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Lee ZL, Siew SKH, Yu J. Intrinsic functional connectivity mediates the effect of personality traits on depressive symptoms. PLoS One 2024; 19:e0300462. [PMID: 38985695 PMCID: PMC11236141 DOI: 10.1371/journal.pone.0300462] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/15/2023] [Accepted: 02/27/2024] [Indexed: 07/12/2024] Open
Abstract
BACKGROUND Personality traits have been proposed as risk factors for depressive symptoms. However, the neural mechanism behind these relationships is unclear. This study examined the possible mediating effect of resting-state functional connectivity networks on these relationships. METHODS Data from 153 healthy Germans were obtained from the MPI-Leipzig Mind-Brain-Body: Neuroanatomy & Connectivity Protocol database. Network-based statistics were used to identify significant functional connectivity networks that were positively and negatively associated with the personality traits of neuroticism, conscientiousness, and extraversion, with and without demographical covariates. Mediation analyses were performed for each personality trait and depressive symptoms with the significant positive and negative network strengths of the respective personality traits as mediators. RESULTS Neuroticism, conscientiousness, and extraversion were significantly correlated with depressive symptoms. Network-based statistics identified patterns of functional connectivity that were significantly associated with neuroticism and conscientiousness. After controlling for demographical covariates, significant conscientiousness-associated and extraversion-associated networks emerged. Mediation analysis concluded that only the neuroticism-positive network mediated the effect of neuroticism on depressive symptoms. When age and sex were controlled, the extraversion-positive network completely mediated the effect of extraversion on depressive symptoms. CONCLUSIONS These findings revealed that patterns of intrinsic functional networks predict personality traits and suggest that the relationship between personality traits and depressive symptoms may in part be due to their common patterns of intrinsic functional networks.
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Affiliation(s)
- Zheng Long Lee
- School of Social Sciences, Psychology, Nanyang Technological University, Singapore, Singapore
| | - Savannah Kiah Hui Siew
- School of Social Sciences, Psychology, Nanyang Technological University, Singapore, Singapore
| | - Junhong Yu
- School of Social Sciences, Psychology, Nanyang Technological University, Singapore, Singapore
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2
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Secara MT, Oliver LD, Gallucci J, Dickie EW, Foussias G, Gold J, Malhotra AK, Buchanan RW, Voineskos AN, Hawco C. Heterogeneity in functional connectivity: Dimensional predictors of individual variability during rest and task fMRI in psychosis. Prog Neuropsychopharmacol Biol Psychiatry 2024; 132:110991. [PMID: 38484928 PMCID: PMC11034852 DOI: 10.1016/j.pnpbp.2024.110991] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 10/13/2023] [Revised: 02/27/2024] [Accepted: 03/07/2024] [Indexed: 03/21/2024]
Abstract
BACKGROUND Individuals with schizophrenia spectrum disorders (SSD) often demonstrate cognitive impairments, associated with poor functional outcomes. While neurobiological heterogeneity has posed challenges when examining social cognition in SSD, it provides a unique opportunity to explore brain-behavior relationships. The aim of this study was to investigate the relationship between individual variability in functional connectivity during resting state and the performance of a social task and social and non-social cognition in a large sample of controls and individuals diagnosed with SSD. METHODS Neuroimaging and behavioral data were analyzed for 193 individuals with SSD and 155 controls (total n = 348). Individual variability was quantified through mean correlational distance (MCD) of functional connectivity between participants; MCD was defined as a global 'variability score'. Pairwise correlational distance was calculated as 1 - the correlation coefficient between a given pair of participants, and averaging distance from one participant to all other participants provided the mean correlational distance metric. Hierarchical regressions were performed on variability scores derived from resting state and Empathic Accuracy (EA) task functional connectivity data to determine potential predictors (e.g., age, sex, neurocognitive and social cognitive scores) of individual variability. RESULTS Group comparison between SSD and controls showed greater SSD MCD during rest (p = 0.00038), while no diagnostic differences were observed during task (p = 0.063). Hierarchical regression analyses demonstrated the persistence of a significant diagnostic effect during rest (p = 0.008), contrasting with its non-significance during the task (p = 0.50), after social cognition was added to the model. Notably, social cognition exhibited significance in both resting state and task conditions (both p = 0.01). CONCLUSIONS Diagnostic differences were more prevalent during unconstrained resting scans, whereas the task pushed participants into a more common pattern which better emphasized transdiagnostic differences in cognitive abilities. Focusing on variability may provide new opportunities for interventions targeting specific cognitive impairments to improve functional outcomes.
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Affiliation(s)
- Maria T Secara
- Campbell Family Mental Health Research Institute, Centre for Addiction and Mental Health, Toronto, ON, Canada; Institute of Medical Science, University of Toronto, Toronto, ON, Canada
| | - Lindsay D Oliver
- Campbell Family Mental Health Research Institute, Centre for Addiction and Mental Health, Toronto, ON, Canada; Department of Psychiatry, University of Toronto, Toronto, ON, Canada
| | - Julia Gallucci
- Campbell Family Mental Health Research Institute, Centre for Addiction and Mental Health, Toronto, ON, Canada; Institute of Medical Science, University of Toronto, Toronto, ON, Canada
| | - Erin W Dickie
- Campbell Family Mental Health Research Institute, Centre for Addiction and Mental Health, Toronto, ON, Canada; Department of Psychiatry, University of Toronto, Toronto, ON, Canada
| | - George Foussias
- Campbell Family Mental Health Research Institute, Centre for Addiction and Mental Health, Toronto, ON, Canada; Department of Psychiatry, University of Toronto, Toronto, ON, Canada
| | - James Gold
- Maryland Psychiatric Research Center, Department of Psychiatry, University of Maryland School of Medicine, Baltimore, MD, USA
| | - Anil K Malhotra
- Department of Psychiatry, Division of Research, The Zucker Hillside Hospital Division of Northwell Health, Glen Oaks, NY, USA
| | - Robert W Buchanan
- Maryland Psychiatric Research Center, Department of Psychiatry, University of Maryland School of Medicine, Baltimore, MD, USA
| | - Aristotle N Voineskos
- Campbell Family Mental Health Research Institute, Centre for Addiction and Mental Health, Toronto, ON, Canada; Department of Psychiatry, University of Toronto, Toronto, ON, Canada
| | - Colin Hawco
- Campbell Family Mental Health Research Institute, Centre for Addiction and Mental Health, Toronto, ON, Canada; Department of Psychiatry, University of Toronto, Toronto, ON, Canada.
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3
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Gonzalez-Castillo J, Spurney MA, Lam KC, Gephart IS, Pereira F, Handwerker DA, Kam J, Bandettini PA. In-Scanner Thoughts shape Resting-state Functional Connectivity: how participants "rest" matters. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.06.05.596482. [PMID: 38903114 PMCID: PMC11188111 DOI: 10.1101/2024.06.05.596482] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/22/2024]
Abstract
Resting-state fMRI (rs-fMRI) scans-namely those lacking experimentally-controlled stimuli or cognitive demands-are often used to identify aberrant patterns of functional connectivity (FC) in clinical populations. To minimize interpretational uncertainty, researchers control for across-cohort disparities in age, gender, co-morbidities, and head motion. Yet, studies rarely, if ever, consider the possibility that systematic differences in inner experience (i.e., what subjects think and feel during the scan) may directly affect FC measures. Here we demonstrate that is the case using a rs-fMRI dataset comprising 471 scans annotated with experiential data. Wide-spread significant differences in FC are observed between scans that systematically differ in terms of reported in-scanner experience. Additionally, we show that FC can successfully predict specific aspects of in-scanner experience in a manner similar to how it predicts demographics, cognitive abilities, clinical outcomes and labels. Together, these results highlight the key role of in-scanner experience in shaping rs-fMRI estimates of FC.
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Affiliation(s)
| | - M A Spurney
- Section on Functional Imaging Methods, NIMH, NIH, Bethesda, Maryland, USA
| | - K C Lam
- Machine Learning Team, NIMH, NIH, Bethesda, Maryland, USA
| | - I S Gephart
- Section on Functional Imaging Methods, NIMH, NIH, Bethesda, Maryland, USA
| | - F Pereira
- Machine Learning Team, NIMH, NIH, Bethesda, Maryland, USA
| | - D A Handwerker
- Section on Functional Imaging Methods, NIMH, NIH, Bethesda, Maryland, USA
| | - Jwy Kam
- Department of Psychology, University of Calgary, Calgary, Alberta, Canada
- Hotchkiss Brain Institute, University of Calgary, Calgary, Alberta, Canada
| | - P A Bandettini
- Section on Functional Imaging Methods, NIMH, NIH, Bethesda, Maryland, USA
- Functional MRI Core, NIMH, NIH, Bethesda, Maryland, USA
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4
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Pacheco LB, Feuerriegel D, Jach HK, Robinson E, Duong VN, Bode S, Smillie LD. Disentangling periodic and aperiodic resting EEG correlates of personality. Neuroimage 2024; 293:120628. [PMID: 38688430 DOI: 10.1016/j.neuroimage.2024.120628] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2023] [Revised: 04/26/2024] [Accepted: 04/27/2024] [Indexed: 05/02/2024] Open
Abstract
Previous studies of resting electroencephalography (EEG) correlates of personality traits have conflated periodic and aperiodic sources of EEG signals. Because these are associated with different underlying neural dynamics, disentangling them can avoid measurement confounds and clarify findings. In a large sample (n = 300), we investigated how disentangling these activities impacts findings related to two research programs within personality neuroscience. In Study 1 we examined associations between Extraversion and two putative markers of reward sensitivity-Left Frontal Alpha asymmetry (LFA) and Frontal-Posterior Theta (FPT). In Study 2 we used machine learning to predict personality trait scores from resting EEG. In both studies, power within each EEG frequency bin was quantified as both total power and separate contributions of periodic and aperiodic activity. In Study 1, total power LFA and FPT correlated negatively with Extraversion (r ∼ -0.14), but there was no relation when LFA and FPT were derived only from periodic activity. In Study 2, all Big Five traits could be decoded from periodic power (r ∼ 0.20), and Agreeableness could also be decoded from total power and from aperiodic indices. Taken together, these results show how separation of periodic and aperiodic activity in resting EEG may clarify findings in personality neuroscience. Disentangling these signals allows for more reliable findings relating to periodic EEG markers of personality, and highlights novel aperiodic markers to be explored in future research.
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Affiliation(s)
- Luiza Bonfim Pacheco
- Melbourne School of Psychological Sciences, The University of Melbourne, Victoria, Australia.
| | - Daniel Feuerriegel
- Melbourne School of Psychological Sciences, The University of Melbourne, Victoria, Australia
| | - Hayley K Jach
- Hector Research Institute of Education Sciences and Psychology, University of Tübingen, Tübingen, Germany
| | - Elizabeth Robinson
- Melbourne School of Psychological Sciences, The University of Melbourne, Victoria, Australia; Bolton Clarke Research Institute, Melbourne, Victoria, Australia
| | - Vu Ngoc Duong
- Melbourne School of Psychological Sciences, The University of Melbourne, Victoria, Australia
| | - Stefan Bode
- Melbourne School of Psychological Sciences, The University of Melbourne, Victoria, Australia
| | - Luke D Smillie
- Melbourne School of Psychological Sciences, The University of Melbourne, Victoria, Australia
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5
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Del Mauro G, Wang Z. Cross-subject brain entropy mapping. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.04.05.588307. [PMID: 38645267 PMCID: PMC11030347 DOI: 10.1101/2024.04.05.588307] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 04/23/2024]
Abstract
We present a method to map the regional similarity between resting state fMRI activities of different individuals. The similarity was measured using cross-entropy. Group level patterns were displayed based on the Human Connectome Project Youth data. While we only showed the cross-subject brain entropy (BEN) mapping results in this manuscript, the same concept can be directly extended to map the cross-sessional BEN and the cross-regional cross-subject or subject-session BEN.
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Affiliation(s)
- G Del Mauro
- Department of Diagnostic Radiology and Nuclear Medicine, University of Maryland Schoold of Medicine
| | - Z Wang
- Department of Diagnostic Radiology and Nuclear Medicine, University of Maryland Schoold of Medicine
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6
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Kurkela K, Ritchey M. Intrinsic functional connectivity among memory networks does not predict individual differences in narrative recall. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2023.08.31.555768. [PMID: 38464053 PMCID: PMC10925185 DOI: 10.1101/2023.08.31.555768] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 03/12/2024]
Abstract
Individuals differ greatly in their ability to remember the details of past events, yet little is known about the brain processes that explain such individual differences in a healthy young population. Previous research suggests that episodic memory relies on functional communication among ventral regions of the default mode network ("DMN-C") that are strongly interconnected with the medial temporal lobes. In this study, we investigated whether the intrinsic functional connectivity of the DMN-C subnetwork is related to individual differences in memory ability, examining this relationship across 243 individuals (ages 18-50 years) from the openly available Cambridge Center for Aging and Neuroscience (Cam-CAN) dataset. We first estimated each participant's whole-brain intrinsic functional brain connectivity by combining data from resting-state, movie-watching, and sensorimotor task scans to increase statistical power. We then examined whether intrinsic functional connectivity predicted performance on a narrative recall task. We found no evidence that functional connectivity of the DMN-C, with itself, with other related DMN subnetworks, or with the rest of the brain, was related to narrative recall. Exploratory connectome-based predictive modeling (CBPM) analyses of the entire connectome revealed a whole-brain multivariate pattern that predicted performance, although these changes were largely outside of known memory networks. These results add to emerging evidence suggesting that individual differences in memory cannot be easily explained by brain differences in areas typically associated with episodic memory function.
