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Kawaguchi K, Notaguchi M, Okayasu K, Sawai Y, Kojima M, Takebayashi Y, Sakakibara H, Otagaki S, Matsumoto S, Shiratake K. Plant hormone profiling of scion and rootstock incision sites and intra- and inter-family graft junctions in Nicotiana benthamiana. PLANT SIGNALING & BEHAVIOR 2024; 19:2331358. [PMID: 38513064 PMCID: PMC10962582 DOI: 10.1080/15592324.2024.2331358] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/25/2023] [Accepted: 02/07/2024] [Indexed: 03/23/2024]
Abstract
Many previous studies have suggested that various plant hormones play essential roles in the grafting process. In this study, to understand the plant hormones that accumulate in the graft junctions, whether these are supplied from the scion or rootstock, and how these hormones play a role in the grafting process, we performed a hormonome analysis that accumulated in the incision site of the upper plants from the incision as "ungrafted scion" and lower plants from the incision as "ungrafted rootstock" in Nicotiana benthamiana. The results revealed that indole-3-acetic acid (IAA) and gibberellic acid (GA), which regulate cell division; abscisic acid (ABA) and jasmonic acid (JA), which regulate xylem formation; cytokinin (CK), which regulates callus formation, show different accumulation patterns in the incision sites of the ungrafted scion and rootstock. In addition, to try discussing the differences in the degree and speed of each event during the grafting process between intra- and inter-family grafting by determining the concentration and accumulation timing of plant hormones in the graft junctions, we performed hormonome analysis of graft junctions of intra-family grafted plants with N. benthamiana as scion and Solanum lycopersicum as rootstock (Nb/Sl) and inter-family grafted plants with N. benthamiana as scion and Arabidopsis thaliana as rootstock (Nb/At), using the ability of Nicotiana species to graft with many plant species. The results revealed that ABA and CK showed different accumulation timings; IAA, JA, and salicylic acid (SA) showed similar accumulation timings, while different accumulated concentrations in the graft junctions of Nb/Sl and Nb/At. This information is important for understanding the molecular mechanisms of plant hormones in the grafting process and the differences in molecular mechanisms between intra- and inter-family grafting.
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Affiliation(s)
- Kohei Kawaguchi
- Graduate School of Bioagricultural Sciences, Nagoya University, Nagoya, Japan
| | - Michitaka Notaguchi
- Graduate School of Bioagricultural Sciences, Nagoya University, Nagoya, Japan
| | - Koji Okayasu
- Graduate School of Bioagricultural Sciences, Nagoya University, Nagoya, Japan
| | - Yu Sawai
- Graduate School of Bioagricultural Sciences, Nagoya University, Nagoya, Japan
| | - Mikiko Kojima
- RIKEN Center for Sustainable Resource Science, Plant Productivity Systems Research Group, Yokohama, Japan
| | - Yumiko Takebayashi
- RIKEN Center for Sustainable Resource Science, Plant Productivity Systems Research Group, Yokohama, Japan
| | - Hitoshi Sakakibara
- Graduate School of Bioagricultural Sciences, Nagoya University, Nagoya, Japan
- RIKEN Center for Sustainable Resource Science, Plant Productivity Systems Research Group, Yokohama, Japan
| | - Shungo Otagaki
- Graduate School of Bioagricultural Sciences, Nagoya University, Nagoya, Japan
| | - Shogo Matsumoto
- Graduate School of Bioagricultural Sciences, Nagoya University, Nagoya, Japan
| | - Katsuhiro Shiratake
- Graduate School of Bioagricultural Sciences, Nagoya University, Nagoya, Japan
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Duret M, Wallner A, Buée M, Aziz A. Rhizosphere microbiome assembly, drivers and functions in perennial ligneous plant health. Microbiol Res 2024; 287:127860. [PMID: 39089083 DOI: 10.1016/j.micres.2024.127860] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/07/2024] [Revised: 07/21/2024] [Accepted: 07/28/2024] [Indexed: 08/03/2024]
Abstract
Plants shape and interact continuously with their rhizospheric microbiota, which play a key role in plant health and resilience. However, plant-associated microbial community can be shaped by several factors including plant phenotype and cropping system. Thus, understanding the interplay between microbiome assembly during the onset of plant-pathogen interactions and long-lasting resistance traits in ligneous plants remains a major challenge. To date, such attempts were mainly investigated in herbaceous plants, due to their phenotypic characteristics and their short life cycle. However, only few studies have focused on the microbial structure, dynamic and their drivers in perennial ligneous plants. Ligneous plants coevolved in interaction with specific fungal and bacterial communities that differ from those of annual plants. The specificities of such ligneous plants in shaping their own functional microbial communities could be dependent on their high heterozygosis, physiological and molecular status associated to seasonality and their aging processes, root system and above-ground architectures, long-lasting climatic variations, and specific cultural practices. This article provides an overview of the specific characteristics of perennial ligneous plants that are likely to modulate symbiotic interactions in the rhizosphere, thus affecting the plant's fitness and systemic immunity. Plant and microbial traits contributing to the establishment of plant-microbiome interactions and the adaptation of this holobiont are also discussed.
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Affiliation(s)
- Morgane Duret
- Université de Reims Champagne-Ardenne, INRAE, RIBP, USC 1488, UFR Sciences, Reims 51100, France
| | - Adrian Wallner
- Université de Reims Champagne-Ardenne, INRAE, RIBP, USC 1488, UFR Sciences, Reims 51100, France
| | - Marc Buée
- Centre INRAE Grand Est-Nancy, UMR Interactions Arbres-Microorganismes, Champenoux 54280, France
| | - Aziz Aziz
- Université de Reims Champagne-Ardenne, INRAE, RIBP, USC 1488, UFR Sciences, Reims 51100, France.
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Li X, Wang R, Wang Y, Li X, Shi Q, Yu Y. PpGATA21 Enhances the Expression of PpGA2ox7 to Regulate the Mechanism of Cerasus humilis Rootstock-Mediated Dwarf in Peach Trees. Int J Mol Sci 2024; 25:7402. [PMID: 39000509 PMCID: PMC11242874 DOI: 10.3390/ijms25137402] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/03/2024] [Revised: 06/28/2024] [Accepted: 07/04/2024] [Indexed: 07/16/2024] Open
Abstract
Dwarfing rootstocks enhance planting density, lower tree height, and reduce both labor in peach production. Cerasus humilis is distinguished by its dwarf stature, rapid growth, and robust fruiting capabilities, presenting substantial potential for further development. In this study, Ruipan 4 was used as the scion and grafted onto Amygdalus persica and Cerasus humilis, respectively. The results indicate that compared to grafting combination R/M (Ruipan 4/Amygdalus persica), grafting combination R/O (Ruipan 4/Cerasus humilis) plants show a significant reduction in height and a significant increase in flower buds. RNA-seq indicates that genes related to gibberellin (GA) and auxin metabolism are involved in the dwarfing process of scions mediated by C. humilis. The expression levels of the GA metabolism-related gene PpGA2ox7 significantly increased in R/O and are strongly correlated with plant height, branch length, and internode length. Furthermore, GA levels were significantly reduced in R/O. The transcription factor PpGATA21 was identified through yeast one-hybrid screening of the PpGA2ox7 promoter. Yeast one-hybrid (Y1H) and dual-luciferase reporter (DLR) demonstrate that PpGATA21 can bind to the promoter of PpGA2ox7 and activate its expression. Overall, PpGATA21 activates the expression of the GA-related gene PpGA2ox7, resulting in reduced GA levels and consequent dwarfing of plants mediated by C. humilis. This study provides new insights into the mechanisms of C. humilis and offers a scientific foundation for the dwarfing and high-density cultivation of peach trees.
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Affiliation(s)
- Xiuzhen Li
- College of Horticulture and Plant Protection, Henan University of Science and Technology, Luoyang 471023, China; (X.L.); (R.W.); (Y.W.); (X.L.); (Q.S.)
| | - Ruxin Wang
- College of Horticulture and Plant Protection, Henan University of Science and Technology, Luoyang 471023, China; (X.L.); (R.W.); (Y.W.); (X.L.); (Q.S.)
- Henan Provincial Engineering Research Center on Characteristic Berry Germplasm Innovation & Utilization, Luoyang 471023, China
| | - Yuman Wang
- College of Horticulture and Plant Protection, Henan University of Science and Technology, Luoyang 471023, China; (X.L.); (R.W.); (Y.W.); (X.L.); (Q.S.)
| | - Xueqiang Li
- College of Horticulture and Plant Protection, Henan University of Science and Technology, Luoyang 471023, China; (X.L.); (R.W.); (Y.W.); (X.L.); (Q.S.)
| | - Qiaofang Shi
- College of Horticulture and Plant Protection, Henan University of Science and Technology, Luoyang 471023, China; (X.L.); (R.W.); (Y.W.); (X.L.); (Q.S.)
