results may further promote the understanding in the generation of various neuronal firing patterns.
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21
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Hansel D, Mato G. Short-term plasticity explains irregular persistent activity in working memory tasks. J Neurosci 2013; 33:133-49. [PMID: 23283328 PMCID: PMC6618646 DOI: 10.1523/jneurosci.3455-12.2013] [Citation(s) in RCA: 77] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/19/2012] [Revised: 10/24/2012] [Accepted: 10/26/2012] [Indexed: 11/21/2022] Open
Abstract
Persistent activity in cortex is the neural correlate of working memory (WM). In persistent activity, spike trains are highly irregular, even more than in baseline. This seemingly innocuous feature challenges our current understanding of the synaptic mechanisms underlying WM. Here we argue that in WM the prefrontal cortex (PFC) operates in a regime of balanced excitation and inhibition and that the observed temporal irregularity reflects this regime. We show that this requires that nonlinearities underlying the persistent activity are primarily in the neuronal interactions between PFC neurons. We also show that short-term synaptic facilitation can be the physiological substrate of these nonlinearities and that the resulting mechanism of balanced persistent activity is robust, in particular with respect to changes in the connectivity. As an example, we put forward a computational model of the PFC circuit involved in oculomotor delayed response task. The novelty of this model is that recurrent excitatory synapses are facilitating. We demonstrate that this model displays direction-selective persistent activity. We find that, even though the memory eventually degrades because of the heterogeneities, it can be stored for several seconds for plausible network size and connectivity. This model accounts for a large number of experimental findings, such as the findings that have shown that firing is more irregular during the persistent state than during baseline, that the neuronal responses are very diverse, and that the preferred directions during cue and delay periods are strongly correlated but tuning widths are not.
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Affiliation(s)
- David Hansel
- Laboratory of Neurophysics and Physiology and Institute of Neuroscience and Cognition, University Paris Descartes, 75270 Paris Cedex 06, France, and
| | - German Mato
- Comisión Nacional de Energía Atómica and Consejo Nacional de Investigaciones Cientificas y Técnicas, Centro Atómico Bariloche and Instituto Balseiro, 8400 San Carlos de Bariloche, Argentina
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22
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Hertäg L, Hass J, Golovko T, Durstewitz D. An Approximation to the Adaptive Exponential Integrate-and-Fire Neuron Model Allows Fast and Predictive Fitting to Physiological Data. Front Comput Neurosci 2012; 6:62. [PMID: 22973220 PMCID: PMC3434419 DOI: 10.3389/fncom.2012.00062] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/26/2012] [Accepted: 08/03/2012] [Indexed: 11/13/2022] Open
Abstract
For large-scale network simulations, it is often desirable to have computationally tractable, yet in a defined sense still physiologically valid neuron models. In particular, these models should be able to reproduce physiological measurements, ideally in a predictive sense, and under different input regimes in which neurons may operate in vivo. Here we present an approach to parameter estimation for a simple spiking neuron model mainly based on standard f-I curves obtained from in vitro recordings. Such recordings are routinely obtained in standard protocols and assess a neuron's response under a wide range of mean-input currents. Our fitting procedure makes use of closed-form expressions for the firing rate derived from an approximation to the adaptive exponential integrate-and-fire (AdEx) model. The resulting fitting process is simple and about two orders of magnitude faster compared to methods based on numerical integration of the differential equations. We probe this method on different cell types recorded from rodent prefrontal cortex. After fitting to the f-I current-clamp data, the model cells are tested on completely different sets of recordings obtained by fluctuating ("in vivo-like") input currents. For a wide range of different input regimes, cell types, and cortical layers, the model could predict spike times on these test traces quite accurately within the bounds of physiological reliability, although no information from these distinct test sets was used for model fitting. Further analyses delineated some of the empirical factors constraining model fitting and the model's generalization performance. An even simpler adaptive LIF neuron was also examined in this context. Hence, we have developed a "high-throughput" model fitting procedure which is simple and fast, with good prediction performance, and which relies only on firing rate information and standard physiological data widely and easily available.
