1
|
Zhang B, Sun Q, Chen Z, Shu F, Chen J. Evaluation of zinc tolerance and accumulation in eight cultivars of bermudagrass (Cynodon spp.): implications for zinc phytoremediation. Biometals 2023; 36:1377-1390. [PMID: 37530928 DOI: 10.1007/s10534-023-00524-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/15/2022] [Accepted: 07/24/2023] [Indexed: 08/03/2023]
Abstract
Zinc (Zn) is a vital element for plant growth and development, however, excessive Zn is toxic to plants. Common bermudagrass (Cynodon dactylon (L.) Pers.) and hybrid bermudagrass (C. dactylon (L.) Pers. × C. transvaalensis Burtt-Davy) are widely used turfgrass species with strong tolerance to diverse abiotic stresses, including excessive Zn2+ stress. However, the variation of zinc tolerance and accumulation in different bermudagrass cultivars remain unclear. In this study, we systematically analyzed the growth performance, physiological index and ion concentration in eight commercial cultivars of common and hybrid bermudagrass under different concentration of Zn2+ treatments using pot experiments. The results indicated that four cultivars of common bermudagrass could tolerate 20 mM Zn2+, whereas four cultivars of hybrid bermudagrass could only tolerate 10 mM Zn2+. Among the four common bermudagrass cultivars, cultivar Guanzhong and Common showed stronger Zn tolerance and accumulation abilities than other two cultivars. Further analyses of the expression of selected Zn homeostasis-related genes indicated that bermudagrass cultivars with stronger tolerance to excessive Zn have at least one expression-elevated gene involved in Zn homeostasis. These results not only expanded our understanding of Zn tolerance and accumulation in bermudagrass but also facilitated the application of commercial bermudagrass cultivars in phytoremediation of Zn pollution.
Collapse
Affiliation(s)
- Bing Zhang
- College of Animal Science and Technology, Yangzhou University, Yangzhou, 225009, China.
| | - Qixue Sun
- College of Animal Science and Technology, Yangzhou University, Yangzhou, 225009, China
| | - Zhuoting Chen
- College of Animal Science and Technology, Yangzhou University, Yangzhou, 225009, China
| | - Fangzhi Shu
- College of Animal Science and Technology, Yangzhou University, Yangzhou, 225009, China
| | - Jingbo Chen
- Institute of Botany, Jiangsu Province and Chinese Academy of Sciences, Nanjing, 210014, China
| |
Collapse
|
2
|
Zhou Y, Liu X, Yang X, Du Laing G, Yang Y, Tack FMG, Bank MS, Bundschuh J. Effects of Platinum Nanoparticles on Rice Seedlings ( Oryza sativa L.): Size-dependent Accumulation, Transformation, and Ionomic Influence. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2023; 57:3733-3745. [PMID: 36821792 DOI: 10.1021/acs.est.2c07734] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/18/2023]
Abstract
Platinum nanoparticles (PtNPs) are increasing in the environment largely due to their wide use and application in automobile and medical industries. The mechanism of uptake behavior of different-sized PtNPs and their association with PtNPs-induced phytotoxicity to plants remains unclear. The present study investigated PtNP uptake mechanisms and phytotoxicity simultaneously to further understand the accumulation and transformation dynamics. The uptake mechanisms were investigated by comparing the uptake and toxicological effects of three different-sized PtNPs (25, 50, and 70 nm) on rice seedlings across an experimental concentration gradient (0.25, 0.5, and 1 mg/L) during germination. The quantitative and qualitative results indicated that 70 nm-sized PtNPs were more efficiently transferred in rice roots. The increase in the PtNP concentration restricted the particle uptake. Particle aggregation was common in plant cells and tended to dissolve on root surfaces. Notably, the dissolution of small particles was simultaneous with the growth of larger particles after PtNPs entered the rice tissues. Ionomic results revealed that PtNP accumulation induced element homeostasis in the shoot ionome. We observed a significant positive correlation between the PtNP concentration and Fe and B accumulation in rice shoots. Compared to particle size, the exposure concentration of PtNPs had a stronger effect on the shoot ionomic response. Our study provides better understanding of the correlation of ionomic change and NP quantitative accumulation induced by PtNPs in rice seedlings.