- Henan Provincial Engineering Research Center on Characteristic Berry Germplasm Innovation & Utilization, Luoyang 471023, China
| | - Yihe Yu
- College of Horticulture and Plant Protection, Henan University of Science and Technology, Luoyang 471023, China; (X.L.); (R.W.); (Y.W.); (X.L.); (Q.S.)
- Henan Provincial Engineering Research Center on Characteristic Berry Germplasm Innovation & Utilization, Luoyang 471023, China
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Zhou H, Wang X, Amar MH, Sheng Y, Shi P, Qiu K, Wang Y, Xie Q, Chen H, Pan H, Zhang J. Abscisic acid induces PpeKIL1 to terminate fruit growth and promote fruit abortion in peach (Prunus persica). PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2024; 212:108761. [PMID: 38805756 DOI: 10.1016/j.plaphy.2024.108761] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/30/2023] [Revised: 03/27/2024] [Accepted: 05/20/2024] [Indexed: 05/30/2024]
Abstract
Abnormal pollination from chance events or hybridization between species leads to unusual embryo development, resulting in fruit abortion. To elucidate the mechanism underlying fruit abortion, we conducted a comprehensive analysis of the transcriptome and hormone profiles in aborting fruits (AF) derived from an interspecific cross between the peach cultivar 'Huangjinmi 3' and the Prunus mume cultivar 'Jiangmei', as well as in normal-seeded fruits (NF) resulting from an intraspecific cross of 'Huangjinmi 3' with the 'Manyuanhong' peach cultivars. Growth of AF was inhibited during the exponential growth phase, with up-regulation of oxidative stress related genes and down-regulation of DNA replication and cell cycle genes. Accumulation of the tissue growth-related hormones auxin and cytokinin was reduced in AF, while levels of the growth inhibiting hormone abscisic acid (ABA) were higher compared to NF. The increased ABA concentration aligned with down-regulation of the ABA catabolism gene CYP707A2, which encodes abscisic acid 8'-hydroxylase. Correlation analysis showed ABA could explain the maximum proportion of differently expressed genes between NF and AF. We also showed that expression of KIRA1-LIKE1 (PpeKIL1), a peach ortholog of the Arabidopsis KIRA1 gene, was up-regulated in AF. PpeKIL1 promotes senescence or delays normal growth in tobacco and Arabidopsis, and its promoter activity increases with exogenous ABA treatment. Our study demonstrates a candidate mechanism where ABA induces expression of PpeKIL1, which further blocks normal fruit growth and triggers fruit abscission.
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Affiliation(s)
- Hui Zhou
- Key Laboratory of Horticultural Crop Germplasm Innovation and Utilization (Co-construction by Ministry and Province), Key Laboratory of Horticultural Crop Genetic Improvement and Eco-Physiology of Anhui Province, Institute of Horticulture, Anhui Academy of Agricultural Sciences, Hefei, 230031, China.
| | - Xiao Wang
- Soil and Fertilizer Research Institute, Anhui Academy of Agricultural Sciences, Hefei, 230031, China.
| | | | - Yu Sheng
- Key Laboratory of Horticultural Crop Germplasm Innovation and Utilization (Co-construction by Ministry and Province), Key Laboratory of Horticultural Crop Genetic Improvement and Eco-Physiology of Anhui Province, Institute of Horticulture, Anhui Academy of Agricultural Sciences, Hefei, 230031, China.
| | - Pei Shi
- Key Laboratory of Horticultural Crop Germplasm Innovation and Utilization (Co-construction by Ministry and Province), Key Laboratory of Horticultural Crop Genetic Improvement and Eco-Physiology of Anhui Province, Institute of Horticulture, Anhui Academy of Agricultural Sciences, Hefei, 230031, China.
| | - Keli Qiu
- School of Life Science, Anhui Agricultural University, No. 130, Changjiangxi Road, Hefei, 230036, China.
| | - Yunyun Wang
- School of Life Science, Anhui Agricultural University, No. 130, Changjiangxi Road, Hefei, 230036, China.
| | - Qingmei Xie
- Key Laboratory of Horticultural Crop Germplasm Innovation and Utilization (Co-construction by Ministry and Province), Key Laboratory of Horticultural Crop Genetic Improvement and Eco-Physiology of Anhui Province, Institute of Horticulture, Anhui Academy of Agricultural Sciences, Hefei, 230031, China.
| | - Hongli Chen
- Key Laboratory of Horticultural Crop Germplasm Innovation and Utilization (Co-construction by Ministry and Province), Key Laboratory of Horticultural Crop Genetic Improvement and Eco-Physiology of Anhui Province, Institute of Horticulture, Anhui Academy of Agricultural Sciences, Hefei, 230031, China.
| | - Haifa Pan
- Key Laboratory of Horticultural Crop Germplasm Innovation and Utilization (Co-construction by Ministry and Province), Key Laboratory of Horticultural Crop Genetic Improvement and Eco-Physiology of Anhui Province, Institute of Horticulture, Anhui Academy of Agricultural Sciences, Hefei, 230031, China.
| | - Jinyun Zhang
- Key Laboratory of Horticultural Crop Germplasm Innovation and Utilization (Co-construction by Ministry and Province), Key Laboratory of Horticultural Crop Genetic Improvement and Eco-Physiology of Anhui Province, Institute of Horticulture, Anhui Academy of Agricultural Sciences, Hefei, 230031, China.
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Febres VJ, Fadli A, Meyering B, Yu F, Bowman KD, Chaparro JX, Albrecht U. Dissection of transcriptional events in graft incompatible reactions of "Bearss" lemon ( Citrus limon) and "Valencia" sweet orange ( C. sinensis) on a novel citrandarin ( C. reticulata × Poncirus trifoliata) rootstock. FRONTIERS IN PLANT SCIENCE 2024; 15:1421734. [PMID: 38966146 PMCID: PMC11222572 DOI: 10.3389/fpls.2024.1421734] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 04/22/2024] [Accepted: 06/03/2024] [Indexed: 07/06/2024]
Abstract
Citrus is commercially propagated via grafting, which ensures trees have consistent fruit traits combined with favorable traits from the rootstock such as soil adaptability, vigor, and resistance to soil pathogens. Graft incompatibility can occur when the scion and rootstock are not able to form a permanent, healthy union. Understanding and preventing graft incompatibility is of great importance in the breeding of new fruit cultivars and in the choice of scion and rootstock by growers. The rootstock US-1283, a citrandarin generated from a cross of "Ninkat" mandarin (Citrus reticulata) and "Gotha Road" #6 trifoliate orange (Poncirus trifoliata), was released after years of field evaluation because of its superior productivity and good fruit quality on "Hamlin" sweet orange (C. sinensis) under Florida's growing conditions. Subsequently, it was observed that trees of "Bearss" lemon (C. limon) and "Valencia" sweet orange (C. sinensis) grafted onto US-1283 exhibited unhealthy growth near the graft union. The incompatibility manifested as stem grooving and necrosis underneath the bark on the rootstock side of the graft. Another citrandarin rootstock, US-812 (C. reticulata "Sunki" × P. trifoliata "Benecke"), is fully graft compatible with the same scions. Transcriptome analysis was performed on the vascular tissues above and below the graft union of US-812 and US-1283 graft combinations with "Bearss" and "Valencia" to identify expression networks associated with incompatibility and help understand the processes and potential causes of incompatibility. Transcriptional reprogramming was stronger in the incompatible rootstock than in the grafted scions. Differentially expressed genes (DEGs) in US-1283, but not the scions, were associated with oxidative stress and plant defense, among others, similar to a pathogen-induced immune response localized to the rootstock; however, no pathogen infection was detected. Therefore, it is hypothesized that this response could have been triggered by signaling miscommunications between rootstock and scion either through (1) unknown molecules from the scion that were perceived as danger signals by the rootstock, (2) missing signals from the scion or missing receptors in the rootstock necessary for the formation of a healthy graft union, (3) the overall perception of the scion by the rootstock as non-self, or (4) a combination of the above.
