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Holz M, Mundschenk E, Pusch V, Remus R, Dubbert M, Oburger E, Staudinger C, Wissuwa M, Zarebanadkouki M. Visualizing and quantifying 33P uptake and translocation by maize plants grown in soil. FRONTIERS IN PLANT SCIENCE 2024; 15:1376613. [PMID: 38947946 PMCID: PMC11211545 DOI: 10.3389/fpls.2024.1376613] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/25/2024] [Accepted: 05/20/2024] [Indexed: 07/02/2024]
Abstract
Phosphorus (P) availability severely limits plant growth due to its immobility and inaccessibility in soils. Yet, visualization and measurements of P uptake from different root types or regions in soil are methodologically challenging. Here, we explored the potential of phosphor imaging combined with local injection of radioactive 33P to quantitatively visualize P uptake and translocation along roots of maize grown in soils. Rhizoboxes (20 × 40 × 1 cm) were filled with sandy field soil or quartz sand, with one maize plant per box. Soil compartments were created using a gravel layer to restrict P transfer. After 2 weeks, a compartment with the tip region of a seminal root was labeled with a NaH2 33PO4 solution containing 12 MBq of 33P. Phosphor imaging captured root P distribution at 45 min, 90 min, 135 min, 180 min, and 24 h post-labeling. After harvest, 33P levels in roots and shoots were quantified. 33P uptake exhibited a 50% increase in quartz sand compared to sandy soil, likely attributed to higher P adsorption to the sandy soil matrix than to quartz sand. Notably, only 60% of the absorbed 33P was translocated to the shoot, with the remaining 40% directed to growing root tips of lateral or seminal roots. Phosphor imaging unveiled a continuous rise in 33P signal in the labeled seminal root from immediate post-labeling until 24 h after labeling. The highest 33P activities were concentrated just above the labeled compartment, diminishing in locations farther away. Emerging laterals from the labeled root served as strong sinks for 33P, while a portion was also transported to other seminal roots. Our study quantitatively visualized 33P uptake and translocation dynamics, facilitating future investigations into diverse root regions/types and varying plant growth conditions. This improves our understanding of the significance of different P sources for plant nutrition and potentially enhances models of plant P uptake.
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Affiliation(s)
- Maire Holz
- Research Area Landscape Functioning, Leibniz Centre for Agricultural Landscape Research (ZALF), Müncheberg, Germany
| | - Eva Mundschenk
- Research Area Landscape Functioning, Leibniz Centre for Agricultural Landscape Research (ZALF), Müncheberg, Germany
| | - Valerie Pusch
- Research Area Landscape Functioning, Leibniz Centre for Agricultural Landscape Research (ZALF), Müncheberg, Germany
| | - Rainer Remus
- Research Area Landscape Functioning, Leibniz Centre for Agricultural Landscape Research (ZALF), Müncheberg, Germany
| | - Maren Dubbert
- Research Area Landscape Functioning, Leibniz Centre for Agricultural Landscape Research (ZALF), Müncheberg, Germany
| | - Eva Oburger
- Department of Forest and Soil Sciences, Institute of Soil Research, University of Natural Resources and Life Sciences (BOKU), Vienna, Austria
| | - Christiana Staudinger
- Department of Forest and Soil Sciences, Institute of Soil Research, University of Natural Resources and Life Sciences (BOKU), Vienna, Austria
| | - Matthias Wissuwa
- PhenoRob Cluster of Excellence and Institute of Crop Science and Resource Conservation (INRES), University of Bonn, Bonn, Germany
| | - Mohsen Zarebanadkouki
- Professorship for Soil Biophysics and Environmental Systems, TUM School of Life Sciences, Technical University of Munich (TUM), Munich, Germany
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Voothuluru P, Wu Y, Sharp RE. Not so hidden anymore: Advances and challenges in understanding root growth under water deficits. THE PLANT CELL 2024; 36:1377-1409. [PMID: 38382086 PMCID: PMC11062450 DOI: 10.1093/plcell/koae055] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/14/2023] [Revised: 02/09/2024] [Accepted: 02/15/2024] [Indexed: 02/23/2024]
Abstract
Limited water availability is a major environmental factor constraining plant development and crop yields. One of the prominent adaptations of plants to water deficits is the maintenance of root growth that enables sustained access to soil water. Despite early recognition of the adaptive significance of root growth maintenance under water deficits, progress in understanding has been hampered by the inherent complexity of root systems and their interactions with the soil environment. We highlight selected milestones in the understanding of root growth responses to water deficits, with emphasis on founding studies that have shaped current knowledge and set the stage for further investigation. We revisit the concept of integrated biophysical and metabolic regulation of plant growth and use this framework to review central growth-regulatory processes occurring within root growth zones under water stress at subcellular to organ scales. Key topics include the primary processes of modifications of cell wall-yielding properties and osmotic adjustment, as well as regulatory roles of abscisic acid and its interactions with other hormones. We include consideration of long-recognized responses for which detailed mechanistic understanding has been elusive until recently, for example hydrotropism, and identify gaps in knowledge, ongoing challenges, and opportunities for future research.
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Affiliation(s)
- Priya Voothuluru
- Division of Plant Science and Technology, University of Missouri, Columbia, MO 65211, USA
- Interdisciplinary Plant Group, University of Missouri, Columbia, MO 65211, USA
| | - Yajun Wu
- Department of Biology and Microbiology, South Dakota State University, Brookings, SD 57007, USA
| | - Robert E Sharp
- Division of Plant Science and Technology, University of Missouri, Columbia, MO 65211, USA
- Interdisciplinary Plant Group, University of Missouri, Columbia, MO 65211, USA
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Baca Cabrera JC, Vanderborght J, Couvreur V, Behrend D, Gaiser T, Nguyen TH, Lobet G. Root hydraulic properties: An exploration of their variability across scales. PLANT DIRECT 2024; 8:e582. [PMID: 38590783 PMCID: PMC10999368 DOI: 10.1002/pld3.582] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/07/2023] [Revised: 02/26/2024] [Accepted: 03/05/2024] [Indexed: 04/10/2024]
Abstract
Root hydraulic properties are key physiological traits that determine the capacity of root systems to take up water, at a specific evaporative demand. They can strongly vary among species, cultivars or even within the same genotype, but a systematic analysis of their variation across plant functional types (PFTs) is still missing. Here, we reviewed published empirical studies on root hydraulic properties at the segment-, individual root-, or root system scale and determined its variability and the main factors contributing to it. This corresponded to a total of 241 published studies, comprising 213 species, including woody and herbaceous vegetation. We observed an extremely large range of variation (of orders of magnitude) in root hydraulic properties, but this was not caused by systematic differences among PFTs. Rather, the (combined) effect of factors such as root system age, driving force used for measurement, or stress treatments shaped the results. We found a significant decrease in root hydraulic properties under stress conditions (drought and aquaporin inhibition, p < .001) and a significant effect of the driving force used for measurement (hydrostatic or osmotic gradients, p < .001). Furthermore, whole root system conductance increased significantly with root system age across several crop species (p < .01), causing very large variation in the data (>2 orders of magnitude). Interestingly, this relationship showed an asymptotic shape, with a steep increase during the first days of growth and a flattening out at later stages of development. We confirmed this dynamic through simulations using a state-of-the-art computational model of water flow in the root system for a variety of crop species, suggesting common patterns across studies and species. These findings provide better understanding of the main causes of root hydraulic properties variations observed across empirical studies. They also open the door to better representation of hydraulic processes across multiple plant functional types and at large scales. All data collected in our analysis has been aggregated into an open access database (https://roothydraulic-properties.shinyapps.io/database/), fostering scientific exchange.
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Affiliation(s)
- Juan C. Baca Cabrera
- Institute of Bio‐ and Geoscience, Agrosphere (IBG‐3)Forschungszentrum Jülich GmbHJülichGermany
| | - Jan Vanderborght
- Institute of Bio‐ and Geoscience, Agrosphere (IBG‐3)Forschungszentrum Jülich GmbHJülichGermany
| | - Valentin Couvreur
- Earth and Life InstituteUniversité catholique de LouvainLouvain‐la‐NeuveBelgium
| | - Dominik Behrend
- Institute of Crop Science and Resources ConservationUniversity of BonnBonnGermany
| | - Thomas Gaiser
- Institute of Crop Science and Resources ConservationUniversity of BonnBonnGermany
| | - Thuy Huu Nguyen
- Institute of Crop Science and Resources ConservationUniversity of BonnBonnGermany
| | - Guillaume Lobet
- Institute of Bio‐ and Geoscience, Agrosphere (IBG‐3)Forschungszentrum Jülich GmbHJülichGermany
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Protto V, Bauget F, Rishmawi L, Nacry P, Maurel C. Primary, seminal and lateral roots of maize show type-specific growth and hydraulic responses to water deficit. PLANT PHYSIOLOGY 2024; 194:2564-2579. [PMID: 38217868 PMCID: PMC10980523 DOI: 10.1093/plphys/kiad675] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/23/2023] [Revised: 11/07/2023] [Accepted: 11/27/2023] [Indexed: 01/15/2024]
Abstract
The water uptake capacity of a root system is determined by its architecture and hydraulic properties, which together shape the root hydraulic architecture. Here, we investigated root responses to water deficit (WD) in seedlings of a maize (Zea mays) hybrid line (B73H) grown in hydroponic conditions, taking into account the primary root (PR), the seminal roots (SR), and their respective lateral roots. WD was induced by various polyethylene glycol concentrations and resulted in dose-dependent inhibitions of axial and lateral root growth, lateral root formation, and hydraulic conductivity (Lpr), with slightly distinct sensitivities to WD between PR and SR. Inhibition of Lpr by WD showed a half-time of 5 to 6 min and was fully (SR) or partially (PR) reversible within 40 min. In the two root types, WD resulted in reduced aquaporin expression and activity, as monitored by mRNA abundance of 13 plasma membrane intrinsic protein (ZmPIP) isoforms and inhibition of Lpr by sodium azide, respectively. An enhanced suberization/lignification of the epi- and exodermis was observed under WD in axial roots and in lateral roots of the PR but not in those of SR. Inverse modeling revealed a steep increase in axial conductance in root tips of PR and SR grown under WD that may be due to the decreased growth rate of axial roots in these conditions. Overall, our work reveals that these root types show quantitative differences in their anatomical, architectural, and hydraulic responses to WD, in terms of sensitivity, amplitude and reversibility. This distinct functionalization may contribute to integrative acclimation responses of whole root systems to soil WD.
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Affiliation(s)
- Virginia Protto
- Institute for Plant Sciences of Montpellier (IPSiM), Univ Montpellier, CNRS, INRAE, Institut Agro, 2 place Viala, 34060 Montpellier, France
| | - Fabrice Bauget
- Institute for Plant Sciences of Montpellier (IPSiM), Univ Montpellier, CNRS, INRAE, Institut Agro, 2 place Viala, 34060 Montpellier, France
| | - Louai Rishmawi
- Institute for Plant Sciences of Montpellier (IPSiM), Univ Montpellier, CNRS, INRAE, Institut Agro, 2 place Viala, 34060 Montpellier, France
| | - Philippe Nacry
- Institute for Plant Sciences of Montpellier (IPSiM), Univ Montpellier, CNRS, INRAE, Institut Agro, 2 place Viala, 34060 Montpellier, France
| | - Christophe Maurel
- Institute for Plant Sciences of Montpellier (IPSiM), Univ Montpellier, CNRS, INRAE, Institut Agro, 2 place Viala, 34060 Montpellier, France
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Blystone S, Nuixe M, Traoré AS, Cochard H, Picon-Cochard C, Pagés G. Towards portable MRI in the plant sciences. PLANT METHODS 2024; 20:31. [PMID: 38369530 PMCID: PMC10874549 DOI: 10.1186/s13007-024-01152-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/10/2023] [Accepted: 02/05/2024] [Indexed: 02/20/2024]
Abstract
Plant physiology and structure are constantly changing according to internal and external factors. The study of plant water dynamics can give information on these changes, as they are linked to numerous plant functions. Currently, most of the methods used to study plant water dynamics are either invasive, destructive, or not easily accessible. Portable magnetic resonance imaging (MRI) is a field undergoing rapid expansion and which presents substantial advantages in the plant sciences. MRI permits the non-invasive study of plant water content, flow, structure, stress response, and other physiological processes, as a multitude of information can be obtained using the method, and portable devices make it possible to take these measurements in situ, in a plant's natural environment. In this work, we review the use of such devices applied to plants in climate chambers, greenhouses or in their natural environments. We also compare the use of portable MRI to other methods to obtain the same information and outline its advantages and disadvantages.
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Affiliation(s)
- Shannan Blystone
- Université Clermont Auvergne, INRAE, UR QuaPA, 63122, Saint-Genès-Champanelle, France
- INRAE, PROBE research infrastructure, AgroResonance facility, 63122, Saint-Genès-Champanelle, France
- Université Clermont Auvergne, INRAE, PIAF, 63000, Clermont-Ferrand, France
| | - Magali Nuixe
- Université Clermont Auvergne, INRAE, UR QuaPA, 63122, Saint-Genès-Champanelle, France
- INRAE, PROBE research infrastructure, AgroResonance facility, 63122, Saint-Genès-Champanelle, France
- Université Clermont Auvergne, INRAE, VetAgro Sup, UREP, 63000, Clermont-Ferrand, France
| | - Amidou Sissou Traoré
- Université Clermont Auvergne, INRAE, UR QuaPA, 63122, Saint-Genès-Champanelle, France
- INRAE, PROBE research infrastructure, AgroResonance facility, 63122, Saint-Genès-Champanelle, France
| | - Hervé Cochard
- Université Clermont Auvergne, INRAE, PIAF, 63000, Clermont-Ferrand, France
| | | | - Guilhem Pagés
- Université Clermont Auvergne, INRAE, UR QuaPA, 63122, Saint-Genès-Champanelle, France.
- INRAE, PROBE research infrastructure, AgroResonance facility, 63122, Saint-Genès-Champanelle, France.
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Affortit P, Ahmed MA, Grondin A, Delzon S, Carminati A, Laplaze L. Keep in touch: the soil-root hydraulic continuum and its role in drought resistance in crops. JOURNAL OF EXPERIMENTAL BOTANY 2024; 75:584-593. [PMID: 37549338 DOI: 10.1093/jxb/erad312] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/04/2023] [Accepted: 08/04/2023] [Indexed: 08/09/2023]
Abstract
Drought is a major threat to food security worldwide. Recently, the root-soil interface has emerged as a major site of hydraulic resistance during water stress. Here, we review the impact of soil drying on whole-plant hydraulics and discuss mechanisms by which plants can adapt by modifying the properties of the rhizosphere either directly or through interactions with the soil microbiome.