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Affiliation(s)
- Loreen Hertäg
- Bernstein-Center for Computational Neuroscience, Central Institute of Mental Health, Psychiatry, Medical Faculty Mannheim of Heidelberg UniversityMannheim, Germany
| | - Joachim Hass
- Bernstein-Center for Computational Neuroscience, Central Institute of Mental Health, Psychiatry, Medical Faculty Mannheim of Heidelberg UniversityMannheim, Germany
| | - Tatiana Golovko
- Bernstein-Center for Computational Neuroscience, Central Institute of Mental Health, Psychiatry, Medical Faculty Mannheim of Heidelberg UniversityMannheim, Germany
| | - Daniel Durstewitz
- Bernstein-Center for Computational Neuroscience, Central Institute of Mental Health, Psychiatry, Medical Faculty Mannheim of Heidelberg UniversityMannheim, Germany
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23
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Predictive features of persistent activity emergence in regular spiking and intrinsic bursting model neurons. PLoS Comput Biol 2012; 8:e1002489. [PMID: 22570601 PMCID: PMC3343116 DOI: 10.1371/journal.pcbi.1002489] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/20/2011] [Accepted: 03/08/2012] [Indexed: 11/19/2022] Open
Abstract
Proper functioning of working memory involves the expression of stimulus-selective persistent activity in pyramidal neurons of the prefrontal cortex (PFC), which refers to neural activity that persists for seconds beyond the end of the stimulus. The mechanisms which PFC pyramidal neurons use to discriminate between preferred vs. neutral inputs at the cellular level are largely unknown. Moreover, the presence of pyramidal cell subtypes with different firing patterns, such as regular spiking and intrinsic bursting, raises the question as to what their distinct role might be in persistent firing in the PFC. Here, we use a compartmental modeling approach to search for discriminatory features in the properties of incoming stimuli to a PFC pyramidal neuron and/or its response that signal which of these stimuli will result in persistent activity emergence. Furthermore, we use our modeling approach to study cell-type specific differences in persistent activity properties, via implementing a regular spiking (RS) and an intrinsic bursting (IB) model neuron. We identify synaptic location within the basal dendrites as a feature of stimulus selectivity. Specifically, persistent activity-inducing stimuli consist of activated synapses that are located more distally from the soma compared to non-inducing stimuli, in both model cells. In addition, the action potential (AP) latency and the first few inter-spike-intervals of the neuronal response can be used to reliably detect inducing vs. non-inducing inputs, suggesting a potential mechanism by which downstream neurons can rapidly decode the upcoming emergence of persistent activity. While the two model neurons did not differ in the coding features of persistent activity emergence, the properties of persistent activity, such as the firing pattern and the duration of temporally-restricted persistent activity were distinct. Collectively, our results pinpoint to specific features of the neuronal response to a given stimulus that code for its ability to induce persistent activity and predict differential roles of RS and IB neurons in persistent activity expression. Memory, referred to as the ability to retain, store and recall information, represents one of the most fundamental cognitive functions in daily life. A significant feature of memory processes is selectivity to particular events or items that are important to our survival and relevant to specific situations. For long-term memory, the selectivity to a specific stimulus is seen both at the behavioral as well as the cellular level. For working memory, a type of short-term memory involved in decision making and attention processes, stimulus selectivity has been observed in vivo using spatial working memory tasks. In addition, persistent activity, which is the cellular correlate of working memory, is also selective to specific stimuli for each neuron, suggesting that each neuron has a ‘memory field’. Our study proposes that both the location of incoming inputs onto the neuronal dendritic tree and specific temporal features of the neuronal response can be used to predict the emergence of persistent activity in two neuron models with different firing patterns, revealing possible mechanisms for generating and propagating stimulus-selectivity in working memory processes. The study also reveals that neurons with different firing patterns may have different roles in persistent activity expression.
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24
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Sheynikhovich D, Otani S, Arleo A. The role of tonic and phasic dopamine for long-term synaptic plasticity in the prefrontal cortex: a computational model. ACTA ACUST UNITED AC 2011; 105:45-52. [PMID: 21911057 DOI: 10.1016/j.jphysparis.2011.08.001] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/02/2011] [Revised: 08/03/2011] [Accepted: 08/22/2011] [Indexed: 01/26/2023]
Abstract
This work presents a computational model of dopamine (DA) influence on long-term potentiation (LTP) and long-term depression (LTD) in the prefrontal cortex. Distinct properties of the model are a DA-concentration-dependent switch from depression to potentiation during induction of plasticity, and an inverted-U-shaped dependence of protein synthesis on the level of background DA. Protein synthesis is responsible for the maintenance of LTP/LTD in the model. Our simulations suggest that in vitro experimental data on prefrontal plasticity, induced by high-frequency stimulation, may be accounted for by a single synaptic mechanism that is slowly (on the timescale of minutes) activated in the presence of DA in a concentration-dependent manner. The activation value determines the direction of plasticity during induction, while it also modulates the magnitude of plasticity during maintenance. More generally, our results support the hypothesis that phasic release of endogenous DA is necessary for the maintenance of long-term changes in synaptic efficacy, while the concentration of tonic DA determines the direction and magnitude of these changes in the PFC.
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Affiliation(s)
- Denis Sheynikhovich
- Laboratory of Neurobiology of Adaptive Processes, CNRS-UMR7102, UPMC-Paris 6, 9 Quai St. Bernard, F-75005 Paris, France.
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25
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Chorley P, Seth AK. Dopamine-signaled reward predictions generated by competitive excitation and inhibition in a spiking neural network model. Front Comput Neurosci 2011; 5:21. [PMID: 21629770 PMCID: PMC3099399 DOI: 10.3389/fncom.2011.00021] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2010] [Accepted: 04/26/2011] [Indexed: 11/13/2022] Open
Abstract
Dopaminergic neurons in the mammalian substantia nigra display characteristic phasic responses to stimuli which reliably predict the receipt of primary rewards. These responses have been suggested to encode reward prediction-errors similar to those used in reinforcement learning. Here, we propose a model of dopaminergic activity in which prediction-error signals are generated by the joint action of short-latency excitation and long-latency inhibition, in a network undergoing dopaminergic neuromodulation of both spike-timing dependent synaptic plasticity and neuronal excitability. In contrast to previous models, sensitivity to recent events is maintained by the selective modification of specific striatal synapses, efferent to cortical neurons exhibiting stimulus-specific, temporally extended activity patterns. Our model shows, in the presence of significant background activity, (i) a shift in dopaminergic response from reward to reward-predicting stimuli, (ii) preservation of a response to unexpected rewards, and (iii) a precisely timed below-baseline dip in activity observed when expected rewards are omitted.