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Affiliation(s)
- Vicente J. Febres
- Horticultural Sciences Department, University of Florida/Institute of Food and Agricultural Sciences (IFAS), Gainesville, FL, United States
| | - Anas Fadli
- Southwest Florida Research and Education Center, University of Florida/Institute of Food and Agricultural Sciences (IFAS), Immokalee, FL, United States
| | - Bo Meyering
- Southwest Florida Research and Education Center, University of Florida/Institute of Food and Agricultural Sciences (IFAS), Immokalee, FL, United States
| | - Fahong Yu
- Interdisciplinary Center for Biotechnology Research (ICBR), University of Florida, Gainesville, FL, United States
| | - Kim D. Bowman
- Horticultural Research Laboratory, United States Department of Agriculture (USDA), Fort Pierce, FL, United States
| | - Jose Xavier Chaparro
- Horticultural Sciences Department, University of Florida/Institute of Food and Agricultural Sciences (IFAS), Gainesville, FL, United States
| | - Ute Albrecht
- Southwest Florida Research and Education Center, University of Florida/Institute of Food and Agricultural Sciences (IFAS), Immokalee, FL, United States
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Tan Q, Zhou C, Xu P, Huang X, Pan Z, Wei Y, Wang W, Wang L. Effects of Substrate Composition on the Growth Traits of Grafted Seedling in Macadamia ( Macadamia integrifolia) Nuts. PLANTS (BASEL, SWITZERLAND) 2024; 13:1700. [PMID: 38931133 PMCID: PMC11207545 DOI: 10.3390/plants13121700] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/19/2024] [Revised: 06/15/2024] [Accepted: 06/17/2024] [Indexed: 06/28/2024]
Abstract
Macadamia nut plantings in China are expanding year by year. In order to breed and promote superior varieties, this study analyzed the effects of different rootstocks and scions on the survival rate of grafted seedlings, and then selected the best substrate composition for plant growth. The results showed that the survival rate of the HAES788 variety as rootstock and Guire No. 1 as scion was the highest, reaching 96%. The optimal grafting time in December was better than that in March. Furthermore, among 16 substrate formulations, T12, T13, T15, and T16 had advantages of agglomerated soil and more well-developed root systems compared to the CK made of loess. The plant height, stem diameter, leaf length, leaf width, and dry weight of the aboveground and underground parts of the grafted seedlings planted in these substrate formulations were significantly higher than those plants planted in the CK. In addition, the substrate formulations T12, T13, T15, and T16 significantly improved the organic matter, total nitrogen, and total potassium content of the substrate soils, but little improvement was observed for total phosphorus content after 13 months. Overall, macadamia grafting times are best in December, with HAES788 and Guire No. 1 being the best rootstock and scion. The optimal substrate formulations are T12, T13, T15, and T16. This study provides a solid foundation for the production of high-quality macadamia plants.
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Affiliation(s)
- Qiujin Tan
- Guangxi South Subtropical Agricultural Research Institute, Longzhou 532415, China (X.H.)
| | - Chunheng Zhou
- Guangxi South Subtropical Agricultural Research Institute, Longzhou 532415, China (X.H.)
| | - Peng Xu
- Guangxi South Subtropical Agricultural Research Institute, Longzhou 532415, China (X.H.)
| | - Xiyun Huang
- Guangxi South Subtropical Agricultural Research Institute, Longzhou 532415, China (X.H.)
| | - Zhenzhen Pan
- Guangxi South Subtropical Agricultural Research Institute, Longzhou 532415, China (X.H.)
| | - Yuanrong Wei
- Guangxi South Subtropical Agricultural Research Institute, Longzhou 532415, China (X.H.)
| | - Wenlin Wang
- Guangxi South Subtropical Agricultural Research Institute, Longzhou 532415, China (X.H.)
| | - Lifeng Wang
- Rubber Research Institute, Chinese Academy of Tropical Agricultural Sciences, Haikou 571101, China
- Guangxi Academy of Agricultural Sciences, Nanning 530007, China
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Mo Z, Zhang Y, Hou M, Hu L, Zhai M, Xuan J. Transcriptional dynamics reveals the asymmetrical events underlying graft union formation in pecan (Carya illinoinensis). TREE PHYSIOLOGY 2024; 44:tpae040. [PMID: 38598328 DOI: 10.1093/treephys/tpae040] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/13/2023] [Revised: 03/25/2024] [Accepted: 04/03/2024] [Indexed: 04/12/2024]
Abstract
Grafting is a widely used technique for pecan propagation; however, the background molecular events underlying grafting are still poorly understood. In our study, the graft partners during pecan [Carya illinoinensis (Wangenh.) K. Koch] graft union formation were separately sampled for RNA-seq, and the transcriptional dynamics were described via weighted gene co-expression network analysis. To reveal the main events underlying grafting, the correlations between modules and grafting traits were analyzed. Functional annotation showed that during the entire graft process, signal transduction was activated in the scion, while messenger RNA splicing was induced in the rootstock. At 2 days after grafting, the main processes occurring in the scion were associated with protein synthesis and processing, while the primary processes occurring in the rootstock were energy release-related. During the period of 7-14 days after grafting, defense response was a critical process taking place in the scion; however, the main process functioning in the rootstock was photosynthesis. From 22 to 32 days after grafting, the principal processes taking place in the scion were jasmonic acid biosynthesis and defense response, whereas the highly activated processes associated with the rootstock were auxin biosynthesis and plant-type secondary cell wall biogenesis. To further prove that the graft partners responded asymmetrically to stress, hydrogen peroxide contents as well as peroxidase and β-1,3-glucanase activities were detected, and the results showed that their levels were increased in the scion not the rootstock at certain time points after grafting. Our study reveals that the scion and rootstock might respond asymmetrically to grafting in pecan, and the scion was likely associated with stress response, while the rootstock was probably involved in energy supply and xylem bridge differentiation during graft union formation.
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Affiliation(s)
- Zhenghai Mo
- Institute of Botany, Jiangsu Province and Chinese Academy of Sciences, NO. 1 Road, Qianhuhou Villiage, Xuanwu District, Nanjing 210014, China
- Jiangsu Key Laboratory for the Research and Utilization of Plant Resources, NO. 1 Road, Qianhuhou Villiage, Xuanwu District, Nanjing 210014, China
| | - Yan Zhang
- Institute of Botany, Jiangsu Province and Chinese Academy of Sciences, NO. 1 Road, Qianhuhou Villiage, Xuanwu District, Nanjing 210014, China
- Jiangsu Key Laboratory for the Research and Utilization of Plant Resources, NO. 1 Road, Qianhuhou Villiage, Xuanwu District, Nanjing 210014, China
| | - Mengxin Hou
- Institute of Botany, Jiangsu Province and Chinese Academy of Sciences, NO. 1 Road, Qianhuhou Villiage, Xuanwu District, Nanjing 210014, China
- Jiangsu Key Laboratory for the Research and Utilization of Plant Resources, NO. 1 Road, Qianhuhou Villiage, Xuanwu District, Nanjing 210014, China
| | - Longjiao Hu
- Institute of Botany, Jiangsu Province and Chinese Academy of Sciences, NO. 1 Road, Qianhuhou Villiage, Xuanwu District, Nanjing 210014, China
- Jiangsu Key Laboratory for the Research and Utilization of Plant Resources, NO. 1 Road, Qianhuhou Villiage, Xuanwu District, Nanjing 210014, China
| | - Min Zhai
- Institute of Botany, Jiangsu Province and Chinese Academy of Sciences, NO. 1 Road, Qianhuhou Villiage, Xuanwu District, Nanjing 210014, China
- Jiangsu Key Laboratory for the Research and Utilization of Plant Resources, NO. 1 Road, Qianhuhou Villiage, Xuanwu District, Nanjing 210014, China
| | - Jiping Xuan
- Institute of Botany, Jiangsu Province and Chinese Academy of Sciences, NO. 1 Road, Qianhuhou Villiage, Xuanwu District, Nanjing 210014, China
- Jiangsu Engineering Research Center for the Germplasm Innovation and Utilization of Pecan, NO. 1 Road, Qianhuhou Villiage, Xuanwu District, Nanjing 210014, China
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He W, Chai J, Xie R, Wu Y, Wang H, Wang Y, Chen Q, Wu Z, Li M, Lin Y, Zhang Y, Luo Y, Zhang Y, Tang H, Wang X. The Effects of a New Citrus Rootstock Citrus junos cv. Shuzhen No. 1 on Performances of Ten Hybrid Citrus Cultivars. PLANTS (BASEL, SWITZERLAND) 2024; 13:794. [PMID: 38592823 PMCID: PMC10976021 DOI: 10.3390/plants13060794] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/26/2024] [Revised: 03/07/2024] [Accepted: 03/08/2024] [Indexed: 04/11/2024]
Abstract
The importance of rootstock in citrus production lies in its crucial role in determining tree growth, environmental stress tolerance, and fruit quality. Citrus junos Siebold ex Tanaka cv. Shuzhen No. 1, a recently developed rootstock, demonstrates excellent graft compatibility and abiotic stress tolerance. The objective of this study was to assess ten hybrid citrus cultivars grafted onto two C. junos rootstock selections, with the aim of determining the potential for industrial utilization of the new citrus rootstock. All graft junctions are mature and well established. Vigorous growth characterized all ten citrus cultivars on Shuzhen No. 1, with the largest tree's height reaching 280.33 cm (Wogan scion) and the widest scion's diameter being 67.52 cm (Chunjian scion). However, the scion-to-rootstock diameter ratio was the lowest at 0.62 (Chunxiang scion). C. junos rootstock selections significantly affected fruit weight (five of ten scions) and fruit color (seven of ten scions) but had negligible impact on peel thickness (nine of ten scions). Furthermore, rootstock type had a significant influence on fruit quality. In conclusion, our findings indicate strong graft compatibility between all scions and C. junos rootstocks, which can impact overall size and fruit quality. Based on these results, Shuzhen No. 1 is recommended as a valuable citrus rootstock.