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Affiliation(s)
- Pablo Affortit
- DIADE, IRD, CIRAD, Université de Montpellier, Montpellier, France
| | - Mutez Ali Ahmed
- Root-Soil Interaction, School of Life Science, Technical University of Munich, Freising, Germany
| | | | | | - Andrea Carminati
- Department of Environmental Systems Science, ETH Zürich, Zürich, Switzerland
| | - Laurent Laplaze
- DIADE, IRD, CIRAD, Université de Montpellier, Montpellier, France
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7
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Hostetler AN, Morais de Sousa Tinoco S, Sparks EE. Root responses to abiotic stress: a comparative look at root system architecture in maize and sorghum. JOURNAL OF EXPERIMENTAL BOTANY 2024; 75:553-562. [PMID: 37798135 DOI: 10.1093/jxb/erad390] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/31/2023] [Accepted: 10/04/2023] [Indexed: 10/07/2023]
Abstract
Under all environments, roots are important for plant anchorage and acquiring water and nutrients. However, there is a knowledge gap regarding how root architecture contributes to stress tolerance in a changing climate. Two closely related plant species, maize and sorghum, have distinct root system architectures and different levels of stress tolerance, making comparative analysis between these two species an ideal approach to resolve this knowledge gap. However, current research has focused on shared aspects of the root system that are advantageous under abiotic stress conditions rather than on differences. Here we summarize the current state of knowledge comparing the root system architecture relative to plant performance under water deficit, salt stress, and low phosphorus in maize and sorghum. Under water deficit, steeper root angles and deeper root systems are proposed to be advantageous for both species. In saline soils, a reduction in root length and root number has been described as advantageous, but this work is limited. Under low phosphorus, root systems that are shallow and wider are beneficial for topsoil foraging. Future work investigating the differences between these species will be critical for understanding the role of root system architecture in optimizing plant production for a changing global climate.
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Affiliation(s)
- Ashley N Hostetler
- Department of Plant and Soil Sciences and the Delaware Biotechnology Institute, University of Delaware, Newark, DE 19711, USA
| | | | - Erin E Sparks
- Department of Plant and Soil Sciences and the Delaware Biotechnology Institute, University of Delaware, Newark, DE 19711, USA
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8
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Abdalla M, Bitterlich M, Jansa J, Püschel D, Ahmed MA. The role of arbuscular mycorrhizal symbiosis in improving plant water status under drought. JOURNAL OF EXPERIMENTAL BOTANY 2023; 74:4808-4824. [PMID: 37409696 DOI: 10.1093/jxb/erad249] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/21/2022] [Accepted: 06/28/2023] [Indexed: 07/07/2023]
Abstract
Arbuscular mycorrhizal fungi (AMF) have been presumed to ameliorate crop tolerance to drought. Here, we review the role of AMF in maintaining water supply to plants from drying soils and the underlying biophysical mechanisms. We used a soil-plant hydraulic model to illustrate the impact of several AMF mechanisms on plant responses to edaphic drought. The AMF enhance the soil's capability to transport water and extend the effective root length, thereby attenuating the drop in matric potential at the root surface during soil drying. The synthesized evidence and the corresponding simulations demonstrate that symbiosis with AMF postpones the stress onset limit, which is defined as the disproportionality between transpiration rates and leaf water potentials, during soil drying. The symbiosis can thus help crops survive extended intervals of limited water availability. We also provide our perspective on future research needs and call for reconciling the dynamic changes in soil and root hydraulics in order to better understand the role of AMF in plant water relations in the face of climate changes.
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Affiliation(s)
- Mohanned Abdalla
- Chair of Root-Soil Interaction, School of Life Sciences, Technical University of Munich, Freising, Germany
- Chair of Soil Physics, Bayreuth Center of Ecology and Environmental Research (BayCEER), University of Bayreuth, Bayreuth, Germany
- Department of Horticulture, Faculty of Agriculture, University of Khartoum, Khartoum North, Sudan
| | - Michael Bitterlich
- Humboldt-Universität zu Berlin, Thaer-Institute, Division Urban Plant Ecophysiology, Berlin, Germany
| | - Jan Jansa
- Laboratory of Fungal Biology, Institute of Microbiology, Czech Academy of Sciences, Prague, Czech Republic
| | - David Püschel
- Department of Mycorrhizal Symbioses, Institute of Botany of the Czech Academy of Sciences, Průhonice, Czech Republic
| | - Mutez A Ahmed
- Chair of Root-Soil Interaction, School of Life Sciences, Technical University of Munich, Freising, Germany
- Chair of Soil Physics, Bayreuth Center of Ecology and Environmental Research (BayCEER), University of Bayreuth, Bayreuth, Germany
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9
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Koehler T, Wankmüller FJP, Sadok W, Carminati A. Transpiration response to soil drying versus increasing vapor pressure deficit in crops: physical and physiological mechanisms and key plant traits. JOURNAL OF EXPERIMENTAL BOTANY 2023; 74:4789-4807. [PMID: 37354081 PMCID: PMC10474596 DOI: 10.1093/jxb/erad221] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/09/2023] [Accepted: 06/07/2023] [Indexed: 06/26/2023]
Abstract
The water deficit experienced by crops is a function of atmospheric water demand (vapor pressure deficit) and soil water supply over the whole crop cycle. We summarize typical transpiration response patterns to soil and atmospheric drying and the sensitivity to plant hydraulic traits. We explain the transpiration response patterns using a soil-plant hydraulic framework. In both cases of drying, stomatal closure is triggered by limitations in soil-plant hydraulic conductance. However, traits impacting the transpiration response differ between the two drying processes and act at different time scales. A low plant hydraulic conductance triggers an earlier restriction in transpiration during increasing vapor pressure deficit. During soil drying, the impact of the plant hydraulic conductance is less obvious. It is rather a decrease in the belowground hydraulic conductance (related to soil hydraulic properties and root length density) that is involved in transpiration down-regulation. The transpiration response to increasing vapor pressure deficit has a daily time scale. In the case of soil drying, it acts on a seasonal scale. Varieties that are conservative in water use on a daily scale may not be conservative over longer time scales (e.g. during soil drying). This potential independence of strategies needs to be considered in environment-specific breeding for yield-based drought tolerance.
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Affiliation(s)
- Tina Koehler
- Physics of Soils and Terrestrial Ecosystems, Department of Environmental Systems Science, ETH Zurich, Zurich, Switzerland
- Soil Physics, Bayreuth Center of Ecology and Environmental Research (BayCEER), University of Bayreuth, Bayreuth, Germany
| | - Fabian J P Wankmüller
- Physics of Soils and Terrestrial Ecosystems, Department of Environmental Systems Science, ETH Zurich, Zurich, Switzerland
| | - Walid Sadok
- Agronomy and Plant Genetics, College of Food, Agricultural and Natural Resource Sciences, University of Minnesota, Twin Cities, MN, USA
| | - Andrea Carminati
- Physics of Soils and Terrestrial Ecosystems, Department of Environmental Systems Science, ETH Zurich, Zurich, Switzerland
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Siddiqui N, Gabi MT, Kamruzzaman M, Ambaw AM, Teferi TJ, Dadshani S, Léon J, Ballvora A. Genetic dissection of root architectural plasticity and identification of candidate loci in response to drought stress in bread wheat. BMC Genom Data 2023; 24:38. [PMID: 37495985 PMCID: PMC10373353 DOI: 10.1186/s12863-023-01140-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2022] [Accepted: 07/14/2023] [Indexed: 07/28/2023] Open
Abstract
BACKGROUND The frequency of droughts has dramatically increased over the last 50 years, causing yield declines in cereals, including wheat. Crop varieties with efficient root systems show great potential for plant adaptation to drought stress, however; genetic control of root systems in wheat under field conditions is not yet well understood. RESULTS Natural variation in root architecture plasticity (phenotypic alteration due to changing environments) was dissected under field-based control (well-irrigated) and drought (rain-out shelter) conditions by a genome-wide association study using 200 diverse wheat cultivars. Our results revealed root architecture and plasticity traits were differentially responded to drought stress. A total of 25 marker-trait associations (MTAs) underlying natural variations in root architectural plasticity were identified in response to drought stress. They were abundantly distributed on chromosomes 1 A, 1B, 2 A, 2B, 3 A, 3B, 4B, 5 A, 5D, 7 A and 7B of the wheat genome. Gene ontology annotation showed that many candidate genes associated with plasticity were involved in water-transport and water channel activity, cellular response to water deprivation, scavenging reactive oxygen species, root growth and development and hormone-activated signaling pathway-transmembrane transport, indicating their response to drought stress. Further, in silico transcript abundance analysis demonstrated that root plasticity-associated candidate genes were highly expressed in roots across different root growth stages and under drought treatments. CONCLUSION Our results suggest that root phenotypic plasticity is highly quantitative, and the corresponding loci are associated with drought stress that may provide novel ways to enable root trait breeding.
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Affiliation(s)
- Nurealam Siddiqui
- Institute of Crop Science and Resource Conservation (INRES)-Plant Breeding, University of Bonn, 53115, Bonn, Germany
- Department of Biochemistry and Molecular Biology, Bangabandhu Sheikh Mujibur Rahman Agricultural University, Gazipur, 1706, Bangladesh
| | - Melesech T Gabi
- Institute of Crop Science and Resource Conservation (INRES)-Plant Breeding, University of Bonn, 53115, Bonn, Germany
| | - Mohammad Kamruzzaman
- Institute of Crop Science and Resource Conservation (INRES)-Plant Breeding, University of Bonn, 53115, Bonn, Germany
- Plant Breeding Division, Bangladesh Institute of Nuclear Agriculture (BINA), Mymensingh-2202, Bangladesh
| | - Abebaw M Ambaw
- Institute of Crop Science and Resource Conservation (INRES)-Plant Breeding, University of Bonn, 53115, Bonn, Germany
| | - Tesfaye J Teferi
- Institute of Crop Science and Resource Conservation (INRES)-Plant Breeding, University of Bonn, 53115, Bonn, Germany
| | - Said Dadshani
- INRES-Plant Nutrition, University of Bonn, 53115, Bonn, Germany
| | - Jens Léon
- Institute of Crop Science and Resource Conservation (INRES)-Plant Breeding, University of Bonn, 53115, Bonn, Germany
- Field Lab Campus Klein-Altendorf, University of Bonn, Klein-Altendorf 2, 53359, Rheinbach, Germany
| | - Agim Ballvora
- Institute of Crop Science and Resource Conservation (INRES)-Plant Breeding, University of Bonn, 53115, Bonn, Germany.
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11
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Rishmawi L, Bauget F, Protto V, Bauland C, Nacry P, Maurel C. Natural variation of maize root hydraulic architecture underlies highly diverse water uptake capacities. PLANT PHYSIOLOGY 2023; 192:2404-2418. [PMID: 37052178 PMCID: PMC10315320 DOI: 10.1093/plphys/kiad213] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/23/2022] [Revised: 02/21/2023] [Accepted: 03/16/2023] [Indexed: 06/19/2023]
Abstract
Plant water uptake is determined by the root system architecture and its hydraulic capacity, which together define the root hydraulic architecture. The current research aims at understanding the water uptake capacities of maize (Zea mays), a model organism and major crop. We explored the genetic variations within a collection of 224 maize inbred Dent lines and successively defined core genotype subsets to access multiple architectural, anatomical, and hydraulic parameters in the primary root (PR) and seminal roots (SR) of hydroponically grown seedlings. We found 9-, 3.5-, and 12.4-fold genotypic differences for root hydraulics (Lpr), PR size, and lateral root size, respectively, that shaped wide and independent variations of root structure and function. Within genotypes, PR and SR showed similarities in hydraulics and, to a lesser extent, in anatomy. They had comparable aquaporin activity profiles that, however, could not be explained by aquaporin expression levels. Genotypic variations in the size and number of late meta xylem vessels were positively correlated with Lpr. Inverse modeling further revealed dramatic genotypic differences in the xylem conductance profile. Thus, tremendous natural variation of maize root hydraulic architecture underlies a high diversity of water uptake strategies and paves the way to quantitative genetic dissection of its elementary traits.
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Affiliation(s)
- Louai Rishmawi
- IPSiM, Univ Montpellier, CNRS, INRAE, Institut Agro, 34060 Montpellier, France
| | - Fabrice Bauget
- IPSiM, Univ Montpellier, CNRS, INRAE, Institut Agro, 34060 Montpellier, France
| | - Virginia Protto
- IPSiM, Univ Montpellier, CNRS, INRAE, Institut Agro, 34060 Montpellier, France
| | - Cyril Bauland
- Université Paris-Saclay, INRAE, CNRS, AgroParisTech, GQE—Le Moulon, Gif-sur-Yvette, France
| | - Philippe Nacry
- IPSiM, Univ Montpellier, CNRS, INRAE, Institut Agro, 34060 Montpellier, France
| | - Christophe Maurel
- IPSiM, Univ Montpellier, CNRS, INRAE, Institut Agro, 34060 Montpellier, France
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Müllers Y, Postma JA, Poorter H, van Dusschoten D. Deep-water uptake under drought improved due to locally increased root conductivity in maize, but not in faba bean. PLANT, CELL & ENVIRONMENT 2023; 46:2046-2060. [PMID: 36942406 DOI: 10.1111/pce.14587] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/22/2022] [Revised: 03/16/2023] [Accepted: 03/19/2023] [Indexed: 06/08/2023]
Abstract
Moderate soil drying can cause a strong decrease in the soil-root system conductance. The resulting impact on root water uptake depends on the spatial distribution of the altered conductance relatively to remaining soil water resources, which is largely unknown. Here, we analyzed the vertical distribution of conductance across root systems using a novel, noninvasive sensor technology on pot-grown faba bean and maize plants. Withholding water for 4 days strongly enhanced the vertical gradient in soil water potential. Therefore, roots in upper and deeper soil layers were affected differently: In drier, upper layers, root conductance decreased by 66%-72%, causing an amplification of the drop in leaf water potential. In wetter, deeper layers, root conductance increased in maize but not in faba bean. The consequently facilitated deep-water uptake in maize contributed up to 21% of total water uptake at the end of the measurement. Analysis of root length distributions with MRI indicated that the locally increased conductance was mainly caused by an increased intrinsic conductivity and not by additional root growth. Our findings show that plants can partly compensate for a reduced root conductance in upper, drier soil layers by locally increasing root conductivity in wetter layers, thereby improving deep-water uptake.
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Affiliation(s)
- Yannik Müllers
- IBG-2, Plant Sciences, Forschungszentrum Jülich, Jülich, Germany
| | | | - Hendrik Poorter
- IBG-2, Plant Sciences, Forschungszentrum Jülich, Jülich, Germany
- Department of Natural Sciences, Macquarie University, Sydney, Australia
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13
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Lu Y, Fricke W. Salt Stress-Regulation of Root Water Uptake in a Whole-Plant and Diurnal Context. Int J Mol Sci 2023; 24:ijms24098070. [PMID: 37175779 PMCID: PMC10179082 DOI: 10.3390/ijms24098070] [Citation(s) in RCA: 8] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/11/2023] [Revised: 04/25/2023] [Accepted: 04/27/2023] [Indexed: 05/15/2023] Open
Abstract
This review focuses on the regulation of root water uptake in plants which are exposed to salt stress. Root water uptake is not considered in isolation but is viewed in the context of other potential tolerance mechanisms of plants-tolerance mechanisms which relate to water relations and gas exchange. Plants spend between one third and half of their lives in the dark, and salt stress does not stop with sunset, nor does it start with sunrise. Surprisingly, how plants deal with salt stress during the dark has received hardly any attention, yet any growth response to salt stress over days, weeks, months and years is the integrative result of how plants perform during numerous, consecutive day/night cycles. As we will show, dealing with salt stress during the night is a prerequisite to coping with salt stress during the day. We hope to highlight with this review not so much what we know, but what we do not know; and this relates often to some rather basic questions.