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Affiliation(s)
- Paul Chorley
- Neurodynamics and Consciousness Laboratory, School of Informatics, University of Sussex Brighton, UK
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26
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Pissadaki EK, Sidiropoulou K, Reczko M, Poirazi P. Encoding of spatio-temporal input characteristics by a CA1 pyramidal neuron model. PLoS Comput Biol 2010; 6:e1001038. [PMID: 21187899 PMCID: PMC3002985 DOI: 10.1371/journal.pcbi.1001038] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/24/2010] [Accepted: 11/19/2010] [Indexed: 11/26/2022] Open
Abstract
The in vivo activity of CA1 pyramidal neurons alternates between regular spiking and bursting, but how these changes affect information processing remains unclear. Using a detailed CA1 pyramidal neuron model, we investigate how timing and spatial arrangement variations in synaptic inputs to the distal and proximal dendritic layers influence the information content of model responses. We find that the temporal delay between activation of the two layers acts as a switch between excitability modes: short delays induce bursting while long delays decrease firing. For long delays, the average firing frequency of the model response discriminates spatially clustered from diffused inputs to the distal dendritic tree. For short delays, the onset latency and inter-spike-interval succession of model responses can accurately classify input signals as temporally close or distant and spatially clustered or diffused across different stimulation protocols. These findings suggest that a CA1 pyramidal neuron may be capable of encoding and transmitting presynaptic spatiotemporal information about the activity of the entorhinal cortex-hippocampal network to higher brain regions via the selective use of either a temporal or a rate code. Pyramidal neurons in the hippocampus are crucially involved in learning and memory functions, but the ways in which they contribute to the processing of sensory inputs and their internal representation remain mostly unclear. The principal neurons of the CA1 region of the hippocampus are surrounded by at least 21 different types of interneurons. This feature, together with the fact that CA1 pyramidal dendrites associate two major glutamatergic inputs arriving from the entorhinal cortex, makes it laborious to track the ‘how’ and ‘what’ of synaptic integration. The present study tries to shed light on the ‘what’, that is, the information content of the CA1 discharge pattern. Using a detailed biophysical CA1 neuron model, we show that the output of the model neuron contains spatial and temporal features of the incoming synaptic input. This information lies in the temporal pattern of the inter-spike intervals produced during the bursting activity which is induced by the temporal coincidence of the two activated synaptic streams. Our findings suggest that CA1 pyramidal neurons may be capable of capturing features of the ongoing network activity via the use of a temporal code for information transfer.
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Affiliation(s)
- Eleftheria Kyriaki Pissadaki
- Department of Biology, University of Crete, Heraklion, Crete, Greece
- Institute of Molecular Biology and Biotechnology, Foundation for Research and Technology, Heraklion, Crete, Greece
- * E-mail: (EKP); (PP)
| | - Kyriaki Sidiropoulou
- Institute of Molecular Biology and Biotechnology, Foundation for Research and Technology, Heraklion, Crete, Greece
| | - Martin Reczko
- Institute of Molecular Oncology, Alexander Fleming Biomedical Sciences Research Center, Athens, Greece
| | - Panayiota Poirazi
- Institute of Molecular Biology and Biotechnology, Foundation for Research and Technology, Heraklion, Crete, Greece
- * E-mail: (EKP); (PP)
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27
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Chen W, Li X, Pu J, Luo Q. Spatial-temporal dynamics of chaotic behavior in cultured hippocampal networks. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2010; 81:061903. [PMID: 20866436 DOI: 10.1103/physreve.81.061903] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/17/2009] [Revised: 03/25/2010] [Indexed: 05/25/2023]
Abstract
Using multiple nonlinear techniques, we revealed the existence of chaos in the spontaneous activity of neuronal networks in vitro. The spatial-temporal dynamics of these networks indicated that emergent transition between chaotic behavior and superburst occurred periodically in low-frequency oscillations. An analysis of network-wide activity indicated that chaos was synchronized among different sites. Moreover, we found that the degree of chaos increased as the number of active sites in the network increased during long-term development (over three months in vitro). The chaotic behavior of the dissociated networks had similar spatial-temporal characteristics (rapid transition, periodicity, and synchronization) as the intact brain; however, the degree of chaos depended on the number of active sites at the mesoscopic level. This work could provide insight into neural coding and neurocybernetics.