Collapse
Affiliation(s)
- Yaoyu Zhou
- College of the Environment and Ecology, Hunan Agricultural University, Changsha 410128, China
| | - Xin Liu
- College of the Environment and Ecology, Hunan Agricultural University, Changsha 410128, China
| | - Xiao Yang
- Key Laboratory of Land Surface Pattern and Simulation, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing 100101, China
| | - Gijs Du Laing
- Department of Green Chemistry and Technology, Ghent University, Coupure Links 653, 9000 Ghent, Belgium
| | - Yuan Yang
- College of the Environment and Ecology, Hunan Agricultural University, Changsha 410128, China
| | - Filip M G Tack
- Department Green Chemistry and Technology, Faculty of Bioscience Engineering, Ghent University, Ghent B-9000, Belgium
| | - Michael S Bank
- Institute of Marine Research, Bergen NO.5817, Norway
- University of Massachusetts Amherst, Amherst, Massachusetts 01003, United States
| | - Jochen Bundschuh
- Doctoral Program in Science, Technology, Environment, and Mathematics. Department of Earth and Environmental Sciences, National Chung Cheng University, 168 University Rd., Min-Hsiung, Chiayi County 62102, Taiwan, ROC
- School of Civil Engineering and Surveying, University of Southern Queensland, West Street, Toowoomba, Queensland 4350, Australia
| |
Collapse
|
3
|
Noda Y, Furukawa J, Suzui N, Yin YG, Matsuoka K, Kawachi N, Satoh S. Characterization of zinc uptake and translocation visualized with positron-emitting 65Zn tracer and analysis of transport-related gene expression in two Lotus japonicus accessions. ANNALS OF BOTANY 2022; 130:799-810. [PMID: 35948001 PMCID: PMC9758300 DOI: 10.1093/aob/mcac101] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/13/2022] [Accepted: 08/08/2022] [Indexed: 06/15/2023]
Abstract
BACKGROUND AND AIMS Zinc (Zn) is an essential element for humans and plants. However, Zn deficiency is widespread and 25 % of the world's population is at risk of Zn deficiency. To overcome the deficiency of Zn intake, crops with high Zn content are required. However, most crop-producing areas have Zn-deficient soils, therefore crops with excellent Zn uptake/transport characteristics (i.e. high Zn efficiency) are needed. Our objective was to identify the crucial factors responsible for high Zn efficiency in the legume Lotus japonicus. METHODS We evaluated Zn efficiency by static and real-time visualization of radioactive Zn (65Zn) uptake/transport in two L. japonicus accessions, MG-20 and B-129, that differ in Zn efficiency. The combination of visualization methods verified the dynamics of Zn accumulation and transport within the plant. We compared gene expression under a normal Zn concentration (control) and Zn deficiency to evaluate genetic factors that may determine the differential Zn efficiency of the accessions. KEY RESULTS The accession B-129 accumulated almost twice the amount of Zn as MG-20. In the static 65Zn images, 65Zn accumulated in meristematic tissues, such as root tips and the shoot apex, in both accessions. The positron-emitting tracer imaging system (PETIS), which follows the transport process in real time, revealed that 65Zn transport to the shoot was more rapid in B-129 than in MG-20. Many genes associated with Zn uptake and transport were more highly expressed in B-129 than in MG-20 under the control condition. These gene expression patterns under Zn deficiency differed from those under the control Zn condition. CONCLUSIONS PETIS confirmed that the real-time transport of 65Zn to the shoot was faster in B-129 than in MG-20. The high Zn efficiency of B-129 may be due to the elevated expression of a suite of Zn uptake- and transport-related genes.
Collapse
Affiliation(s)
- Yusaku Noda
- Takasaki Advanced Radiation Research Institute, National Institutes for Quantum Science and Technology (QST), Gunma, 370-1292Japan
| | - Jun Furukawa
- Faculty of Life and Environmental Sciences, University of Tsukuba, Ibaraki, 305-8572Japan
| | - Nobuo Suzui
- Takasaki Advanced Radiation Research Institute, National Institutes for Quantum Science and Technology (QST), Gunma, 370-1292Japan
| | - Yong-Gen Yin
- Takasaki Advanced Radiation Research Institute, National Institutes for Quantum Science and Technology (QST), Gunma, 370-1292Japan
| | - Keita Matsuoka
- Graduate School of Life and Environmental Sciences, University of Tsukuba, Ibaraki, 305-8572Japan
| | - Naoki Kawachi
- Takasaki Advanced Radiation Research Institute, National Institutes for Quantum Science and Technology (QST), Gunma, 370-1292Japan
| | - Shinobu Satoh
- Faculty of Life and Environmental Sciences, University of Tsukuba, Ibaraki, 305-8572Japan
| |
Collapse
|
4
|
Kolbert Z, Cuypers A, Verbruggen N. Essential trace metals: micronutrients with large impact. JOURNAL OF EXPERIMENTAL BOTANY 2022; 73:1685-1687. [PMID: 35288752 DOI: 10.1093/jxb/erac025] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
Affiliation(s)
- Zsuzsanna Kolbert
- Department of Plant Biology, University of Szeged, Szeged H6726, Hungary
| | - Ann Cuypers
- Centre for Environmental Sciences, Hasselt University, 3590 Diepenbeek, Belgium
| | - Nathalie Verbruggen
- Laboratory of Plant Physiology and Molecular Genetics, Université Libre de Bruxelles, 1050 Brussels, Belgium
| |
Collapse
|
5
|
Lešková A, Javot H, Giehl RFH. Metal crossroads in plants: modulation of nutrient acquisition and root development by essential trace metals. JOURNAL OF EXPERIMENTAL BOTANY 2022; 73:1751-1765. [PMID: 34791130 DOI: 10.1093/jxb/erab483] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/28/2021] [Accepted: 11/01/2021] [Indexed: 06/13/2023]
Abstract
The metals iron, zinc, manganese, copper, molybdenum, and nickel are essential for the growth and development of virtually all plant species. Although these elements are required at relatively low amounts, natural factors and anthropogenic activities can significantly affect their availability in soils, inducing deficiencies or toxicities in plants. Because essential trace metals can shape root systems and interfere with the uptake and signaling mechanisms of other nutrients, the non-optimal availability of any of them can induce multi-element changes in plants. Interference by one essential trace metal with the acquisition of another metal or a non-metal nutrient can occur prior to or during root uptake. Essential trace metals can also indirectly impact the plant's ability to capture soil nutrients by targeting distinct root developmental programs and hormone-related processes, consequently inducing largely metal-specific changes in root systems. The presence of metal binding domains in many regulatory proteins also enables essential trace metals to coordinate nutrient uptake by acting at high levels in hierarchical signaling cascades. Here, we summarize the known molecular and cellular mechanisms underlying trace metal-dependent modulation of nutrient acquisition and root development, and highlight the importance of considering multi-element interactions to breed crops better adapted to non-optimal trace metal availabilities.