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Affiliation(s)
- Yingying Lu
- School of Biology and Environmental Science, University College Dublin (UCD), Belfield, D04 N2E5 Dublin, Ireland
| | - Wieland Fricke
- School of Biology and Environmental Science, University College Dublin (UCD), Belfield, D04 N2E5 Dublin, Ireland
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14
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Li X, Peng L, Cai Y, He F, Zhou Q, Shi D. Potential Threat of Lead Oxide Nanoparticles for Food Crops: Comprehensive Understanding of the Impacts of Different Nanosized PbO x ( x = 1, 2) on Maize ( Zea mays L.) Seedlings In Vivo. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2023; 71:4235-4248. [PMID: 36854048 DOI: 10.1021/acs.jafc.2c06843] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/18/2023]
Abstract
PbOx (PbO2 and PbO, x = 1, 2) nanoparticles are emerging contaminants in dust, soil, and water due to extensive application of commercial lead products. As far as we know, the current studies are first conducted to understand the phytotoxic effects of PbO2 (10 ± 3 nm) and PbO NPs (20 ± 5 nm) on maize (Zea mays L.) grown in hydroponic treatments. The exposure assays indicated that phytotoxic effects were dose- and size-dependent on PbOx NPs. Water uptake would be the crucial mechanism to govern the effects of PbOx on maize seed germination and root elongation, while the nanosize of particles and water transpiration processes would control maize growth and biomass production. PbOx NPs significantly influenced the macro- and micronutrients in roots and shoots of maize and significantly affected the maize growth and grain development. Our findings provide clear-cut evidence that PbO/PbO2 NPs can bioaccumulate in maize cell organelles via apoplastic and symplastic routes from the seed and root pathways along with water uptake and transportation. The significance of this research elucidates the impacts of PbO/PbO2 NPs on food security and indicates the threat of emerging PbO/PbO2 NPs to human dietary health.
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Affiliation(s)
- Xiaoping Li
- Department of Environmental Science, School of Geography and Tourism, Shaanxi Normal University, Xi'an, Shaanxi 710062, PR China
- International Joint Research Centre of Shaanxi Province for Pollutant Exposure and Eco-environmental Health, Xi'an, Shaanxi 710062, PR China
- Environmental Research Group, School of Public Health, Imperial College London, 80 Wood Lane, London W12 0BZ, U.K
| | - Liyuan Peng
- Department of Environmental Science, School of Geography and Tourism, Shaanxi Normal University, Xi'an, Shaanxi 710062, PR China
- International Joint Research Centre of Shaanxi Province for Pollutant Exposure and Eco-environmental Health, Xi'an, Shaanxi 710062, PR China
| | - Yue Cai
- Department of Environmental Science, School of Geography and Tourism, Shaanxi Normal University, Xi'an, Shaanxi 710062, PR China
- International Joint Research Centre of Shaanxi Province for Pollutant Exposure and Eco-environmental Health, Xi'an, Shaanxi 710062, PR China
| | - Feng He
- Department of Environmental Science, School of Geography and Tourism, Shaanxi Normal University, Xi'an, Shaanxi 710062, PR China
- International Joint Research Centre of Shaanxi Province for Pollutant Exposure and Eco-environmental Health, Xi'an, Shaanxi 710062, PR China
| | - Qishang Zhou
- Department of Environmental Science, School of Geography and Tourism, Shaanxi Normal University, Xi'an, Shaanxi 710062, PR China
- International Joint Research Centre of Shaanxi Province for Pollutant Exposure and Eco-environmental Health, Xi'an, Shaanxi 710062, PR China
| | - Danqian Shi
- Department of Environmental Science, School of Geography and Tourism, Shaanxi Normal University, Xi'an, Shaanxi 710062, PR China
- International Joint Research Centre of Shaanxi Province for Pollutant Exposure and Eco-environmental Health, Xi'an, Shaanxi 710062, PR China
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15
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Koehler T, Schaum C, Tung SY, Steiner F, Tyborski N, Wild AJ, Akale A, Pausch J, Lueders T, Wolfrum S, Mueller CW, Vidal A, Vahl WK, Groth J, Eder B, Ahmed MA, Carminati A. Above and belowground traits impacting transpiration decline during soil drying in 48 maize (Zea mays) genotypes. ANNALS OF BOTANY 2023; 131:373-386. [PMID: 36479887 PMCID: PMC9992933 DOI: 10.1093/aob/mcac147] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/11/2022] [Revised: 11/24/2022] [Accepted: 12/06/2022] [Indexed: 06/17/2023]
Abstract
BACKGROUND AND AIMS Stomatal regulation allows plants to promptly respond to water stress. However, our understanding of the impact of above and belowground hydraulic traits on stomatal regulation remains incomplete. The objective of this study was to investigate how key plant hydraulic traits impact transpiration of maize during soil drying. We hypothesize that the stomatal response to soil drying is related to a loss in soil hydraulic conductivity at the root-soil interface, which in turn depends on plant hydraulic traits. METHODS We investigate the response of 48 contrasting maize (Zea mays) genotypes to soil drying, utilizing a novel phenotyping facility. In this context, we measure the relationship between leaf water potential, soil water potential, soil water content and transpiration, as well as root, rhizosphere and aboveground plant traits. KEY RESULTS Genotypes differed in their responsiveness to soil drying. The critical soil water potential at which plants started decreasing transpiration was related to a combination of above and belowground traits: genotypes with a higher maximum transpiration and plant hydraulic conductance as well as a smaller root and rhizosphere system closed stomata at less negative soil water potentials. CONCLUSIONS Our results demonstrate the importance of belowground hydraulics for stomatal regulation and hence drought responsiveness during soil drying. Furthermore, this finding supports the hypothesis that stomata start to close when soil hydraulic conductivity drops at the root-soil interface.
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Affiliation(s)
| | - Carolin Schaum
- Soil Physics, Bayreuth Center of Ecology and Environmental Research (BayCEER), University of Bayreuth, Bayreuth, Germany
| | - Shu-Yin Tung
- Institute for Agroecology and Organic Farming, Bavarian State Research Center for Agriculture, Freising, Germany
| | | | - Nicolas Tyborski
- Ecological Microbiology, Bayreuth Center of Ecology and Environmental Research (BayCEER), University of Bayreuth, Bayreuth, Germany
| | - Andreas J Wild
- Agroecology, Bayreuth Center of Ecology and Environmental Research (BayCEER), University of Bayreuth, Bayreuth, Germany
| | - Asegidew Akale
- Soil Physics, Bayreuth Center of Ecology and Environmental Research (BayCEER), University of Bayreuth, Bayreuth, Germany
| | - Johanna Pausch
- Agroecology, Bayreuth Center of Ecology and Environmental Research (BayCEER), University of Bayreuth, Bayreuth, Germany
| | - Tillmann Lueders
- Ecological Microbiology, Bayreuth Center of Ecology and Environmental Research (BayCEER), University of Bayreuth, Bayreuth, Germany
| | - Sebastian Wolfrum
- Institute for Agroecology and Organic Farming, Bavarian State Research Center for Agriculture, Freising, Germany
| | - Carsten W Mueller
- Soil Science, Technical University of Munich, Freising, Germany
- Department of Geosciences and Natural Resource Management, University of Copenhagen, Copenhagen, Denmark
| | - Alix Vidal
- Soil Biology Group, Wageningen University & Research, Wageningen, The Netherlands
| | - Wouter K Vahl
- Institute for Crop Science and Plant Breeding, Bavarian State Research Center for Agriculture, Freising, Germany
| | - Jennifer Groth
- Institute for Crop Science and Plant Breeding, Bavarian State Research Center for Agriculture, Freising, Germany
| | - Barbara Eder
- Institute for Crop Science and Plant Breeding, Bavarian State Research Center for Agriculture, Freising, Germany
| | - Mutez A Ahmed
- Soil Physics, Bayreuth Center of Ecology and Environmental Research (BayCEER), University of Bayreuth, Bayreuth, Germany
- Department of Land, Air and Water Resources, University of California Davis, Davis, CA, USA
| | - Andrea Carminati
- Physics of Soils and Terrestrial Ecosystems, Department of Environmental Systems Science, ETH Zurich, Zurich, Switzerland
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16
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De novo transcriptome assembly from the nodal root growth zone of hydrated and water-deficit stressed maize inbred line FR697. Sci Rep 2023; 13:1960. [PMID: 36737660 PMCID: PMC9898524 DOI: 10.1038/s41598-023-29115-9] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/26/2022] [Accepted: 01/31/2023] [Indexed: 02/05/2023] Open
Abstract
Certain cultivars of maize show increased tolerance to water deficit conditions by maintenance of root growth. To better understand the molecular mechanisms related to this adaptation, nodal root growth zone samples were collected from the reference inbred line B73 and inbred line FR697, which exhibits a relatively greater ability to maintain root elongation under water deficits. Plants were grown under various water stress levels in both field and controlled environment settings. FR697-specific RNA-Seq datasets were generated and used for a de novo transcriptome assembly to characterize any genotype-specific genetic features. The assembly was aided by an Iso-Seq library of transcripts generated from various FR697 plant tissue samples. The Necklace pipeline was used to combine a Trinity de novo assembly along with a reference guided assembly and the Viridiplantae proteome to generate an annotated consensus "SuperTranscriptome" assembly of 47,915 transcripts with a N50 of 3152 bp in length. The results were compared by Blastn to maize reference genes, a Benchmarking Universal Single-Copy Orthologs (BUSCO) genome completeness report and compared with three maize reference genomes. The resultant 'SuperTranscriptome' was demonstrated to be of high-quality and will serve as an important reference for analysis of the maize nodal root transcriptomic response to environmental perturbations.
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17
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Lippold E, Schlüter S, Mueller CW, Höschen C, Harrington G, Kilian R, Gocke MI, Lehndorff E, Mikutta R, Vetterlein D. Correlative Imaging of the Rhizosphere─A Multimethod Workflow for Targeted Mapping of Chemical Gradients. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2023; 57:1538-1549. [PMID: 36626664 DOI: 10.1021/acs.est.2c07340] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/17/2023]
Abstract
Examining in situ processes in the soil rhizosphere requires spatial information on physical and chemical properties under undisturbed conditions. We developed a correlative imaging workflow for targeted sampling of roots in their three-dimensional (3D) context and assessed the imprint of roots on chemical properties of the root-soil contact zone at micrometer to millimeter scale. Maize (Zea mays) was grown in 15N-labeled soil columns and pulse-labeled with 13CO2 to visualize the spatial distribution of carbon inputs and nitrogen uptake together with the redistribution of other elements. Soil columns were scanned by X-ray computed tomography (X-ray CT) at low resolution (45 μm) to enable image-guided subsampling of specific root segments. Resin-embedded subsamples were then analyzed by X-ray CT at high resolution (10 μm) for their 3D structure and chemical gradients around roots using micro-X-ray fluorescence spectroscopy (μXRF), nanoscale secondary ion mass spectrometry (NanoSIMS), and laser-ablation isotope ratio mass spectrometry (LA-IRMS). Concentration gradients, particularly of calcium and sulfur, with different spatial extents could be identified by μXRF. NanoSIMS and LA-IRMS detected the release of 13C into soil up to a distance of 100 μm from the root surface, whereas 15N accumulated preferentially in the root cells. We conclude that combining targeted sampling of the soil-root system and correlative microscopy opens new avenues for unraveling rhizosphere processes in situ.
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Affiliation(s)
- Eva Lippold
- Department of Soil System Science, Helmholtz Centre for Environmental Research - UFZ, Theodor-Lieser-Straße 4, 06120 Halle (Saale), Germany
| | - Steffen Schlüter
- Department of Soil System Science, Helmholtz Centre for Environmental Research - UFZ, Theodor-Lieser-Straße 4, 06120 Halle (Saale), Germany
| | - Carsten W Mueller
- Department of Life Science Systems, Soil Science, TUM School of Life Sciences, Technical University of Munich, Emil-Ramann-Straße 2, 85354 Freising, Germany
- Department of Geosciences and Natural Resource Management, University of Copenhagen, Øster Voldgade 10, 1350 Copenhagen, Denmark
| | - Carmen Höschen
- Department of Life Science Systems, Soil Science, TUM School of Life Sciences, Technical University of Munich, Emil-Ramann-Straße 2, 85354 Freising, Germany
| | - Gertraud Harrington
- Department of Life Science Systems, Soil Science, TUM School of Life Sciences, Technical University of Munich, Emil-Ramann-Straße 2, 85354 Freising, Germany
| | - Rüdiger Kilian
- Mineralogy and Geochemistry, Martin Luther University Halle-Wittenberg, Von-Seckendorff-Platz 3, 06120 Halle (Saale), Germany
| | - Martina I Gocke
- Soil Science and Soil Ecology, Institute of Crop Science and Resource Conservation, University of Bonn, Nussallee 13, 53115 Bonn, Germany
| | - Eva Lehndorff
- Soil Ecology, Bayreuth University, Dr.-Hans-Frisch-Straße 1-3, 95448 Bayreuth, Germany
| | - Robert Mikutta
- Soil Science and Soil Protection, Martin Luther University Halle-Wittenberg, Von-Seckendorff-Platz 3, 06120 Halle (Saale), Germany
| | - Doris Vetterlein
- Department of Soil System Science, Helmholtz Centre for Environmental Research - UFZ, Theodor-Lieser-Straße 4, 06120 Halle (Saale), Germany
- Soil Science and Soil Protection, Martin Luther University Halle-Wittenberg, Von-Seckendorff-Platz 3, 06120 Halle (Saale), Germany
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18
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Si Z, Delhaize E, Hendriks PW, Li X. Differences in Root Morphologies of Contrasting Wheat ( Triticum aestivum) Genotypes Are Robust of a Drought Treatment. PLANTS (BASEL, SWITZERLAND) 2023; 12:275. [PMID: 36678988 PMCID: PMC9863919 DOI: 10.3390/plants12020275] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/26/2022] [Revised: 12/21/2022] [Accepted: 12/28/2022] [Indexed: 06/17/2023]
Abstract
We aimed to assess the effect of water deprivation on root traits and to establish if the wheat cultivars Spica and Maringa would be useful as parental germplasm for a genetic analysis of root traits. Plants were grown in two markedly different soils under well-watered and water-limited treatments in controlled environment growth cabinets. The drought treatment was imposed as a gradual depletion of water over 28 days as seedlings grew from a defined starting moisture content. The root traits analyzed included length, nodal root number, thickness and nodal root angle. The relative differences in traits between genotypes generally proved to be robust in terms of water treatment and soil type. Maringa had a shallower nodal root angle than Spica, which was driven by the nodal roots. By contrast, the seminal roots of Maringa were found to be similar to or even steeper than those of Spica. We conclude that the differences in root traits between Spica and Maringa were robust to the drought treatment and soil types. Phenotyping on well-watered soil is relevant for identifying traits potentially involved in conferring water use efficiency. Furthermore, Spica and Maringa are suitable parental germplasm for developing populations to determine the genetics of key root traits.