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Affiliation(s)
- Wenjuan Chen
- Britton Chance Center for Biomedical Photonics, Wuhan National Laboratory for Optoelectronics, Huazhong University of Science and Technology, Wuhan, Hubei 430074, China
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28
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Searching for autocoherence in the cortical network with a time-frequency analysis of the local field potential. J Neurosci 2010; 30:4033-47. [PMID: 20237274 DOI: 10.1523/jneurosci.5319-09.2010] [Citation(s) in RCA: 50] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
Gamma-band peaks in the power spectrum of local field potentials (LFP) are found in multiple brain regions. It has been theorized that gamma oscillations may serve as a 'clock' signal for the purposes of precise temporal encoding of information and 'binding' of stimulus features across regions of the brain. Neurons in model networks may exhibit periodic spike firing or synchronized membrane potentials that give rise to a gamma-band oscillation that could operate as a 'clock'. The phase of the oscillation in such models is conserved over the length of the stimulus. We define these types of oscillations to be 'autocoherent'. We investigated the hypothesis that autocoherent oscillations are the basis of the experimentally observed gamma-band peaks: the autocoherent oscillator (ACO) hypothesis. To test the ACO hypothesis, we developed a new technique to analyze the autocoherence of a time-varying signal. This analysis used the continuous Gabor transform to examine the time evolution of the phase of each frequency component in the power spectrum. Using this analysis method, we formulated a statistical test to compare the ACO hypothesis with measurements of the LFP in macaque primary visual cortex, V1. The experimental data were not consistent with the ACO hypothesis. Gamma-band activity recorded in V1 did not have the properties of a 'clock' signal during visual stimulation. We propose instead that the source of the gamma-band spectral peak is the resonant V1 network driven by random inputs.
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29
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Kroener S, Chandler LJ, Phillips PEM, Seamans JK. Dopamine modulates persistent synaptic activity and enhances the signal-to-noise ratio in the prefrontal cortex. PLoS One 2009; 4:e6507. [PMID: 19654866 PMCID: PMC2715878 DOI: 10.1371/journal.pone.0006507] [Citation(s) in RCA: 123] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/04/2009] [Accepted: 07/11/2009] [Indexed: 11/19/2022] Open
Abstract
Background The importance of dopamine (DA) for prefrontal cortical (PFC) cognitive functions is widely recognized, but its mechanisms of action remain controversial. DA is thought to increase signal gain in active networks according to an inverted U dose-response curve, and these effects may depend on both tonic and phasic release of DA from midbrain ventral tegmental area (VTA) neurons. Methodology/Principal Findings We used patch-clamp recordings in organotypic co-cultures of the PFC, hippocampus and VTA to study DA modulation of spontaneous network activity in the form of Up-states and signals in the form of synchronous EPSP trains. These cultures possessed a tonic DA level and stimulation of the VTA evoked DA transients within the PFC. The addition of high (≥1 µM) concentrations of exogenous DA to the cultures reduced Up-states and diminished excitatory synaptic inputs (EPSPs) evoked during the Down-state. Increasing endogenous DA via bath application of cocaine also reduced Up-states. Lower concentrations of exogenous DA (0.1 µM) had no effect on the up-state itself, but they selectively increased the efficiency of a train of EPSPs to evoke spikes during the Up-state. When the background DA was eliminated by depleting DA with reserpine and alpha-methyl-p-tyrosine, or by preparing corticolimbic co-cultures without the VTA slice, Up-states could be enhanced by low concentrations (0.1–1 µM) of DA that had no effect in the VTA containing cultures. Finally, in spite of the concentration-dependent effects on Up-states, exogenous DA at all but the lowest concentrations increased intracellular current-pulse evoked firing in all cultures underlining the complexity of DA's effects in an active network. Conclusions/Significance Taken together, these data show concentration-dependent effects of DA on global PFC network activity and they demonstrate a mechanism through which optimal levels of DA can modulate signal gain to support cognitive functioning.
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Affiliation(s)
- Sven Kroener
- Department of Neurosciences, Medical University of South Carolina, Charleston, South Carolina, United States of America.
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30
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Durstewitz D. Implications of synaptic biophysics for recurrent network dynamics and active memory. Neural Netw 2009; 22:1189-200. [PMID: 19647396 DOI: 10.1016/j.neunet.2009.07.016] [Citation(s) in RCA: 40] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/13/2009] [Revised: 06/17/2009] [Accepted: 07/14/2009] [Indexed: 11/30/2022]
Abstract
In cortical networks, synaptic excitation is mediated by AMPA- and NMDA-type receptors. NMDA differ from AMPA synaptic potentials with regard to peak current, time course, and a strong voltage-dependent nonlinearity. Here we illustrate based on empirical and computational findings that these specific biophysical properties may have profound implications for the dynamics of cortical networks, and via dynamics on cognitive functions like active memory. The discussion will be led along a minimal set of neural equations introduced to capture the essential dynamics of the various phenomena described. NMDA currents could establish cortical bistability and may provide the relatively constant synaptic drive needed to robustly maintain enhanced levels of activity during working memory epochs, freeing fast AMPA currents for other computational purposes. Perhaps more importantly, variations in NMDA synaptic input-due to their biophysical particularities-control the dynamical regime within which single neurons and networks reside. By provoking bursting, chaotic irregularity, and coherent oscillations their major effect may be on the temporal pattern of spiking activity, rather than on average firing rate. During active memory, neurons may thus be pushed into a spiking regime that harbors complex temporal structure, potentially optimal for the encoding and processing of temporal sequence information. These observations provide a qualitatively different view on the role of synaptic excitation in neocortical dynamics than entailed by many more abstract models. In this sense, this article is a plead for taking the specific biophysics of real neurons and synapses seriously when trying to account for the neurobiology of cognition.