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Affiliation(s)
- Kyle Kurkela
- Department of Psychology and Neuroscience, Boston College
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7
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Deodato M, Seeber M, Mammeri K, Michel CM, Vuilleumier P. Combined effects of neuroticism and negative emotional context on spontaneous EEG dynamics. Soc Cogn Affect Neurosci 2024; 19:nsae012. [PMID: 38334689 PMCID: PMC10873851 DOI: 10.1093/scan/nsae012] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/12/2022] [Revised: 11/03/2023] [Accepted: 02/08/2024] [Indexed: 02/10/2024] Open
Abstract
Neuroticism is a personality trait with great clinical relevance, defined as a tendency to experience negative affect, sustained self-generated negative thoughts and impaired emotion regulation. Here, we investigated spontaneous brain dynamics in the aftermath of negative emotional events and their links with neuroticism in order to shed light on the prolonged activity of large-scale brain networks associated with the control of affect. We recorded electroencephalography (EEG) from 36 participants who were asked to rest after watching neutral or fearful video clips. Four topographic maps (i.e. microstates classes A, B, C and D) explained the majority of the variance in spontaneous EEG. Participants showed greater presence of microstate D and lesser presence of microstate C following exposure to fearful stimuli, pointing to changes in attention- and introspection-related networks previously associated with these microstates. These emotional effects were more pronounced for participants with low neuroticism. Moreover, neuroticism scores were positively correlated with microstate C and negatively correlated with microstate D, regardless of previous emotional stimulation. Our results reveal distinctive effects of emotional context on resting-state EEG, consistent with a prolonged impact of negative affect on the brain, and suggest a possible link with neuroticism.
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Affiliation(s)
- Michele Deodato
- Laboratory for Behavioral Neurology and Imaging of Cognition, Department of Fundamental Neurosciences, University Medical School of Geneva, Geneva 1202, Switzerland
- Psychology Program, Division of Science, New York University Abu Dhabi, Abu Dhabi, UAE
| | - Martin Seeber
- Functional Brain Mapping Laboratory, Department of Fundamental Neurosciences, Campus Biotech, University of Geneva, Geneva 1201, Switzerland
| | - Kevin Mammeri
- Laboratory for Behavioral Neurology and Imaging of Cognition, Department of Fundamental Neurosciences, University Medical School of Geneva, Geneva 1202, Switzerland
- Swiss Center for Affective Sciences, University of Geneva, Campus Biotech, Geneva 1202, Switzerland
| | - Christoph M Michel
- Functional Brain Mapping Laboratory, Department of Fundamental Neurosciences, Campus Biotech, University of Geneva, Geneva 1201, Switzerland
- Center for Biomedical Imaging (CIBM), Lausanne and Geneva, Lausanne 1015, Switzerland
| | - Patrik Vuilleumier
- Laboratory for Behavioral Neurology and Imaging of Cognition, Department of Fundamental Neurosciences, University Medical School of Geneva, Geneva 1202, Switzerland
- Swiss Center for Affective Sciences, University of Geneva, Campus Biotech, Geneva 1202, Switzerland
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8
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Knodt AR, Elliott ML, Whitman ET, Winn A, Addae A, Ireland D, Poulton R, Ramrakha S, Caspi A, Moffitt TE, Hariri AR. Test-retest reliability and predictive utility of a macroscale principal functional connectivity gradient. Hum Brain Mapp 2023; 44:6399-6417. [PMID: 37851700 PMCID: PMC10681655 DOI: 10.1002/hbm.26517] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/12/2023] [Revised: 09/23/2023] [Accepted: 09/30/2023] [Indexed: 10/20/2023] Open
Abstract
Mapping individual differences in brain function has been hampered by poor reliability as well as limited interpretability. Leveraging patterns of brain-wide functional connectivity (FC) offers some promise in this endeavor. In particular, a macroscale principal FC gradient that recapitulates a hierarchical organization spanning molecular, cellular, and circuit level features along a sensory-to-association cortical axis has emerged as both a parsimonious and interpretable measure of individual differences in behavior. However, the measurement reliabilities of this FC gradient have not been fully evaluated. Here, we assess the reliabilities of both global and regional principal FC gradient measures using test-retest data from the young adult Human Connectome Project (HCP-YA) and the Dunedin Study. Analyses revealed that the reliabilities of principal FC gradient measures were (1) consistently higher than those for traditional edge-wise FC measures, (2) higher for FC measures derived from general FC (GFC) in comparison with resting-state FC, and (3) higher for longer scan lengths. We additionally examined the relative utility of these principal FC gradient measures in predicting cognition and aging in both datasets as well as the HCP-aging dataset. These analyses revealed that regional FC gradient measures and global gradient range were significantly associated with aging in all three datasets, and moderately associated with cognition in the HCP-YA and Dunedin Study datasets, reflecting contractions and expansions of the cortical hierarchy, respectively. Collectively, these results demonstrate that measures of the principal FC gradient, especially derived using GFC, effectively capture a reliable feature of the human brain subject to interpretable and biologically meaningful individual variation, offering some advantages over traditional edge-wise FC measures in the search for brain-behavior associations.
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Affiliation(s)
- Annchen R. Knodt
- Department of Psychology and NeuroscienceDuke UniversityDurhamNorth CarolinaUSA
| | - Maxwell L. Elliott
- Department of Psychology, Center for Brain ScienceHarvard UniversityCambridgeMassachusettsUSA
| | - Ethan T. Whitman
- Department of Psychology and NeuroscienceDuke UniversityDurhamNorth CarolinaUSA
| | - Alex Winn
- Department of Psychology and NeuroscienceDuke UniversityDurhamNorth CarolinaUSA
| | - Angela Addae
- Department of Psychology and NeuroscienceDuke UniversityDurhamNorth CarolinaUSA
| | - David Ireland
- Dunedin Multidisciplinary Health and Development Research Unit, Department of PsychologyUniversity of OtagoDunedinNew Zealand
| | - Richie Poulton
- Dunedin Multidisciplinary Health and Development Research Unit, Department of PsychologyUniversity of OtagoDunedinNew Zealand
| | - Sandhya Ramrakha
- Dunedin Multidisciplinary Health and Development Research Unit, Department of PsychologyUniversity of OtagoDunedinNew Zealand
| | - Avshalom Caspi
- Department of Psychology and NeuroscienceDuke UniversityDurhamNorth CarolinaUSA
- Department of Psychiatry and Behavioral SciencesDuke UniversityDurhamNorth CarolinaUSA
- Institute of Psychiatry, Psychology, and NeuroscienceKing's College LondonLondonUK
| | - Terrie E. Moffitt
- Department of Psychology and NeuroscienceDuke UniversityDurhamNorth CarolinaUSA
- Department of Psychiatry and Behavioral SciencesDuke UniversityDurhamNorth CarolinaUSA
- Institute of Psychiatry, Psychology, and NeuroscienceKing's College LondonLondonUK
| | - Ahmad R. Hariri
- Department of Psychology and NeuroscienceDuke UniversityDurhamNorth CarolinaUSA
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9
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Chen X, Dong D, Zhou F, Gao X, Liu Y, Wang J, Qin J, Tian Y, Xiao M, Xu X, Li W, Qiu J, Feng T, He Q, Lei X, Chen H. Connectome-based prediction of eating disorder-associated symptomatology. Psychol Med 2023; 53:5786-5799. [PMID: 36177890 DOI: 10.1017/s0033291722003026] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Abstract
BACKGROUND Despite increasing knowledge on the neuroimaging patterns of eating disorder (ED) symptoms in non-clinical populations, studies using whole-brain machine learning to identify connectome-based neuromarkers of ED symptomatology are absent. This study examined the association of connectivity within and between large-scale functional networks with specific symptomatic behaviors and cognitions using connectome-based predictive modeling (CPM). METHODS CPM with ten-fold cross-validation was carried out to probe functional networks that were predictive of ED-associated symptomatology, including body image concerns, binge eating, and compensatory behaviors, within the discovery sample of 660 participants. The predictive ability of the identified networks was validated using an independent sample of 821 participants. RESULTS The connectivity predictive of body image concerns was identified within and between networks implicated in cognitive control (frontoparietal and medial frontal), reward sensitivity (subcortical), and visual perception (visual). Crucially, the set of connections in the positive network related to body image concerns identified in one sample was generalized to predict body image concerns in an independent sample, suggesting the replicability of this effect. CONCLUSIONS These findings point to the feasibility of using the functional connectome to predict ED symptomatology in the general population and provide the first evidence that functional interplay among distributed networks predicts body shape/weight concerns.
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Affiliation(s)
- Ximei Chen
- Key Laboratory of Cognition and Personality, Ministry of Education, Faculty of Psychology, Southwest University, Chongqing, China
| | - Debo Dong
- Key Laboratory of Cognition and Personality, Ministry of Education, Faculty of Psychology, Southwest University, Chongqing, China
| | - Feng Zhou
- Key Laboratory of Cognition and Personality, Ministry of Education, Faculty of Psychology, Southwest University, Chongqing, China
| | - Xiao Gao
- Key Laboratory of Cognition and Personality, Ministry of Education, Faculty of Psychology, Southwest University, Chongqing, China
| | - Yong Liu
- Key Laboratory of Cognition and Personality, Ministry of Education, Faculty of Psychology, Southwest University, Chongqing, China
| | - Junjie Wang
- Key Laboratory of Cognition and Personality, Ministry of Education, Faculty of Psychology, Southwest University, Chongqing, China
| | - Jingmin Qin
- Key Laboratory of Cognition and Personality, Ministry of Education, Faculty of Psychology, Southwest University, Chongqing, China
| | - Yun Tian
- Key Laboratory of Cognition and Personality, Ministry of Education, Faculty of Psychology, Southwest University, Chongqing, China
| | - Mingyue Xiao
- Key Laboratory of Cognition and Personality, Ministry of Education, Faculty of Psychology, Southwest University, Chongqing, China
| | - Xiaofei Xu
- School of Computing Technologies, RMIT University, Melbourne, Australia
| | - Wei Li
- Key Laboratory of Cognition and Personality, Ministry of Education, Faculty of Psychology, Southwest University, Chongqing, China
| | - Jiang Qiu
- Key Laboratory of Cognition and Personality, Ministry of Education, Faculty of Psychology, Southwest University, Chongqing, China
- Southwest University Branch, Collaborative Innovation Center of Assessment Toward Basic Education Quality at Beijing Normal University, Chongqing, China
| | - Tingyong Feng
- Key Laboratory of Cognition and Personality, Ministry of Education, Faculty of Psychology, Southwest University, Chongqing, China
- Research Center of Psychology and Social Development, Faculty of Psychology, Southwest University, Chongqing, China
| | - Qinghua He
- Key Laboratory of Cognition and Personality, Ministry of Education, Faculty of Psychology, Southwest University, Chongqing, China
- Southwest University Branch, Collaborative Innovation Center of Assessment Toward Basic Education Quality at Beijing Normal University, Chongqing, China
| | - Xu Lei
- Key Laboratory of Cognition and Personality, Ministry of Education, Faculty of Psychology, Southwest University, Chongqing, China
- Sleep and NeuroImaging Center, Faculty of Psychology, Southwest University, Chongqing, China
| | - Hong Chen
- Key Laboratory of Cognition and Personality, Ministry of Education, Faculty of Psychology, Southwest University, Chongqing, China
- Research Center of Psychology and Social Development, Faculty of Psychology, Southwest University, Chongqing, China
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10
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Rabini G, Pierotti E, Meli C, Dodich A, Papagno C, Turella L. Connectome-based fingerprint of motor impairment is stable along the course of Parkinson's disease. Cereb Cortex 2023; 33:9896-9907. [PMID: 37455441 DOI: 10.1093/cercor/bhad252] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/21/2023] [Revised: 06/21/2023] [Accepted: 06/22/2023] [Indexed: 07/18/2023] Open
Abstract
Functional alterations in brain connectivity have previously been described in Parkinson's disease, but it is not clear whether individual differences in connectivity profiles might be also linked to severity of motor-symptom manifestation. Here we investigated the relevance of individual functional connectivity patterns measured with resting-state fMRI with respect to motor-symptom severity in Parkinson's disease, through a whole-brain, data-driven approach (connectome-based predictive modeling). Neuroimaging and clinical data of Parkinson's disease patients from the Parkinson's Progression Markers Initiative were derived at baseline (session 1, n = 81) and at follow-up (session 2, n = 53). Connectome-based predictive modeling protocol was implemented to predict levels of motor impairment from individual connectivity profiles. The resulting predictive model comprised a network mainly involving functional connections between regions located in the cerebellum, and in the motor and frontoparietal networks. The predictive power of the model was stable along disease progression, as the connectivity within the same network could predict levels of motor impairment, even at a later stage of the disease. Finally, connectivity profiles within this network could be identified at the individual level, suggesting the presence of individual fingerprints within resting-state fMRI connectivity associated with motor manifestations in Parkinson's disease.