Collapse
Affiliation(s)
- Alexandra Lešková
- Aix Marseille Univ, CEA, CNRS, Bioscience and Biotechnology Institut of Aix-Marseille (BIAM), SAVE, Saint Paul-Lez-Durance, F-13108, France
| | - Hélène Javot
- Aix Marseille Univ, CEA, CNRS, Bioscience and Biotechnology Institut of Aix-Marseille (BIAM), SAVE, Saint Paul-Lez-Durance, F-13108, France
| | - Ricardo F H Giehl
- Department of Physiology & Cell Biology, Leibniz-Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, 06466 Seeland, Germany
| |
Collapse
|
6
|
Thiébaut N, Hanikenne M. Zinc deficiency responses: bridging the gap between Arabidopsis and dicotyledonous crops. JOURNAL OF EXPERIMENTAL BOTANY 2022; 73:1699-1716. [PMID: 34791143 DOI: 10.1093/jxb/erab491] [Citation(s) in RCA: 11] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/05/2021] [Accepted: 11/05/2021] [Indexed: 06/13/2023]
Abstract
Zinc (Zn) deficiency is a widespread phenomenon in agricultural soils worldwide and has a major impact on crop yield and quality, and hence on human nutrition and health. Although dicotyledonous crops represent >30% of human plant-based nutrition, relatively few efforts have been dedicated to the investigation of Zn deficiency response mechanisms in dicotyledonous, in contrast to monocotyledonous crops, such as rice or barley. Here, we describe the Zn requirement and impact of Zn deficiency in several economically important dicotyledonous crops, Phaseolus vulgaris, Glycine max, Brassica oleracea, and Solanum lycopersicum. We briefly review our current knowledge of the Zn deficiency response in Arabidopsis and outline how this knowledge is translated in dicotyledonous crops. We highlight commonalities and differences between dicotyledonous species (and with monocotyledonous species) regarding the function and regulation of Zn transporters and chelators, as well as the Zn-sensing mechanisms and the role of hormones in the Zn deficiency response. Moreover, we show how the Zn homeostatic network intimately interacts with other nutrients, such as iron or phosphate. Finally, we outline how variation in Zn deficiency tolerance and Zn use efficiency among cultivars of dicotyledonous species can be leveraged for the design of Zn biofortification strategies.
Collapse
Affiliation(s)
- Noémie Thiébaut
- InBioS - PhytoSystems, Translational Plant Biology, University of Liège, 4000 Liège, Belgium
| | - Marc Hanikenne
- InBioS - PhytoSystems, Translational Plant Biology, University of Liège, 4000 Liège, Belgium
| |
Collapse
|
7
|
Assunção AGL, Cakmak I, Clemens S, González-Guerrero M, Nawrocki A, Thomine S. Micronutrient homeostasis in plants for more sustainable agriculture and healthier human nutrition. JOURNAL OF EXPERIMENTAL BOTANY 2022; 73:1789-1799. [PMID: 35134869 PMCID: PMC8921004 DOI: 10.1093/jxb/erac014] [Citation(s) in RCA: 17] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/30/2021] [Accepted: 01/28/2022] [Indexed: 05/03/2023]
Abstract
The provision of sustainable, sufficient, and nutritious food to the growing population is a major challenge for agriculture and the plant research community. In this respect, the mineral micronutrient content of food crops deserves particular attention. Micronutrient deficiencies in cultivated soils and plants are a global problem that adversely affects crop production and plant nutritional value, as well as human health and well-being. In this review, we call for awareness of the importance and relevance of micronutrients in crop production and quality. We stress the need for better micronutrient nutrition in human populations, not only in developing but also in developed nations, and describe strategies to identify and characterize new varieties with high micronutrient content. Furthermore, we explain how adequate nutrition of plants with micronutrients impacts metabolic functions and the capacity of plants to express tolerance mechanisms against abiotic and biotic constraints. Finally, we provide a brief overview and a critical discussion on current knowledge, future challenges, and specific technological needs for research on plant micronutrient homeostasis. Research in this area is expected to foster the sustainable development of nutritious and healthy food crops for human consumption.
Collapse
Affiliation(s)
- Ana G L Assunção
- Department of Plant and Environmental Sciences, University of Copenhagen, 1871 Frederiksberg, Denmark
- CIBIO-InBIO, Research Centre in Biodiversity and Genetic Resources, University of Porto, 4485-661 Vairão, Portugal
| | - Ismail Cakmak
- Faculty of Engineering and Natural Sciences, Sabanci University, 34956 Istanbul, Turkey
| | - Stephan Clemens
- Department of Plant Physiology and Faculty of Life Sciences: Food, Nutrition and Health, University of Bayreuth, 95440 Bayreuth, Germany
| | - Manuel González-Guerrero
- Centro de Biotecnología y Genómica de Plantas (UPM-INIA), Universidad Politécnica de Madrid, 28223 Pozuelo de Alarcón (Madrid), Spain
| | | | | |
Collapse
|
8
|
D’Oria A, Jing L, Arkoun M, Pluchon S, Pateyron S, Trouverie J, Etienne P, Diquélou S, Ourry A. Transcriptomic, Metabolomic and Ionomic Analyses Reveal Early Modulation of Leaf Mineral Content in Brassica napus under Mild or Severe Drought. Int J Mol Sci 2022; 23:781. [PMID: 35054964 PMCID: PMC8776245 DOI: 10.3390/ijms23020781] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2021] [Revised: 01/06/2022] [Accepted: 01/07/2022] [Indexed: 12/13/2022] Open
Abstract
While it is generally acknowledged that drought is one of the main abiotic factors affecting plant growth, how mineral nutrition is specifically and negatively affected by water deficit has received very little attention, other than being analyzed as a consequence of reduced growth. Therefore, Brassica napus plants were subjected to a gradual onset of water deficits (mild, severe, or severe extended), and leaves were analyzed at the ionomic, transcriptomic and metabolic levels. The number of Differentially Expressed Genes (DEGs) and of the most differentially accumulated metabolites increased from mild (525 DEGs, 57 metabolites) to severe (5454 DEGs, 78 metabolites) and severe extended (9346 DEGs, 95 metabolites) water deficit. Gene ontology enrichment analysis of the 11,747 DEGs identified revealed that ion transport was one of the most significant processes affected, even under mild water deficit, and this was also confirmed by the shift in ionomic composition (mostly micronutrients with a strong decrease in Mo, Fe, Zn, and Mn in leaves) that occurred well before growth reduction. The metabolomic data and most of the transcriptomic data suggested that well-known early leaf responses to drought such as phytohormone metabolism (ABA and JA), proline accumulation, and oxidative stress defense were induced later than repression of genes related to nutrient transport.