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Affiliation(s)
- Daniel Durstewitz
- Central Institute of Mental Health, RG Computational Neuroscience, and Interdisciplinary Center for Neurosciences, University of Heidelberg, Mannheim, Germany.
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31
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Shinomoto S, Kim H, Shimokawa T, Matsuno N, Funahashi S, Shima K, Fujita I, Tamura H, Doi T, Kawano K, Inaba N, Fukushima K, Kurkin S, Kurata K, Taira M, Tsutsui KI, Komatsu H, Ogawa T, Koida K, Tanji J, Toyama K. Relating neuronal firing patterns to functional differentiation of cerebral cortex. PLoS Comput Biol 2009; 5:e1000433. [PMID: 19593378 PMCID: PMC2701610 DOI: 10.1371/journal.pcbi.1000433] [Citation(s) in RCA: 140] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/26/2009] [Accepted: 06/04/2009] [Indexed: 12/03/2022] Open
Abstract
It has been empirically established that the cerebral cortical areas defined by Brodmann one hundred years ago solely on the basis of cellular organization are closely correlated to their function, such as sensation, association, and motion. Cytoarchitectonically distinct cortical areas have different densities and types of neurons. Thus, signaling patterns may also vary among cytoarchitectonically unique cortical areas. To examine how neuronal signaling patterns are related to innate cortical functions, we detected intrinsic features of cortical firing by devising a metric that efficiently isolates non-Poisson irregular characteristics, independent of spike rate fluctuations that are caused extrinsically by ever-changing behavioral conditions. Using the new metric, we analyzed spike trains from over 1,000 neurons in 15 cortical areas sampled by eight independent neurophysiological laboratories. Analysis of firing-pattern dissimilarities across cortical areas revealed a gradient of firing regularity that corresponded closely to the functional category of the cortical area; neuronal spiking patterns are regular in motor areas, random in the visual areas, and bursty in the prefrontal area. Thus, signaling patterns may play an important role in function-specific cerebral cortical computation. Neurons, or nerve cells in the brain, communicate with each other using stereotyped electric pulses, called spikes. It is believed that neurons convey information mainly through the frequency of the transmitted spikes, called the firing rate. In addition, neurons may communicate some information through the finer temporal patterns of the spikes. Neuronal firing patterns may depend on cellular organization, which varies among the regions of the brain, according to the roles they play, such as sensation, association, and motion. In order to examine the relationship among signals, structure, and function, we devised a metric to detect firing irregularity intrinsic and specific to individual neurons and analyzed spike sequences from over 1,000 neurons in 15 different cortical areas. Here we report two results of this study. First, we found that neurons exhibit stable firing patterns that can be characterized as “regular”, “random”, and “bursty”. Second, we observed a strong correlation between the type of signaling pattern exhibited by neurons in a given area and the function of that area. This suggests that, in addition to reflecting the cellular organization of the brain, neuronal signaling patterns may also play a role in specific types of neuronal computations.
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Affiliation(s)
- Shigeru Shinomoto
- Graduate School of Science, Kyoto University, Sakyo-ku, Kyoto, Japan.
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32
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Wang HX, Gao WJ. Cell type-specific development of NMDA receptors in the interneurons of rat prefrontal cortex. Neuropsychopharmacology 2009; 34:2028-40. [PMID: 19242405 PMCID: PMC2730038 DOI: 10.1038/npp.2009.20] [Citation(s) in RCA: 159] [Impact Index Per Article: 9.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 04/14/2008] [Revised: 01/27/2009] [Accepted: 01/29/2009] [Indexed: 12/20/2022]
Abstract
In the prefrontal cortex, N-methyl-D-aspartic acid (NMDA) receptors (NMDARs) are critical not only for normal prefrontal functions but also for the pathological processes of schizophrenia. Little is known, however, about the developmental properties of NMDARs in the functionally diverse sub-populations of interneurons. We investigated the developmental changes of NMDARs in rat prefrontal interneurons using patch clamp recording in cortical slices. We found that fast-spiking (FS) interneurons exhibited properties of alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid (AMPA) and NMDA currents distinct from those in regular spiking (RS) and low-threshold spiking (LTS) interneurons, particularly during the adolescent period. In juvenile animals, most (73%) of the FS cells demonstrated both AMPA and NMDA currents. The NMDA currents, however, gradually became undetectable during cortical development, with most (74%) of the FS cells exhibiting no NMDA current in adults. In contrast, AMPA and NMDA currents in RS and LTS interneurons were relatively stable, without significant changes from juveniles to adults. Moreover, even in FS cells with NMDA currents, the NMDA/AMPA ratio dramatically decreased during the adolescent period but returned to juvenile level in adults, compared with the relatively stable ratios in RS and LTS interneurons. These data suggest that FS interneurons in the prefrontal cortex undergo dramatic changes in glutamatergic receptors during the adolescent period. These properties may make FS cells particularly sensitive and vulnerable to epigenetic stimulation, thus contributing to the onset of many psychiatric disorders, including schizophrenia.