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Affiliation(s)
- Giuseppe Rabini
- Centre for Mind/Brain Sciences, University of Trento, Trento, 38068 Rovereto, Italy
| | - Enrica Pierotti
- Centre for Mind/Brain Sciences, University of Trento, Trento, 38068 Rovereto, Italy
| | - Claudia Meli
- Centre for Mind/Brain Sciences, University of Trento, Trento, 38068 Rovereto, Italy
| | - Alessandra Dodich
- Centre for Mind/Brain Sciences, University of Trento, Trento, 38068 Rovereto, Italy
| | - Costanza Papagno
- Centre for Mind/Brain Sciences, University of Trento, Trento, 38068 Rovereto, Italy
| | - Luca Turella
- Centre for Mind/Brain Sciences, University of Trento, Trento, 38068 Rovereto, Italy
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11
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Gonzalez-Castillo J, Fernandez IS, Lam KC, Handwerker DA, Pereira F, Bandettini PA. Manifold learning for fMRI time-varying functional connectivity. Front Hum Neurosci 2023; 17:1134012. [PMID: 37497043 PMCID: PMC10366614 DOI: 10.3389/fnhum.2023.1134012] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/29/2022] [Accepted: 06/21/2023] [Indexed: 07/28/2023] Open
Abstract
Whole-brain functional connectivity (FC) measured with functional MRI (fMRI) evolves over time in meaningful ways at temporal scales going from years (e.g., development) to seconds [e.g., within-scan time-varying FC (tvFC)]. Yet, our ability to explore tvFC is severely constrained by its large dimensionality (several thousands). To overcome this difficulty, researchers often seek to generate low dimensional representations (e.g., 2D and 3D scatter plots) hoping those will retain important aspects of the data (e.g., relationships to behavior and disease progression). Limited prior empirical work suggests that manifold learning techniques (MLTs)-namely those seeking to infer a low dimensional non-linear surface (i.e., the manifold) where most of the data lies-are good candidates for accomplishing this task. Here we explore this possibility in detail. First, we discuss why one should expect tvFC data to lie on a low dimensional manifold. Second, we estimate what is the intrinsic dimension (ID; i.e., minimum number of latent dimensions) of tvFC data manifolds. Third, we describe the inner workings of three state-of-the-art MLTs: Laplacian Eigenmaps (LEs), T-distributed Stochastic Neighbor Embedding (T-SNE), and Uniform Manifold Approximation and Projection (UMAP). For each method, we empirically evaluate its ability to generate neuro-biologically meaningful representations of tvFC data, as well as their robustness against hyper-parameter selection. Our results show that tvFC data has an ID that ranges between 4 and 26, and that ID varies significantly between rest and task states. We also show how all three methods can effectively capture subject identity and task being performed: UMAP and T-SNE can capture these two levels of detail concurrently, but LE could only capture one at a time. We observed substantial variability in embedding quality across MLTs, and within-MLT as a function of hyper-parameter selection. To help alleviate this issue, we provide heuristics that can inform future studies. Finally, we also demonstrate the importance of feature normalization when combining data across subjects and the role that temporal autocorrelation plays in the application of MLTs to tvFC data. Overall, we conclude that while MLTs can be useful to generate summary views of labeled tvFC data, their application to unlabeled data such as resting-state remains challenging.
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Affiliation(s)
- Javier Gonzalez-Castillo
- Section on Functional Imaging Methods, National Institute of Mental Health, Bethesda, MD, United States
| | - Isabel S. Fernandez
- Section on Functional Imaging Methods, National Institute of Mental Health, Bethesda, MD, United States
| | - Ka Chun Lam
- Machine Learning Group, National Institute of Mental Health, Bethesda, MD, United States
| | - Daniel A. Handwerker
- Section on Functional Imaging Methods, National Institute of Mental Health, Bethesda, MD, United States
| | - Francisco Pereira
- Machine Learning Group, National Institute of Mental Health, Bethesda, MD, United States
| | - Peter A. Bandettini
- Section on Functional Imaging Methods, National Institute of Mental Health, Bethesda, MD, United States
- Functional Magnetic Resonance Imaging (FMRI) Core, National Institute of Mental Health, Bethesda, MD, United States
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12
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Zwir I, Arnedo J, Mesa A, Del Val C, de Erausquin GA, Cloninger CR. Temperament & Character account for brain functional connectivity at rest: A diathesis-stress model of functional dysregulation in psychosis. Mol Psychiatry 2023; 28:2238-2253. [PMID: 37015979 PMCID: PMC10611583 DOI: 10.1038/s41380-023-02039-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 11/05/2022] [Revised: 03/11/2023] [Accepted: 03/15/2023] [Indexed: 04/06/2023]
Abstract
The human brain's resting-state functional connectivity (rsFC) provides stable trait-like measures of differences in the perceptual, cognitive, emotional, and social functioning of individuals. The rsFC of the prefrontal cortex is hypothesized to mediate a person's rational self-government, as is also measured by personality, so we tested whether its connectivity networks account for vulnerability to psychosis and related personality configurations. Young adults were recruited as outpatients or controls from the same communities around psychiatric clinics. Healthy controls (n = 30) and clinically stable outpatients with bipolar disorder (n = 35) or schizophrenia (n = 27) were diagnosed by structured interviews, and then were assessed with standardized protocols of the Human Connectome Project. Data-driven clustering identified five groups of patients with distinct patterns of rsFC regardless of diagnosis. These groups were distinguished by rsFC networks that regulate specific biopsychosocial aspects of psychosis: sensory hypersensitivity, negative emotional balance, impaired attentional control, avolition, and social mistrust. The rsFc group differences were validated by independent measures of white matter microstructure, personality, and clinical features not used to identify the subjects. We confirmed that each connectivity group was organized by differential collaborative interactions among six prefrontal and eight other automatically-coactivated networks. The temperament and character traits of the members of these groups strongly accounted for the differences in rsFC between groups, indicating that configurations of rsFC are internal representations of personality organization. These representations involve weakly self-regulated emotional drives of fear, irrational desire, and mistrust, which predispose to psychopathology. However, stable outpatients with different diagnoses (bipolar or schizophrenic psychoses) were highly similar in rsFC and personality. This supports a diathesis-stress model in which different complex adaptive systems regulate predisposition (which is similar in stable outpatients despite diagnosis) and stress-induced clinical dysfunction (which differs by diagnosis).
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Affiliation(s)
- Igor Zwir
- Washington University School of Medicine, Department of Psychiatry, St. Louis, MO, USA
- University of Granada, Department of Computer Science, Granada, Spain
- University of Texas, Rio Grande Valley School of Medicine, Institute of Neuroscience, Harlingen, TX, USA
| | - Javier Arnedo
- Washington University School of Medicine, Department of Psychiatry, St. Louis, MO, USA
- University of Granada, Department of Computer Science, Granada, Spain
| | - Alberto Mesa
- University of Granada, Department of Computer Science, Granada, Spain
| | - Coral Del Val
- University of Granada, Department of Computer Science, Granada, Spain
| | - Gabriel A de Erausquin
- University of Texas, Long School of Medicine, Department of Neurology, San Antonio, TX, USA
- Laboratory of Brain Development, Modulation and Repair, Glenn Biggs Institute of Alzheimer's & Neurodegenerative Disorders, San Antonio, TX, USA
| | - C Robert Cloninger
- Washington University School of Medicine, Department of Psychiatry, St. Louis, MO, USA.
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13
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Horien C, Greene AS, Shen X, Fortes D, Brennan-Wydra E, Banarjee C, Foster R, Donthireddy V, Butler M, Powell K, Vernetti A, Mandino F, O’Connor D, Lake EMR, McPartland JC, Volkmar FR, Chun M, Chawarska K, Rosenberg MD, Scheinost D, Constable RT. A generalizable connectome-based marker of in-scan sustained attention in neurodiverse youth. Cereb Cortex 2023; 33:6320-6334. [PMID: 36573438 PMCID: PMC10183743 DOI: 10.1093/cercor/bhac506] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/09/2022] [Revised: 09/15/2022] [Accepted: 09/16/2022] [Indexed: 12/29/2022] Open
Abstract
Difficulty with attention is an important symptom in many conditions in psychiatry, including neurodiverse conditions such as autism. There is a need to better understand the neurobiological correlates of attention and leverage these findings in healthcare settings. Nevertheless, it remains unclear if it is possible to build dimensional predictive models of attentional state in a sample that includes participants with neurodiverse conditions. Here, we use 5 datasets to identify and validate functional connectome-based markers of attention. In dataset 1, we use connectome-based predictive modeling and observe successful prediction of performance on an in-scan sustained attention task in a sample of youth, including participants with a neurodiverse condition. The predictions are not driven by confounds, such as head motion. In dataset 2, we find that the attention network model defined in dataset 1 generalizes to predict in-scan attention in a separate sample of neurotypical participants performing the same attention task. In datasets 3-5, we use connectome-based identification and longitudinal scans to probe the stability of the attention network across months to years in individual participants. Our results help elucidate the brain correlates of attentional state in youth and support the further development of predictive dimensional models of other clinically relevant phenotypes.
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Affiliation(s)
- Corey Horien
- Interdepartmental Neuroscience Program, Yale School of Medicine, New Haven, CT, United States
- MD-PhD Program, Yale School of Medicine, New Haven, CT, United States
| | - Abigail S Greene
- Interdepartmental Neuroscience Program, Yale School of Medicine, New Haven, CT, United States
- MD-PhD Program, Yale School of Medicine, New Haven, CT, United States
| | - Xilin Shen
- Department of Radiology and Biomedical Imaging, Yale School of Medicine, New Haven, CT, United States
| | - Diogo Fortes
- Yale Child Study Center, New Haven, CT, United States
| | | | | | - Rachel Foster
- Yale Child Study Center, New Haven, CT, United States
| | | | | | - Kelly Powell
- Yale Child Study Center, New Haven, CT, United States
| | | | - Francesca Mandino
- Department of Radiology and Biomedical Imaging, Yale School of Medicine, New Haven, CT, United States
| | - David O’Connor
- Department of Biomedical Engineering, Yale University, New Haven, CT, United States
| | - Evelyn M R Lake
- Department of Radiology and Biomedical Imaging, Yale School of Medicine, New Haven, CT, United States
| | - James C McPartland
- Yale Child Study Center, New Haven, CT, United States
- Department of Psychology, Yale University, New Haven, CT, United States
| | - Fred R Volkmar
- Yale Child Study Center, New Haven, CT, United States
- Department of Psychology, Yale University, New Haven, CT, United States
| | - Marvin Chun
- Department of Psychology, Yale University, New Haven, CT, United States
| | - Katarzyna Chawarska
- Yale Child Study Center, New Haven, CT, United States
- Department of Statistics and Data Science, Yale University, New Haven, CT, United States
- Department of Pediatrics, Yale School of Medicine, New Haven, CT, United States
| | - Monica D Rosenberg
- Department of Psychology, University of Chicago, Chicago, IL, United States
- Neuroscience Institute, University of Chicago, Chicago, IL, United States
| | - Dustin Scheinost
- Interdepartmental Neuroscience Program, Yale School of Medicine, New Haven, CT, United States
- Department of Radiology and Biomedical Imaging, Yale School of Medicine, New Haven, CT, United States
- Yale Child Study Center, New Haven, CT, United States
- Department of Statistics and Data Science, Yale University, New Haven, CT, United States
| | - R Todd Constable
- Interdepartmental Neuroscience Program, Yale School of Medicine, New Haven, CT, United States
- Department of Radiology and Biomedical Imaging, Yale School of Medicine, New Haven, CT, United States
- Department of Neurosurgery, Yale School of Medicine, New Haven, CT, United States
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14
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Nie Z, Xie X, Kang L, Wang W, Xu S, Chen M, Yao L, Gong Q, Zhou E, Li M, Wang H, Bu L, Liu Z. A Cross-Sectional Study: Structural and Related Functional Connectivity Changes in the Brain: Stigmata of Adverse Parenting in Patients with Major Depressive Disorder? Brain Sci 2023; 13:brainsci13040694. [PMID: 37190659 DOI: 10.3390/brainsci13040694] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/20/2023] [Revised: 04/17/2023] [Accepted: 04/18/2023] [Indexed: 05/17/2023] Open
Abstract
Background: There is a high correlation between the risk of major depressive disorder (MDD) and adverse childhood experiences (ACEs) such as adverse parenting (AP). While there appears to be an association between ACEs and changes in brain structure and function, there have yet to be multimodal neuroimaging studies of associations between parenting style and brain developmental changes in MDD patients. To explore the effect of AP on brain structure and function. Methods: In this cross-sectional study, 125 MDD outpatients were included in the study and divided into the AP group and the optimal parenting (OP) group. Participants completed self-rating scales to assess depressive severity, symptoms, and their parents' styles. They also completed magnetic resonance imaging within one week of filling out the instruments. The differences between groups of gender, educational level, and medications were analyzed using the chi-squared test and those of age, duration of illness, and scores on scales using the independent samples t-test. Differences in gray matter volume (GMV) and resting-state functional connectivity (RS-FC) were assessed between groups. Results: AP was associated with a significant increase in GMV in the right superior parietal lobule (SPL) and FC between the right SPL and the bilateral medial superior frontal cortex in MDD patients. Limitations: The cross-cultural characteristics of AP will result in the lack of generalizability of the findings. Conclusions: The results support the hypothesis that AP during childhood may imprint the brain and affect depressive symptoms in adulthood. Parents should pay attention to the parenting style and avoid a style that lacks warmth.