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Affiliation(s)
- Wen He
- College of Horticulture, Sichuan Agricultural University, Chengdu 611130, China; (W.H.); (Y.W.); (Q.C.); (Z.W.); (M.L.); (Y.L.); (Y.Z.); (Y.L.); (Y.Z.); (H.T.)
- Key Laboratory of Agricultural Bioinformatics, Ministry of Education, Chengdu 611130, China
| | - Jiufeng Chai
- College of Horticulture, Sichuan Agricultural University, Chengdu 611130, China; (W.H.); (Y.W.); (Q.C.); (Z.W.); (M.L.); (Y.L.); (Y.Z.); (Y.L.); (Y.Z.); (H.T.)
| | - Rui Xie
- College of Horticulture, Sichuan Agricultural University, Chengdu 611130, China; (W.H.); (Y.W.); (Q.C.); (Z.W.); (M.L.); (Y.L.); (Y.Z.); (Y.L.); (Y.Z.); (H.T.)
| | - Yang Wu
- College of Horticulture, Sichuan Agricultural University, Chengdu 611130, China; (W.H.); (Y.W.); (Q.C.); (Z.W.); (M.L.); (Y.L.); (Y.Z.); (Y.L.); (Y.Z.); (H.T.)
| | - Hao Wang
- College of Horticulture, Sichuan Agricultural University, Chengdu 611130, China; (W.H.); (Y.W.); (Q.C.); (Z.W.); (M.L.); (Y.L.); (Y.Z.); (Y.L.); (Y.Z.); (H.T.)
| | - Yan Wang
- College of Horticulture, Sichuan Agricultural University, Chengdu 611130, China; (W.H.); (Y.W.); (Q.C.); (Z.W.); (M.L.); (Y.L.); (Y.Z.); (Y.L.); (Y.Z.); (H.T.)
- Key Laboratory of Agricultural Bioinformatics, Ministry of Education, Chengdu 611130, China
| | - Qing Chen
- College of Horticulture, Sichuan Agricultural University, Chengdu 611130, China; (W.H.); (Y.W.); (Q.C.); (Z.W.); (M.L.); (Y.L.); (Y.Z.); (Y.L.); (Y.Z.); (H.T.)
- Key Laboratory of Agricultural Bioinformatics, Ministry of Education, Chengdu 611130, China
| | - Zhiwei Wu
- College of Horticulture, Sichuan Agricultural University, Chengdu 611130, China; (W.H.); (Y.W.); (Q.C.); (Z.W.); (M.L.); (Y.L.); (Y.Z.); (Y.L.); (Y.Z.); (H.T.)
| | - Mengyao Li
- College of Horticulture, Sichuan Agricultural University, Chengdu 611130, China; (W.H.); (Y.W.); (Q.C.); (Z.W.); (M.L.); (Y.L.); (Y.Z.); (Y.L.); (Y.Z.); (H.T.)
| | - Yuanxiu Lin
- College of Horticulture, Sichuan Agricultural University, Chengdu 611130, China; (W.H.); (Y.W.); (Q.C.); (Z.W.); (M.L.); (Y.L.); (Y.Z.); (Y.L.); (Y.Z.); (H.T.)
| | - Yunting Zhang
- College of Horticulture, Sichuan Agricultural University, Chengdu 611130, China; (W.H.); (Y.W.); (Q.C.); (Z.W.); (M.L.); (Y.L.); (Y.Z.); (Y.L.); (Y.Z.); (H.T.)
| | - Ya Luo
- College of Horticulture, Sichuan Agricultural University, Chengdu 611130, China; (W.H.); (Y.W.); (Q.C.); (Z.W.); (M.L.); (Y.L.); (Y.Z.); (Y.L.); (Y.Z.); (H.T.)
| | - Yong Zhang
- College of Horticulture, Sichuan Agricultural University, Chengdu 611130, China; (W.H.); (Y.W.); (Q.C.); (Z.W.); (M.L.); (Y.L.); (Y.Z.); (Y.L.); (Y.Z.); (H.T.)
| | - Haoru Tang
- College of Horticulture, Sichuan Agricultural University, Chengdu 611130, China; (W.H.); (Y.W.); (Q.C.); (Z.W.); (M.L.); (Y.L.); (Y.Z.); (Y.L.); (Y.Z.); (H.T.)
| | - Xiaorong Wang
- College of Horticulture, Sichuan Agricultural University, Chengdu 611130, China; (W.H.); (Y.W.); (Q.C.); (Z.W.); (M.L.); (Y.L.); (Y.Z.); (Y.L.); (Y.Z.); (H.T.)
- Key Laboratory of Agricultural Bioinformatics, Ministry of Education, Chengdu 611130, China
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9
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Li W, Chu C, Li H, Zhang H, Sun H, Wang S, Wang Z, Li Y, Foster TM, López-Girona E, Yu J, Li Y, Ma Y, Zhang K, Han Y, Zhou B, Fan X, Xiong Y, Deng CH, Wang Y, Xu X, Han Z. Near-gapless and haplotype-resolved apple genomes provide insights into the genetic basis of rootstock-induced dwarfing. Nat Genet 2024; 56:505-516. [PMID: 38347217 DOI: 10.1038/s41588-024-01657-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/09/2022] [Accepted: 01/08/2024] [Indexed: 03/16/2024]
Abstract
Dwarfing rootstocks have transformed the production of cultivated apples; however, the genetic basis of rootstock-induced dwarfing remains largely unclear. We have assembled chromosome-level, near-gapless and haplotype-resolved genomes for the popular dwarfing rootstock 'M9', the semi-vigorous rootstock 'MM106' and 'Fuji', one of the most commonly grown apple cultivars. The apple orthologue of auxin response factor 3 (MdARF3) is in the Dw1 region of 'M9', the major locus for rootstock-induced dwarfing. Comparing 'M9' and 'MM106' genomes revealed a 9,723-bp allele-specific long terminal repeat retrotransposon/gypsy insertion, DwTE, located upstream of MdARF3. DwTE is cosegregated with the dwarfing trait in two segregating populations, suggesting its prospective utility in future dwarfing rootstock breeding. In addition, our pipeline discovered mobile mRNAs that may contribute to the development of dwarfed scion architecture. Our research provides valuable genomic resources and applicable methodology, which have the potential to accelerate breeding dwarfing rootstocks for apple and other perennial woody fruit trees.