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Affiliation(s)
- Huai-Xing Wang
- Department of Neurobiology & Anatomy, Drexel University College of Medicine, Philadelphia, PA 19129
| | - Wen-Jun Gao
- Department of Neurobiology & Anatomy, Drexel University College of Medicine, Philadelphia, PA 19129
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33
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Young CK, Eggermont JJ. Coupling of mesoscopic brain oscillations: recent advances in analytical and theoretical perspectives. Prog Neurobiol 2009; 89:61-78. [PMID: 19549556 DOI: 10.1016/j.pneurobio.2009.06.002] [Citation(s) in RCA: 42] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/23/2009] [Revised: 04/27/2009] [Accepted: 06/15/2009] [Indexed: 01/12/2023]
Abstract
Oscillatory brain activities have been traditionally studied in the context of how oscillations at a single frequency recorded from a single area could reveal functional insights. Recent advances in methodology used in signal analysis have revealed that cross-frequency coupling, within or between functional related areas, is more informative in determining the possible roles played by brain oscillations. In this review, we begin by describing the cellular basis of oscillatory field potentials and its theorized as well as demonstrated role in brain function. The recent development of mathematical tools that allow the investigation of cross-frequency and cross-area oscillation coupling will be presented and discussed in the context of recent advances in oscillation research based on animal data. Particularly, some pitfalls and caveats of methods currently available are discussed. Data generated from the application of examined techniques are integrated back into the theoretical framework regarding the functional role of brain oscillations. We suggest that the coupling of oscillatory activities at different frequencies between brain regions is crucial for understanding the brain from a functional ensemble perspective. Effort should be directed to elucidate how cross-frequency and area coupling are modulated and controlled. To achieve this, only the correct application of analytical tools may shed light on the intricacies of information representation, generation, binding, encoding, storage and retrieval in the brain.
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Affiliation(s)
- Calvin K Young
- Behavioural Neuroscience Group, Department of Psychology, University of Calgary, Calgary, AB, Canada
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34
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Siekmeier PJ. Evidence of multistability in a realistic computer simulation of hippocampus subfield CA1. Behav Brain Res 2009; 200:220-31. [PMID: 19378385 DOI: 10.1016/j.bbr.2009.01.021] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The manner in which hippocampus processes neural signals is thought to be central to the memory encoding process. A theoretically oriented literature has suggested that this is carried out via "attractors" or distinctive spatio-temporal patterns of activity. However, these ideas have not been thoroughly investigated using computational models featuring both realistic single-cell physiology and detailed cell-to-cell connectivity. Here we present a 452 cell simulation based on Traub et al.'s pyramidal cell [Traub RD, Jefferys JG, Miles R, Whittington MA, Toth K. A branching dendritic model of a rodent CA3 pyramidal neurone. J Physiol (Lond) 1994;481:79-95] and interneuron [Traub RD, Miles R, Pyramidal cell-to-inhibitory cell spike transduction explicable by active dendritic conductances in inhibitory cell. J Comput Neurosci 1995;2:291-8] models, incorporating patterns of synaptic connectivity based on an extensive review of the neuroanatomic literature. When stimulated with a one second physiologically realistic input, our simulated tissue shows the ability to hold activity on-line for several seconds; furthermore, its spiking activity, as measured by frequency and interspike interval (ISI) distributions, resembles that of in vivo hippocampus. An interesting emergent property of the system is its tendency to transition from stable state to stable state, a behavior consistent with recent experimental findings [Sasaki T, Matsuki N, Ikegaya Y. Metastability of active CA3 networks. J Neurosci 2007;27:517-28]. Inspection of spike trains and simulated blockade of K(AHP) channels suggest that this is mediated by spike frequency adaptation. This finding, in conjunction with studies showing that apamin, a K(AHP) channel blocker, enhances the memory consolidation process in laboratory animals, suggests the formation of stable attractor states is central to the process by which memories are encoded. Ways that this methodology could shed light on the etiology of mental illness, such as schizophrenia, are discussed.
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Affiliation(s)
- Peter J Siekmeier
- Harvard Medical School and McLean Hospital, 115 Mill Street, Belmont, MA 02478, USA.
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Durstewitz D, Seamans JK. The dual-state theory of prefrontal cortex dopamine function with relevance to catechol-o-methyltransferase genotypes and schizophrenia. Biol Psychiatry 2008; 64:739-49. [PMID: 18620336 DOI: 10.1016/j.biopsych.2008.05.015] [Citation(s) in RCA: 393] [Impact Index Per Article: 23.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 02/21/2008] [Revised: 04/18/2008] [Accepted: 05/20/2008] [Indexed: 10/21/2022]
Abstract
There is now general consensus that at least some of the cognitive deficits in schizophrenia are related to dysfunctions in the prefrontal cortex (PFC) dopamine (DA) system. At the cellular and synaptic level, the effects of DA in PFC via D1- and D2-class receptors are highly complex, often apparently opposing, and hence difficult to understand with regard to their functional implications. Biophysically realistic computational models have provided valuable insights into how the effects of DA on PFC neurons and synaptic currents as measured in vitro link up to the neural network and cognitive levels. They suggest the existence of two discrete dynamical regimes, a D1-dominated state characterized by a high energy barrier among different network patterns that favors robust online maintenance of information and a D2-dominated state characterized by a low energy barrier that is beneficial for flexible and fast switching among representational states. These predictions are consistent with a variety of electrophysiological, neuroimaging, and behavioral results in humans and nonhuman species. Moreover, these biophysically based models predict that imbalanced D1:D2 receptor activation causing extremely low or extremely high energy barriers among activity states could lead to the emergence of cognitive, positive, and negative symptoms observed in schizophrenia. Thus, combined experimental and computational approaches hold the promise of allowing a detailed mechanistic understanding of how DA alters information processing in normal and pathological conditions, thereby potentially providing new routes for the development of pharmacological treatments for schizophrenia.