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Affiliation(s)
- Zhuanyun Si
- Key Laboratory of Crop Water Use and Regulation, Ministry of Agriculture and Rural Affairs/Institute of Farmland Irrigation, Chinese Academy of Agricultural Sciences, Xinxiang 453002, China
- CSIRO Agriculture and Food, Canberra, ACT 2601, Australia
| | - Emmanuel Delhaize
- Australian Plant Phenomics Facility, Research School of Biology, The Australian National University, Canberra, ACT 2600, Australia
| | - Pieter-Willem Hendriks
- CSIRO Agriculture and Food, Canberra, ACT 2601, Australia
- Faculty of Agriculture and Life Sciences, Lincoln University, 85084 Ellesmere Junction Road, Lincoln 7647, New Zealand
| | - Xiaoqing Li
- CSIRO Agriculture and Food, Canberra, ACT 2601, Australia
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19
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Ahmed B, Rizvi A, Syed A, Rajput VD, Elgorban AM, Al-Rejaie SS, Minkina T, Khan MS, Lee J. Understanding the phytotoxic impact of Al 3+, nano-size, and bulk Al 2O 3 on growth and physiology of maize (Zea mays L.) in aqueous and soil media. CHEMOSPHERE 2022; 300:134555. [PMID: 35405193 DOI: 10.1016/j.chemosphere.2022.134555] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/04/2021] [Revised: 03/10/2022] [Accepted: 04/05/2022] [Indexed: 06/14/2023]
Abstract
The release and accumulation of metal-oxide nanoparticles in soils have threatened terrestrial plants. However, limited knowledge is available on the accumulation of nano-Al2O3 (22 nm), bulk-Al2O3 (167 nm), and Al3+ by maize plants and the subsequent impact on its physiology and growth in agar (0.7% w/v), hydroponic (1X), and soil. Maize plants were cultivated with 0.05-2 mg g-1 or ml-1 of three Al types and their biological attributes, oxidative status, Al bioaccumulation, and translocation were measured. The ICP-MS results revealed a dose-dependent increase (P ≤ 0.05 or ≤0.01) in Al content in maize tissues following nano-Al2O3 and Al3+ exposure, however, plants exposed to bulk-Al2O3 showed no significant uptake of Al. Atomic mapping by EDX during SEM analysis and TEM revealed varied distributions of nano-Al2O3 from roots to aerial parts and intracellular transportation. Al deposition in tissues followed the order: Al3+ > nano-Al2O3 > bulk-Al2O3 and therefore, a similar trend of toxicity was observed for seed germination, the emergence of plant organs, length, biomass accumulation, total chlorophyll, phosphorus content, and total soluble protein. Oxidative stress was profoundly induced dose-dependently and was highest at 2 mg ml-1 or g-1 of Al3+ and nano-Al2O3 when superoxide radical formation, proline induction, activities of superoxide dismutase (SOD), catalase (CAT), peroxidase (GPX), and glutathione reductase (GR) and membrane lipid peroxidation were measured. Aluminum toxicity was found higher in hydroponically grown maize compared to soil-grown maize. Forty days exposure in soil showed greater inhibition of maize growth compared to 20 days exposure. This study is significant in understanding the maize response to different Al types in soil and soil-free media.
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Affiliation(s)
- Bilal Ahmed
- School of Chemical Engineering, Yeungnam University, Gyeongsan, Republic of Korea.
| | - Asfa Rizvi
- Department of Botany, Jamia Hamdard University, New Delhi, 110062, India
| | - Asad Syed
- Department of Botany and Microbiology, College of Science, King Saud University, P.O. Box 2455, Riyadh, 11451, Saudi Arabia
| | - Vishnu D Rajput
- Academy of Biology and Biotechnology, Southern Federal University, Rostov-on-Don, 344090, Russia.
| | - Abdallah M Elgorban
- Department of Botany and Microbiology, College of Science, King Saud University, P.O. Box 2455, Riyadh, 11451, Saudi Arabia
| | - Salim S Al-Rejaie
- Department of Pharmacology and Toxicology, College of Pharmacy, P.O. Box 55760, King Saud University, Riyadh, 11451, Saudi Arabia
| | - Tatiana Minkina
- Academy of Biology and Biotechnology, Southern Federal University, Rostov-on-Don, 344090, Russia
| | - Mohammad Saghir Khan
- Department of Agricultural Microbiology, Faculty of Agricultural Sciences, Aligarh Muslim University, Aligarh, India
| | - Jintae Lee
- School of Chemical Engineering, Yeungnam University, Gyeongsan, Republic of Korea.
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20
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Li A, Zhu L, Xu W, Liu L, Teng G. Recent advances in methods for in situ root phenotyping. PeerJ 2022; 10:e13638. [PMID: 35795176 PMCID: PMC9252182 DOI: 10.7717/peerj.13638] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2022] [Accepted: 06/06/2022] [Indexed: 01/17/2023] Open
Abstract
Roots assist plants in absorbing water and nutrients from soil. Thus, they are vital to the survival of nearly all land plants, considering that plants cannot move to seek optimal environmental conditions. Crop species with optimal root system are essential for future food security and key to improving agricultural productivity and sustainability. Root systems can be improved and bred to acquire soil resources efficiently and effectively. This can also reduce adverse environmental impacts by decreasing the need for fertilization and fresh water. Therefore, there is a need to improve and breed crop cultivars with favorable root system. However, the lack of high-throughput root phenotyping tools for characterizing root traits in situ is a barrier to breeding for root system improvement. In recent years, many breakthroughs in the measurement and analysis of roots in a root system have been made. Here, we describe the major advances in root image acquisition and analysis technologies and summarize the advantages and disadvantages of each method. Furthermore, we look forward to the future development direction and trend of root phenotyping methods. This review aims to aid researchers in choosing a more appropriate method for improving the root system.
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Affiliation(s)
- Anchang Li
- School of Information Science and Technology, Hebei Agricultrual University, Baoding, Hebei, China
| | - Lingxiao Zhu
- State Key Laboratory of North China Crop Improvement and Regulation, Hebei Agricultrual University, Baoding, Hebei, China
| | - Wenjun Xu
- School of Information Science and Technology, Hebei Agricultrual University, Baoding, Hebei, China
| | - Liantao Liu
- State Key Laboratory of North China Crop Improvement and Regulation, Hebei Agricultrual University, Baoding, Hebei, China
| | - Guifa Teng
- School of Information Science and Technology, Hebei Agricultrual University, Baoding, Hebei, China
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21
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Cai G, Tötzke C, Kaestner A, Ahmed MA. Quantification of root water uptake and redistribution using neutron imaging: a review and future directions. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2022; 111:348-359. [PMID: 35603461 DOI: 10.1111/tpj.15839] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/16/2021] [Revised: 05/12/2022] [Accepted: 05/19/2022] [Indexed: 06/15/2023]
Abstract
Quantifying root water uptake is essential to understanding plant water use and responses to different environmental conditions. However, non-destructive measurement of water transport and related hydraulics in the soil-root system remains a challenge. Neutron imaging, with its high sensitivity to hydrogen, has become an unparalleled tool to visualize and quantify root water uptake in vivo. In combination with isotopes (e.g., deuterated water) and a diffusion-convection model, root water uptake and hydraulic redistribution in root and soil can be quantified. Here, we review recent advances in utilizing neutron imaging to visualize and quantify root water uptake, hydraulic redistribution in roots and soil, and root hydraulic properties of different plant species. Under uniform soil moisture distributions, neutron radiographic studies have shown that water uptake was not uniform along the root and depended on both root type and age. For both tap (e.g., lupine [Lupinus albus L.]) and fibrous (e.g., maize [Zea mays L.]) root systems, water was mainly taken up through lateral roots. In mature maize, the location of water uptake shifted from seminal roots and their laterals to crown/nodal roots and their laterals. Under non-uniform soil moisture distributions, part of the water taken up during the daytime maintained the growth of crown/nodal roots in the upper, drier soil layers. Ultra-fast neutron tomography provides new insights into 3D water movement in soil and roots. We discuss the limitations of using neutron imaging and propose future directions to utilize neutron imaging to advance our understanding of root water uptake and soil-root interactions.
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Affiliation(s)
- Gaochao Cai
- Chair of Soil Physics, Bayreuth Center of Ecology and Environmental Research (BayCEER), University of Bayreuth, Universitätsstraße 30, 95447, Bayreuth, Germany
| | - Christian Tötzke
- Institute of Environmental Science and Geography, University of Potsdam, Karl-Liebknecht-Str. 24-25, 14476, Potsdam, Germany
| | - Anders Kaestner
- Laboratory for Neutron Scattering and Imaging, Paul Scherrer Institute, Forschungsstrasse 111, 5232, Villigen, Switzerland
| | - Mutez Ali Ahmed
- Chair of Soil Physics, Bayreuth Center of Ecology and Environmental Research (BayCEER), University of Bayreuth, Universitätsstraße 30, 95447, Bayreuth, Germany
- Department of Land, Air and Water Resources, University of California Davis, Davis, CA, 95616, USA
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22
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Cai G, Ahmed MA. The role of root hairs in water uptake: recent advances and future perspectives. JOURNAL OF EXPERIMENTAL BOTANY 2022; 73:3330-3338. [PMID: 35323893 DOI: 10.1093/jxb/erac114] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/19/2021] [Accepted: 03/14/2022] [Indexed: 06/14/2023]
Abstract
Sufficient water is essential for plant growth and production. Root hairs connect roots to the soil, extend the effective root radius, and greatly enlarge the absorbing surface area. Although the efficacy of root hairs in nutrient uptake, especially phosphorus, has been well recognized, their role in water uptake remains contentious. Here we review recent advances in this field, discuss the factors affecting the role of root hairs in water uptake, and propose future directions. We argue that root hair length and shrinkage, in response to soil drying, explain the apparently contradictory evidence currently available. Our analysis revealed that shorter and vulnerable root hairs (i.e. rice and maize) made little, if any, contribution to root water uptake. In contrast, relatively longer root hairs (i.e. barley) had a clear influence on root water uptake, transpiration, and hence plant response to soil drying. We conclude that the role of root hairs in water uptake is species (and probably soil) specific. We propose that a holistic understanding of the efficacy of root hairs in water uptake will require detailed studies of root hair length, turnover, and shrinkage in different species and contrasting soil textures.
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Affiliation(s)
- Gaochao Cai
- Chair of Soil Physics, Bayreuth Center of Ecology and Environmental Research (BayCEER), University of Bayreuth, D-95444, Bayreuth, Germany
| | - Mutez Ali Ahmed
- Chair of Soil Physics, Bayreuth Center of Ecology and Environmental Research (BayCEER), University of Bayreuth, D-95444, Bayreuth, Germany
- Department of Land, Air and Water Resources, University of California Davis, Davis, CA 95616, USA
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23
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Valenzuela FJ, Reineke D, Leventini D, Chen CCL, Barrett-Lennard EG, Colmer TD, Dodd IC, Shabala S, Brown P, Bazihizina N. Plant responses to heterogeneous salinity: agronomic relevance and research priorities. ANNALS OF BOTANY 2022; 129:499-518. [PMID: 35171228 PMCID: PMC9007098 DOI: 10.1093/aob/mcac022] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/18/2021] [Accepted: 02/14/2022] [Indexed: 06/12/2023]
Abstract
BACKGROUND Soil salinity, in both natural and managed environments, is highly heterogeneous, and understanding how plants respond to this spatiotemporal heterogeneity is increasingly important for sustainable agriculture in the era of global climate change. While the vast majority of research on crop response to salinity utilizes homogeneous saline conditions, a much smaller, but important, effort has been made in the past decade to understand plant molecular and physiological responses to heterogeneous salinity mainly by using split-root studies. These studies have begun to unravel how plants compensate for water/nutrient deprivation and limit salt stress by optimizing root-foraging in the most favourable parts of the soil. SCOPE This paper provides an overview of the patterns of salinity heterogeneity in rain-fed and irrigated systems. We then discuss results from split-root studies and the recent progress in understanding the physiological and molecular mechanisms regulating plant responses to heterogeneous root-zone salinity and nutrient conditions. We focus on mechanisms by which plants (salt/nutrient sensing, root-shoot signalling and water uptake) could optimize the use of less-saline patches within the root-zone, thereby enhancing growth under heterogeneous soil salinity conditions. Finally, we place these findings in the context of defining future research priorities, possible irrigation management and crop breeding opportunities to improve productivity from salt-affected lands.
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Affiliation(s)
| | - Daniela Reineke
- Department of Plant Sciences, University of California, Davis, CA, USA
| | - Dante Leventini
- Department of Plant Sciences, University of California, Davis, CA, USA
| | | | - Edward G Barrett-Lennard
- Land Management Group, Agriculture Discipline, College of Science, Health, Engineering and Education, Murdoch University, WA, Australia
- Department of Primary Industries and Regional Development, South Perth, WA, Australia
| | - Timothy D Colmer
- UWA School of Agriculture and Environment, The University of Western Australia, Crawley, WA, Australia
- Institute of Agriculture, The University of Western Australia, Crawley, WA, Australia
| | - Ian C Dodd
- The Lancaster Environment Centre, Lancaster University, Lancaster, UK
| | - Sergey Shabala
- Tasmanian Institute of Agriculture, University of Tasmania, Hobart, TAS 7001, Australia
- International Research Centre for Environmental Membrane Biology, Foshan University, Foshan 528000, China
| | - Patrick Brown
- Department of Plant Sciences, University of California, Davis, CA, USA
| | - Nadia Bazihizina
- Department of Agriculture, Food, Environment and Forestry, University of Florence, Florence, Italy
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24
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Song J, Lu D, Niu Y, Sun H, Zhang P, Dong W, Li Y, Zhang Y, Lu L, Men Q, Zhang X, Ren P, Chen C. Label-free quantitative proteomics of maize roots from different root zones provides insight into proteins associated with enhance water uptake. BMC Genomics 2022; 23:184. [PMID: 35247985 PMCID: PMC8898408 DOI: 10.1186/s12864-022-08394-y] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/03/2021] [Accepted: 02/15/2022] [Indexed: 02/07/2023] Open
Abstract
Background Maize is one of the most important food crops worldwide. Roots play important role in maize productivity through water and nutrient uptake from the soil. Improving maize root traits for efficient water uptake will help to optimize irrigation and contribute to sustainable maize production. Therefore, we investigated the protein profiles of maize cv. Anyu308 root system divided into Upper root zone (UR), Middle root (MR), and Lower root (LR), by label free quantitative shotgun proteomic approach (LFQ). The aim of our study was to identify proteins and mechanisms associated with enhanced water uptake in different maize root zones under automatic irrigation system. Results At field capacity, MR had the highest water uptake than the UR and LR. We identified a total of 489 differentially abundant proteins (DAPs) by pairwise comparison of MR, LR, and UR. Cluster analysis of DAPs revealed MR and UR had similar protein abundance patterns different from LR. More proteins were differentially abundant in MR/UR compared to LR/MR and LR/UR. Comparisons of protein profiles indicate that the DAPs in MR increased in abundance, compared to UR and LR which had more downregulated DAPs. The abundance patterns, functional category, and pathway enrichment analyses highlight chromatin structure and dynamics, ribosomal structures, polysaccharide metabolism, energy metabolism and transport, induction of water channels, inorganic ion transport, intracellular trafficking, and vesicular transport, and posttranslational modification as primary biological processes related to enhanced root water uptake in maize. Specifically, the abundance of histones, ribosomal proteins, and aquaporins, including mitochondrion electron transport proteins and the TCA cycle, underpinned MR’s enhanced water uptake. Furthermore, proteins involved in folding and vascular transport supported the radial transport of solute across cell membranes in UR and MR. Parallel reaction monitoring analysis was used to confirmed profile of the DAPs obtained by LFQ-based proteomics. Conclusion The list of differentially abundant proteins identified in MR are interesting candidates for further elucidation of their role in enhanced water uptake in maize root. Overall, the current results provided an insight into the mechanisms of maize root water uptake. Supplementary Information The online version contains supplementary material available at 10.1186/s12864-022-08394-y.