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Affiliation(s)
- Wei Li
- Institute for Horticultural Plants, China Agricultural University, Beijing, China
| | - Chong Chu
- Department of Biomedical Informatics, Harvard Medical School, Boston, MA, USA.
| | - Hui Li
- Institute for Horticultural Plants, China Agricultural University, Beijing, China
| | - Hengtao Zhang
- Zhengzhou Fruit Research Institute, Chinese Academy of Agricultural Sciences, Zhengzhou, China
| | - Haochen Sun
- Institute for Horticultural Plants, China Agricultural University, Beijing, China
| | - Shiyao Wang
- Institute for Horticultural Plants, China Agricultural University, Beijing, China
| | - Zijun Wang
- Institute for Horticultural Plants, China Agricultural University, Beijing, China
| | - Yuqi Li
- Institute for Horticultural Plants, China Agricultural University, Beijing, China
| | - Toshi M Foster
- The New Zealand Institute for Plant and Food Research Limited (Plant & Food Research), Motueka, New Zealand
| | - Elena López-Girona
- The New Zealand Institute for Plant and Food Research Limited (Plant & Food Research), Palmerston North, New Zealand
| | - Jiaxin Yu
- Guangdong Laboratory of Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture and Rural Affairs, Chinese Academy of Agricultural Sciences, Shenzhen, China
| | - Yi Li
- Department of Plant Science and Landscape Architecture, University of Connecticut, Storrs, CT, USA
| | - Yue Ma
- College of Horticulture, Shenyang Agricultural University, Shenyang, China
| | - Ke Zhang
- State Key Laboratory of North China Crop Improvement and Regulation; Key Laboratory of Crop Growth Regulation of Hebei Province, College of Agronomy, Hebei Agricultural University, Baoding, China
| | - Yongming Han
- College of Information Science and Technology, Beijing University of Chemical Technology, Beijing, China
| | - Bowen Zhou
- Institute for Horticultural Plants, China Agricultural University, Beijing, China
| | - Xingqiang Fan
- Institute for Horticultural Plants, China Agricultural University, Beijing, China
| | - Yao Xiong
- Institute for Horticultural Plants, China Agricultural University, Beijing, China
| | - Cecilia H Deng
- The New Zealand Institute for Plant and Food Research Limited (Plant & Food Research), Auckland, New Zealand.
| | - Yi Wang
- Institute for Horticultural Plants, China Agricultural University, Beijing, China.
| | - Xuefeng Xu
- Institute for Horticultural Plants, China Agricultural University, Beijing, China
| | - Zhenhai Han
- Institute for Horticultural Plants, China Agricultural University, Beijing, China.
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10
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Miyahara T, Ohkubo H, Umeyama Y, Oguchi T, Ogawa T, Ohta D, Mochizuki T, Kodama H. Discontinuous Translocation of a Luciferase Protein beyond Graft Junction in Tobacco. Food Saf (Tokyo) 2024; 12:1-16. [PMID: 38532775 PMCID: PMC10961615 DOI: 10.14252/foodsafetyfscj.d-23-00010] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/25/2023] [Accepted: 01/29/2024] [Indexed: 03/28/2024] Open
Abstract
Transgrafting, a grafting technique that uses both genetically modified (GM) and non-GM plants, is a novel plant breeding technology that can be used to improve the efficiency of crop cultivation without introducing foreign genes into the edible parts of non-GM plants. This technique can facilitate the acquisition of disease resistance and/or increased yield. However, the translocation of low-molecular-weight compounds, ribonucleic acid (RNA), and proteins through graft junctions raises a potential safety risk for food crops. Here, we used a transgenic tobacco plant expressing a firefly luciferase gene (LUC) to examine the translocation of the LUC protein beyond the graft junction in grafted plants. We observed the bi-directional translocation of LUC proteins in transgrafted tobacco plants, i.e., from the rootstock to scion and vice versa. Transcriptomic analysis revealed that transcripts of the LUC gene were undetectable in non-GM plant bodies, indicating that the LUC protein itself was translocated. Moreover, the movement of the LUC protein is an episodic (i.e., non-continuous) event, since non-GM samples showing high LUC activity were flanked by non-GM samples showing no apparent LUC activity. Translocation from the GM to non-GM part depends on the characteristics of GM plant bodies; here, the enhanced translocation of the LUC protein into the non-GM scion was observed when LUC-expressing rootstocks with hairy roots were used. Moreover, the quantity of translocated LUC protein was far below the level that is generally required to induce an allergenic response. Finally, since the LUC protein levels of plants used for transgrafting are moderate and the LUC protein itself is relatively unstable, further investigation is necessary regarding whether the newly expressed protein in GM plants is highly stable, easily translocated, and/or highly expressed.
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Affiliation(s)
- Taira Miyahara
- Graduate School of Horticulture, Chiba University, 1-33
Yayoi-cho, Inage-ku, Chiba 263-8522, Japan
| | - Hitomi Ohkubo
- Graduate School of Horticulture, Chiba University, 1-33
Yayoi-cho, Inage-ku, Chiba 263-8522, Japan
| | - Yukiko Umeyama
- Graduate School of Horticulture, Chiba University, 1-33
Yayoi-cho, Inage-ku, Chiba 263-8522, Japan
| | - Taichi Oguchi
- Institute of Life and Environmental Sciences, University of
Tsukuba, 1-1-1 Tennodai, Tsukuba, Ibaraki 305-8572, Japan
- Tsukuba Plant Innovation Research Center, University of Tsukuba,
1-1-1 Tennodai, Tsukuba, Ibaraki 305-8572, Japan
| | - Takumi Ogawa
- Graduate School of Agriculture, Osaka Metropolitan University,
1-1 Gakuen-cho, Naka-ku, Sakai,Osaka 599-8531, Japan
- Graduate School of Life and Environmental Sciences, Osaka
Prefecture University, 1-1 Gakuen-cho, Naka-ku, Sakai, Osaka 599-8531, Japan
| | - Daisaku Ohta
- Graduate School of Agriculture, Osaka Metropolitan University,
1-1 Gakuen-cho, Naka-ku, Sakai,Osaka 599-8531, Japan
- Graduate School of Life and Environmental Sciences, Osaka
Prefecture University, 1-1 Gakuen-cho, Naka-ku, Sakai, Osaka 599-8531, Japan
| | - Tomofumi Mochizuki
- Graduate School of Agriculture, Osaka Metropolitan University,
1-1 Gakuen-cho, Naka-ku, Sakai,Osaka 599-8531, Japan
- Graduate School of Life and Environmental Sciences, Osaka
Prefecture University, 1-1 Gakuen-cho, Naka-ku, Sakai, Osaka 599-8531, Japan
| | - Hiroaki Kodama
- Graduate School of Horticulture, Chiba University, 1-33
Yayoi-cho, Inage-ku, Chiba 263-8522, Japan
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11
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Yuan M, Jin T, Wu J, Li L, Chen G, Chen J, Wang Y, Sun J. IAA-miR164a-NAC100L1 module mediates symbiotic incompatibility of cucumber/pumpkin grafted seedlings through regulating callose deposition. HORTICULTURE RESEARCH 2024; 11:uhad287. [PMID: 38371634 PMCID: PMC10873582 DOI: 10.1093/hr/uhad287] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/29/2023] [Accepted: 12/17/2023] [Indexed: 02/20/2024]
Abstract
Grafting is one of the key technologies to overcome the obstacles of continuous cropping, and improve crop yield and quality. However, the symbiotic incompatibility between rootstock and scion affects the normal growth and development of grafted seedlings after survival. The specific molecular regulation mechanism of graft incompatibility is still largely unclear. In this study, we found that the IAA-miR164a-NAC100L1 module induced callose deposition to mediate the symbiotic incompatibility of cucumber/pumpkin grafted seedlings. The incompatible combination (IG) grafting interface accumulated more callose, and the activity of callose synthase (CmCalS1) and IAA content were significantly higher than in the compatible combination (CG). Treatment with IAA polar transport inhibitor in the root of the IG plants decreased CmCalS activity and callose content. Furthermore, IAA negatively regulated the expression of Cm-miR164a, which directly targeted cleavage of CmNAC100L1. Interestingly, CmNAC100L1 interacted with CmCalS1 to regulate its activity. Further analysis showed that the interaction between CmNAC100L1 and CmCalS1 increased the activity of CmCalS1 in the IG plants but decreased it in the CG plants. Point mutation analysis revealed that threonine at the 57th position of CmCalS1 protein played a critical role to maintain its enzyme activity in the incompatible rootstock. Thus, IAA inhibited the expression of Cm-miR164a to elevate the expression of CmNAC100L1, which promoted CmNAC100L1 interaction with CmCalS1 to enhance CmCalS1 activity, resulting in callose deposition and symbiotic incompatibility of cucumber/pumpkin grafted seedlings.