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Affiliation(s)
- Zhaowen Nie
- Department of Psychiatry, Renmin Hospital of Wuhan University, Wuhan 430060, China
| | - Xinhui Xie
- Department of Psychiatry, Renmin Hospital of Wuhan University, Wuhan 430060, China
| | - Lijun Kang
- Department of Psychiatry, Renmin Hospital of Wuhan University, Wuhan 430060, China
| | - Wei Wang
- Department of Psychiatry, Renmin Hospital of Wuhan University, Wuhan 430060, China
| | - Shuxian Xu
- Department of Psychiatry, Renmin Hospital of Wuhan University, Wuhan 430060, China
| | - Mianmian Chen
- Department of Psychiatry, Renmin Hospital of Wuhan University, Wuhan 430060, China
| | - Lihua Yao
- Department of Psychiatry, Renmin Hospital of Wuhan University, Wuhan 430060, China
| | - Qian Gong
- Department of Psychiatry, Renmin Hospital of Wuhan University, Wuhan 430060, China
| | - Enqi Zhou
- Department of Psychiatry, Renmin Hospital of Wuhan University, Wuhan 430060, China
| | - Meng Li
- PET/CT/MRI and Molecular Imaging Center, Renmin Hospital of Wuhan University, Wuhan 430060, China
| | - Huiling Wang
- Department of Psychiatry, Renmin Hospital of Wuhan University, Wuhan 430060, China
| | - Lihong Bu
- PET/CT/MRI and Molecular Imaging Center, Renmin Hospital of Wuhan University, Wuhan 430060, China
| | - Zhongchun Liu
- Department of Psychiatry, Renmin Hospital of Wuhan University, Wuhan 430060, China
- Taikang Center for Life and Medical Sciences, Wuhan University, Wuhan 430072, China
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15
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Chen J, Ooi LQR, Tan TWK, Zhang S, Li J, Asplund CL, Eickhoff SB, Bzdok D, Holmes AJ, Yeo BTT. Relationship Between Prediction Accuracy and Feature Importance Reliability: an Empirical and Theoretical Study. Neuroimage 2023; 274:120115. [PMID: 37088322 DOI: 10.1016/j.neuroimage.2023.120115] [Citation(s) in RCA: 7] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/08/2022] [Revised: 03/06/2023] [Accepted: 04/13/2023] [Indexed: 04/25/2023] Open
Abstract
There is significant interest in using neuroimaging data to predict behavior. The predictive models are often interpreted by the computation of feature importance, which quantifies the predictive relevance of an imaging feature. Tian and Zalesky (2021) suggest that feature importance estimates exhibit low split-half reliability, as well as a trade-off between prediction accuracy and feature importance reliability across parcellation resolutions. However, it is unclear whether the trade-off between prediction accuracy and feature importance reliability is universal. Here, we demonstrate that, with a sufficient sample size, feature importance (operationalized as Haufe-transformed weights) can achieve fair to excellent split-half reliability. With a sample size of 2600 participants, Haufe-transformed weights achieve average intra-class correlation coefficients of 0.75, 0.57 and 0.53 for cognitive, personality and mental health measures respectively. Haufe-transformed weights are much more reliable than original regression weights and univariate FC-behavior correlations. Original regression weights are not reliable even with 2600 participants. Intriguingly, feature importance reliability is strongly positively correlated with prediction accuracy across phenotypes. Within a particular behavioral domain, there is no clear relationship between prediction performance and feature importance reliability across regression models. Furthermore, we show mathematically that feature importance reliability is necessary, but not sufficient, for low feature importance error. In the case of linear models, lower feature importance error is mathematically related to lower prediction error. Therefore, higher feature importance reliability might yield lower feature importance error and higher prediction accuracy. Finally, we discuss how our theoretical results relate with the reliability of imaging features and behavioral measures. Overall, the current study provides empirical and theoretical insights into the relationship between prediction accuracy and feature importance reliability.
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Affiliation(s)
- Jianzhong Chen
- Centre for Sleep and Cognition, Yong Loo Lin School of Medicine, National University of Singapore, Singapore; Centre for Translational MR Research, Yong Loo Lin School of Medicine, National University of Singapore, Singapore; Department of Electrical and Computer Engineering, National University of Singapore, Singapore; N.1 Institute for Health & Institute for Digital Medicine (WisDM), National University of Singapore, Singapore
| | - Leon Qi Rong Ooi
- Centre for Sleep and Cognition, Yong Loo Lin School of Medicine, National University of Singapore, Singapore; Centre for Translational MR Research, Yong Loo Lin School of Medicine, National University of Singapore, Singapore; Department of Electrical and Computer Engineering, National University of Singapore, Singapore; N.1 Institute for Health & Institute for Digital Medicine (WisDM), National University of Singapore, Singapore; Integrative Sciences and Engineering Programme (ISEP), National University of Singapore
| | - Trevor Wei Kiat Tan
- Centre for Sleep and Cognition, Yong Loo Lin School of Medicine, National University of Singapore, Singapore; Centre for Translational MR Research, Yong Loo Lin School of Medicine, National University of Singapore, Singapore; Department of Electrical and Computer Engineering, National University of Singapore, Singapore; N.1 Institute for Health & Institute for Digital Medicine (WisDM), National University of Singapore, Singapore; Integrative Sciences and Engineering Programme (ISEP), National University of Singapore
| | - Shaoshi Zhang
- Centre for Sleep and Cognition, Yong Loo Lin School of Medicine, National University of Singapore, Singapore; Centre for Translational MR Research, Yong Loo Lin School of Medicine, National University of Singapore, Singapore; Department of Electrical and Computer Engineering, National University of Singapore, Singapore; N.1 Institute for Health & Institute for Digital Medicine (WisDM), National University of Singapore, Singapore; Integrative Sciences and Engineering Programme (ISEP), National University of Singapore
| | - Jingwei Li
- Institute of Neuroscience and Medicine, Brain & Behaviour (INM-7), Research Center Jülich, Jülich, Germany; Institute for Systems Neuroscience, Medical Faculty, Heinrich-Heine University Düsseldorf, Düsseldorf, Germany
| | - Christopher L Asplund
- Centre for Sleep and Cognition, Yong Loo Lin School of Medicine, National University of Singapore, Singapore; Centre for Translational MR Research, Yong Loo Lin School of Medicine, National University of Singapore, Singapore; N.1 Institute for Health & Institute for Digital Medicine (WisDM), National University of Singapore, Singapore; Division of Social Sciences, Yale-NUS College, Singapore; Department of Psychology, National University of Singapore, Singapore; Duke-NUS Medical School, Singapore
| | - Simon B Eickhoff
- Institute of Neuroscience and Medicine, Brain & Behaviour (INM-7), Research Center Jülich, Jülich, Germany; Institute for Systems Neuroscience, Medical Faculty, Heinrich-Heine University Düsseldorf, Düsseldorf, Germany
| | - Danilo Bzdok
- Department of Biomedical Engineering, Montreal Neurological Institute, McGill University, Montreal, Quebec, Canada; Mila - Quebec AI Institute, Montreal, Canada
| | - Avram J Holmes
- Yale University, Departments of Psychology and Psychiatry, New Haven, CT, USA
| | - B T Thomas Yeo
- Centre for Sleep and Cognition, Yong Loo Lin School of Medicine, National University of Singapore, Singapore; Centre for Translational MR Research, Yong Loo Lin School of Medicine, National University of Singapore, Singapore; Department of Electrical and Computer Engineering, National University of Singapore, Singapore; N.1 Institute for Health & Institute for Digital Medicine (WisDM), National University of Singapore, Singapore; Integrative Sciences and Engineering Programme (ISEP), National University of Singapore; Martinos Center for Biomedical Imaging, Massachusetts General Hospital, Charlestown, MA, USA.
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16
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Sankar A, Shen X, Colic L, Goldman DA, Villa LM, Kim JA, Pittman B, Scheinost D, Constable RT, Blumberg HP. Predicting depressed and elevated mood symptomatology in bipolar disorder using brain functional connectomes. Psychol Med 2023; 53:1-10. [PMID: 36891769 PMCID: PMC10491744 DOI: 10.1017/s003329172300003x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 07/14/2022] [Revised: 12/07/2022] [Accepted: 01/03/2023] [Indexed: 03/10/2023]
Abstract
BACKGROUND The study is aimed to identify brain functional connectomes predictive of depressed and elevated mood symptomatology in individuals with bipolar disorder (BD) using the machine learning approach Connectome-based Predictive Modeling (CPM). METHODS Functional magnetic resonance imaging data were obtained from 81 adults with BD while they performed an emotion processing task. CPM with 5000 permutations of leave-one-out cross-validation was applied to identify functional connectomes predictive of depressed and elevated mood symptom scores on the Hamilton Depression and Young Mania rating scales. The predictive ability of the identified connectomes was tested in an independent sample of 43 adults with BD. RESULTS CPM predicted the severity of depressed [concordance between actual and predicted values (r = 0.23, pperm (permutation test) = 0.031) and elevated (r = 0.27, pperm = 0.01) mood. Functional connectivity of left dorsolateral prefrontal cortex and supplementary motor area nodes, with inter- and intra-hemispheric connections to other anterior and posterior cortical, limbic, motor, and cerebellar regions, predicted depressed mood severity. Connectivity of left fusiform and right visual association area nodes with inter- and intra-hemispheric connections to the motor, insular, limbic, and posterior cortices predicted elevated mood severity. These networks were predictive of mood symptomatology in the independent sample (r ⩾ 0.45, p = 0.002). CONCLUSIONS This study identified distributed functional connectomes predictive of depressed and elevated mood severity in BD. Connectomes subserving emotional, cognitive, and psychomotor control predicted depressed mood severity, while those subserving emotional and social perceptual functions predicted elevated mood severity. Identification of these connectome networks may help inform the development of targeted treatments for mood symptoms.
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Affiliation(s)
- Anjali Sankar
- Department of Psychiatry, Yale School of Medicine, New Haven, CT, USA
- Neurobiology Research Unit, Copenhagen University Hospital, Rigshospitalet, Copenhagen, Denmark
| | - Xilin Shen
- Department of Radiology and Biomedical Imaging, Yale School of Medicine, New Haven, CT, USA
| | - Lejla Colic
- Department of Psychiatry, Yale School of Medicine, New Haven, CT, USA
- Department of Psychiatry and Psychotherapy, Jena University Hospital, Jena, Germany
- German Center for Mental Health, Halle-Jena-Magdeburg, Magdeburg, Germany
| | - Danielle A. Goldman
- Department of Psychiatry, Yale School of Medicine, New Haven, CT, USA
- Interdepartmental Neuroscience Program, Yale School of Medicine, New Haven, CT, USA
| | - Luca M. Villa
- Department of Psychiatry, Yale School of Medicine, New Haven, CT, USA
- Department of Psychiatry, University of Oxford, Oxford, UK
| | - Jihoon A. Kim
- Department of Psychiatry, Yale School of Medicine, New Haven, CT, USA
| | - Brian Pittman
- Department of Psychiatry, Yale School of Medicine, New Haven, CT, USA
| | - Dustin Scheinost
- Department of Radiology and Biomedical Imaging, Yale School of Medicine, New Haven, CT, USA
| | - R. Todd Constable
- Department of Radiology and Biomedical Imaging, Yale School of Medicine, New Haven, CT, USA
| | - Hilary P. Blumberg
- Department of Psychiatry, Yale School of Medicine, New Haven, CT, USA
- Department of Radiology and Biomedical Imaging, Yale School of Medicine, New Haven, CT, USA
- Child Study Center, Yale School of Medicine, New Haven, CT, USA
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17
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Cutts SA, Faskowitz J, Betzel RF, Sporns O. Uncovering individual differences in fine-scale dynamics of functional connectivity. Cereb Cortex 2023; 33:2375-2394. [PMID: 35690591 DOI: 10.1093/cercor/bhac214] [Citation(s) in RCA: 6] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/21/2022] [Revised: 05/07/2022] [Accepted: 05/08/2022] [Indexed: 01/01/2023] Open
Abstract
Functional connectivity (FC) profiles contain subject-specific features that are conserved across time and have potential to capture brain-behavior relationships. Most prior work has focused on spatial features (nodes and systems) of these FC fingerprints, computed over entire imaging sessions. We propose a method for temporally filtering FC, which allows selecting specific moments in time while also maintaining the spatial pattern of node-based activity. To this end, we leverage a recently proposed decomposition of FC into edge time series (eTS). We systematically analyze functional magnetic resonance imaging frames to define features that enhance identifiability across multiple fingerprinting metrics, similarity metrics, and data sets. Results show that these metrics characteristically vary with eTS cofluctuation amplitude, similarity of frames within a run, transition velocity, and expression of functional systems. We further show that data-driven optimization of features that maximize fingerprinting metrics isolates multiple spatial patterns of system expression at specific moments in time. Selecting just 10% of the data can yield stronger fingerprints than are obtained from the full data set. Our findings support the idea that FC fingerprints are differentially expressed across time and suggest that multiple distinct fingerprints can be identified when spatial and temporal characteristics are considered simultaneously.