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25
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Cai G, Ahmed MA, Abdalla M, Carminati A. Root hydraulic phenotypes impacting water uptake in drying soils. PLANT, CELL & ENVIRONMENT 2022; 45:650-663. [PMID: 35037263 PMCID: PMC9303794 DOI: 10.1111/pce.14259] [Citation(s) in RCA: 27] [Impact Index Per Article: 13.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/26/2021] [Revised: 12/08/2021] [Accepted: 12/10/2021] [Indexed: 05/11/2023]
Abstract
Soil drying is a limiting factor for crop production worldwide. Yet, it is not clear how soil drying impacts water uptake across different soils, species, and root phenotypes. Here we ask (1) what root phenotypes improve the water use from drying soils? and (2) what root hydraulic properties impact water flow across the soil-plant continuum? The main objective is to propose a hydraulic framework to investigate the interplay between soil and root hydraulic properties on water uptake. We collected highly resolved data on transpiration, leaf and soil water potential across 11 crops and 10 contrasting soil textures. In drying soils, the drop in water potential at the soil-root interface resulted in a rapid decrease in soil hydraulic conductance, especially at higher transpiration rates. The analysis reveals that water uptake was limited by soil within a wide range of soil water potential (-6 to -1000 kPa), depending on both soil textures and root hydraulic phenotypes. We propose that a root phenotype with low root hydraulic conductance, long roots and/or long and dense root hairs postpones soil limitation in drying soils. The consequence of these root phenotypes on crop water use is discussed.
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Affiliation(s)
- Gaochao Cai
- Chair of Soil Physics, Bayreuth Center of Ecology and Environmental Research (BayCEER)University of BayreuthBayreuthGermany
| | - Mutez A. Ahmed
- Chair of Soil Physics, Bayreuth Center of Ecology and Environmental Research (BayCEER)University of BayreuthBayreuthGermany
- Department of Land, Air and Water ResourcesUniversity of California DavisDavisCaliforniaUnited States
| | - Mohanned Abdalla
- Chair of Soil Physics, Bayreuth Center of Ecology and Environmental Research (BayCEER)University of BayreuthBayreuthGermany
| | - Andrea Carminati
- Department of Environmental Systems Science, Physics of Soils and Terrestrial EcosystemsInstitute of Terrestrial Ecosystems, ETH ZürichZurichSwitzerland
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26
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G. Viana W, Scharwies JD, Dinneny JR. Deconstructing the root system of grasses through an exploration of development, anatomy and function. PLANT, CELL & ENVIRONMENT 2022; 45:602-619. [PMID: 35092025 PMCID: PMC9303260 DOI: 10.1111/pce.14270] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/21/2022] [Revised: 01/26/2022] [Accepted: 01/27/2022] [Indexed: 05/16/2023]
Abstract
Well-adapted root systems allow plants to grow under resource-limiting environmental conditions and are important determinants of yield in agricultural systems. Important staple crops such as rice and maize belong to the family of grasses, which develop a complex root system that consists of an embryonic root system that emerges from the seed, and a postembryonic nodal root system that emerges from basal regions of the shoot after germination. While early seedling establishment is dependent on the embryonic root system, the nodal root system, and its associated branches, gains in importance as the plant matures and will ultimately constitute the bulk of below-ground growth. In this review, we aim to give an overview of the different root types that develop in cereal grass root systems, explore the different physiological roles they play by defining their anatomical features, and outline the genetic networks that control their development. Through this deconstructed view of grass root system function, we provide a parts-list of elements that function together in an integrated root system to promote survival and crop productivity.
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Affiliation(s)
| | | | - José R. Dinneny
- Department of BiologyStanford UniversityStanfordCaliforniaUSA
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27
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Strock CF, Rangarajan H, Black CK, Schäfer ED, Lynch JP. Theoretical evidence that root penetration ability interacts with soil compaction regimes to affect nitrate capture. ANNALS OF BOTANY 2022; 129:315-330. [PMID: 34850823 PMCID: PMC8835659 DOI: 10.1093/aob/mcab144] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/29/2021] [Accepted: 11/26/2021] [Indexed: 05/14/2023]
Abstract
BACKGROUND AND AIMS Although root penetration of strong soils has been intensively studied at the scale of individual root axes, interactions between soil physical properties and soil foraging by whole plants are less clear. Here we investigate how variation in the penetration ability of distinct root classes and bulk density profiles common to real-world soils interact to affect soil foraging strategies. METHODS We utilize the functional-structural plant model 'OpenSimRoot' to simulate the growth of maize (Zea mays) root systems with variable penetration ability of axial and lateral roots in soils with (1) uniform bulk density, (2) plow pans and (3) increasing bulk density with depth. We also modify the availability and leaching of nitrate to uncover reciprocal interactions between these factors and the capture of mobile resources. KEY RESULTS Soils with plow pans and bulk density gradients affected overall size, distribution and carbon costs of the root system. Soils with high bulk density at depth impeded rooting depth and reduced leaching of nitrate, thereby improving the coincidence of nitrogen and root length. While increasing penetration ability of either axial or lateral root classes produced root systems of comparable net length, improved penetration of axial roots increased allocation of root length in deeper soil, thereby amplifying N acquisition and shoot biomass. Although enhanced penetration ability of both root classes was associated with greater root system carbon costs, the benefit to plant fitness from improved soil exploration and resource capture offset these. CONCLUSIONS While lateral roots comprise the bulk of root length, axial roots function as a scaffold determining the distribution of these laterals. In soils with high soil strength and leaching, root systems with enhanced penetration ability of axial roots have greater distribution of root length at depth, thereby improving capture of mobile resources.
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Affiliation(s)
- Christopher F Strock
- Department of Plant Science, The Pennsylvania State University, University Park, PA 16802, USA
| | - Harini Rangarajan
- Department of Plant Science, The Pennsylvania State University, University Park, PA 16802, USA
| | - Christopher K Black
- Department of Plant Science, The Pennsylvania State University, University Park, PA 16802, USA
| | - Ernst D Schäfer
- Department of Plant Science, The Pennsylvania State University, University Park, PA 16802, USA
| | - Jonathan P Lynch
- Department of Plant Science, The Pennsylvania State University, University Park, PA 16802, USA
- For correspondence. E-mail
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28
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Salicylic Acid Manipulates Ion Accumulation and Distribution in Favor of Salinity Tolerance in Chenopodium quinoa. INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH 2022; 19:ijerph19031576. [PMID: 35162599 PMCID: PMC8834976 DOI: 10.3390/ijerph19031576] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/26/2021] [Revised: 01/23/2022] [Accepted: 01/28/2022] [Indexed: 12/10/2022]
Abstract
Although the effects of salicylic acid (SA) on increasing plant growth in saline conditions have been well known, the mechanisms of induction of salinity tolerance, especially in quinoa (Chenopodium quinoa Willd.), are not fully understood. In the present work, two quinoa genotypes (Titicaca and Giza1) were treated with different SA concentrations (0, 0.75, and 1.5 mM) under varied irrigation water salinities (0, 7, 14, and 21 dS m−1). Salinity decreased shoot and root growth, potassium (K+) concentration, and potassium to sodium ratio (K/Na) and increased sodium (Na+) and chlorine (Cl−) concentrations in both cultivars. Calcium (Ca2+) and magnesium (Mg2+) concentrations increased in 7 dS m−1 but decreased in higher salinities. The growth and salinity tolerance of Giza1 were higher, while the growth of Giza1 increased and of Titicaca decreased in high salinity. Salicylic acid at 0.75-mM concentration increased shoot and root growth and improved the ions concentration in favor of the plant, while the 1.5-mM concentration either had no significant effect or had a negative impact. The ions distribution estimated by K/Na selectivity and storage factor (SF) indicated quinoa accumulated more ions in roots under saline conditions. Salicylic acid increased NaSF, ClSF, and MgSF and decreased KSF and CaSF, meaning less Na+, Cl−, and Mg2+ and more K+ and Ca2+ transferred to shoots in SA-treated plants. Importantly, Giza1, as the more tolerant cultivar, had higher NaSF and ClSF and lower KSF, CaSF, and MgSF. In general, the concentrations of ions in roots were higher than in shoots. The results indicated more ions accumulation in the root could be one of the most important mechanisms of salinity tolerance in quinoa, and the more tolerant cultivar (Giza1) transferred less Na+ and Cl− and more K+ and Ca2+ and Mg2+ to the shoot.
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29
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Meunier F, Couvreur V, Draye X, Lobet G, Huber K, Schroeder N, Jorda H, Koch A, Landl M, Schnepf A, Vanderborght J, Vereecken H, Javaux M. Investigating Soil-Root Interactions with the Numerical Model R-SWMS. Methods Mol Biol 2022; 2395:259-283. [PMID: 34822158 DOI: 10.1007/978-1-0716-1816-5_13] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
Abstract
In this chapter, we present the Root and Soil Water Movement and Solute transport model R-SWMS, which can be used to simulate flow and transport in the soil-plant system. The equations describing water flow in soil-root systems are presented and numerical solutions are provided. An application of R-SWMS is then briefly discussed, in which we combine in vivo and in silico experiments in order to decrypt water flow in the soil-root domain. More precisely, light transmission imaging experiments were conducted to generate data that can serve as input for the R-SWMS model. These data include the root system architecture, the soil hydraulic properties and the environmental conditions (initial soil water content and boundary conditions, BC). Root hydraulic properties were not acquired experimentally, but set to theoretical values found in the literature. In order to validate the results obtained by the model, the simulated and experimental water content distributions were compared. The model was then used to estimate variables that were not experimentally accessible, such as the actual root water uptake distribution and xylem water potential.
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Affiliation(s)
- Félicien Meunier
- Earth and Life Institute/Environmental Sciences, Université catholique de Louvain, Louvain, Belgium
| | - Valentin Couvreur
- Earth and Life Institute/Environmental Sciences, Université catholique de Louvain, Louvain, Belgium
| | - Xavier Draye
- Earth and Life Institute/Environmental Sciences, Université catholique de Louvain, Louvain, Belgium
| | - Guillaume Lobet
- Earth and Life Institute/Environmental Sciences, Université catholique de Louvain, Louvain, Belgium
- Agrosphere (IBG-3), Forschungszentrum Juelich GmbH, Jülich, Germany
| | - Katrin Huber
- Agrosphere (IBG-3), Forschungszentrum Juelich GmbH, Jülich, Germany
| | - Nathalie Schroeder
- Earth and Life Institute/Environmental Sciences, Université catholique de Louvain, Louvain, Belgium
- Department of Hydromechanics and Modelling of Hydrosystems, University of Stuttgart, Stuttgart, Germany
| | - Helena Jorda
- Agrosphere (IBG-3), Forschungszentrum Juelich GmbH, Jülich, Germany
| | - Axelle Koch
- Earth and Life Institute/Environmental Sciences, Université catholique de Louvain, Louvain, Belgium
| | - Magdalena Landl
- Agrosphere (IBG-3), Forschungszentrum Juelich GmbH, Jülich, Germany
| | - Andrea Schnepf
- Agrosphere (IBG-3), Forschungszentrum Juelich GmbH, Jülich, Germany
| | - Jan Vanderborght
- Agrosphere (IBG-3), Forschungszentrum Juelich GmbH, Jülich, Germany
| | - Harry Vereecken
- Agrosphere (IBG-3), Forschungszentrum Juelich GmbH, Jülich, Germany
| | - Mathieu Javaux
- Earth and Life Institute/Environmental Sciences, Université catholique de Louvain, Louvain, Belgium.
- Agrosphere (IBG-3), Forschungszentrum Juelich GmbH, Jülich, Germany.
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30
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Abdalla M, Ahmed MA. Arbuscular Mycorrhiza Symbiosis Enhances Water Status and Soil-Plant Hydraulic Conductance Under Drought. FRONTIERS IN PLANT SCIENCE 2021; 12:722954. [PMID: 34721455 PMCID: PMC8551442 DOI: 10.3389/fpls.2021.722954] [Citation(s) in RCA: 18] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/09/2021] [Accepted: 09/20/2021] [Indexed: 05/27/2023]
Abstract
Recent studies have identified soil drying as a dominant driver of transpiration reduction at the global scale. Although Arbuscular Mycorrhiza Fungi (AMF) are assumed to play a pivotal role in plant response to soil drying, studies investigating the impact of AMF on plant water status and soil-plant hydraulic conductance are lacking. Thus, the main objective of this study was to investigate the influence of AMF on soil-plant conductance and plant water status of tomato under drought. We hypothesized that AMF limit the drop in matric potential across the rhizosphere, especially in drying soil. The underlying mechanism is that AMF extend the effective root radius and hence reduce the water fluxes at the root-soil interface. The follow-up hypothesis is that AMF enhance soil-plant hydraulic conductance and plant water status during soil drying. To test these hypotheses, we measured the relation between transpiration rate, soil and leaf water potential of tomato with reduced mycorrhiza colonization (RMC) and the corresponding wild type (WT). We inoculated the soil of the WT with Rhizophagus irregularis spores to potentially upsurge symbiosis initiation. During soil drying, leaf water potential of the WT did not drop below -0.8MPa during the first 6days after withholding irrigation, while leaf water potential of RMC dropped below -1MPa already after 4days. Furthermore, AMF enhanced the soil-plant hydraulic conductance of the WT during soil drying. In contrast, soil-plant hydraulic conductance of the RMC declined more abruptly as soil dried. We conclude that AMF maintained the hydraulic continuity between root and soil in drying soils, hereby reducing the drop in matric potential at the root-soil interface and enhancing soil-plant hydraulic conductance of tomato under edaphic stress. Future studies will investigate the role of AMF on soil-plant hydraulic conductance and plant water status among diverse plant species growing in contrasting soil textures.
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Affiliation(s)
- Mohanned Abdalla
- Chair of Soil Physics, Bayreuth Center of Ecology and Environmental Research (BayCEER), University of Bayreuth, Bayreuth, Germany
- Department of Horticulture, Faculty of Agriculture, University of Khartoum, Khartoum North, Sudan
| | - Mutez Ali Ahmed
- Chair of Soil Physics, Bayreuth Center of Ecology and Environmental Research (BayCEER), University of Bayreuth, Bayreuth, Germany
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31
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Liu S, Barrow CS, Hanlon M, Lynch JP, Bucksch A. DIRT/3D: 3D root phenotyping for field-grown maize (Zea mays). PLANT PHYSIOLOGY 2021; 187:739-757. [PMID: 34608967 PMCID: PMC8491025 DOI: 10.1093/plphys/kiab311] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/07/2021] [Accepted: 06/09/2021] [Indexed: 05/25/2023]
Abstract
The development of crops with deeper roots holds substantial promise to mitigate the consequences of climate change. Deeper roots are an essential factor to improve water uptake as a way to enhance crop resilience to drought, to increase nitrogen capture, to reduce fertilizer inputs, and to increase carbon sequestration from the atmosphere to improve soil organic fertility. A major bottleneck to achieving these improvements is high-throughput phenotyping to quantify root phenotypes of field-grown roots. We address this bottleneck with Digital Imaging of Root Traits (DIRT)/3D, an image-based 3D root phenotyping platform, which measures 18 architecture traits from mature field-grown maize (Zea mays) root crowns (RCs) excavated with the Shovelomics technique. DIRT/3D reliably computed all 18 traits, including distance between whorls and the number, angles, and diameters of nodal roots, on a test panel of 12 contrasting maize genotypes. The computed results were validated through comparison with manual measurements. Overall, we observed a coefficient of determination of r2>0.84 and a high broad-sense heritability of Hmean2> 0.6 for all but one trait. The average values of the 18 traits and a developed descriptor to characterize complete root architecture distinguished all genotypes. DIRT/3D is a step toward automated quantification of highly occluded maize RCs. Therefore, DIRT/3D supports breeders and root biologists in improving carbon sequestration and food security in the face of the adverse effects of climate change.