Collapse
Affiliation(s)
- Aurélien D’Oria
- Unicaen, INRAE, UMR 950 Eva, SFR Normandie Végétal (FED4277), Normandie Université, 14000 Caen, France; (A.D.); (J.T.); (P.E.); (S.D.)
- Laboratoire de Nutrition Végétale, Agro Innovation International-TIMAC AGRO, 35400 Saint-Malo, France; (M.A.); (S.P.)
| | - Lun Jing
- Plateformes Analytiques de Recherche, Agro Innovation International-TIMAC AGRO, 35400 Saint-Malo, France;
| | - Mustapha Arkoun
- Laboratoire de Nutrition Végétale, Agro Innovation International-TIMAC AGRO, 35400 Saint-Malo, France; (M.A.); (S.P.)
| | - Sylvain Pluchon
- Laboratoire de Nutrition Végétale, Agro Innovation International-TIMAC AGRO, 35400 Saint-Malo, France; (M.A.); (S.P.)
| | - Stéphanie Pateyron
- Institute of Plant Sciences Paris-Saclay (IPS2), Université Paris-Saclay, CNRS, INRAE, Univ Evry, 91405 Orsay, France;
- Institute of Plant Sciences Paris-Saclay (IPS2), Université de Paris, CNRS, INRAE, 91405 Orsay, France
| | - Jacques Trouverie
- Unicaen, INRAE, UMR 950 Eva, SFR Normandie Végétal (FED4277), Normandie Université, 14000 Caen, France; (A.D.); (J.T.); (P.E.); (S.D.)
| | - Philippe Etienne
- Unicaen, INRAE, UMR 950 Eva, SFR Normandie Végétal (FED4277), Normandie Université, 14000 Caen, France; (A.D.); (J.T.); (P.E.); (S.D.)
| | - Sylvain Diquélou
- Unicaen, INRAE, UMR 950 Eva, SFR Normandie Végétal (FED4277), Normandie Université, 14000 Caen, France; (A.D.); (J.T.); (P.E.); (S.D.)
| | - Alain Ourry
- Unicaen, INRAE, UMR 950 Eva, SFR Normandie Végétal (FED4277), Normandie Université, 14000 Caen, France; (A.D.); (J.T.); (P.E.); (S.D.)
| |
Collapse
|
9
|
Tibbett M, Green I, Rate A, De Oliveira VH, Whitaker J. The transfer of trace metals in the soil-plant-arthropod system. THE SCIENCE OF THE TOTAL ENVIRONMENT 2021; 779:146260. [PMID: 33744587 DOI: 10.1016/j.scitotenv.2021.146260] [Citation(s) in RCA: 15] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/27/2020] [Revised: 02/26/2021] [Accepted: 02/28/2021] [Indexed: 06/12/2023]
Abstract
Essential and non-essential trace metals are capable of causing toxicity to organisms above a threshold concentration. Extensive research has assessed the behaviour of trace metals in biological and ecological systems, but has typically focused on single organisms within a trophic level and not on multi-trophic transfer through terrestrial food chains. This reinforces the notion of metal toxicity as a closed system, failing to consider one trophic level as a pollution source to another; therefore, obscuring the full extent of ecosystem effects. Given the relatively few studies on trophic transfer of metals, this review has taken a compartment-based approach, where transfer of metals through trophic pathways is considered as a series of linked compartments (soil-plant-arthropod herbivore-arthropod predator). In particular, we consider the mechanisms by which trace metals are taken up by organisms, the forms and transformations that can occur within the organism and the consequences for trace metal availability to the next trophic level. The review focuses on four of the most prevalent metal cations in soil which are labile in terrestrial food chains: Cd, Cu, Zn and Ni. Current knowledge of the processes and mechanisms by which these metals are transformed and moved within and between trophic levels in the soil-plant-arthropod system are evaluated. We demonstrate that the key factors controlling the transfer of trace metals through the soil-plant-arthropod system are the form and location in which the metal occurs in the lower trophic level and the physiological mechanisms of each organism in regulating uptake, transformation, detoxification and transfer. The magnitude of transfer varies considerably depending on the trace metal concerned, as does its toxicity, and we conclude that biomagnification is not a general property of plant-arthropod and arthropod-arthropod systems. To deliver a more holistic assessment of ecosystem toxicity, integrated studies across ecosystem compartments are needed to identify critical pathways that can result in secondary toxicity across terrestrial food-chains.
Collapse
Affiliation(s)
- Mark Tibbett
- Department of Sustainable Land Management & Soil Research Centre, School of Agriculture Policy and Development, University of Reading, Whiteknights, RG6 6AR, UK.
| | - Iain Green
- Department of Life and Environmental Sciences, Faculty of Science and Technology, Bournemouth University, Poole, Dorset BH12 5BB, UK
| | - Andrew Rate
- School of Agriculture and Environment, The University of Western Australia, Perth, WA 6009, Australia
| | - Vinícius H De Oliveira
- Department of Plant Biology, Institute of Biology, University of Campinas, Campinas, Sao Paulo 13083-970, Brazil
| | - Jeanette Whitaker
- UK Centre for Ecology & Hydrology, Lancaster Environment Centre, Library Avenue, Lancaster LA1 4AP, UK
| |
Collapse
|
10
|
Ali S, Tyagi A, Bae H. Ionomic Approaches for Discovery of Novel Stress-Resilient Genes in Plants. Int J Mol Sci 2021; 22:7182. [PMID: 34281232 PMCID: PMC8267685 DOI: 10.3390/ijms22137182] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/27/2021] [Revised: 06/25/2021] [Accepted: 06/29/2021] [Indexed: 01/03/2023] Open
Abstract
Plants, being sessile, face an array of biotic and abiotic stresses in their lifespan that endanger their survival. Hence, optimized uptake of mineral nutrients creates potential new routes for enhancing plant health and stress resilience. Recently, minerals (both essential and non-essential) have been identified as key players in plant stress biology, owing to their multifaceted functions. However, a realistic understanding of the relationship between different ions and stresses is lacking. In this context, ionomics will provide new platforms for not only understanding the function of the plant ionome during stresses but also identifying the genes and regulatory pathways related to mineral accumulation, transportation, and involvement in different molecular mechanisms under normal or stress conditions. This article provides a general overview of ionomics and the integration of high-throughput ionomic approaches with other "omics" tools. Integrated omics analysis is highly suitable for identification of the genes for various traits that confer biotic and abiotic stress tolerance. Moreover, ionomics advances being used to identify loci using qualitative trait loci and genome-wide association analysis of element uptake and transport within plant tissues, as well as genetic variation within species, are discussed. Furthermore, recent developments in ionomics for the discovery of stress-tolerant genes in plants have also been addressed; these can be used to produce more robust crops with a high nutritional value for sustainable agriculture.