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Affiliation(s)
- Sarah A Cutts
- Department of Psychological and Brain Sciences, Indiana University, Bloomington, IN 47405, United States.,Program in Neuroscience, Indiana University, Bloomington, IN 47405, United States
| | - Joshua Faskowitz
- Department of Psychological and Brain Sciences, Indiana University, Bloomington, IN 47405, United States.,Program in Neuroscience, Indiana University, Bloomington, IN 47405, United States
| | - Richard F Betzel
- Department of Psychological and Brain Sciences, Indiana University, Bloomington, IN 47405, United States.,Program in Neuroscience, Indiana University, Bloomington, IN 47405, United States.,Network Science Institute, Indiana University, Bloomington, IN 47408, United States.,Cognitive Science Program, Indiana University, Bloomington, IN 47405, United States
| | - Olaf Sporns
- Department of Psychological and Brain Sciences, Indiana University, Bloomington, IN 47405, United States.,Program in Neuroscience, Indiana University, Bloomington, IN 47405, United States.,Network Science Institute, Indiana University, Bloomington, IN 47408, United States.,Cognitive Science Program, Indiana University, Bloomington, IN 47405, United States
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18
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Wu X, Yang Q, Xu C, Huo H, Seger CA, Peng Z, Chen Q. Connectome-based predictive modeling of compulsion in obsessive-compulsive disorder. Cereb Cortex 2023; 33:1412-1425. [PMID: 35443038 DOI: 10.1093/cercor/bhac145] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/27/2022] [Revised: 03/22/2022] [Accepted: 03/23/2022] [Indexed: 11/13/2022] Open
Abstract
Compulsion is one of core symptoms of obsessive-compulsive disorder (OCD). Although many studies have investigated the neural mechanism of compulsion, no study has used brain-based measures to predict compulsion. Here, we used connectome-based predictive modeling (CPM) to identify networks that could predict the levels of compulsion based on whole-brain functional connectivity in 57 OCD patients. We then applied a computational lesion version of CPM to examine the importance of specific brain areas. We also compared the predictive network strength in OCD with unaffected first-degree relatives (UFDR) of patients and healthy controls. CPM successfully predicted individual level of compulsion and identified networks positively (primarily subcortical areas of the striatum and limbic regions of the hippocampus) and negatively (primarily frontoparietal regions) correlated with compulsion. The prediction power of the negative model significantly decreased when simulating lesions to the prefrontal cortex and cerebellum, supporting the importance of these regions for compulsion prediction. We found a similar pattern of network strength in the negative predictive network for OCD patients and their UFDR, demonstrating the potential of CPM to identify vulnerability markers for psychopathology.
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Affiliation(s)
- Xiangshu Wu
- Key Laboratory of Brain, Cognition and Education Sciences, Ministry of Education, 510631, China.,School of Psychology, Center for Studies of Psychological Application, and Guangdong Key Laboratory of Mental Health and Cognitive Science, South China Normal University, Guangzhou 510631, China
| | - Qiong Yang
- Affiliated Brain Hospital of Guangzhou Medical University, 510370 Guangzhou, China
| | - Chuanyong Xu
- Department of Child Psychiatry and Rehabilitation, Institute of Maternity and Child Medical Research, Affiliated Shenzhen Maternity & Child Healthcare Hospital, Southern Medical University, Shenzhen 518047, China
| | - Hangfeng Huo
- Key Laboratory of Brain, Cognition and Education Sciences, Ministry of Education, 510631, China.,School of Psychology, Center for Studies of Psychological Application, and Guangdong Key Laboratory of Mental Health and Cognitive Science, South China Normal University, Guangzhou 510631, China
| | - Carol A Seger
- Key Laboratory of Brain, Cognition and Education Sciences, Ministry of Education, 510631, China.,School of Psychology, Center for Studies of Psychological Application, and Guangdong Key Laboratory of Mental Health and Cognitive Science, South China Normal University, Guangzhou 510631, China.,Department of Psychology, Colorado State University, Fort Collins, CO 80523, United States
| | - Ziwen Peng
- Key Laboratory of Brain, Cognition and Education Sciences, Ministry of Education, 510631, China.,School of Psychology, Center for Studies of Psychological Application, and Guangdong Key Laboratory of Mental Health and Cognitive Science, South China Normal University, Guangzhou 510631, China.,Department of Child Psychiatry, Shenzhen Kangning Hospital, Shenzhen University School of Medicine, Shenzhen 518061, China
| | - Qi Chen
- Key Laboratory of Brain, Cognition and Education Sciences, Ministry of Education, 510631, China.,School of Psychology, Center for Studies of Psychological Application, and Guangdong Key Laboratory of Mental Health and Cognitive Science, South China Normal University, Guangzhou 510631, China
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19
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Anderson AJ, Perone S. Predicting individual differences in behavioral activation and behavioral inhibition from functional networks in the resting EEG. Biol Psychol 2023; 177:108483. [PMID: 36587892 DOI: 10.1016/j.biopsycho.2022.108483] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/11/2022] [Revised: 12/09/2022] [Accepted: 12/28/2022] [Indexed: 12/31/2022]
Abstract
The behavioral activation system (BAS) and behavioral inhibition system (BIS) are thought to underly affective dispositions and self-regulatory processes. The BAS is sensitive to reward and involved in approach behaviors, and the BIS is sensitive to punishment and involved in avoidance behaviors. Trait BAS and BIS relate to distinct behavioral profiles and neural activity, but little is known about how trait BAS and BIS relate to functional networks in EEG. We applied a data-driven method called connectome predictive modeling (CPM) to identify networks relating to trait BAS and BIS and tested whether the strength of those networks predicted trait BAS and BIS in novel subjects using a leave-one-out cross-validation procedure. Adult participants (N = 107) completed a resting state task with eyes closed and eyes open, and trait BAS and BIS were measured via Carver and White's (1994) BIS and BAS scales. We hypothesized distinct positive (more synchronization) and negative (less synchronization) networks would relate to trait BAS and BIS. For eyes closed, we identified two negative networks, one in theta and one in alpha predicted BIS. We identified three positive networks, one in theta and one in beta predicted Fun Seeking and one in theta predicted Drive. For eyes open, negative theta and alpha networks predicted BIS, a positive theta network predicted Fun Seeking, and a negative gamma network predicted mean BAS. Visualization of the networks are presented. Discussion centers on the observed networks and how to advance application of CPM to EEG, including with clinical implications.
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Affiliation(s)
- Alana J Anderson
- Department of Human Development, Washington State University, USA.
| | - Sammy Perone
- Department of Human Development, Washington State University, USA
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20
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Gonzalez-Castillo J, Fernandez I, Lam KC, Handwerker DA, Pereira F, Bandettini PA. Manifold Learning for fMRI time-varying FC. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2023:2023.01.14.523992. [PMID: 36789436 PMCID: PMC9928030 DOI: 10.1101/2023.01.14.523992] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
Abstract
Whole-brain functional connectivity ( FC ) measured with functional MRI (fMRI) evolve over time in meaningful ways at temporal scales going from years (e.g., development) to seconds (e.g., within-scan time-varying FC ( tvFC )). Yet, our ability to explore tvFC is severely constrained by its large dimensionality (several thousands). To overcome this difficulty, researchers seek to generate low dimensional representations (e.g., 2D and 3D scatter plots) expected to retain its most informative aspects (e.g., relationships to behavior, disease progression). Limited prior empirical work suggests that manifold learning techniques ( MLTs )-namely those seeking to infer a low dimensional non-linear surface (i.e., the manifold) where most of the data lies-are good candidates for accomplishing this task. Here we explore this possibility in detail. First, we discuss why one should expect tv FC data to lie on a low dimensional manifold. Second, we estimate what is the intrinsic dimension (i.e., minimum number of latent dimensions; ID ) of tvFC data manifolds. Third, we describe the inner workings of three state-of-the-art MLTs : Laplacian Eigenmaps ( LE ), T-distributed Stochastic Neighbor Embedding ( T-SNE ), and Uniform Manifold Approximation and Projection ( UMAP ). For each method, we empirically evaluate its ability to generate neuro-biologically meaningful representations of tvFC data, as well as their robustness against hyper-parameter selection. Our results show that tvFC data has an ID that ranges between 4 and 26, and that ID varies significantly between rest and task states. We also show how all three methods can effectively capture subject identity and task being performed: UMAP and T-SNE can capture these two levels of detail concurrently, but L E could only capture one at a time. We observed substantial variability in embedding quality across MLTs , and within- MLT as a function of hyper-parameter selection. To help alleviate this issue, we provide heuristics that can inform future studies. Finally, we also demonstrate the importance of feature normalization when combining data across subjects and the role that temporal autocorrelation plays in the application of MLTs to tvFC data. Overall, we conclude that while MLTs can be useful to generate summary views of labeled tvFC data, their application to unlabeled data such as resting-state remains challenging.
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Affiliation(s)
| | - Isabel Fernandez
- Section on Functional Imaging Methods, National Institute of Mental Health, Bethesda, MD
| | - Ka Chun Lam
- Machine Learning Group, National Institute of Mental Health, Bethesda, MD
| | - Daniel A Handwerker
- Section on Functional Imaging Methods, National Institute of Mental Health, Bethesda, MD
| | - Francisco Pereira
- Machine Learning Group, National Institute of Mental Health, Bethesda, MD
| | - Peter A Bandettini
- Section on Functional Imaging Methods, National Institute of Mental Health, Bethesda, MD,Machine Learning Group, National Institute of Mental Health, Bethesda, MD,FMRI Core, National Institute of Mental Health, Bethesda, MD
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21
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Schwarzlose RF, Tillman R, Hoyniak CP, Luby JL, Barch DM. Sensory Over-responsivity: A Feature of Childhood Psychiatric Illness Associated With Altered Functional Connectivity of Sensory Networks. Biol Psychiatry 2023; 93:92-101. [PMID: 36357217 PMCID: PMC10308431 DOI: 10.1016/j.biopsych.2022.09.004] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 04/26/2022] [Revised: 08/20/2022] [Accepted: 09/21/2022] [Indexed: 11/02/2022]
Abstract
BACKGROUND Sensory over-responsivity (SOR) is recognized as a common feature of autism spectrum disorder. However, SOR is also common among typically developing children, in whom it is associated with elevated levels of psychiatric symptoms. The clinical significance and neurocognitive bases of SOR in these children remain poorly understood and actively debated. METHODS This study used linear mixed-effects models to identify psychiatric symptoms and network-level functional connectivity (FC) differences associated with parent-reported SOR in the Adolescent Brain Cognitive Development (ABCD) Study, a large community sample (9 to 12 years of age) (N = 11,210). RESULTS Children with SOR constituted 18% of the overall sample but comprised more than half of the children with internalizing or externalizing scores in the clinical range. Controlling for autistic traits, both mild and severe SOR were associated with greater concurrent symptoms of depression, anxiety, obsessive-compulsive disorder, and attention-deficit/hyperactivity disorder. Controlling for psychiatric symptoms and autistic traits, SOR predicted increased anxiety, attention-deficit/hyperactivity disorder, and prodromal psychosis symptoms 1 year later and was associated with FC differences in brain networks supporting sensory and salience processing in datasets collected 2 years apart. Differences included reduced FC within and between sensorimotor networks, enhanced sensorimotor-salience FC, and altered FC between sensory networks and bilateral hippocampi. CONCLUSIONS SOR is a common, clinically relevant feature of childhood psychiatric illness that provides unique predictive information about risk. It is associated with differences in brain networks that subserve tactile processing, implicating a neural basis for sensory differences in affected children.