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Affiliation(s)
- Suxing Liu
- Department of Plant Biology, University of Georgia, Athens, Georgia 30602, USA
- Warnell School of Forestry and Natural Resources, University of Georgia, Athens, Georgia 30602, USA
- Institute of Bioinformatics, University of Georgia, Athens, Georgia 30602, USA
| | | | - Meredith Hanlon
- Department of Plant Science, Pennsylvania State University, State College, Pennsylvania 16802, USA
| | - Jonathan P. Lynch
- Department of Plant Science, Pennsylvania State University, State College, Pennsylvania 16802, USA
| | - Alexander Bucksch
- Department of Plant Biology, University of Georgia, Athens, Georgia 30602, USA
- Warnell School of Forestry and Natural Resources, University of Georgia, Athens, Georgia 30602, USA
- Institute of Bioinformatics, University of Georgia, Athens, Georgia 30602, USA
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32
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Cai G, Carminati A, Abdalla M, Ahmed MA. Soil textures rather than root hairs dominate water uptake and soil-plant hydraulics under drought. PLANT PHYSIOLOGY 2021; 187:858-872. [PMID: 34608949 PMCID: PMC8491061 DOI: 10.1093/plphys/kiab271] [Citation(s) in RCA: 17] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/06/2021] [Accepted: 05/21/2021] [Indexed: 05/11/2023]
Abstract
Although the role of root hairs (RHs) in nutrient uptake is well documented, their role in water uptake and drought tolerance remains controversial. Maize (Zea mays) wild-type and its hair-defective mutant (Mut; roothairless 3) were grown in two contrasting soil textures (sand and loam). We used a root pressure chamber to measure the relation between transpiration rate (E) and leaf xylem water potential (ψleaf_x) during soil drying. Our hypotheses were: (1) RHs extend root-soil contact and reduce the ψleaf_x decline at high E in dry soils; (2) the impact of RHs is more pronounced in sand; and (3) Muts partly compensate for lacking RHs by producing longer and/or thicker roots. The ψleaf_x(E) relation was linear in wet conditions and became nonlinear as the soils dried. This nonlinearity occurred more abruptly and at less negative matric potentials in sand (ca. -10 kPa) than in loam (ca. -100 kPa). At more negative soil matric potentials, soil hydraulic conductance became smaller than root hydraulic conductance in both soils. Both genotypes exhibited 1.7 times longer roots in loam, but 1.6 times thicker roots in sand. No differences were observed in the ψleaf_x(E) relation and active root length between the two genotypes. In maize, RHs had a minor contribution to soil-plant hydraulics in both soils and their putative role in water uptake was smaller than that reported for barley (Hordeum vulgare). These results suggest that the role of RHs cannot be easily generalized across species and soil textures affect the response of root hydraulics to soil drying.
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Affiliation(s)
- Gaochao Cai
- Chair of Soil Physics, Bayreuth Center of Ecology and Environmental Research (BayCEER), University of Bayreuth, Bayreuth, 95447, Germany
- Biogeochemistry of Agroecosystems, University of Göttingen, Göttingen, 37077, Germany
| | - Andrea Carminati
- Department of Environmental Systems Science, Physics of Soils and Terrestrial Ecosystems, Institute of Terrestrial Ecosystems, ETH Zürich, Zurich, 8092, Switzerland
| | - Mohanned Abdalla
- Chair of Soil Physics, Bayreuth Center of Ecology and Environmental Research (BayCEER), University of Bayreuth, Bayreuth, 95447, Germany
| | - Mutez Ali Ahmed
- Chair of Soil Physics, Bayreuth Center of Ecology and Environmental Research (BayCEER), University of Bayreuth, Bayreuth, 95447, Germany
- Biogeochemistry of Agroecosystems, University of Göttingen, Göttingen, 37077, Germany
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33
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Baetsen-Young AM, Araldi Da Silva G, Kandel YR, Jacobs JL, Byrne AM, Mueller DS, Smith DL, Tenuta AU, Wise KA, Day B, Chilvers MI. Influence of Fusarium virguliforme Temporal Colonization of Corn, Tillage, and Residue Management on Soybean Sudden Death Syndrome and Soybean Yield. PLANT DISEASE 2021; 105:3250-3260. [PMID: 33406860 DOI: 10.1094/pdis-09-20-1964-re] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
The asymptomatic host range of Fusarium virguliforme includes corn, a common crop rotated with soybean that we hypothesize may alter F. virguliforme population dynamics and disease management. A field-based approach explored the temporal dynamics of F. virguliforme colonization of corn and soybean roots under different tillage and residue managements. Experiments were conducted in Iowa, Indiana, Michigan, and Wisconsin, United States and Ontario, Canada from 2016 to 2018. Corn and soybean roots were sampled at consecutive timepoints between 1 and 16 weeks after planting. DNA was extracted from all roots and analyzed by real-time quantitative PCR for F. virguliforme quantification. Trials were rotated between corn and soybean, containing a two-by-two factorial of tillage (no-tilled or tilled) and corn residue (with or without) in several experimental designs. In 2016, low amounts (approximately 100 fg per 10 mg of root tissue) of F. virguliforme were detected in the inoculated Iowa, Indiana, and Michigan locations and noninoculated Wisconsin corn fields. However, in 2017, greater levels of F. virguliforme DNA were detected in Iowa, Indiana, and Michigan across sampling timepoints. Tillage practices showed inconsistent effects on F. virguliforme root colonization and sudden death syndrome (SDS) foliar symptoms among trials and locations. However, residue management did not alter root colonization of corn or soybean by F. virguliforme. Plots with corn residue had greater SDS foliar disease index in Iowa in 2016. However, this trend was not observed across the site-years, indicating that corn residue may occasionally increase SDS foliar symptoms depending on the disease level and soil and weather factors.
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Affiliation(s)
- Amy M Baetsen-Young
- Department of Plant, Soil and Microbial Sciences, Michigan State University, East Lansing, MI 48824, U.S.A
- Plant Resilience Institute, Michigan State University, East Lansing, MI 48824, U.S.A
| | | | - Yuba R Kandel
- Department of Plant Pathology and Microbiology, Iowa State University, Ames, IA 50011, U.S.A
| | - Janette L Jacobs
- Department of Plant Pathology and Microbiology, Iowa State University, Ames, IA 50011, U.S.A
| | - Adam M Byrne
- Department of Plant Pathology and Microbiology, Iowa State University, Ames, IA 50011, U.S.A
| | - Daren S Mueller
- Department of Plant Pathology and Microbiology, Iowa State University, Ames, IA 50011, U.S.A
| | - Damon L Smith
- Department of Plant Pathology, University of Wisconsin-Madison, Madison, WI 53706, U.S.A
| | - Albert U Tenuta
- Ontario Ministry of Agriculture, Food and Rural Affairs, University of Guelph, Guelph, ON N0P2C0, Canada
| | - Kiersten A Wise
- Department of Plant Pathology, University of Kentucky Research and Education Center, Princeton, KY 43445, U.S.A
| | - Brad Day
- Department of Plant, Soil and Microbial Sciences, Michigan State University, East Lansing, MI 48824, U.S.A
- Plant Resilience Institute, Michigan State University, East Lansing, MI 48824, U.S.A
| | - Martin I Chilvers
- Department of Plant, Soil and Microbial Sciences, Michigan State University, East Lansing, MI 48824, U.S.A
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Kawasaki A, Dennis PG, Forstner C, Raghavendra AKH, Richardson AE, Watt M, Mathesius U, Gilliham M, Ryan PR. The microbiomes on the roots of wheat (Triticum aestivum L.) and rice (Oryza sativa L.) exhibit significant differences in structure between root types and along root axes. FUNCTIONAL PLANT BIOLOGY : FPB 2021; 48:871-888. [PMID: 33934748 DOI: 10.1071/fp20351] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/12/2020] [Accepted: 03/22/2021] [Indexed: 05/06/2023]
Abstract
There is increasing interest in understanding how the microbial communities on roots can be manipulated to improve plant productivity. Root systems are not homogeneous organs but are comprised of different root types of various ages and anatomies that perform different functions. Relatively little is known about how this variation influences the distribution and abundance of microorganisms on roots and in the rhizosphere. Such information is important for understanding how root-microbe interactions might affect root function and prevent diseases. This study tested specific hypotheses related to the spatial variation of bacterial and fungal communities on wheat (Triticum aestivum L.) and rice (Oryza sativa L.) roots grown in contrasting soils. We demonstrate that microbial communities differed significantly between soil type, between host species, between root types, and with position along the root axes. The magnitude of variation between different root types and along individual roots was comparable with the variation detected between different plant species. We discuss the general patterns that emerged in this variation and identify bacterial and fungal taxa that were consistently more abundant on specific regions of the root system. We argue that these patterns should be measured more routinely so that localised root-microbe interactions can be better linked with root system design, plant health and performance.
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Affiliation(s)
- Akitomo Kawasaki
- CSIRO Agriculture and Food, PO Box 1700, Canberra, ACT 2601, Australia; and Present address: NSW Department of Primary Industries, Elizabeth Macarthur Agricultural Institute, Menangle, NSW 2568, Australia
| | - Paul G Dennis
- School of Earth and Environmental Sciences, Faculty of Sciences, The University of Queensland, St Lucia, Qld 4072, Australia
| | - Christian Forstner
- School of Earth and Environmental Sciences, Faculty of Sciences, The University of Queensland, St Lucia, Qld 4072, Australia
| | - Anil K H Raghavendra
- School of Earth and Environmental Sciences, Faculty of Sciences, The University of Queensland, St Lucia, Qld 4072, Australia; and Present address: NSW Department of Primary Industries, Elizabeth Macarthur Agricultural Institute, Menangle, NSW 2568, Australia
| | - Alan E Richardson
- CSIRO Agriculture and Food, PO Box 1700, Canberra, ACT 2601, Australia
| | - Michelle Watt
- School of BioSciences, University of Melbourne, Parkville, Vic. 3010, Australia
| | - Ulrike Mathesius
- Division of Plant Sciences, Research School of Biology, Australian National University, Canberra, ACT 2601, Australia
| | - Matthew Gilliham
- ARC Centre of Excellence in Plant Energy Biology, School of Agriculture, Food and Wine, Waite Research Institute, University of Adelaide, Glen Osmond, SA 5064, Australia
| | - Peter R Ryan
- CSIRO Agriculture and Food, PO Box 1700, Canberra, ACT 2601, Australia; and Corresponding author.
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Loshchilov I, Del Dottore E, Mazzolai B, Floreano D. Conditions for the emergence of circumnutations in plant roots. PLoS One 2021; 16:e0252202. [PMID: 34038485 PMCID: PMC8153425 DOI: 10.1371/journal.pone.0252202] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2020] [Accepted: 05/11/2021] [Indexed: 11/28/2022] Open
Abstract
The plant root system shows remarkably complex behaviors driven by environmental cues and internal dynamics, whose interplay remains largely unknown. A notable example is circumnutation growth movements, which are growth oscillations from side to side of the root apex. Here we describe a model capable of replicating root growth behaviors, which we used to analyze the role of circumnuntations, revealing their emergence I) under gravitropic stress, as a combination of signal propagation and sensitivity to the signal carriers; II) as a result of the interplay between gravitropic and thigmotropic responses; and III) as a behavioral strategy to detect and react to resource gradients. The latter function requires the presence of a hypothetical internal oscillator whose parameters are regulated by the perception of environmental resources.
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Affiliation(s)
- Ilya Loshchilov
- Laboratory of Intelligent Systems, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland
| | | | - Barbara Mazzolai
- Center for Micro-Biorobotics, Istituto Italiano di Tecnologia, Pontedera, Italy
| | - Dario Floreano
- Laboratory of Intelligent Systems, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland
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Tötzke C, Kardjilov N, Hilger A, Rudolph-Mohr N, Manke I, Oswald SE. Three-dimensional in vivo analysis of water uptake and translocation in maize roots by fast neutron tomography. Sci Rep 2021; 11:10578. [PMID: 34012044 PMCID: PMC8134433 DOI: 10.1038/s41598-021-90062-4] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2020] [Accepted: 05/05/2021] [Indexed: 11/29/2022] Open
Abstract
Root water uptake is an essential process for terrestrial plants that strongly affects the spatiotemporal distribution of water in vegetated soil. Fast neutron tomography is a recently established non-invasive imaging technique capable to capture the 3D architecture of root systems in situ and even allows for tracking of three-dimensional water flow in soil and roots. We present an in vivo analysis of local water uptake and transport by roots of soil-grown maize plants-for the first time measured in a three-dimensional time-resolved manner. Using deuterated water as tracer in infiltration experiments, we visualized soil imbibition, local root uptake, and tracked the transport of deuterated water throughout the fibrous root system for a day and night situation. This revealed significant differences in water transport between different root types. The primary root was the preferred water transport path in the 13-days-old plants while seminal roots of comparable size and length contributed little to plant water supply. The results underline the unique potential of fast neutron tomography to provide time-resolved 3D in vivo information on the water uptake and transport dynamics of plant root systems, thus contributing to a better understanding of the complex interactions of plant, soil and water.
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Affiliation(s)
- Christian Tötzke
- Institute of Environmental Science and Geography, University of Potsdam, Potsdam, Germany.
| | - Nikolay Kardjilov
- Institute of Applied Materials, Helmholtz Centre for Materials and Energy, Berlin, Germany
| | - André Hilger
- Institute of Applied Materials, Helmholtz Centre for Materials and Energy, Berlin, Germany
| | - Nicole Rudolph-Mohr
- Institute of Environmental Science and Geography, University of Potsdam, Potsdam, Germany
| | - Ingo Manke
- Institute of Applied Materials, Helmholtz Centre for Materials and Energy, Berlin, Germany
| | - Sascha E Oswald
- Institute of Environmental Science and Geography, University of Potsdam, Potsdam, Germany
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Srivastava AK, Pandey M, Ghate T, Kumar V, Upadhyay MK, Majumdar A, Sanjukta AK, Agrawal AK, Bose S, Srivastava S, Suprasanna P. Chemical intervention for enhancing growth and reducing grain arsenic accumulation in rice. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2021; 276:116719. [PMID: 33640652 DOI: 10.1016/j.envpol.2021.116719] [Citation(s) in RCA: 15] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/27/2020] [Revised: 02/05/2021] [Accepted: 02/06/2021] [Indexed: 06/12/2023]
Abstract
Arsenic (As) is a ubiquitous environmental carcinogen that enters the human food chain mainly through rice grains. In the present study, we evaluated the potential of thiourea (TU; non-physiological reactive oxygen species scavenger) in mitigating the negative effects of arsenic (As) stress in indica rice variety IR64, with the overall aim to reduce grain As accumulation. At seedling stage, As + TU treatment induced the formation of more numerous and longer crown roots compared with As alone. The As accumulation in main root, crown root, lower leaf and upper leaf was significantly reduced to 0.1-, 0.14-, 0.16-, 0.14-fold, respectively in As + TU treated seedlings compared with those of As alone. This reduced As accumulation was also coincided with light-dependent suppression in the expression levels of aquaporins and photosynthesis-related genes in As + TU treated roots. In addition, the foliar-supplemented TU under As-stress maintained reducing redox conditions which decreased the rate of As accumulation in flag leaves and, eventually grain As by 0.53-fold compared with those of As treatment. The agronomic feasibility of TU was validated under naturally As contaminated sites of Nadia (West Bengal, India). The tiller numbers and crop productivity (kg seed/ha) of TU-sprayed plants were increased by 1.5- and 1.18-fold, respectively; while, grain As accumulation was reduced by 0.36-fold compared with those of water-sprayed control. Thus, this study established TU application as a sustainable solution for cultivating rice in As-contaminated field conditions.