Collapse
Affiliation(s)
- Sajad Ali
- Department of Biotechnology, Yeungnam University, Gyeongsan 38541, Korea;
| | - Anshika Tyagi
- National Institute for Plant Biotechnology, New Delhi 110012, India;
| | - Hanhong Bae
- Department of Biotechnology, Yeungnam University, Gyeongsan 38541, Korea;
| |
Collapse
|
11
|
Zlobin IE. Current understanding of plant zinc homeostasis regulation mechanisms. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2021; 162:327-335. [PMID: 33714765 DOI: 10.1016/j.plaphy.2021.03.003] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/29/2020] [Accepted: 03/02/2021] [Indexed: 05/27/2023]
Abstract
The essential nature of Zn and widespread Zn deficiency in plants under field conditions underlie the great interest of researchers in the regulation of plant Zn homeostasis. Here, the current knowledge of plant Zn homeostasis regulation, mainly in A. thaliana, is reviewed. The plant Zn homeostasis machinery is regulated largely at the transcriptional level. Local regulation in response to changes in cellular Zn status is based on the transcription factors bZIP19 and bZIP23, which sense changes in free Zn2+ concentrations in the cell. However, there are likely other unidentified ways to sense cellular free Zn2+ concentrations in addition to the well-known bZIP19 and bZIP23 factors. In recent years, the existence of a shoot-derived systemic Zn deficiency signal, which is involved in the upregulation of Zn transport from roots to shoots, was demonstrated. Additionally, rates of mRNA degradation of Zn homeostasis genes are likely regulated by changes in cellular Zn status. In addition to the regulation of Zn transport, other mechanisms for the regulation of plant Zn homeostasis exist. "Zn sparing" mechanisms could be involved in the decrease in plant Zn requirements under Zn deficiency. Additionally, autophagy is probably regulated by local Zn status and involved in Zn reutilization at the cellular level. Current issues related to studying Zn homeostasis regulation are discussed.
Collapse
Affiliation(s)
- Ilya E Zlobin
- K.A. Timiryazev Institute of Plant Physiology RAS, 35 Botanicheskaya St., Moscow, 127276, Russia.
| |
Collapse
|
12
|
Hanikenne M, Esteves SM, Fanara S, Rouached H. Coordinated homeostasis of essential mineral nutrients: a focus on iron. JOURNAL OF EXPERIMENTAL BOTANY 2021; 72:2136-2153. [PMID: 33175167 DOI: 10.1093/jxb/eraa483] [Citation(s) in RCA: 37] [Impact Index Per Article: 12.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/15/2020] [Accepted: 10/13/2020] [Indexed: 05/22/2023]
Abstract
In plants, iron (Fe) transport and homeostasis are highly regulated processes. Fe deficiency or excess dramatically limits plant and algal productivity. Interestingly, complex and unexpected interconnections between Fe and various macro- and micronutrient homeostatic networks, supposedly maintaining general ionic equilibrium and balanced nutrition, are currently being uncovered. Although these interactions have profound consequences for our understanding of Fe homeostasis and its regulation, their molecular bases and biological significance remain poorly understood. Here, we review recent knowledge gained on how Fe interacts with micronutrient (e.g. zinc, manganese) and macronutrient (e.g. sulfur, phosphate) homeostasis, and on how these interactions affect Fe uptake and trafficking. Finally, we highlight the importance of developing an improved model of how Fe signaling pathways are integrated into functional networks to control plant growth and development in response to fluctuating environments.
Collapse
Affiliation(s)
- Marc Hanikenne
- InBioS - PhytoSystems, Functional Genomics and Plant Molecular Imaging, University of Liège, 4000 Liège, Belgium
| | - Sara M Esteves
- InBioS - PhytoSystems, Functional Genomics and Plant Molecular Imaging, University of Liège, 4000 Liège, Belgium
| | - Steven Fanara
- InBioS - PhytoSystems, Functional Genomics and Plant Molecular Imaging, University of Liège, 4000 Liège, Belgium
| | - Hatem Rouached
- BPMP, Univ. Montpellier, CNRS, INRA, Montpellier SupAgro, Montpellier, France
- Department of Plant, Soil, and Microbial Sciences, Michigan State University, East Lansing, MI, USA
- Plant Resilience Institute, Michigan State University, East Lansing, MI, USA
| |
Collapse
|
13
|
Wang Y, Yang J, Miao R, Kang Y, Qi Z. A novel zinc transporter essential for Arabidopsis zinc and iron-dependent growth. JOURNAL OF PLANT PHYSIOLOGY 2021; 256:153296. [PMID: 33161180 DOI: 10.1016/j.jplph.2020.153296] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/23/2020] [Revised: 10/03/2020] [Accepted: 10/04/2020] [Indexed: 06/11/2023]
Abstract
Zinc (Zn), an essential micronutrient, is absorbed by plant roots and redistributed to leaves. This process must be finely regulated in order to avoid toxic Zn2+ overaccumulation, which can arise due to Zn2+ oversupply or Zn2+ hyperaccumulation induced by Fe2+ deficiency. Although several proteins in Arabidopsis thaliana are essential for retaining Zn in the root and partitioning it from roots to leaves, how Zn2+ homeostasis in leaves is maintained is largely unknown. In this study, we identified a novel Golgi-localized protein named ZINC NUTRIENT ESSENTIAL1 (AtZNE1,At3g08650) in Arabidopsis. AtZNE1 contains 14 putative transmembrane domains. AtZNE1 promoter has strong activity in the root and leaf. Its expression complemented the increased sensitivity of a yeast mutant to excess Zn2+. The disruption of AtZNE1 in the T-DNA insertion mutant atzne1 caused growth defect under excess-Zn or Fe deficit conditions, but had no effects on the total Zn and Fe contents. We propose that AtZNE1 plays a vital role in plant adaptation to excess Zn or Fe deficiency.