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Affiliation(s)
- Rebecca F Schwarzlose
- Department of Psychiatry, Washington University School of Medicine, St. Louis, Missouri.
| | - Rebecca Tillman
- Department of Psychiatry, Washington University School of Medicine, St. Louis, Missouri
| | - Caroline P Hoyniak
- Department of Psychiatry, Washington University School of Medicine, St. Louis, Missouri
| | - Joan L Luby
- Department of Psychiatry, Washington University School of Medicine, St. Louis, Missouri
| | - Deanna M Barch
- Department of Psychiatry, Washington University School of Medicine, St. Louis, Missouri; Department of Psychological and Brain Sciences, Washington University in St. Louis, St. Louis, Missouri
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22
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Ma SS, Zhang JT, Song KR, Zhao R, Fang RH, Wang LB, Yao ST, Hu YF, Jiang XY, Potenza MN, Fang XY. Connectome-based prediction of marital quality in husbands' processing of spousal interactions. Soc Cogn Affect Neurosci 2022; 17:1055-1067. [PMID: 35560211 PMCID: PMC9714425 DOI: 10.1093/scan/nsac034] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/19/2021] [Revised: 04/12/2022] [Accepted: 05/13/2022] [Indexed: 01/12/2023] Open
Abstract
Marital quality may decrease during the early years of marriage. Establishing models predicting individualized marital quality may help develop timely and effective interventions to maintain or improve marital quality. Given that marital interactions have an important impact on marital well-being cross-sectionally and prospectively, neural responses during marital interactions may provide insight into neural bases underlying marital well-being. The current study applies connectome-based predictive modeling, a recently developed machine-learning approach, to functional magnetic resonance imaging (fMRI) data from both partners of 25 early-stage Chinese couples to examine whether an individual's unique pattern of brain functional connectivity (FC) when responding to spousal interactive behaviors can reliably predict their own and their partners' marital quality after 13 months. Results revealed that husbands' FC involving multiple large networks, when responding to their spousal interactive behaviors, significantly predicted their own and their wives' marital quality, and this predictability showed gender specificity. Brain connectivity patterns responding to general emotional stimuli and during the resting state were not significantly predictive. This study demonstrates that husbands' differences in large-scale neural networks during marital interactions may contribute to their variability in marital quality and highlights gender-related differences. The findings lay a foundation for identifying reliable neuroimaging biomarkers for developing interventions for marital quality early in marriages.
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Affiliation(s)
- Shan-Shan Ma
- Institute of Developmental Psychology, Beijing Normal University, Beijing 100875, China
| | - Jin-Tao Zhang
- State Key Laboratory of Cognitive Neuroscience and Learning, Beijing Normal University, Beijing 100875, China
- IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing 100875, China
| | - Kun-Ru Song
- State Key Laboratory of Cognitive Neuroscience and Learning, Beijing Normal University, Beijing 100875, China
- IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing 100875, China
| | - Rui Zhao
- Institute of Developmental Psychology, Beijing Normal University, Beijing 100875, China
| | - Ren-Hui Fang
- Institute of Developmental Psychology, Beijing Normal University, Beijing 100875, China
| | - Luo-Bin Wang
- Institute of Developmental Psychology, Beijing Normal University, Beijing 100875, China
| | - Shu-Ting Yao
- Institute of Developmental Psychology, Beijing Normal University, Beijing 100875, China
| | - Yi-Fan Hu
- Department of Human Development and Family Studies, University of Illinois at Urbana-Champaign, Champaign, IL 61801, USA
| | - Xin-Ying Jiang
- Institute of Developmental Psychology, Beijing Normal University, Beijing 100875, China
| | - Marc N Potenza
- Department of Psychiatry, Yale University School of Medicine, New Haven, CT 06519, USA
- Child Study Center, Yale University School of Medicine, New Haven, CT 06519, USA
- Connecticut Council on Problem Gambling, Wethersfield, CT 06109, USA
- Connecticut Mental Health Center, New Haven, CT 06519, USA
- Department of Neuroscience, Yale University School of Medicine, New Haven, CT 06519, USA
| | - Xiao-Yi Fang
- Correspondence should be addressed to Xiao-Yi Fang, Institute of Developmental Psychology, Beijing Normal University, No. 19, Xinjiekou Wai Street, Haidian District, Beijing 100875, China. E-mail:
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23
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Li Y, Cai H, Li X, Qian Y, Zhang C, Zhu J, Yu Y. Functional connectivity of the central autonomic and default mode networks represent neural correlates and predictors of individual personality. J Neurosci Res 2022; 100:2187-2200. [PMID: 36069656 DOI: 10.1002/jnr.25121] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/09/2022] [Accepted: 08/24/2022] [Indexed: 01/07/2023]
Abstract
There is solid evidence for the prominent involvement of the central autonomic and default mode systems in shaping personality. However, whether functional connectivity of these systems can represent neural correlates and predictors of individual variation in personality traits is largely unknown. Resting-state functional magnetic resonance imaging data of 215 healthy young adults were used to construct the sympathetic (SN), parasympathetic (PN), and default mode (DMN) networks, with intra- and internetwork functional connectivity measured. Personality factors were assessed using the five-factor model. We examined the associations between personality factors and functional network connectivity, followed by performance of personality prediction based on functional connectivity using connectome-based predictive modeling (CPM), a recently developed machine learning approach. All personality factors (neuroticism, extraversion, conscientiousness, and agreeableness) other than openness were significantly correlated with intra- and internetwork functional connectivity of the SN, PN, and DMN. Moreover, the CPM models successfully predicted conscientiousness and agreeableness at the individual level using functional network connectivity. Our findings may expand existing knowledge regarding the neural substrates underlying personality.
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Affiliation(s)
- Yating Li
- Department of Radiology, The First Affiliated Hospital of Anhui Medical University, Hefei, China.,Research Center of Clinical Medical Imaging, Anhui Province, Hefei, China.,Anhui Provincial Institute of Translational Medicine, Hefei, China
| | - Huanhuan Cai
- Department of Radiology, The First Affiliated Hospital of Anhui Medical University, Hefei, China.,Research Center of Clinical Medical Imaging, Anhui Province, Hefei, China.,Anhui Provincial Institute of Translational Medicine, Hefei, China
| | - Xueying Li
- Department of Radiology, The First Affiliated Hospital of Anhui Medical University, Hefei, China.,Research Center of Clinical Medical Imaging, Anhui Province, Hefei, China.,Anhui Provincial Institute of Translational Medicine, Hefei, China
| | - Yinfeng Qian
- Department of Radiology, The First Affiliated Hospital of Anhui Medical University, Hefei, China.,Research Center of Clinical Medical Imaging, Anhui Province, Hefei, China.,Anhui Provincial Institute of Translational Medicine, Hefei, China
| | - Cun Zhang
- Department of Radiology, The First Affiliated Hospital of Anhui Medical University, Hefei, China.,Research Center of Clinical Medical Imaging, Anhui Province, Hefei, China.,Anhui Provincial Institute of Translational Medicine, Hefei, China
| | - Jiajia Zhu
- Department of Radiology, The First Affiliated Hospital of Anhui Medical University, Hefei, China.,Research Center of Clinical Medical Imaging, Anhui Province, Hefei, China.,Anhui Provincial Institute of Translational Medicine, Hefei, China
| | - Yongqiang Yu
- Department of Radiology, The First Affiliated Hospital of Anhui Medical University, Hefei, China.,Research Center of Clinical Medical Imaging, Anhui Province, Hefei, China.,Anhui Provincial Institute of Translational Medicine, Hefei, China
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24
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Chamberlain TA, Rosenberg MD. Propofol selectively modulates functional connectivity signatures of sustained attention during rest and narrative listening. Cereb Cortex 2022; 32:5362-5375. [PMID: 35285485 DOI: 10.1093/cercor/bhac020] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/15/2021] [Revised: 01/06/2022] [Accepted: 01/08/2022] [Indexed: 12/27/2022] Open
Abstract
Sustained attention is a critical cognitive function reflected in an individual's whole-brain pattern of functional magnetic resonance imaging functional connectivity. However, sustained attention is not a purely static trait. Rather, attention waxes and wanes over time. Do functional brain networks that underlie individual differences in sustained attention also underlie changes in attentional state? To investigate, we replicate the finding that a validated connectome-based model of individual differences in sustained attention tracks pharmacologically induced changes in attentional state. Specifically, preregistered analyses revealed that participants exhibited functional connectivity signatures of stronger attention when awake than when under deep sedation with the anesthetic agent propofol. Furthermore, this effect was relatively selective to the predefined sustained attention networks: propofol administration modulated strength of the sustained attention networks more than it modulated strength of canonical resting-state networks and a network defined to predict fluid intelligence, and the functional connections most affected by propofol sedation overlapped with the sustained attention networks. Thus, propofol modulates functional connectivity signatures of sustained attention within individuals. More broadly, these findings underscore the utility of pharmacological intervention in testing both the generalizability and specificity of network-based models of cognitive function.
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Affiliation(s)
- Taylor A Chamberlain
- Department of Psychology, The University of Chicago, 5848 S University Ave, IL 60637, Chicago
| | - Monica D Rosenberg
- Department of Psychology, The University of Chicago, 5848 S University Ave, IL 60637, Chicago.,Neuroscience Institute, The University of Chicago, 5812 South Ellis Ave., MC 0912, Suite P-400, IL 60637, Chicago
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25
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Wang Y, Dong D, Chen X, Gao X, Liu Y, Xiao M, Guo C, Chen H. Individualized morphometric similarity predicts body mass index and food approach behavior in school-age children. Cereb Cortex 2022; 33:4794-4805. [PMID: 36300597 DOI: 10.1093/cercor/bhac380] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/19/2022] [Revised: 08/20/2022] [Accepted: 08/22/2022] [Indexed: 11/15/2022] Open
Abstract
Abstract
Childhood obesity is associated with alterations in brain structure. Previous studies generally used a single structural index to characterize the relationship between body mass index(BMI) and brain structure, which could not describe the alterations of structural covariance between brain regions. To cover this research gap, this study utilized two independent datasets with brain structure profiles and BMI of 155 school-aged children. Connectome-based predictive modeling(CPM) was used to explore whether children’s BMI is reliably predictable by the novel individualized morphometric similarity network(MSN). We revealed the MSN can predict the BMI in school-age children with good generalizability to unseen dataset. Moreover, these revealed significant brain structure covariant networks can further predict children’s food approach behavior. The positive predictive networks mainly incorporated connections between the frontoparietal network(FPN) and the visual network(VN), between the FPN and the limbic network(LN), between the default mode network(DMN) and the LN. The negative predictive network primarily incorporated connections between the FPN and DMN. These results suggested that the incomplete integration of the high-order brain networks and the decreased dedifferentiation of the high-order networks to the primary reward networks can be considered as a core structural basis of the imbalance between inhibitory control and reward processing in childhood obesity.
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Affiliation(s)
- Yulin Wang
- Sleep and NeuroImaging Center, Faculty of Psychology, Southwest University , Chongqing, 400715, China
- Key Laboratory of Cognition and Personality of Ministry of Education , Faculty of Psychology, Southwest University, Chongqing, 400715, China
| | - Debo Dong
- Key Laboratory of Cognition and Personality of Ministry of Education , Faculty of Psychology, Southwest University, Chongqing, 400715, China
- Institute of Neuroscience and Medicine, Brain & Behaviour (INM-7) , Research Centre Jülich, Jülich, Germany
| | - Ximei Chen
- Key Laboratory of Cognition and Personality of Ministry of Education, Faculty of Psychology , Southwest University, Chongqing, 400715, China
| | - Xiao Gao
- Key Laboratory of Cognition and Personality of Ministry of Education, Faculty of Psychology, Southwest University , Chongqing, 400715, China
| | - Yong Liu
- Key Laboratory of Cognition and Personality of Ministry of Education, Faculty of Psychology, Southwest University , Chongqing, 400715, China
| | - Mingyue Xiao
- Key Laboratory of Cognition and Personality of Ministry of Education, Faculty of Psychology, Southwest University , Chongqing, 400715, China
| | - Cheng Guo
- Research Center of Mental Health Education, Faculty of Psychology, Southwest University , Chongqing, 400715, Germany
| | - Hong Chen
- Key Laboratory of Cognition and Personality of Ministry of Education, Faculty of Psychology , Southwest University, Chongqing, 400715, China
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26
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Greene AS, Shen X, Noble S, Horien C, Hahn CA, Arora J, Tokoglu F, Spann MN, Carrión CI, Barron DS, Sanacora G, Srihari VH, Woods SW, Scheinost D, Constable RT. Brain-phenotype models fail for individuals who defy sample stereotypes. Nature 2022; 609:109-118. [PMID: 36002572 PMCID: PMC9433326 DOI: 10.1038/s41586-022-05118-w] [Citation(s) in RCA: 47] [Impact Index Per Article: 23.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/09/2021] [Accepted: 07/15/2022] [Indexed: 01/19/2023]
Abstract
Individual differences in brain functional organization track a range of traits, symptoms and behaviours1-12. So far, work modelling linear brain-phenotype relationships has assumed that a single such relationship generalizes across all individuals, but models do not work equally well in all participants13,14. A better understanding of in whom models fail and why is crucial to revealing robust, useful and unbiased brain-phenotype relationships. To this end, here we related brain activity to phenotype using predictive models-trained and tested on independent data to ensure generalizability15-and examined model failure. We applied this data-driven approach to a range of neurocognitive measures in a new, clinically and demographically heterogeneous dataset, with the results replicated in two independent, publicly available datasets16,17. Across all three datasets, we find that models reflect not unitary cognitive constructs, but rather neurocognitive scores intertwined with sociodemographic and clinical covariates; that is, models reflect stereotypical profiles, and fail when applied to individuals who defy them. Model failure is reliable, phenotype specific and generalizable across datasets. Together, these results highlight the pitfalls of a one-size-fits-all modelling approach and the effect of biased phenotypic measures18-20 on the interpretation and utility of resulting brain-phenotype models. We present a framework to address these issues so that such models may reveal the neural circuits that underlie specific phenotypes and ultimately identify individualized neural targets for clinical intervention.