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Affiliation(s)
- Daniel Durstewitz
- Centre for Theoretical and Computational Neuroscience, Faculty of Science, University of Plymouth, Plymouth, United Kingdom.
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36
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Computational models of schizophrenia and dopamine modulation in the prefrontal cortex. Nat Rev Neurosci 2008; 9:696-709. [DOI: 10.1038/nrn2462] [Citation(s) in RCA: 267] [Impact Index Per Article: 15.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
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37
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Gonzalez-Burgos G, Lewis DA. GABA neurons and the mechanisms of network oscillations: implications for understanding cortical dysfunction in schizophrenia. Schizophr Bull 2008; 34:944-61. [PMID: 18586694 PMCID: PMC2518635 DOI: 10.1093/schbul/sbn070] [Citation(s) in RCA: 409] [Impact Index Per Article: 24.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
Abstract
Synchronization of neuronal activity in the neocortex may underlie the coordination of neural representations and thus is critical for optimal cognitive function. Because cognitive deficits are the major determinant of functional outcome in schizophrenia, identifying their neural basis is important for the development of new therapeutic interventions. Here we review the data suggesting that phasic synaptic inhibition mediated by specific subtypes of cortical gamma-aminobutyric acid (GABA) neurons is essential for the production of synchronized network oscillations. We also discuss evidence indicating that GABA neurotransmission is altered in schizophrenia and propose mechanisms by which such alterations can decrease the strength of inhibitory connections in a cell-type-specific manner. We suggest that some alterations observed in the neocortex of schizophrenia subjects may be compensatory responses that partially restore inhibitory synaptic efficacy. The findings of altered neural synchrony and impaired cognitive function in schizophrenia suggest that such compensatory responses are insufficient and that interventions aimed at augmenting the efficacy of GABA neurotransmission might be of therapeutic value.
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Barch DM, Smith E. The cognitive neuroscience of working memory: relevance to CNTRICS and schizophrenia. Biol Psychiatry 2008; 64:11-7. [PMID: 18400207 PMCID: PMC2483314 DOI: 10.1016/j.biopsych.2008.03.003] [Citation(s) in RCA: 128] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 01/16/2008] [Revised: 02/21/2008] [Accepted: 03/04/2008] [Indexed: 11/25/2022]
Abstract
Working memory is one of the central constructs in cognitive science and has received enormous attention in the theoretical and empirical literature. Similarly, working memory deficits have long been thought to be among the core cognitive deficits in schizophrenia, making it a ripe area for translation. This article provides a brief overview of the current theories and data on the psychological and neural mechanisms involved in working memory, which is a summary of the presentation and discussion on working memory that occurred at the first Cognitive Neuroscience Treatment Research to Improve Cognition in Schizophrenia (CNTRICS) meeting (Washington, D.C.). At this meeting, the consensus was that the constructs of goal maintenance and interference control were the most ready to be pursued as part of a translational cognitive neuroscience effort at future CNTRICS meetings. The constructs of long-term memory reactivation, capacity, and strategic encoding were felt to be of great clinical interest but requiring more basic research. In addition, the group felt that the constructs of maintenance over time and updating in working memory had growing construct validity at the psychological and neural levels but required more research in schizophrenia before these should be considered as targets for a clinical trials setting.
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39
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Impaired associative learning in schizophrenia: behavioral and computational studies. Cogn Neurodyn 2008; 2:207-19. [PMID: 19003486 DOI: 10.1007/s11571-008-9054-0] [Citation(s) in RCA: 33] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/03/2008] [Revised: 06/01/2008] [Accepted: 06/01/2008] [Indexed: 12/17/2022] Open
Abstract
Associative learning is a central building block of human cognition and in large part depends on mechanisms of synaptic plasticity, memory capacity and fronto-hippocampal interactions. A disorder like schizophrenia is thought to be characterized by altered plasticity, and impaired frontal and hippocampal function. Understanding the expression of this dysfunction through appropriate experimental studies, and understanding the processes that may give rise to impaired behavior through biologically plausible computational models will help clarify the nature of these deficits. We present a preliminary computational model designed to capture learning dynamics in healthy control and schizophrenia subjects. Experimental data was collected on a spatial-object paired-associate learning task. The task evinces classic patterns of negatively accelerated learning in both healthy control subjects and patients, with patients demonstrating lower rates of learning than controls. Our rudimentary computational model of the task was based on biologically plausible assumptions, including the separation of dorsal/spatial and ventral/object visual streams, implementation of rules of learning, the explicit parameterization of learning rates (a plausible surrogate for synaptic plasticity), and learning capacity (a plausible surrogate for memory capacity). Reductions in learning dynamics in schizophrenia were well-modeled by reductions in learning rate and learning capacity. The synergy between experimental research and a detailed computational model of performance provides a framework within which to infer plausible biological bases of impaired learning dynamics in schizophrenia.