Collapse
Affiliation(s)
- Yaohui Wang
- Key Laboratory of Forage and Endemic Crop Biotechnology, Ministry of Education, School of Life Sciences, Inner Mongolia University, Hohhot, 010010, PR China; State Key Laboratory of Reproductive Regulatory and Breeding of Grassland Livestock, Inner Mongolia University, Hohhot, 010010, PR China
| | - Ju Yang
- Key Laboratory of Forage and Endemic Crop Biotechnology, Ministry of Education, School of Life Sciences, Inner Mongolia University, Hohhot, 010010, PR China; State Key Laboratory of Reproductive Regulatory and Breeding of Grassland Livestock, Inner Mongolia University, Hohhot, 010010, PR China
| | - Ruiying Miao
- Key Laboratory of Forage and Endemic Crop Biotechnology, Ministry of Education, School of Life Sciences, Inner Mongolia University, Hohhot, 010010, PR China; State Key Laboratory of Reproductive Regulatory and Breeding of Grassland Livestock, Inner Mongolia University, Hohhot, 010010, PR China
| | - Yan Kang
- Key Laboratory of Forage and Endemic Crop Biotechnology, Ministry of Education, School of Life Sciences, Inner Mongolia University, Hohhot, 010010, PR China; State Key Laboratory of Reproductive Regulatory and Breeding of Grassland Livestock, Inner Mongolia University, Hohhot, 010010, PR China.
| | - Zhi Qi
- Key Laboratory of Forage and Endemic Crop Biotechnology, Ministry of Education, School of Life Sciences, Inner Mongolia University, Hohhot, 010010, PR China; State Key Laboratory of Reproductive Regulatory and Breeding of Grassland Livestock, Inner Mongolia University, Hohhot, 010010, PR China.
| |
Collapse
|
14
|
Stich B, Benke A, Schmidt M, Urbany C, Shi R, von Wirén N. The maize shoot ionome: Its interaction partners, predictive power, and genetic determinants. PLANT, CELL & ENVIRONMENT 2020; 43:2095-2111. [PMID: 32529648 DOI: 10.1111/pce.13823] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/04/2019] [Revised: 04/05/2020] [Accepted: 04/18/2020] [Indexed: 05/28/2023]
Abstract
An improved understanding of how to manipulate the accumulation and enrichment of mineral elements in aboveground plant tissues holds promise for future resource efficient and sustainable crop production. The objectives of this study were to (a) evaluate the influence of Fe regimes on mineral element concentrations and contents in the maize shoot as well as their correlations, (b) examine the predictive ability of physiological and morphological traits of individual genotypes of the IBM population from the concentration of mineral elements, and (c) identify genetic factors influencing the mineral element composition within and across Fe regimes. We evaluated the concentration and content of 12 mineral elements in shoots of the IBM population grown in sufficient and deficient Fe regimes and found for almost all mineral elements a significant (α = 0.05) genotypic variance. Across all mineral elements, the variance of genotype*Fe regime interactions was on average even more pronounced. High prediction abilities indicated that mineral elements are powerful predictors of morphological and physiological traits. Furthermore, our results suggest that ZmHMA2/3 and ZmMOT1 are major players in the natural genetic variation of Cd and Mo concentrations and contents of maize shoots, respectively.
Collapse
Affiliation(s)
- Benjamin Stich
- Institute for Quantitative Genetics and Genomics of Plants, Heinrich Heine University, Düsseldorf, Germany
- Cluster of Excellence on Plant Sciences, Düsseldorf, Germany
- Max Planck Institute for Plant Breeding Research, Köln, Germany
| | - Andreas Benke
- Max Planck Institute for Plant Breeding Research, Köln, Germany
| | - Maria Schmidt
- Institute for Quantitative Genetics and Genomics of Plants, Heinrich Heine University, Düsseldorf, Germany
| | - Claude Urbany
- Max Planck Institute for Plant Breeding Research, Köln, Germany
| | - Rongli Shi
- Leibniz Institute of Plant Genetics and Crop Plant Research, Gatersleben, Germany
| | - Nicolaus von Wirén
- Leibniz Institute of Plant Genetics and Crop Plant Research, Gatersleben, Germany
| |
Collapse
|
15
|
Yuan J, Sun N, Du H, Yin S, Kang H, Umair M, Liu C. Roles of metabolic regulation in developing Quercus variabilis acorns at contrasting geologically-derived phosphorus sites in subtropical China. BMC PLANT BIOLOGY 2020; 20:389. [PMID: 32842952 PMCID: PMC7449008 DOI: 10.1186/s12870-020-02605-y] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/12/2020] [Accepted: 08/16/2020] [Indexed: 06/01/2023]
Abstract
BACKGROUND Phosphorus (P) -rich soils develop in phosphorite residing areas while P-deficient soils are ubiquitous in subtropical regions. Little has been reported that how metabolites participate in the seed development and the processes involved in their coping with contrasting-nutrient environments. RESULTS Here we quantified the metabolites of Quercus variabilis acorns in the early (July), middle (August), late (September) development stages, and determined element (C, H, O, N, P, K, Ca, Mg, S, Fe, Al, Mn, Na, Zn, and Cu) concentrations of acorns in the late stage, at geologically-derived contrasting-P sites in subtropical China. The primary metabolic pathways included sugar metabolism, the TCA cycle, and amino acid metabolism. Most metabolites (especially C- and N-containing metabolites) increased and then decreased from July to September. Acorns between the two sites were significantly discriminated at the three stages, respectively, by metabolites (predominantly sugars and organic acids). Concentrations of P, orthophosphoric acid and most sugars were higher; erythrose was lower in late-stage acorns at P-rich sites than those at P-deficient sites. No significant differences existed in the size and dry mass of individual acorns between oak populations at the two sites. CONCLUSIONS Oak acorns at the two sites formed distinct metabolic phenotypes related to their distinct geologically-derived soil conditions, and the late-stage acorns tended to increase P-use-efficiency in the material synthesis process at P-deficient sites, relative to those at P-rich sites.