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Affiliation(s)
- Abigail S Greene
- Interdepartmental Neuroscience Program, Yale School of Medicine, New Haven, CT, USA.
- MD-PhD program, Yale School of Medicine, New Haven, CT, USA.
| | - Xilin Shen
- Depatment of Radiology and Biomedical Imaging, Yale School of Medicine, New Haven, CT, USA
| | - Stephanie Noble
- Depatment of Radiology and Biomedical Imaging, Yale School of Medicine, New Haven, CT, USA
| | - Corey Horien
- Interdepartmental Neuroscience Program, Yale School of Medicine, New Haven, CT, USA
- MD-PhD program, Yale School of Medicine, New Haven, CT, USA
| | - C Alice Hahn
- Depatment of Radiology and Biomedical Imaging, Yale School of Medicine, New Haven, CT, USA
| | - Jagriti Arora
- Depatment of Radiology and Biomedical Imaging, Yale School of Medicine, New Haven, CT, USA
| | - Fuyuze Tokoglu
- Depatment of Radiology and Biomedical Imaging, Yale School of Medicine, New Haven, CT, USA
| | - Marisa N Spann
- Department of Psychiatry, Columbia University Irving Medical Center, New York, NY, USA
| | - Carmen I Carrión
- Department of Neurology, Yale School of Medicine, New Haven, CT, USA
| | - Daniel S Barron
- Department of Anesthesiology and Pain Medicine, University of Washington, Seattle, WA, USA
- Department of Psychiatry, Yale School of Medicine, New Haven, CT, USA
- Department of Psychiatry, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA
- Department of Anesthesiology, Perioperative and Pain Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA
| | - Gerard Sanacora
- Department of Psychiatry, Yale School of Medicine, New Haven, CT, USA
| | - Vinod H Srihari
- Department of Psychiatry, Yale School of Medicine, New Haven, CT, USA
| | - Scott W Woods
- Department of Psychiatry, Yale School of Medicine, New Haven, CT, USA
| | - Dustin Scheinost
- Interdepartmental Neuroscience Program, Yale School of Medicine, New Haven, CT, USA
- Depatment of Radiology and Biomedical Imaging, Yale School of Medicine, New Haven, CT, USA
- Department of Biomedical Engineering, Yale School of Engineering and Applied Science, New Haven, CT, USA
- Department of Statistics and Data Science, Yale University, New Haven, CT, USA
- Child Study Center, Yale School of Medicine, New Haven, CT, USA
| | - R Todd Constable
- Interdepartmental Neuroscience Program, Yale School of Medicine, New Haven, CT, USA.
- Depatment of Radiology and Biomedical Imaging, Yale School of Medicine, New Haven, CT, USA.
- Department of Biomedical Engineering, Yale School of Engineering and Applied Science, New Haven, CT, USA.
- Department of Neurosurgery, Yale School of Medicine, New Haven, CT, USA.
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27
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Li T, Pei Z, Zhu Z, Wu X, Feng C. Intrinsic brain activity patterns across large-scale networks predict reciprocity propensity. Hum Brain Mapp 2022; 43:5616-5629. [PMID: 36054523 PMCID: PMC9704792 DOI: 10.1002/hbm.26038] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/09/2022] [Revised: 06/06/2022] [Accepted: 07/25/2022] [Indexed: 01/15/2023] Open
Abstract
Reciprocity is prevalent across human societies, but individuals are heterogeneous regarding their reciprocity propensity. Although a large body of task-based brain imaging measures has shed light on the neural underpinnings of reciprocity at group level, the neural basis underlying the individual differences in reciprocity propensity remains largely unclear. Here, we combined brain imaging and machine learning techniques to individually predict reciprocity propensity from resting-state brain activity measured by fractional amplitude of low-frequency fluctuation. The brain regions contributing to the prediction were then analyzed for functional connectivity and decoding analyses, allowing for a data-driven quantitative inference on psychophysiological functions. Our results indicated that patterns of resting-state brain activity across multiple brain systems were capable of predicting individual reciprocity propensity, with the contributing regions distributed across the salience (e.g., ventrolateral prefrontal cortex), fronto-parietal (e.g., dorsolateral prefrontal cortex), default mode (e.g., ventromedial prefrontal cortex), and sensorimotor (e.g., supplementary motor area) networks. Those contributing brain networks are implicated in emotion and cognitive control, mentalizing, and motor-based processes, respectively. Collectively, these findings provide novel evidence on the neural signatures underlying the individual differences in reciprocity, and lend support the assertion that reciprocity emerges from interactions among regions embodied in multiple large-scale brain networks.
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Affiliation(s)
- Ting Li
- Key Laboratory of Brain, Cognition and Education Sciences (South China Normal University)Ministry of EducationGuangzhouChina,School of Psychology, Institute of Brain Research and Rehabilitation (IBRR), Center for Studies of Psychological Application, and Guangdong Key Laboratory of Mental Health and Cognitive ScienceSouth China Normal UniversityGuangzhouChina,Institute of Brain and Psychological SciencesSichuan Normal UniversityChengduChina
| | - Zhaodi Pei
- School of Artificial IntelligenceBeijing Normal UniversityBeijingChina,Engineering Research Center of Intelligent Technology and Educational Application of Ministry of EducationBeijing Normal UniversityBeijingChina
| | - Zhiyuan Zhu
- School of Artificial IntelligenceBeijing Normal UniversityBeijingChina,Engineering Research Center of Intelligent Technology and Educational Application of Ministry of EducationBeijing Normal UniversityBeijingChina
| | - Xia Wu
- School of Artificial IntelligenceBeijing Normal UniversityBeijingChina,Engineering Research Center of Intelligent Technology and Educational Application of Ministry of EducationBeijing Normal UniversityBeijingChina
| | - Chunliang Feng
- Key Laboratory of Brain, Cognition and Education Sciences (South China Normal University)Ministry of EducationGuangzhouChina,School of Psychology, Institute of Brain Research and Rehabilitation (IBRR), Center for Studies of Psychological Application, and Guangdong Key Laboratory of Mental Health and Cognitive ScienceSouth China Normal UniversityGuangzhouChina
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28
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Farruggia MC, Pellegrino R, Scheinost D. Functional Connectivity of the Chemosenses: A Review. Front Syst Neurosci 2022; 16:865929. [PMID: 35813269 PMCID: PMC9257046 DOI: 10.3389/fnsys.2022.865929] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2022] [Accepted: 05/05/2022] [Indexed: 01/01/2023] Open
Abstract
Functional connectivity approaches have long been used in cognitive neuroscience to establish pathways of communication between and among brain regions. However, the use of these analyses to better understand how the brain processes chemosensory information remains nascent. In this review, we conduct a literature search of all functional connectivity papers of olfaction, gustation, and chemesthesis, with 103 articles discovered in total. These publications largely use approaches of seed-based functional connectivity and psychophysiological interactions, as well as effective connectivity approaches such as Granger Causality, Dynamic Causal Modeling, and Structural Equation Modeling. Regardless of modality, studies largely focus on elucidating neural correlates of stimulus qualities such as identity, pleasantness, and intensity, with task-based paradigms most frequently implemented. We call for further "model free" or data-driven approaches in predictive modeling to craft brain-behavior relationships that are free from a priori hypotheses and not solely based on potentially irreproducible literature. Moreover, we note a relative dearth of resting-state literature, which could be used to better understand chemosensory networks with less influence from motion artifacts induced via gustatory or olfactory paradigms. Finally, we note a lack of genomics data, which could clarify individual and heritable differences in chemosensory perception.
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Affiliation(s)
- Michael C. Farruggia
- Interdepartmental Neuroscience Program, Yale University, New Haven, CT, United States,*Correspondence: Michael C. Farruggia,
| | | | - Dustin Scheinost
- Interdepartmental Neuroscience Program, Yale University, New Haven, CT, United States,Child Study Center, Yale School of Medicine, New Haven, CT, United States,Department of Biomedical Engineering, Yale School of Engineering and Applied Science, New Haven, CT, United States,Department of Radiology & Biomedical Imaging, Yale School of Medicine, New Haven, CT, United States,Wu Tsai Institute, Yale University, New Haven, CT, United States
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29
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Gal S, Coldham Y, Tik N, Bernstein-Eliav M, Tavor I. Act natural: Functional connectivity from naturalistic stimuli fMRI outperforms resting-state in predicting brain activity. Neuroimage 2022; 258:119359. [PMID: 35680054 DOI: 10.1016/j.neuroimage.2022.119359] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/09/2021] [Revised: 05/09/2022] [Accepted: 06/02/2022] [Indexed: 12/12/2022] Open
Abstract
The search for an 'ideal' approach to investigate the functional connections in the human brain is an ongoing challenge for the neuroscience community. While resting-state functional magnetic resonance imaging (fMRI) has been widely used to study individual functional connectivity patterns, recent work has highlighted the benefits of collecting functional connectivity data while participants are exposed to naturalistic stimuli, such as watching a movie or listening to a story. For example, functional connectivity data collected during movie-watching were shown to predict cognitive and emotional scores more accurately than resting-state-derived functional connectivity. We have previously reported a tight link between resting-state functional connectivity and task-derived neural activity, such that the former successfully predicts the latter. In the current work we use data from the Human Connectome Project to demonstrate that naturalistic-stimulus-derived functional connectivity predicts task-induced brain activation maps more accurately than resting-state-derived functional connectivity. We then show that activation maps predicted using naturalistic stimuli are better predictors of individual intelligence scores than activation maps predicted using resting-state. We additionally examine the influence of naturalistic-stimulus type on prediction accuracy. Our findings emphasize the potential of naturalistic stimuli as a promising alternative to resting-state fMRI for connectome-based predictive modelling of individual brain activity and cognitive traits.
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Affiliation(s)
- Shachar Gal
- Department of Anatomy and Anthropology, Sackler Faculty of Medicine, Tel Aviv University, Tel Aviv 6997801, Israel; Sagol School of Neuroscience, Tel Aviv University, Tel Aviv, Israel
| | - Yael Coldham
- Department of Anatomy and Anthropology, Sackler Faculty of Medicine, Tel Aviv University, Tel Aviv 6997801, Israel; Sagol School of Neuroscience, Tel Aviv University, Tel Aviv, Israel
| | - Niv Tik
- Department of Anatomy and Anthropology, Sackler Faculty of Medicine, Tel Aviv University, Tel Aviv 6997801, Israel; Sagol School of Neuroscience, Tel Aviv University, Tel Aviv, Israel
| | - Michal Bernstein-Eliav
- Department of Anatomy and Anthropology, Sackler Faculty of Medicine, Tel Aviv University, Tel Aviv 6997801, Israel
| | - Ido Tavor
- Department of Anatomy and Anthropology, Sackler Faculty of Medicine, Tel Aviv University, Tel Aviv 6997801, Israel; Sagol School of Neuroscience, Tel Aviv University, Tel Aviv, Israel; Strauss Center for Computational Neuroimaging, Tel Aviv University, Tel Aviv, Israel.
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30
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Yoo K, Rosenberg MD, Kwon YH, Lin Q, Avery EW, Sheinost D, Constable RT, Chun MM. A brain-based general measure of attention. Nat Hum Behav 2022; 6:782-795. [PMID: 35241793 PMCID: PMC9232838 DOI: 10.1038/s41562-022-01301-1] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/17/2021] [Accepted: 01/14/2022] [Indexed: 11/15/2022]
Abstract
Attention is central to many aspects of cognition, but there is no singular neural measure of a person's overall attentional functioning across tasks. Here, using original data from 92 participants performing three different attention-demanding tasks during functional magnetic resonance imaging, we constructed a suite of whole-brain models that can predict a profile of multiple attentional components (sustained attention, divided attention and tracking, and working memory capacity) for novel individuals. Multiple brain regions across the salience, subcortical and frontoparietal networks drove accurate predictions, supporting a common (general) attention factor across tasks, distinguished from task-specific ones. Furthermore, connectome-to-connectome transformation modelling generated an individual's task-related connectomes from rest functional magnetic resonance imaging, substantially improving predictive power. Finally, combining the connectome transformation and general attention factor, we built a standardized measure that shows superior generalization across four independent datasets (total N = 495) of various attentional measures, suggesting broad utility for research and clinical applications.
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Affiliation(s)
- Kwangsun Yoo
- Department of Psychology, Yale University, New Haven, CT, USA.
| | - Monica D Rosenberg
- Department of Psychology, Yale University, New Haven, CT, USA,Department of Psychology, University of Chicago, Chicago, IL, USA
| | - Young Hye Kwon
- Department of Psychology, Yale University, New Haven, CT, USA
| | - Qi Lin
- Department of Psychology, Yale University, New Haven, CT, USA
| | - Emily W Avery
- Department of Psychology, Yale University, New Haven, CT, USA
| | - Dustin Sheinost
- Department of Radiology and Biomedical Imaging, Yale School of Medicine, New Haven, CT, USA
| | - R Todd Constable
- Department of Radiology and Biomedical Imaging, Yale School of Medicine, New Haven, CT, USA,Interdepartmental Neuroscience Program, Yale University, New Haven, CT, USA,Department of Neurosurgery, Yale School of Medicine, New Haven, CT, USA
| | - Marvin M Chun
- Department of Psychology, Yale University, New Haven, CT, USA. .,Interdepartmental Neuroscience Program, Yale University, New Haven, CT, USA. .,Department of Neuroscience, Yale School of Medicine, New Haven, CT, USA. .,Wu Tsai Institute, Yale University, New Haven, CT, USA.