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Affiliation(s)
- Mingzhu Yuan
- College of Horticulture, Nanjing Agricultural University, Nanjing 210095, China
| | - Tong Jin
- College of Horticulture, Nanjing Agricultural University, Nanjing 210095, China
| | - Jianqiang Wu
- College of Horticulture, Nanjing Agricultural University, Nanjing 210095, China
| | - Lan Li
- College of Horticulture, Nanjing Agricultural University, Nanjing 210095, China
| | - Guangling Chen
- College of Horticulture, Nanjing Agricultural University, Nanjing 210095, China
| | - Jiaqi Chen
- College of Horticulture, Nanjing Agricultural University, Nanjing 210095, China
| | - Yu Wang
- College of Horticulture, Nanjing Agricultural University, Nanjing 210095, China
| | - Jin Sun
- College of Horticulture, Nanjing Agricultural University, Nanjing 210095, China
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12
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Lebedev V. Impact of Intron and Retransformation on Transgene Expression in Leaf and Fruit Tissues of Field-Grown Pear Trees. Int J Mol Sci 2023; 24:12883. [PMID: 37629068 PMCID: PMC10454629 DOI: 10.3390/ijms241612883] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2023] [Revised: 07/26/2023] [Accepted: 08/15/2023] [Indexed: 08/27/2023] Open
Abstract
Stable and high expression of introduced genes is a prerequisite for using transgenic trees. Transgene stacking enables combining several valuable traits, but repeated transformation increases the risk of unintended effects. This work studied the stability and intron-mediated enhancement of uidA gene expression in leaves and different anatomical parts of pear fruits during field trials over 14 years. The stability of reporter and herbicide resistance transgenes in retransformed pear plants, as well as possible unintended effects using high-throughput phenotyping tools, were also investigated. The activity of β-glucuronidase (GUS) varied depending on the year, but silencing did not occur. The uidA gene was expressed to a maximum in seeds, slightly less in the peel and peduncles, and much less in the pulp of pear fruits. The intron in the uidA gene stably increased expression in leaves and fruits by approximately twofold. Retransformants with the bar gene showed long-term herbicide resistance and exhibited no consistent changes in leaf size and shape. The transgenic pear was used as rootstock and scion, but grafted plants showed no transport of the GUS protein through the graft in the greenhouse and field. This longest field trial of transgenic fruit trees demonstrates stable expression under varying environmental conditions, the expression-enhancing effect of intron and the absence of unintended effects in single- and double-transformed woody plants.
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Affiliation(s)
- Vadim Lebedev
- Branch of the Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry of the Russian Academy of Sciences, 142290 Pushchino, Russia
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13
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Rashedy AA, Hamed HH. Morphological, physio-biochemical and nutritional status as potential markers for grafting compatibility in Kalamata olive cultivar. BMC PLANT BIOLOGY 2023; 23:334. [PMID: 37349698 DOI: 10.1186/s12870-023-04346-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/13/2023] [Accepted: 06/13/2023] [Indexed: 06/24/2023]
Abstract
BACKGROUND Choosing the most compatible and desirable rootstock for Kalamata olive cultivar is an important decision due to the longevity of the orchard and the difficulty rooting of Kalamata cuttings. Therefore, the goal of this study was to examine the morphological, physio-biochemical, and nutritional status as ppotential markers for grafting compatibility between Kalamata olive cultivar and three olive rootstocks (Coratina, Picual, Manzanillo) during two seasons (2020-2021) as well as follow up physio-bichemical and nutritional status of one-year-old Kalamata plants (2022). RESULTS The results indicated that, Picual rootstock recorded the highest significant grafting success which was associated with increasing number of leaves, leaf area and SPAD value in Kalamata scions by 22.15%, 36.86% and 14.64% compared to Manzanillo rootstock as mean of both seasons, respectively. While, Manzanillo rootstock recorded the highest significant activity for peroxidase and catalase by 51.41% and 60.1% at grafting union compared to Picual rootstock. Moreover, Picual rootstock for Kalamata scions had the highest acid invertase and sucrose synthase activities by 67.23% and 57.94% compared to Manzanillo rootstock. Furthermore, Picual rootstock recorded the highest significant Gibberellic acid by 52.8% and 18.6% compared to Coratina and Manzanillo rootstocks. Meanwhile, Picual rootstock recorded the lowest significant Abscisic acid by 68.17% and 63.15% as well as the lowest total phenols by 14.36% and 23.47% compared to Coratina and Manzanillo rootstocks. CONCLUSIONS This study sheds light for the importance of choosing the suitable rootstock for Kalamata cultivar. Also, sucrose synthase and acid invertase may have a novel role in determining grafting compatibility in olives. Increasing growth promoters (Gibberellic, Nitrogen) and decreasing both growth inhibitors (Abscisic, phenols) and oxidative enzyme (catalase, peroxidase) required for better graft compatibility.
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Affiliation(s)
| | - Hamed Hosni Hamed
- Pomology department, Faculty of Agriculture, Cairo University, Giza, Egypt
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14
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He W, Luo L, Xie R, Chai J, Wang H, Wang Y, Chen Q, Wu Z, Yang S, Li M, Lin Y, Zhang Y, Luo Y, Zhang Y, Tang H, Wang X. Genome-Wide Identification and Functional Analysis of the AP2/ERF Transcription Factor Family in Citrus Rootstock under Waterlogging Stress. Int J Mol Sci 2023; 24:ijms24108989. [PMID: 37240335 DOI: 10.3390/ijms24108989] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/11/2023] [Revised: 05/03/2023] [Accepted: 05/16/2023] [Indexed: 05/28/2023] Open
Abstract
Citrus plants are sensitive to waterlogging, and the roots are the first plant organ affected by hypoxic stress. The AP2/ERF (APETALA2/ethylene-responsive element binding factors) can modulate plant growth and development. However, the information on AP2/ERF genes in citrus rootstock and their involvement in waterlogging conditions is limited. Previously, a rootstock cultivar, Citrus junos cv. Pujiang Xiangcheng was found to be highly tolerant to waterlogging stress. In this study, a total of 119 AP2/ERF members were identified in the C. junos genome. Conserved motif and gene structure analyses indicated the evolutionary conservation of PjAP2/ERFs. Syntenic gene analysis revealed 22 collinearity pairs among the 119 PjAP2/ERFs. The expression profiles under waterlogging stress showed differential expression of PjAP2/ERFs, of which, PjERF13 was highly expressed in both root and leaf. Furthermore, the heterologous expression of PjERF13 significantly enhanced the tolerance of transgenic tobacco to waterlogging stress. The overexpression of PjERF13 decreased the oxidative damage in the transgenic plants by reducing the H2O2 and MDA contents and increasing the antioxidant enzyme activities in the root and leaf. Overall, the current study provided basic information on the AP2/ERF family in the citrus rootstock and uncovered their potential function in positively regulating the waterlogging stress response.
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Affiliation(s)
- Wen He
- College of Horticulture, Sichuan Agricultural University, Chengdu 611130, China
| | - Liang Luo
- College of Horticulture, Sichuan Agricultural University, Chengdu 611130, China
| | - Rui Xie
- College of Horticulture, Sichuan Agricultural University, Chengdu 611130, China
| | - Jiufeng Chai
- College of Horticulture, Sichuan Agricultural University, Chengdu 611130, China
| | - Hao Wang
- College of Horticulture, Sichuan Agricultural University, Chengdu 611130, China
| | - Yan Wang
- College of Horticulture, Sichuan Agricultural University, Chengdu 611130, China
| | - Qing Chen
- College of Horticulture, Sichuan Agricultural University, Chengdu 611130, China
| | - Zhiwei Wu
- College of Horticulture, Sichuan Agricultural University, Chengdu 611130, China
| | - Shaofeng Yang
- College of Horticulture, Sichuan Agricultural University, Chengdu 611130, China
| | - Mengyao Li
- College of Horticulture, Sichuan Agricultural University, Chengdu 611130, China
| | - Yuanxiu Lin
- College of Horticulture, Sichuan Agricultural University, Chengdu 611130, China
| | - Yunting Zhang
- College of Horticulture, Sichuan Agricultural University, Chengdu 611130, China
| | - Ya Luo
- College of Horticulture, Sichuan Agricultural University, Chengdu 611130, China
| | - Yong Zhang
- College of Horticulture, Sichuan Agricultural University, Chengdu 611130, China
| | - Haoru Tang
- College of Horticulture, Sichuan Agricultural University, Chengdu 611130, China
| | - Xiaorong Wang
- College of Horticulture, Sichuan Agricultural University, Chengdu 611130, China
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15
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Kuzin A, Solovchenko A, Khort D, Filippov R, Lukanin V, Lukina N, Astashev M, Konchekov E. Effects of Plasma-Activated Water on Leaf and Fruit Biochemical Composition and Scion Growth in Apple. PLANTS (BASEL, SWITZERLAND) 2023; 12:plants12020385. [PMID: 36679098 PMCID: PMC9865715 DOI: 10.3390/plants12020385] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/28/2022] [Revised: 01/09/2023] [Accepted: 01/11/2023] [Indexed: 05/13/2023]
Abstract
The application of plasma-activated water (PAW) in agriculture has gained the attention of researchers and practitioners. In particular, treatment with PAW is a promising method for increasing scion and rootstock survival as well as augmenting the mineral nutrition applicable to tree fruit crops. However, the applications of PAW are hampered by the lack of information about the effects of PAW on apple tree condition and yield. The increase in survival rate by PAW is believed to stem from the general stimulation of physiological processes in the plant tissue. To assess the actual effect of the PAW treatments, one needs to consider an important indicator of young tree quality such as their vegetative growth. We conducted field experiments to study the possibility of use of PAW for increase in primary nutrient contents in fruits and leaves in an orchard, as well as to assess the scion survival rate and vegetative growth of young grafts in a nursery. The application of PAW influenced the fruitset, yield, leaf nitrogen (N) and potassium (K), fruit phosphorus (P), calcium (Ca) ascorbic acid (AA) and titratable acidity (TA). Treatment with PAW did not significantly reduce the negative impact of the rootstock thickness on the survival rate of bench grafts and their subsequent development. At the same time, scion survival tended to increase in the case when the scions and the rootstocks were of compatible thickness. Further studies of the PAW treatment effects are needed to better understand its applicability in diverse fields of horticulture.