Collapse
Affiliation(s)
- Jun Yuan
- School of Agriculture and Biology, Shanghai Jiao Tong University, Dongchuan Rd. 800, Shanghai, 200240, China
| | - Ningxiao Sun
- School of Agriculture and Biology, Shanghai Jiao Tong University, Dongchuan Rd. 800, Shanghai, 200240, China
| | - Hongmei Du
- School of Design, Shanghai Jiao Tong University, 800 Dongchuan RD, Shanghai, China
| | - Shan Yin
- School of Agriculture and Biology, Shanghai Jiao Tong University, Dongchuan Rd. 800, Shanghai, 200240, China
- Shanghai Urban Forest Ecosystem Research Station, National Forestry and Grassland Administration, 800 Dongchuan RD, Shanghai, China
- Shanghai Yangtze River Delta Eco-environmental Change and Management Observation and Research Station, Ministry of Education, P. R. China, 800 Dongchuan RD, Shanghai, China
- Key Laboratory of Urban Agriculture, Ministry of Agriculture, 800 Dongchuan RD., Shanghai, China
| | - Hongzhang Kang
- School of Agriculture and Biology, Shanghai Jiao Tong University, Dongchuan Rd. 800, Shanghai, 200240, China
- Shanghai Urban Forest Ecosystem Research Station, National Forestry and Grassland Administration, 800 Dongchuan RD, Shanghai, China
- Shanghai Yangtze River Delta Eco-environmental Change and Management Observation and Research Station, Ministry of Education, P. R. China, 800 Dongchuan RD, Shanghai, China
- Key Laboratory of Urban Agriculture, Ministry of Agriculture, 800 Dongchuan RD., Shanghai, China
| | - Muhammad Umair
- School of Agriculture and Biology, Shanghai Jiao Tong University, Dongchuan Rd. 800, Shanghai, 200240, China
| | - Chunjiang Liu
- School of Agriculture and Biology, Shanghai Jiao Tong University, Dongchuan Rd. 800, Shanghai, 200240, China.
- Shanghai Urban Forest Ecosystem Research Station, National Forestry and Grassland Administration, 800 Dongchuan RD, Shanghai, China.
- Shanghai Yangtze River Delta Eco-environmental Change and Management Observation and Research Station, Ministry of Education, P. R. China, 800 Dongchuan RD, Shanghai, China.
- Key Laboratory of Urban Agriculture, Ministry of Agriculture, 800 Dongchuan RD., Shanghai, China.
| |
Collapse
|
16
|
Xing S, Tao C, Song Z, Liu W, Yan J, Kang L, Lin C, Sang T. Coexpression network revealing the plasticity and robustness of population transcriptome during the initial stage of domesticating energy crop Miscanthus lutarioriparius. PLANT MOLECULAR BIOLOGY 2018; 97:489-506. [PMID: 30006693 DOI: 10.1007/s11103-018-0754-5] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/06/2018] [Accepted: 06/26/2018] [Indexed: 06/08/2023]
Abstract
Coexpression network revealing genes with Co-variation Expression pattern (CE) and those with Top rank of Expression fold change (TE) played different roles in responding to new environment of Miscanthus lutarioriparius. Variation in gene expression level, the product of genetic and/or environmental perturbation, determines the robustness-to-plasticity spectrum of a phenotype in plants. Understanding how expression variation of plant population response to a new field is crucial to domesticate energy crops. Weighted Gene Coexpression Network Analysis (WGCNA) was used to explore the patterns of expression variation based on 72 Miscanthus lutarioriparius transcriptomes from two contrasting environments, one near the native habitat and the other in one harsh domesticating region. The 932 genes with Co-variation Expression pattern (CE) and other 932 genes with Top rank of Expression fold change (TE) were identified and the former were strongly associated with the water use efficiency (r ≥ 0.55, P ≤ 10-7). Functional enrichment of CE genes were related to three organelles, which well matched the annotation of twelve motifs identified from their conserved noncoding sequence; while TE genes were mostly related to biotic and/or abiotic stress. The expression robustness of CE genes with high genetic diversity kept relatively stable between environments while the harsh environment reduced the expression robustness of TE genes with low genetic diversity. The expression plasticity of CE genes was increased less than that of TE genes. These results suggested that expression variation of CE genes and TE genes could account for the robustness and plasticity of acclimation ability of Miscanthus, respectively. The patterns of expression variation revealed by transcriptomic network would shed new light on breeding and domestication of energy crops.
Collapse
Affiliation(s)
- Shilai Xing
- State Key Laboratory of Systematic and Evolutionary Botany, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China
- University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Chengcheng Tao
- Key Laboratory of Plant Resources and Beijing Botanical Garden, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China
- University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Zhihong Song
- Key Laboratory of Plant Resources and Beijing Botanical Garden, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China
- University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Wei Liu
- Key Laboratory of Plant Resources and Beijing Botanical Garden, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China
| | - Juan Yan
- Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan, 430074, Hubei, China
| | - Lifang Kang
- Key Laboratory of Plant Resources and Beijing Botanical Garden, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China
| | - Cong Lin
- Key Laboratory of Plant Resources and Beijing Botanical Garden, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China
| | - Tao Sang
- State Key Laboratory of Systematic and Evolutionary Botany, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China.