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40
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Henson MA, Roberts AC, Salimi K, Vadlamudi S, Hamer RM, Gilmore JH, Jarskog LF, Philpot BD. Developmental regulation of the NMDA receptor subunits, NR3A and NR1, in human prefrontal cortex. ACTA ACUST UNITED AC 2008; 18:2560-73. [PMID: 18296432 DOI: 10.1093/cercor/bhn017] [Citation(s) in RCA: 77] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Abstract
Subunit composition of N-methyl-D-aspartate-type glutamate receptors (NMDARs) dictates their function, yet the ontogenic profiles of human NMDAR subunits from gestation to adulthood have not been determined. We examined NMDAR mRNA and protein development in human dorsolateral prefrontal cortex (DLPFC), an area in which NMDARs are critical for higher cognitive processing and NMDAR hypofunction is hypothesized in schizophrenia. Using quantitative reverse transcriptase-polymerase chain reaction and western blotting, we found NR1 expression begins low prenatally, peaks in adolescence, yet remains high throughout life, suggesting lifelong importance of NMDAR function. In contrast, NR3A levels are low during gestation, surge soon after birth, and decline progressively through adolescence and into adulthood. Because NR3A subunits uniquely attenuate NMDAR-mediated currents, limit calcium influx, and suppress dendritic spine formation, high levels during early childhood may be important for regulating neuroprotection and activity-dependent sculpting of synapses. We also examined whether subunit changes underlie reduced NMDAR activity in schizophrenia. Our results reveal normal NR1 and NR3A protein levels in DLPFC from schizophrenic patients, indicating that NMDAR hypofunction is unlikely to be maintained by gross changes in NR3A-containing NMDARs or overall NMDAR numbers. These data provide insights into NMDAR functions in the developing CNS and will contribute to designing pharmacotherapies for neurological disorders.
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Affiliation(s)
- Maile A Henson
- Curriculum in Neurobiology, University of North Carolina, Chapel Hill, NC 27705, USA
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41
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Balanced excitatory and inhibitory inputs to cortical neurons decouple firing irregularity from rate modulations. J Neurosci 2008; 27:13802-12. [PMID: 18077692 DOI: 10.1523/jneurosci.2452-07.2007] [Citation(s) in RCA: 61] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
In vivo cortical neurons are known to exhibit highly irregular spike patterns. Because the intervals between successive spikes fluctuate greatly, irregular neuronal firing makes it difficult to estimate instantaneous firing rates accurately. If, however, the irregularity of spike timing is decoupled from rate modulations, the estimate of firing rate can be improved. Here, we introduce a novel coding scheme to make the firing irregularity orthogonal to the firing rate in information representation. The scheme is valid if an interspike interval distribution can be well fitted by the gamma distribution and the firing irregularity is constant over time. We investigated in a computational model whether fluctuating external inputs may generate gamma process-like spike outputs, and whether the two quantities are actually decoupled. Whole-cell patch-clamp recordings of cortical neurons were performed to confirm the predictions of the model. The output spikes were well fitted by the gamma distribution. The firing irregularity remained approximately constant regardless of the firing rate when we injected a balanced input, in which excitatory and inhibitory synapses are activated concurrently while keeping their conductance ratio fixed. The degree of irregular firing depended on the effective reversal potential set by the balance between excitation and inhibition. In contrast, when we modulated conductances out of balance, the irregularity varied with the firing rate. These results indicate that the balanced input may improve the efficiency of neural coding by clamping the firing irregularity of cortical neurons. We demonstrate how this novel coding scheme facilitates stimulus decoding.
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Persistent neural activity in the prefrontal cortex: a mechanism by which BDNF regulates working memory? PROGRESS IN BRAIN RESEARCH 2008; 169:251-66. [PMID: 18394479 DOI: 10.1016/s0079-6123(07)00015-5] [Citation(s) in RCA: 40] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
Working memory is the ability to maintain representations of task-relevant information for short periods of time to guide subsequent actions or make decisions. Neurons of the prefrontal cortex exhibit persistent firing during the delay period of working memory tasks. Despite extensive studies, the mechanisms underlying this persistent neural activity remain largely obscure. The neurotransmitter systems of dopamine, NMDA, and GABA have been implicated, but further investigations are necessary to establish their precise roles and relationships. Recent research has suggested a new component: brain-derived neurotrophic factor (BDNF) and its high-affinity receptor, TrkB. We review the research on persistent activity and suggest that BDNF/TrkB signaling in a distinct class of interneurons plays an important role in organizing persistent neural activity at the single-neuron and network levels.
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Affiliation(s)
- Daniel Durstewitz
- Centre for Theoretical and Computational Neuroscience, University of Plymouth, Portland Square, Drake Circus, Plymouth PL4 8AA, UK.
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