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Affiliation(s)
- Andrei Kuzin
- Michurin Federal Scientific Center, 393766 Michurinsk, Russia
- Fruit and Vegetable Growing Department, Michurinsk State Agrarian University, 393766 Michurinsk, Russia
- Correspondence:
| | - Alexei Solovchenko
- Faculty of Biology, Lomonosov Moscow State University, 119234 Moscow, Russia
- Federal Scientific Agroengineering Center VIM, 109428 Moscow, Russia
| | - Dmitry Khort
- Federal Scientific Agroengineering Center VIM, 109428 Moscow, Russia
| | | | - Vladimir Lukanin
- Prokhorov General Physics Institute of the Russian Academy of Sciences, 119991 Moscow, Russia
| | - Natalya Lukina
- Prokhorov General Physics Institute of the Russian Academy of Sciences, 119991 Moscow, Russia
| | - Maxim Astashev
- Prokhorov General Physics Institute of the Russian Academy of Sciences, 119991 Moscow, Russia
| | - Evgeny Konchekov
- Prokhorov General Physics Institute of the Russian Academy of Sciences, 119991 Moscow, Russia
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16
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Gu Q, Wei Q, Hu Y, Chen M, Chen Z, Zheng S, Ma Q, Luo Z. Physiological and Full-Length Transcriptome Analyses Reveal the Dwarfing Regulation in Trifoliate Orange ( Poncirus trifoliata L.). PLANTS (BASEL, SWITZERLAND) 2023; 12:271. [PMID: 36678984 PMCID: PMC9860739 DOI: 10.3390/plants12020271] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/30/2022] [Revised: 01/01/2023] [Accepted: 01/03/2023] [Indexed: 06/17/2023]
Abstract
Dwarfing rootstocks are capable of high-density planting and are therefore urgently needed in the modern citrus cultivation system. However, little is known about the physiological relevance and molecular basis underlying citrus height. This study aimed to comprehensively analyze phytohormone, carbohydrate, and associated transcriptome changes in the stem of two weak growth rootstocks ('TO' and 'FD') relative to the vigorous 'CC' rootstock. The phenotypic observation revealed that the plant height, plant weight, and internode length were reduced in dwarfing rootstocks. Moreover, the contents of indole-3-acetic acid (IAA), trans-zeatin (tZ), and abscisic acid (ABA), were higher in TO and FD rootstocks, whereas the gibberellin 3 (GA3) content was higher in the CC rootstocks. The carbohydrate contents, including sucrose, fructose, glucose, starch, and lignin significantly decreased in both the TO and FD rootstocks. The full-length transcriptome analysis revealed a potential mechanism regulating dwarfing phenotype that was mainly related to the phytohormone signaling transduction, sugar and starch degradation, lignin synthesis, and cellulose and hemicellulose degradation processes. In addition, many transcription factors (TFs), long non-coding RNAs (lncRNAs), and alternative splicing (AS) events were identified, which might act as important contributors to control the stem elongation and development in the weak growth rootstocks. These findings might deepen the understanding of the complex mechanisms of the stem development responsible for citrus dwarfing and provide a series of candidate genes for the application in breeding new rootstocks with intensive dwarfing.
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Affiliation(s)
- Qingqing Gu
- Key Laboratory of Horticultural Plant Biology, Huazhong Agricultural University, Wuhan 430070, China
- College of Agronomy, Jiangxi Agricultural University, Nanchang 330045, China
| | - Qingjiang Wei
- College of Agronomy, Jiangxi Agricultural University, Nanchang 330045, China
| | - Yongwei Hu
- College of Agronomy, Jiangxi Agricultural University, Nanchang 330045, China
| | - Mengru Chen
- College of Agronomy, Jiangxi Agricultural University, Nanchang 330045, China
| | - Ziwen Chen
- College of Agronomy, Jiangxi Agricultural University, Nanchang 330045, China
| | - Shuang Zheng
- College of Agronomy, Jiangxi Agricultural University, Nanchang 330045, China
| | - Qiaoli Ma
- College of Agronomy, Jiangxi Agricultural University, Nanchang 330045, China
| | - Zhengrong Luo
- Key Laboratory of Horticultural Plant Biology, Huazhong Agricultural University, Wuhan 430070, China
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17
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Pandeya D, Campbell LM, Puckhaber L, Suh C, Rathore KS. Gossypol and related compounds are produced and accumulate in the aboveground parts of the cotton plant, independent of roots as the source. PLANTA 2022; 257:21. [PMID: 36538120 DOI: 10.1007/s00425-022-04049-0] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/04/2022] [Accepted: 12/09/2022] [Indexed: 06/17/2023]
Abstract
Use of Ultra-low gossypol cottonseed event as a scion in a graft combination confirmed that roots are not a source of terpenoids in the aboveground parts of a cotton plant. Gossypol and related terpenoids, derived from the same basic biosynthetic pathway, are present in the numerous lysigenous glands in the aboveground parts of a cotton plant. Roots, with sparse presence of such glands, do produce significant amount of gossypol and a different set of terpenoids. These compounds serve a defensive function against various pests and pathogens. This investigation was undertaken to examine whether gossypol produced in the roots can replenish the gossypol content of the cottonseed-glands that are largely devoid of this terpenoid in a genetically engineered event. Graft unions between a scion derived from the RNAi-based, Ultra-low gossypol cottonseed (ULGCS) event, TAM66274, and a rootstock derived from wild-type parental genotype, Coker 312 (Coker), were compared with various other grafts that served as controls. The results showed that the seeds developing within the scion of test grafts (ULGCS/Coker) continued to maintain the ultra-low gossypol levels found in the TAM66274 seeds. Molecular analyses confirmed that while the key gene involved in gland development showed normal activity in the developing embryos in the scion, two genes encoding the enzymes involved in gossypol biosynthesis were suppressed. Thus, the gene expression data confirmed the results obtained from biochemical measurements and collectively demonstrated that roots are not a source of gossypol for the aboveground parts of the cotton plant. These findings, combined with the results from previous investigations, support the assertion that gossypol and related terpenoids are produced in a highly localized manner in various organs of the cotton plant and are retained therein.
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Affiliation(s)
- Devendra Pandeya
- Department of Soil & Crop Sciences, Texas A & M University, College Station, TX, USA
| | - LeAnne M Campbell
- Department of Soil & Crop Sciences, Texas A & M University, College Station, TX, USA
| | - Lorraine Puckhaber
- Southern Plains Agricultural Research Center, USDA-ARS, College Station, TX, USA
| | - Charles Suh
- Southern Plains Agricultural Research Center, USDA-ARS, College Station, TX, USA
| | - Keerti S Rathore
- Department of Soil & Crop Sciences, Texas A & M University, College Station, TX, USA.