- Key Laboratory of Plant Resources and Beijing Botanical Garden, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China.
| |
Collapse
|
17
|
Neugebauer K, Broadley MR, El-Serehy HA, George TS, McNicol JW, Moraes MF, White PJ. Variation in the angiosperm ionome. PHYSIOLOGIA PLANTARUM 2018; 163:306-322. [PMID: 29412469 DOI: 10.1111/ppl.12700] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/10/2017] [Revised: 01/15/2018] [Accepted: 01/31/2018] [Indexed: 05/06/2023]
Abstract
The ionome is defined as the elemental composition of a subcellular structure, cell, tissue, organ or organism. The subset of the ionome comprising mineral nutrients is termed the functional ionome. A 'standard functional ionome' of leaves of an 'average' angiosperm, defined as the nutrient composition of leaves when growth is not limited by mineral nutrients, is presented and can be used to compare the effects of environment and genetics on plant nutrition. The leaf ionome of a plant is influenced by interactions between its environment and genetics. Examples of the effects of the environment on the leaf ionome are presented and the consequences of nutrient deficiencies on the leaf ionome are described. The physiological reasons for (1) allometric relationships between leaf nitrogen and phosphorus concentrations and (2) linear relationships between leaf calcium and magnesium concentrations are explained. It is noted that strong phylogenetic effects on the mineral composition of leaves of angiosperm species are observed even when sampled from diverse environments. The evolutionary origins of traits including (1) the small calcium concentrations of Poales leaves, (2) the large magnesium concentrations of Caryophyllales leaves and (3) the large sulphur concentrations of Brassicales leaves are traced using phylogenetic relationships among angiosperm orders, families and genera. The rare evolution of hyperaccumulation of toxic elements in leaves of angiosperms is also described. Consequences of variation in the leaf ionome for ecology, mineral cycling in the environment, strategies for phytoremediation of contaminated land, sustainable agriculture and the nutrition of livestock and humans are discussed.
Collapse
Affiliation(s)
- Konrad Neugebauer
- Ecological Science Group, The James Hutton Institute, Dundee, DD2 5DA, UK
- Plant and Crop Sciences Division, University of Nottingham, Loughborough, LE12 5RD, UK
| | - Martin R Broadley
- Plant and Crop Sciences Division, University of Nottingham, Loughborough, LE12 5RD, UK
| | - Hamed A El-Serehy
- Zoology Department, College of Science, King Saud University, Riyadh, 11451, Saudi Arabia
| | - Timothy S George
- Ecological Science Group, The James Hutton Institute, Dundee, DD2 5DA, UK
| | | | - Milton F Moraes
- Graduate Program of Tropical Agriculture, Federal University of Mato Grosso, Barra do Garças, Mato Grosso, Brazil
| | - Philip J White
- Ecological Science Group, The James Hutton Institute, Dundee, DD2 5DA, UK
- Distinguished Scientist Fellowship Program, King Saud University, Riyadh, 11451, Saudi Arabia
| |
Collapse
|
18
|
Lilay GH, Castro PH, Campilho A, Assunção AGL. The Arabidopsis bZIP19 and bZIP23 Activity Requires Zinc Deficiency - Insight on Regulation From Complementation Lines. FRONTIERS IN PLANT SCIENCE 2018; 9:1955. [PMID: 30723487 PMCID: PMC6349776 DOI: 10.3389/fpls.2018.01955] [Citation(s) in RCA: 39] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/17/2018] [Accepted: 12/17/2018] [Indexed: 05/06/2023]
Abstract
All living organisms require zinc as an essential micronutrient. Maintaining appropriate intracellular zinc supply, and avoiding deficiency or toxic excess, requires a tight regulation of zinc homeostasis. In Arabidopsis, bZIP19 and bZIP23 (basic-leucine zipper) transcription factors are the central regulators of the zinc deficiency response. Their targets include members of the ZIP (Zrt/Irt-like Protein) transporter family, involved in cellular zinc uptake, which are up-regulated at zinc deficiency. However, the mechanisms by which these transcription factors are regulated by cellular zinc status are not yet known. Here, to further our insight, we took advantage of the zinc deficiency hypersensitive phenotype of the bzip19 bzip23 double mutant, and used it as background to produce complementation lines of each Arabidopsis F-bZIP transcription factor, including bZIP24. On these lines, we performed complementation and localization studies, analyzed the transcript level of a subset of putative target genes, and performed elemental tissue profiling. We find evidence supporting that the zinc-dependent activity of bZIP19 and bZIP23 is modulated by zinc at protein level, in the nucleus, where cellular zinc sufficiency represses their activity and zinc deficiency is required. In addition, we show that these two transcription factors are functionally redundant to a large extent, and that differential tissue-specific expression patterns might, at least partly, explain distinct regulatory activities. Finally, we show that bZIP24 does not play a central role in the Zn deficiency response. Overall, we provide novel information that advances our understanding of the regulatory activity of bZIP19 and bZIP23.
Collapse
Affiliation(s)
- Grmay H. Lilay
- Department of Plant and Environmental Sciences, Copenhagen Plant Science Centre, University of Copenhagen, Frederiksberg, Denmark
| | - Pedro Humberto Castro
- Department of Plant and Environmental Sciences, Copenhagen Plant Science Centre, University of Copenhagen, Frederiksberg, Denmark
| | - Ana Campilho
- CIBIO/InBIO – Research Centre in Biodiversity and Genetic Resources, University of Porto, Vairão, Portugal
- Department of Biology, University of Porto, Porto, Portugal
| | - Ana G. L. Assunção
- Department of Plant and Environmental Sciences, Copenhagen Plant Science Centre, University of Copenhagen, Frederiksberg, Denmark
- CIBIO/InBIO – Research Centre in Biodiversity and Genetic Resources, University of Porto, Vairão, Portugal
- *Correspondence: Ana G. L. Assunção,
| |
Collapse
|