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Affiliation(s)
- Ashish Kumar Srivastava
- Nuclear Agriculture and Biotechnology Division, Bhabha Atomic Research Centre, Mumbai, Maharashtra, 400 085, India; Homi Bhabha National Institute, Mumbai, 400094, India.
| | - Manish Pandey
- Nuclear Agriculture and Biotechnology Division, Bhabha Atomic Research Centre, Mumbai, Maharashtra, 400 085, India
| | - Tejashree Ghate
- Nuclear Agriculture and Biotechnology Division, Bhabha Atomic Research Centre, Mumbai, Maharashtra, 400 085, India
| | - Vikash Kumar
- Nuclear Agriculture and Biotechnology Division, Bhabha Atomic Research Centre, Mumbai, Maharashtra, 400 085, India
| | - Munish Kumar Upadhyay
- Plant Stress Biology Laboratory, Institute of Environment and Sustainable Development, Banaras Hindu University, Varanasi, 221005, UP, India
| | - Arnab Majumdar
- Department of Earth Sciences, Indian Institute of Science Education and Research-Kolkata, Mohanpur, West Bengal, 741246, India
| | - Abhay Kumar Sanjukta
- Analytical Chemistry Division, Bhabha Atomic Research Centre, Mumbai, Maharashtra, 400 085, India
| | - Ashish Kumar Agrawal
- Technical Physics Division, Bhabha Atomic Research Centre, Mumbai, Maharashtra, 400 085, India
| | - Sutapa Bose
- Department of Earth Sciences, Indian Institute of Science Education and Research-Kolkata, Mohanpur, West Bengal, 741246, India
| | - Sudhakar Srivastava
- Plant Stress Biology Laboratory, Institute of Environment and Sustainable Development, Banaras Hindu University, Varanasi, 221005, UP, India
| | - Penna Suprasanna
- Nuclear Agriculture and Biotechnology Division, Bhabha Atomic Research Centre, Mumbai, Maharashtra, 400 085, India; Homi Bhabha National Institute, Mumbai, 400094, India
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Rao S, Armstrong R, Silva-Perez V, Tefera AT, Rosewarne GM. Pulse Root Ideotype for Water Stress in Temperate Cropping System. PLANTS 2021; 10:plants10040692. [PMID: 33916833 PMCID: PMC8067327 DOI: 10.3390/plants10040692] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/08/2021] [Revised: 04/01/2021] [Accepted: 04/01/2021] [Indexed: 11/16/2022]
Abstract
Pulses are a key component of crop production systems in Southern Australia due to their rotational benefits and potential profit margins. However, cultivation in temperate cropping systems such as that of Southern Australia is limited by low soil water availability and subsoil constraints. This limitation of soil water is compounded by the irregular rainfall, resulting in the absence of plant available water at depth. An increase in the productivity of key pulses and expansion into environments and soil types traditionally considered marginal for their growth will require improved use of the limited soil water and adaptation to sub soil constrains. Roots serve as the interface between soil constraints and the whole plant. Changes in root system architecture (RSA) can be utilised as an adaptive strategy in achieving yield potential under limited rainfall, heterogenous distribution of resources and other soil-based constraints. The existing literature has identified a “‘Steep, Deep and Cheap” root ideotype as a preferred RSA. However, this idiotype is not efficient in a temperate system where plant available water is limited at depth. In addition, this root ideotype and other root architectural studies have focused on cereal crops, which have different structures and growth patterns to pulses due to their monocotyledonous nature and determinant growth habit. The paucity of pulse-specific root architectural studies warrants further investigations into pulse RSA, which should be combined with an examination of the existing variability of known genetic traits so as to develop strategies to alleviate production constraints through either tolerance or avoidance mechanisms. This review proposes a new model of root system architecture of “Wide, Shallow and Fine” roots based on pulse roots in temperate cropping systems. The proposed ideotype has, in addition to other root traits, a root density concentrated in the upper soil layers to capture in-season rainfall before it is lost due to evaporation. The review highlights the potential to achieve this in key pulse crops including chickpea, lentil, faba bean, field pea and lupin. Where possible, comparisons to determinate crops such as cereals have also been made. The review identifies the key root traits that have shown a degree of adaptation via tolerance or avoidance to water stress and documents the current known variability that exists in and amongst pulse crops setting priorities for future research.
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Nazari M, Riebeling S, Banfield CC, Akale A, Crosta M, Mason-Jones K, Dippold MA, Ahmed MA. Mucilage Polysaccharide Composition and Exudation in Maize From Contrasting Climatic Regions. FRONTIERS IN PLANT SCIENCE 2020; 11:587610. [PMID: 33363554 PMCID: PMC7752898 DOI: 10.3389/fpls.2020.587610] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/26/2020] [Accepted: 11/18/2020] [Indexed: 05/28/2023]
Abstract
Mucilage, a gelatinous substance comprising mostly polysaccharides, is exuded by maize nodal and underground root tips. Although mucilage provides several benefits for rhizosphere functions, studies on the variation in mucilage amounts and its polysaccharide composition between genotypes are still lacking. In this study, eight maize (Zea mays L.) genotypes from different globally distributed agroecological zones were grown under identical abiotic conditions in a randomized field experiment. Mucilage exudation amount, neutral sugars and uronic acids were quantified. Galactose (∼39-42%), fucose (∼22-30%), mannose (∼11-14%), and arabinose (∼8-11%) were the major neutral sugars in nodal root mucilage. Xylose (∼1-4%), and glucose (∼1-4%) occurred only in minor proportions. Glucuronic acid (∼3-5%) was the only uronic acid detected. The polysaccharide composition differed significantly between maize genotypes. Mucilage exudation was 135 and 125% higher in the Indian (900 M Gold) and Kenyan (DH 02) genotypes than in the central European genotypes, respectively. Mucilage exudation was positively associated with the vapor pressure deficit of the genotypes' agroecological zone. The results indicate that selection for environments with high vapor pressure deficit may favor higher mucilage exudation, possibly because mucilage can delay the onset of hydraulic failure during periods of high vapor pressure deficit. Genotypes from semi-arid climates might offer sources of genetic material for beneficial mucilage traits.
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Affiliation(s)
- Meisam Nazari
- Division of Biogeochemistry of Agroecosystems, Georg-August University of Göttingen, Göttingen, Germany
| | - Sophie Riebeling
- Division of Biogeochemistry of Agroecosystems, Georg-August University of Göttingen, Göttingen, Germany
| | - Callum C. Banfield
- Division of Biogeochemistry of Agroecosystems, Georg-August University of Göttingen, Göttingen, Germany
| | - Asegidew Akale
- Chair of Soil Physics, Bayreuth Center of Ecology and Environmental Research (BayCEER), University of Bayreuth, Bayreuth, Germany
| | - Margherita Crosta
- Chair of Soil Physics, Bayreuth Center of Ecology and Environmental Research (BayCEER), University of Bayreuth, Bayreuth, Germany
| | - Kyle Mason-Jones
- Department of Terrestrial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), Wageningen, Netherlands
| | - Michaela A. Dippold
- Division of Biogeochemistry of Agroecosystems, Georg-August University of Göttingen, Göttingen, Germany
| | - Mutez Ali Ahmed
- Division of Biogeochemistry of Agroecosystems, Georg-August University of Göttingen, Göttingen, Germany
- Chair of Soil Physics, Bayreuth Center of Ecology and Environmental Research (BayCEER), University of Bayreuth, Bayreuth, Germany
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40
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van Dusschoten D, Kochs J, Kuppe CW, Sydoruk VA, Couvreur V, Pflugfelder D, Postma JA. Spatially Resolved Root Water Uptake Determination Using a Precise Soil Water Sensor. PLANT PHYSIOLOGY 2020; 184:1221-1235. [PMID: 32887733 PMCID: PMC7608171 DOI: 10.1104/pp.20.00488] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/29/2020] [Accepted: 08/09/2020] [Indexed: 06/08/2023]
Abstract
To answer long-standing questions about how plants use and regulate water, an affordable, noninvasive way to determine local root water uptake (RWU) is required. Here, we present a sensor, the soil water profiler (SWaP), which can determine local soil water content (θ) with a precision of 6.10-5 cm3 ⋅ cm-3, an accuracy of 0.002 cm3 ⋅ cm-3, a temporal resolution of 24 min, and a one-dimensional spatial resolution of 1 cm. The sensor comprises two copper sheets, integrated into a sleeve and connected to a coil, which form a resonant circuit. A vector network analyzer, inductively coupled to the resonant circuit, measures the resonance frequency, against which θ was calibrated. The sensors were integrated into a positioning system, which measures θ along the depth of cylindrical tubes. When combined with modulating light (4-h period) and resultant modulating plant transpiration, the SWaP enables quantification of the component of RWU distribution that varies proportionally with total plant water uptake, and distinguishes it from soil water redistribution via soil pores and roots. Additionally, as a young, growing maize (Zea mays) plant progressively tapped its soil environment dry, we observed clear changes in plant-driven RWU and soil water redistribution profiles. Our SWaP setup can measure the RWU and redistribution of sandy-soil water content with unprecedented precision. The SWaP is therefore a promising device offering new insights into soil-plant hydrology, with applications for functional root phenotyping in nonsaline, temperature-controlled conditions, at low cost.
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Affiliation(s)
- Dagmar van Dusschoten
- Forschungszentrum Jülich, Institute of Bio- and Geosciences-Plant Sciences, 52425 Jülich, Germany
| | - Johannes Kochs
- Forschungszentrum Jülich, Institute of Bio- and Geosciences-Plant Sciences, 52425 Jülich, Germany
| | - Christian W Kuppe
- Forschungszentrum Jülich, Institute of Bio- and Geosciences-Plant Sciences, 52425 Jülich, Germany
| | - Viktor A Sydoruk
- Forschungszentrum Jülich, Institute of Bio- and Geosciences-Plant Sciences, 52425 Jülich, Germany
| | - Valentin Couvreur
- University of Louvain, Earth and Life Institute, 1348 Louvain-la-Neuve, Belgium
| | - Daniel Pflugfelder
- Forschungszentrum Jülich, Institute of Bio- and Geosciences-Plant Sciences, 52425 Jülich, Germany
| | - Johannes A Postma
- Forschungszentrum Jülich, Institute of Bio- and Geosciences-Plant Sciences, 52425 Jülich, Germany
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41
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Goswami M, Deka S. Isolation of a novel rhizobacteria having multiple plant growth promoting traits and antifungal activity against certain phytopathogens. Microbiol Res 2020; 240:126516. [DOI: 10.1016/j.micres.2020.126516] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/17/2020] [Revised: 05/03/2020] [Accepted: 05/04/2020] [Indexed: 10/24/2022]
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Strock CF, Lynch JP. Root secondary growth: an unexplored component of soil resource acquisition. ANNALS OF BOTANY 2020; 126:205-218. [PMID: 32588876 PMCID: PMC7523590 DOI: 10.1093/aob/mcaa068] [Citation(s) in RCA: 20] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/17/2020] [Indexed: 05/06/2023]
Abstract
BACKGROUND AND AIMS Despite recent progress in elucidating the molecular basis of secondary growth (cambial growth), the functional implications of this developmental process remain poorly understood. Targeted studies exploring how abiotic and biotic factors affect this process, as well as the relevance of secondary growth to fitness of annual dicotyledonous crop species under stress, are almost entirely absent from the literature. Specifically, the physiological role of secondary growth in roots has been completely neglected yet entails a unique array of implications for plant performance that are distinct from secondary growth in shoot tissue. SCOPE Since roots are directly responsible for soil resource capture, understanding of the fitness landscape of root phenotypes is important in both basic and applied plant biology. Interactions between root secondary growth, edaphic conditions and soil resource acquisition may have significant effects on plant fitness. Our intention here is not to provide a comprehensive review of a sparse and disparate literature, but rather to highlight knowledge gaps, propose hypotheses and identify opportunities for novel and agriculturally relevant research pertaining to secondary growth of roots. This viewpoint: (1) summarizes evidence from our own studies and other published work; (2) proposes hypotheses regarding the fitness landscape of secondary growth of roots in annual dicotyledonous species for abiotic and biotic stress; and (3) highlights the importance of directing research efforts to this topic within an agricultural context. CONCLUSIONS Secondary growth of the roots of annual dicots has functional significance with regards to soil resource acquisition and transport, interactions with soil organisms and carbon sequestration. Research on these topics would contribute significantly toward understanding the agronomic value of secondary growth of roots for crop improvement.
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Affiliation(s)
- Christopher F Strock
- Department of Plant Science, The Pennsylvania State University, University Park, PA, USA
| | - Jonathan P Lynch
- Department of Plant Science, The Pennsylvania State University, University Park, PA, USA
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Liu Z, Giehl RFH, Hartmann A, Hajirezaei MR, Carpentier S, von Wirén N. Seminal and Nodal Roots of Barley Differ in Anatomy, Proteome and Nitrate Uptake Capacity. PLANT & CELL PHYSIOLOGY 2020; 61:1297-1308. [PMID: 32379871 DOI: 10.1093/pcp/pcaa059] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/22/2019] [Accepted: 04/28/2020] [Indexed: 06/11/2023]
Abstract
The root system of barley plants is composed of embryogenic, seminal roots as well as lateral and nodal roots that are formed postembryonically from seminal roots and from the basal part of shoots, respectively. Due to their distinct developmental origin, seminal and nodal roots may differ in function during plant development; however, a clear comparison between these two root types has not yet been undertaken. In this study, anatomical, proteomic and physiological traits were compared between seminal and nodal roots of similar developmental stages. Nodal roots have larger diameter, larger metaxylem area and a larger number of metaxylem vessels than seminal roots. Proteome profiling uncovered a set of root-type-specific proteins, including proteins related to the cell wall and cytoskeleton organization, which could potentially be implicated with differential metaxylem development. We also found that nodal roots have higher levels of auxin, which is known to trigger metaxylem development. At millimolar nitrate supply, nodal roots had approximately 2-fold higher nitrate uptake and root-to-shoot translocation capacities than seminal roots, whereas no differences were found at micromolar nitrate supply. Since these marked differences were not reflected by the transcript levels of low-affinity nitrate transporter genes, we hypothesize that the larger metaxylem volume of nodal roots enhances predominantly the low-affinity uptake and translocation capacities of nutrients that are transported with the bulk flow of water, like nitrate.