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Genetic Relationship, SPAD Reading, and Soluble Sugar Content as Indices for Evaluating the Graft Compatibility of Citrus Interstocks. BIOLOGY 2022; 11:biology11111639. [PMID: 36358340 PMCID: PMC9687967 DOI: 10.3390/biology11111639] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/23/2022] [Revised: 11/07/2022] [Accepted: 11/07/2022] [Indexed: 11/11/2022]
Abstract
Simple Summary Grafting is a critical agricultural practice in citrus growing. The effectiveness of grafting not only depends on the technique but also on the stock–scion combinations. In this study, we investigated the grafting compatibility of five interstock combinations based on physiological and biochemical traits. The results revealed that the grafting compatibility in the early stages of grafting mediated by interstocks was related to the genetic relationship. The leaf chlorophyll content (SPAD reading, soil plant analysis development) and soluble sugar could be employed as preselected indicators to assess compatibility in the late stage of grafting. Our findings lay the foundation for the further research on rootstock–scion interaction mechanism. Abstract The interstock, a stock between the rootstock and scion, has a significant regulatory effect on the stock and scion, and its function is highly dependent on graft compatibility. To assess the graft compatibility of the interstock and scion, ‘Yuanxiaochun’ was top grafted onto ‘Ponkan’, ‘Shiranuhi’, ‘Harumi’, ‘Tarocco’, and ‘Kumquat’. The results showed significant differences in the survival ratio and preservation ratio among different combinations. Grafting compatibility in the early stages of grafting was associated with the genetic relationship. The biomass accumulation revealed that the interstock could influence both the rootstock and the scion. The physiological and biochemical traits analysis suggested that SPAD reading and soluble sugar could be employed as preselected indices to evaluate graft compatibility in the late stage of grafting. These results indicated that the evaluation of graft compatibility was a dynamic process. The findings provided a new approach for studying the stock and scion interaction mechanisms mediated by interstock, and directly provided a theoretical and practical basis for the high-grafting of ‘Yuanxiaochun’ citrus.
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Liao L, Li Y, Bi X, Xiong B, Wang X, Deng H, Zhang M, Sun G, Jin Z, Huang Z, Wang Z. Transcriptome analysis of Harumi tangor fruits: Insights into interstock-mediated fruit quality. FRONTIERS IN PLANT SCIENCE 2022; 13:995913. [PMID: 36311145 PMCID: PMC9608513 DOI: 10.3389/fpls.2022.995913] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/16/2022] [Accepted: 09/30/2022] [Indexed: 05/27/2023]
Abstract
Harumi tangor fruit with Ponkan as an interstock contains significantly higher levels of total soluble solids compared to Harumi tangor fruit cv.with no interstock. Transcriptome analysis of two graft combinations (Harumi/Hongjv (HP) and cv. cv.Harumi/Ponkan/Hongjv (HPP)) was conducted to identify the genes related to use of the Ponkan interstock. Soluble sugars and organic acids were also measured in the two graft combinations. The results showed that the contents of sucrose, glucose, and fructose were higher in the fruits of HPP than in those of HP; additionally, the titratable acid levels were lower in grafts with interstocks than in grafts without interstocks. Transcriptome analysis of HPP and HP citrus revealed that the interstock regulated auxin and ethylene signals, sugar and energy metabolism, and cell wall metabolism. Trend and Venn analyses suggested that genes related to carbohydrate-, energy-, and hormone-metabolic activities were more abundant in HPP plants than in HP plants during different periods. Moreover, weighted gene co-expression network analysis demonstrated that carbohydrates, hormones, cell wall, and transcription factors may be critical for interstock-mediated citrus fruit development and ripening. The contents of ethylene, auxin, cytokinin, transcription factors, starch, sucrose, glucose, fructose, and total sugar in HPP plants differed considerably than those in HP fruits. Interstocks may help to regulate the early ripening and quality of citrus fruit through the above-mentioned pathways. These findings provide information on the effects of interstock on plant growth and development.
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Affiliation(s)
- Ling Liao
- College of Horticulture, Sichuan Agricultural University, Chengdu, China
| | - Yunjie Li
- College of Horticulture, Sichuan Agricultural University, Chengdu, China
| | - Xiaoyi Bi
- College of Horticulture, Sichuan Agricultural University, Chengdu, China
| | - Bo Xiong
- College of Horticulture, Sichuan Agricultural University, Chengdu, China
| | - Xun Wang
- Institute of Pomology and Olericulture, Sichuan Agricultural University, Chengdu, China
| | - Honghong Deng
- Institute of Pomology and Olericulture, Sichuan Agricultural University, Chengdu, China
| | - Mingfei Zhang
- College of Horticulture, Sichuan Agricultural University, Chengdu, China
| | - Guochao Sun
- Institute of Pomology and Olericulture, Sichuan Agricultural University, Chengdu, China
| | - Zhenghua Jin
- College of Horticulture, Sichuan Agricultural University, Chengdu, China
| | - Zehao Huang
- College of Horticulture, Sichuan Agricultural University, Chengdu, China
| | - Zhihui Wang
- College of Horticulture, Sichuan Agricultural University, Chengdu, China
- Institute of Pomology and Olericulture, Sichuan Agricultural University, Chengdu, China
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Yang L, Xia L, Zeng Y, Han Q, Zhang S. Grafting enhances plants drought resistance: Current understanding, mechanisms, and future perspectives. FRONTIERS IN PLANT SCIENCE 2022; 13:1015317. [PMID: 36275555 PMCID: PMC9583147 DOI: 10.3389/fpls.2022.1015317] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/09/2022] [Accepted: 09/20/2022] [Indexed: 05/28/2023]
Abstract
Drought, one of the most severe and complex abiotic stresses, is increasingly occurring due to global climate change and adversely affects plant growth and yield. Grafting is a proven and effective tool to enhance plant drought resistance ability by regulating their physiological and molecular processes. In this review, we have summarized the current understanding, mechanisms, and perspectives of the drought stress resistance of grafted plants. Plants resist drought through adaptive changes in their root, stem, and leaf morphology and structure, stomatal closure modulation to reduce transpiration, activating osmoregulation, enhancing antioxidant systems, and regulating phytohormones and gene expression changes. Additionally, the mRNAs, miRNAs and peptides crossing the grafted healing sites also confer drought resistance. However, the interaction between phytohormones, establishment of the scion-rootstock communication through genetic materials to enhance drought resistance is becoming a hot research topic. Therefore, our review provides not only physiological evidences for selecting drought-resistant rootstocks or scions, but also a clear understanding of the potential molecular effects to enhance drought resistance using grafted plants.
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Affiliation(s)
- Le Yang
- Key Laboratory of Bio-Resource and Eco-Environment of Ministry of Education, College of Life Sciences, Sichuan University, Chengdu, China
| | - Linchao Xia
- Key Laboratory of Bio-Resource and Eco-Environment of Ministry of Education, College of Life Sciences, Sichuan University, Chengdu, China
| | - Yi Zeng
- Key Laboratory of Bio-Resource and Eco-Environment of Ministry of Education, College of Life Sciences, Sichuan University, Chengdu, China
| | - Qingquan Han
- Key Laboratory of Bio-Resource and Eco-Environment of Ministry of Education, College of Life Sciences, Sichuan University, Chengdu, China
- The Engineering Research Institute of Agriculture and Forestry, Ludong University, Yantai, China
| | - Sheng Zhang
- Key Laboratory of Bio-Resource and Eco-Environment of Ministry of Education, College of Life Sciences, Sichuan University, Chengdu, China
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Sun J, Chen J, Si X, Liu W, Yuan M, Guo S, Wang Y. WRKY41/WRKY46-miR396b-5p-TPR module mediates abscisic acid-induced cold tolerance of grafted cucumber seedlings. FRONTIERS IN PLANT SCIENCE 2022; 13:1012439. [PMID: 36160963 PMCID: PMC9493262 DOI: 10.3389/fpls.2022.1012439] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/05/2022] [Accepted: 08/23/2022] [Indexed: 06/01/2023]
Abstract
Grafting is one of the key agronomic measures to enhance the tolerance to environmental stresses in horticultural plants, but the specific molecular regulation mechanism in this tolerance largely remains unclear. Here, we found that cucumber grafted onto figleaf gourd rootstock increased cold tolerance through abscisic acid (ABA) activating WRKY41/WRKY46-miR396b-5p-TPR (tetratricopeptide repeat-like superfamily protein) module. Cucumber seedlings grafted onto figleaf gourd increased cold tolerance and induced the expression of miR396b-5p. Furthermore, overexpression of cucumber miR396b-5p in Arabidopsis improved cold tolerance. 5' RNA ligase-mediated rapid amplification of cDNA ends (5' RLM-RACE) and transient transformation experiments demonstrated that TPR was the target gene of miR396b-5p, while TPR overexpression plants were hypersensitive to cold stress. The yeast one-hybrid and dual-luciferase assays showed that both WRKY41 and WRKY46 bound to MIR396b-5p promoter to induce its expression. Furthermore, cold stress enhanced the content of ABA in the roots and leaves of figleaf gourd grafted cucumber seedlings. Exogenous application of ABA induced the expression of WRKY41 and WRKY46, and cold tolerance of grafted cucumber seedlings. However, figleaf gourd rootstock-induced cold tolerance was compromised when plants were pretreated with ABA biosynthesis inhibitor. Thus, ABA mediated figleaf gourd grafting-induced cold tolerance of cucumber seedlings through activating the WRKY41/WRKY46-miR396b-5p-TPR module.
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