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Affiliation(s)
- Zhaojun Liu
- Molecular Plant Nutrition, Department of Physiology and Cell Biology, Leibniz Institute of Plant Genetics and Crop Plant Research, Corrensstrasse 3, 06466 Gatersleben, Germany
| | - Ricardo Fabiano Hettwer Giehl
- Molecular Plant Nutrition, Department of Physiology and Cell Biology, Leibniz Institute of Plant Genetics and Crop Plant Research, Corrensstrasse 3, 06466 Gatersleben, Germany
| | - Anja Hartmann
- Molecular Plant Nutrition, Department of Physiology and Cell Biology, Leibniz Institute of Plant Genetics and Crop Plant Research, Corrensstrasse 3, 06466 Gatersleben, Germany
| | - Mohammad Reza Hajirezaei
- Molecular Plant Nutrition, Department of Physiology and Cell Biology, Leibniz Institute of Plant Genetics and Crop Plant Research, Corrensstrasse 3, 06466 Gatersleben, Germany
| | - Sebastien Carpentier
- Proteomics Core Facility, SYBIOMA, KU Leuven, O&N II Herestraat 49, Bus 901, 3000 Leuven, Belgium
- Division of Crop Biotechnics, Department of Biosystems, KU Leuven, Willem de Croylaan 42, Box 2455, 3001 Leuven, Belgium
| | - Nicolaus von Wirén
- Molecular Plant Nutrition, Department of Physiology and Cell Biology, Leibniz Institute of Plant Genetics and Crop Plant Research, Corrensstrasse 3, 06466 Gatersleben, Germany
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Hayat F, Ahmed MA, Zarebanadkouki M, Javaux M, Cai G, Carminati A. Transpiration Reduction in Maize ( Zea mays L) in Response to Soil Drying. FRONTIERS IN PLANT SCIENCE 2020; 10:1695. [PMID: 32038676 PMCID: PMC6989490 DOI: 10.3389/fpls.2019.01695] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/14/2019] [Accepted: 12/02/2019] [Indexed: 05/24/2023]
Abstract
The relationship between leaf water potential, soil water potential, and transpiration depends on soil and plant hydraulics and stomata regulation. Recent concepts of stomatal response to soil drying relate stomatal regulation to plant hydraulics, neglecting the loss of soil hydraulic conductance around the roots. Our objective was to measure the effect of soil drying on the soil-plant hydraulic conductance of maize and to test whether stomatal regulation avoids a loss of soil-plant hydraulic conductance in drying soils. We combined a root pressure chamber, in which the soil-root system is pressurized to maintain the leaf xylem at atmospheric pressure, with sap flow sensors to measure transpiration rate. The method provides accurate and high temporal resolution measurements of the relationship between transpiration rate and xylem leaf water potential. A simple soil-plant hydraulic model describing the flow of water across the soil, root, and xylem was used to simulate the relationship between leaf water potential and transpiration rate. The experiments were carried out with 5-week-old maize grown in cylinders of 9 cm diameter and 30 cm height filled with silty soil. The measurements were performed at four different soil water contents (WC). The results showed that the relationship between transpiration and leaf water potential was linear in wet soils, but as the soil dried, the xylem tension increased, and nonlinearities were observed at high transpiration rates. Nonlinearity in the relationship between transpiration and leaf water potential indicated a decrease in the soil-plant hydraulic conductance, which was explained by the loss of hydraulic conductivity around the roots. The hydraulic model well reproduced the observed leaf water potential. Parallel experiments performed with plants not being pressurized showed that plants closed stomata when the soil-plant hydraulic conductance decreased, maintaining the linearity between leaf water potential and transpiration rate. We conclude that stomata closure during soil drying is caused by the loss of soil hydraulic conductivity in a predictable way.
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Affiliation(s)
- Faisal Hayat
- Chair of Soil Physics, University of Bayreuth, Bayreuth, Germany
| | - Mutez Ali Ahmed
- Chair of Soil Physics, University of Bayreuth, Bayreuth, Germany
- Division of Soil Hydrology, University of Göttingen, Göttingen, Germany
| | | | - Mathieu Javaux
- Earth and Life Institute-Environmental Sciences, Universite Catholique de Louvain, Louvain la Neuve, Belgium
- Agrosphere (IBG-3), Forschungszentrum Juelich GmbH, Juelich, Germany
| | - Gaochao Cai
- Chair of Soil Physics, University of Bayreuth, Bayreuth, Germany
- Division of Soil Hydrology, University of Göttingen, Göttingen, Germany
| | - Andrea Carminati
- Chair of Soil Physics, University of Bayreuth, Bayreuth, Germany
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Agapit C, Gigon A, Girin T, Leitao L, Blouin M. Split-root system optimization based on the survival, growth and development of the model Poaceae Brachypodium distachyon. PHYSIOLOGIA PLANTARUM 2020; 168:227-236. [PMID: 30950064 DOI: 10.1111/ppl.12971] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/24/2018] [Revised: 03/21/2019] [Accepted: 03/29/2019] [Indexed: 05/09/2023]
Abstract
Split-root system has been developed to better understand plant response to environmental factors, by exposing two separate parts of a single root system to heterogeneous situations. Surprisingly, there is no study attempting to maximize plant survival, growth and root system structure through a statistically sound comparison of different experimental protocols. Here, we aim at optimizing split-root systems on the model plant for Poaceae and cereals Brachypodium distachyon in terms of plant survival, number of roots and their equal distribution between the two compartments. We tested the effect of hydroponic or soil as growing media, with or without change of media at the transplantation step. The partial or total cutting of roots and/or shoots was also tested in different treatments as it could have an influence on plant access to energy and water and consequently on survival, growth and root development. Growing plants in soil before and after transplantation in split-root system was the best condition to get the highest survival rate, number of coleoptile node axile roots and growth. Cutting the whole root system was the best option to have a high root biomass and length at the end of the experiment. However, cutting shoots was detrimental for plant growth, especially in terms of root biomass production. In well-watered conditions, a plant submitted to a transfer in a split-root system is thus mainly lacking energy to produce new roots thanks to photosynthesis or adaptive autophagy, not water or nutrients.
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Affiliation(s)
- Corinne Agapit
- Institute of Ecology and Environmental Sciences of Paris (UMR 7618), UPEC, Créteil, France
| | - Agnès Gigon
- Institute of Ecology and Environmental Sciences of Paris (UMR 7618), UPEC, Créteil, France
| | - Thomas Girin
- Institut Jean-Pierre Bourgin, INRA, AgroParisTech, CNRS, Université Paris-Saclay, 78000 Versailles, France
| | - Luis Leitao
- Institute of Ecology and Environmental Sciences of Paris (UMR 7618), UPEC, Créteil, France
| | - Manuel Blouin
- Agroécologie, AgroSup Dijon CNRS, INRA, Université Bourgogne Franche-Comté, Dijon, France
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Wasson AP, Nagel KA, Tracy S, Watt M. Beyond Digging: Noninvasive Root and Rhizosphere Phenotyping. TRENDS IN PLANT SCIENCE 2020; 25:119-120. [PMID: 31791653 DOI: 10.1016/j.tplants.2019.10.011] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/10/2019] [Accepted: 10/28/2019] [Indexed: 05/24/2023]
Affiliation(s)
- Anton P Wasson
- Commonwealth Scientific and Industrial Research Organization (CSIRO) Agriculture and Food, Canberra, ACT 2601, Australia
| | - Kerstin A Nagel
- Institute for Bio- and Geosciences (IBG-2), Plant Sciences, Forschungszentrum Juelich GmbH, 52425 Juelich, Germany
| | - Saoirse Tracy
- University College Dublin (UCD) School of Agriculture and Food Science, UCD, Dublin 4, Ireland
| | - Michelle Watt
- Institute for Bio- and Geosciences (IBG-2), Plant Sciences, Forschungszentrum Juelich GmbH, 52425 Juelich, Germany.
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Rosales MA, Maurel C, Nacry P. Abscisic Acid Coordinates Dose-Dependent Developmental and Hydraulic Responses of Roots to Water Deficit. PLANT PHYSIOLOGY 2019; 180:2198-2211. [PMID: 31164395 PMCID: PMC6670111 DOI: 10.1104/pp.18.01546] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/12/2018] [Accepted: 05/14/2019] [Indexed: 05/04/2023]
Abstract
Root water uptake is influenced by root system architecture, which is determined by root growth and branching and the hydraulics of root cells and tissues. The phytohormone abscisic acid (ABA) plays a major role in the adaptation of plants to water deficit (WD). Here we addressed at the whole-root level in Arabidopsis (Arabidopsis thaliana) the regulatory role of ABA in mechanisms that determine root hydraulic architecture. Root system architecture and root hydraulic conductivity (Lpr) were analyzed in hydroponically grown plants subjected to varying degrees of WD induced by various polyethylene glycol (PEG) concentrations. The majority of root traits investigated, including first- and second-order lateral root production and elongation and whole-root hydraulics, had a bell-shaped dependency on WD, displaying stimulation under mild WD conditions (25 g PEG L-1) and repression under more severe conditions. These traits also showed a bell-shaped dependency on exogenous ABA, and their regulation by WD was attenuated in genotypes altered in ABA biosynthesis and response. Thus, we propose that ABA acts as a coordinator and an integrator of most root responses to mild and moderate WD, whereas responses to strong WD (150 g PEG L-1) are largely ABA independent. We also found that roots exhibit different growth responses to both WD and ABA depending on their rank and age. Taken together, our results give further insights into the coordinated water acquisition strategies of roots deployed in relation to WD intensity.
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Affiliation(s)
- Miguel A Rosales
- BPMP, Université de Montpellier, CNRS, INRA, SupAgro, 2 place P. Viala F34060 Montpellier, France
| | - Christophe Maurel
- BPMP, Université de Montpellier, CNRS, INRA, SupAgro, 2 place P. Viala F34060 Montpellier, France
| | - Philippe Nacry
- BPMP, Université de Montpellier, CNRS, INRA, SupAgro, 2 place P. Viala F34060 Montpellier, France
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Scharwies JD, Dinneny JR. Water transport, perception, and response in plants. JOURNAL OF PLANT RESEARCH 2019; 132:311-324. [PMID: 30747327 DOI: 10.1007/s10265-019-01089-8] [Citation(s) in RCA: 48] [Impact Index Per Article: 9.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/12/2018] [Accepted: 01/16/2019] [Indexed: 05/09/2023]
Abstract
Sufficient water availability in the environment is critical for plant survival. Perception of water by plants is necessary to balance water uptake and water loss and to control plant growth. Plant physiology and soil science research have contributed greatly to our understanding of how water moves through soil, is taken up by roots, and moves to leaves where it is lost to the atmosphere by transpiration. Water uptake from the soil is affected by soil texture itself and soil water content. Hydraulic resistances for water flow through soil can be a major limitation for plant water uptake. Changes in water supply and water loss affect water potential gradients inside plants. Likewise, growth creates water potential gradients. It is known that plants respond to changes in these gradients. Water flow and loss are controlled through stomata and regulation of hydraulic conductance via aquaporins. When water availability declines, water loss is limited through stomatal closure and by adjusting hydraulic conductance to maintain cell turgor. Plants also adapt to changes in water supply by growing their roots towards water and through refinements to their root system architecture. Mechanosensitive ion channels, aquaporins, proteins that sense the cell wall and cell membrane environment, and proteins that change conformation in response to osmotic or turgor changes could serve as putative sensors. Future research is required to better understand processes in the rhizosphere during soil drying and how plants respond to spatial differences in water availability. It remains to be investigated how changes in water availability and water loss affect different tissues and cells in plants and how these biophysical signals are translated into chemical signals that feed into signaling pathways like abscisic acid response or organ development.
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Affiliation(s)
- Johannes Daniel Scharwies
- Department of Plant Biology, Carnegie Institution for Science, 260 Panama Street, Stanford, CA, 94305, USA
- Department of Biology, Stanford University, 371 Serra Mall, Stanford, CA, 94305, USA
| | - José R Dinneny
- Department of Plant Biology, Carnegie Institution for Science, 260 Panama Street, Stanford, CA, 94305, USA.
- Department of Biology, Stanford University, 371 Serra Mall, Stanford, CA, 94305, USA.
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Passot S, Couvreur V, Meunier F, Draye X, Javaux M, Leitner D, Pagès L, Schnepf A, Vanderborght J, Lobet G. Connecting the dots between computational tools to analyse soil-root water relations. JOURNAL OF EXPERIMENTAL BOTANY 2019; 70:2345-2357. [PMID: 30329081 DOI: 10.1093/jxb/ery361] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/07/2018] [Accepted: 10/10/2018] [Indexed: 05/20/2023]
Abstract
In recent years, many computational tools, such as image analysis, data management, process-based simulation, and upscaling tools, have been developed to help quantify and understand water flow in the soil-root system, at multiple scales (tissue, organ, plant, and population). Several of these tools work together or at least are compatible. However, for the uninformed researcher, they might seem disconnected, forming an unclear and disorganized succession of tools. In this article, we show how different studies can be further developed by connecting them to analyse soil-root water relations in a comprehensive and structured network. This 'explicit network of soil-root computational tools' informs readers about existing tools and helps them understand how their data (past and future) might fit within the network. We also demonstrate the novel possibilities of scale-consistent parameterizations made possible by the network with a set of case studies from the literature. Finally, we discuss existing gaps in the network and how we can move forward to fill them.
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Affiliation(s)
- Sixtine Passot
- Earth and Life Institute, Université catholique de Louvain, Louvain-la-Neuve, Belgium
| | - Valentin Couvreur
- Earth and Life Institute, Université catholique de Louvain, Louvain-la-Neuve, Belgium
| | - Félicien Meunier
- Earth and Life Institute, Université catholique de Louvain, Louvain-la-Neuve, Belgium
- Computational and Applied Vegetation Ecology lab, Ghent University, Gent, Belgium
- Department of Earth and Environment, Boston University, Boston, MA, USA
| | - Xavier Draye
- Earth and Life Institute, Université catholique de Louvain, Louvain-la-Neuve, Belgium
| | - Mathieu Javaux
- Earth and Life Institute, Université catholique de Louvain, Louvain-la-Neuve, Belgium
- Agrosphere, IBG3, Forschungszentrum Jülich, GmbH Jülich, Germany
| | | | | | - Andrea Schnepf
- Agrosphere, IBG3, Forschungszentrum Jülich, GmbH Jülich, Germany
| | - Jan Vanderborght
- Agrosphere, IBG3, Forschungszentrum Jülich, GmbH Jülich, Germany
| | - Guillaume Lobet
- Earth and Life Institute, Université catholique de Louvain, Louvain-la-Neuve, Belgium
- Agrosphere, IBG3, Forschungszentrum Jülich, GmbH Jülich, Germany
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Yu P, Hochholdinger F, Li C. Plasticity of Lateral Root Branching in Maize. FRONTIERS IN PLANT SCIENCE 2019; 10:363. [PMID: 30984221 PMCID: PMC6449698 DOI: 10.3389/fpls.2019.00363] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/28/2018] [Accepted: 03/08/2019] [Indexed: 05/11/2023]
Abstract
Extensively branched root systems can efficiently capture soil resources by increasing their absorbing surface in soil. Lateral roots are the roots formed from pericycle cells of other roots that can be of any type. As a consequence, lateral roots provide a higher surface to volume ratio and are important for water and nutrients acquisition. Discoveries from recent studies have started to shed light on how plant root systems respond to environmental changes in order to improve capture of soil resources. In this Mini Review, we will mainly focus on the spatial distribution of lateral roots of maize and their developmental plasticity in response to the availability of water and nutrients.
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Affiliation(s)
- Peng Yu
- Crop Functional Genomics, Institute of Crop Science and Resource Conservation (INRES), University of Bonn, Bonn, Germany
| | - Frank Hochholdinger
- Crop Functional Genomics, Institute of Crop Science and Resource Conservation (INRES), University of Bonn, Bonn, Germany
| | - Chunjian Li
- Department of Plant Nutrition, College of Resources and Environmental Science, China Agricultural University, Beijing, China
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