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31
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Veldhuizen MG, Cecchetto C, Fjaeldstad AW, Farruggia MC, Hartig R, Nakamura Y, Pellegrino R, Yeung AWK, Fischmeister FPS. Future Directions for Chemosensory Connectomes: Best Practices and Specific Challenges. Front Syst Neurosci 2022; 16:885304. [PMID: 35707745 PMCID: PMC9190244 DOI: 10.3389/fnsys.2022.885304] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2022] [Accepted: 04/13/2022] [Indexed: 01/14/2023] Open
Abstract
Ecological chemosensory stimuli almost always evoke responses in more than one sensory system. Moreover, any sensory processing takes place along a hierarchy of brain regions. So far, the field of chemosensory neuroimaging is dominated by studies that examine the role of brain regions in isolation. However, to completely understand neural processing of chemosensation, we must also examine interactions between regions. In general, the use of connectivity methods has increased in the neuroimaging field, providing important insights to physical sensory processing, such as vision, audition, and touch. A similar trend has been observed in chemosensory neuroimaging, however, these established techniques have largely not been rigorously applied to imaging studies on the chemical senses, leaving network insights overlooked. In this article, we first highlight some recent work in chemosensory connectomics and we summarize different connectomics techniques. Then, we outline specific challenges for chemosensory connectome neuroimaging studies. Finally, we review best practices from the general connectomics and neuroimaging fields. We recommend future studies to develop or use the following methods we perceive as key to improve chemosensory connectomics: (1) optimized study designs, (2) reporting guidelines, (3) consensus on brain parcellations, (4) consortium research, and (5) data sharing.
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Affiliation(s)
- Maria G. Veldhuizen
- Department of Anatomy, Faculty of Medicine, Mersin University, Mersin, Turkey
| | - Cinzia Cecchetto
- Department of General Psychology, University of Padova, Padua, Italy
| | - Alexander W. Fjaeldstad
- Flavour Clinic, Department of Otorhinolaryngology, Regional Hospital West Jutland, Holstebro, Denmark
| | - Michael C. Farruggia
- Interdepartmental Neuroscience Program, Yale University, New Haven, CT, United States
| | - Renée Hartig
- Department of Psychiatry and Psychotherapy, University Medical Center, Johannes Gutenberg University of Mainz, Mainz, Germany,Max Planck Institute for Biological Cybernetics, Tübingen, Germany,Functional and Comparative Neuroanatomy Laboratory, Werner Reichardt Centre for Integrative Neuroscience, Eberhard Karls University of Tübingen, Tübingen, Germany
| | - Yuko Nakamura
- The Graduate School of Arts and Sciences, The University of Tokyo, Tokyo, Japan
| | | | - Andy W. K. Yeung
- Oral and Maxillofacial Radiology, Applied Oral Sciences and Community Dental Care, Faculty of Dentistry, The University of Hong Kong, Pokfulam, Hong Kong SAR, China
| | - Florian Ph. S. Fischmeister
- Institute of Psychology, University of Graz, Graz, Austria,Department of Biomedical Imaging and Image-Guided Therapy, Medical University of Vienna, Vienna, Austria,BioTechMed-Graz, Graz, Austria,*Correspondence: Florian Ph. S. Fischmeister,
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32
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Zhang L, Huang G, Liang Z, Li L, Zhang Z. Estimating scale-free dynamic effective connectivity networks from fMRI using group-wise spatial–temporal regularizations. Neurocomputing 2022. [DOI: 10.1016/j.neucom.2022.02.041] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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33
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Chen J, Tam A, Kebets V, Orban C, Ooi LQR, Asplund CL, Marek S, Dosenbach NUF, Eickhoff SB, Bzdok D, Holmes AJ, Yeo BTT. Shared and unique brain network features predict cognitive, personality, and mental health scores in the ABCD study. Nat Commun 2022; 13:2217. [PMID: 35468875 PMCID: PMC9038754 DOI: 10.1038/s41467-022-29766-8] [Citation(s) in RCA: 56] [Impact Index Per Article: 28.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/20/2020] [Accepted: 03/18/2022] [Indexed: 12/30/2022] Open
Abstract
How individual differences in brain network organization track behavioral variability is a fundamental question in systems neuroscience. Recent work suggests that resting-state and task-state functional connectivity can predict specific traits at the individual level. However, most studies focus on single behavioral traits, thus not capturing broader relationships across behaviors. In a large sample of 1858 typically developing children from the Adolescent Brain Cognitive Development (ABCD) study, we show that predictive network features are distinct across the domains of cognitive performance, personality scores and mental health assessments. On the other hand, traits within each behavioral domain are predicted by similar network features. Predictive network features and models generalize to other behavioral measures within the same behavioral domain. Although tasks are known to modulate the functional connectome, predictive network features are similar between resting and task states. Overall, our findings reveal shared brain network features that account for individual variation within broad domains of behavior in childhood.
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Affiliation(s)
- Jianzhong Chen
- Department of Electrical and Computer Engineering, National University of Singapore, Singapore, Singapore.,Centre for Sleep and Cognition, National University of Singapore, Singapore, Singapore.,Centre for Translational MR Research, National University of Singapore, Singapore, Singapore.,N.1 Institute for Health & Institute for Digital Medicine (WisDM), National University of Singapore, Singapore, Singapore
| | - Angela Tam
- Department of Electrical and Computer Engineering, National University of Singapore, Singapore, Singapore.,Centre for Sleep and Cognition, National University of Singapore, Singapore, Singapore.,Centre for Translational MR Research, National University of Singapore, Singapore, Singapore.,N.1 Institute for Health & Institute for Digital Medicine (WisDM), National University of Singapore, Singapore, Singapore
| | - Valeria Kebets
- Department of Electrical and Computer Engineering, National University of Singapore, Singapore, Singapore.,Centre for Sleep and Cognition, National University of Singapore, Singapore, Singapore.,Centre for Translational MR Research, National University of Singapore, Singapore, Singapore.,N.1 Institute for Health & Institute for Digital Medicine (WisDM), National University of Singapore, Singapore, Singapore
| | - Csaba Orban
- Department of Electrical and Computer Engineering, National University of Singapore, Singapore, Singapore.,Centre for Sleep and Cognition, National University of Singapore, Singapore, Singapore.,Centre for Translational MR Research, National University of Singapore, Singapore, Singapore.,N.1 Institute for Health & Institute for Digital Medicine (WisDM), National University of Singapore, Singapore, Singapore
| | - Leon Qi Rong Ooi
- Department of Electrical and Computer Engineering, National University of Singapore, Singapore, Singapore.,Centre for Sleep and Cognition, National University of Singapore, Singapore, Singapore.,Centre for Translational MR Research, National University of Singapore, Singapore, Singapore.,N.1 Institute for Health & Institute for Digital Medicine (WisDM), National University of Singapore, Singapore, Singapore.,Integrative Sciences and Engineering Programme (ISEP), National University of Singapore, Singapore, Singapore
| | - Christopher L Asplund
- Centre for Sleep and Cognition, National University of Singapore, Singapore, Singapore.,Centre for Translational MR Research, National University of Singapore, Singapore, Singapore.,N.1 Institute for Health & Institute for Digital Medicine (WisDM), National University of Singapore, Singapore, Singapore.,Division of Social Sciences, Yale-NUS College, Singapore, Singapore.,Department of Psychology, National University of Singapore, Singapore, Singapore.,Duke-NUS Medical School, Singapore, Singapore
| | - Scott Marek
- Department of Psychiatry, Washington University School of Medicine, St. Louis, MO, USA
| | - Nico U F Dosenbach
- Department of Neurology, Washington University School of Medicine, St. Louis, MO, USA.,Department of Radiology, Washington University School of Medicine, St. Louis, MO, USA.,Department of Biomedical Engineering, Washington University School of Medicine, St. Louis, MO, USA.,Department of Pediatrics, Washington University School of Medicine, St. Louis, MO, USA
| | - Simon B Eickhoff
- Institute for Systems Neuroscience, Medical Faculty, Heinrich-Heine University Düsseldorf, Düsseldorf, Germany.,Institute of Neuroscience and Medicine, Brain & Behaviours (INM-7), Research Center Jülich, Jülich, Germany
| | - Danilo Bzdok
- Department of Biomedical Engineering, Montreal Neurological Institute, McGill University, Montreal, QC, Canada.,Mila - Quebec AI Institute, Montreal, QC, Canada
| | - Avram J Holmes
- Yale University, Departments of Psychology and Psychiatry, New Haven, CT, USA
| | - B T Thomas Yeo
- Department of Electrical and Computer Engineering, National University of Singapore, Singapore, Singapore. .,Centre for Sleep and Cognition, National University of Singapore, Singapore, Singapore. .,Centre for Translational MR Research, National University of Singapore, Singapore, Singapore. .,N.1 Institute for Health & Institute for Digital Medicine (WisDM), National University of Singapore, Singapore, Singapore. .,Integrative Sciences and Engineering Programme (ISEP), National University of Singapore, Singapore, Singapore. .,Martinos Center for Biomedical Imaging, Massachusetts General Hospital, Charlestown, MA, USA.
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34
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Using resting thalamic connectivity to identify the relationship between Eysenck personality traits and intelligence in healthy adults. Brain Res 2022; 1787:147922. [PMID: 35460643 DOI: 10.1016/j.brainres.2022.147922] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/07/2022] [Revised: 04/05/2022] [Accepted: 04/15/2022] [Indexed: 11/23/2022]
Abstract
Personality refers to a set of relatively stable psychological characteristics of individuals and has been associated with intelligence. It is well known that the thalamus plays an important role in cognitive processes and personality traits, but the relationship between personality traits, thalamic function, and intelligence has rarely been directly explored. Hence, we investigated the relationship between Eysenck personality traits, resting-state functional connectivity (rsFC) of the thalamus, and intelligence in a large sample of healthy adults (N = 176). We found that the trait of psychoticism was negatively associated with intelligence. The high intelligence group showed significantly lower psychoticism and demonstrated enhanced thalamic connectivity to the amygdala, inferior parietal lobules, pallidum, medial superior/middle frontal gyrus, and precuneus. Furthermore, a mediation analysis indicated that the FC between the left thalamus and left amygdala significantly mediated the correlation between psychoticism and full IQ (FIQ). These findings suggest that intelligent people may be less prone to psychoticism. Meanwhile, thalamic rsFC may reflect individual differences in intelligence and play a key role in the relationship between personality traits and intellectual abilities.
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35
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Shi AP, Yu Y, Hu B, Li YT, Wang W, Cui GB. Large-scale functional connectivity predicts cognitive impairment related to type 2 diabetes mellitus. World J Diabetes 2022; 13:110-125. [PMID: 35211248 PMCID: PMC8855139 DOI: 10.4239/wjd.v13.i2.110] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 08/23/2021] [Revised: 12/10/2021] [Accepted: 01/06/2022] [Indexed: 02/06/2023] Open
Abstract
BACKGROUND Large-scale functional connectivity (LSFC) patterns in the brain have unique intrinsic characteristics. Abnormal LSFC patterns have been found in patients with dementia, as well as in those with mild cognitive impairment (MCI), and these patterns predicted their cognitive performance. It has been reported that patients with type 2 diabetes mellitus (T2DM) may develop MCI that could progress to dementia. We investigated whether we could adopt LSFC patterns as discriminative features to predict the cognitive function of patients with T2DM, using connectome-based predictive modeling (CPM) and a support vector machine.
AIM To investigate the utility of LSFC for predicting cognitive impairment related to T2DM more accurately and reliably.
METHODS Resting-state functional magnetic resonance images were derived from 42 patients with T2DM and 24 healthy controls. Cognitive function was assessed using the Montreal Cognitive Assessment (MoCA). Patients with T2DM were divided into two groups, according to the presence (T2DM-C; n = 16) or absence (T2DM-NC; n = 26) of MCI. Brain regions were marked using Harvard Oxford (HOA-112), automated anatomical labeling (AAL-116), and 264-region functional (Power-264) atlases. LSFC biomarkers for predicting MoCA scores were identified using a new CPM technique. Subsequently, we used a support vector machine based on LSFC patterns for among-group differentiation. The area under the receiver operating characteristic curve determined the appearance of the classification.
RESULTS CPM could predict the MoCA scores in patients with T2DM (Pearson’s correlation coefficient between predicted and actual MoCA scores, r = 0.32, P=0.0066 [HOA-112 atlas]; r = 0.32, P=0.0078 [AAL-116 atlas]; r = 0.42, P=0.0038 [Power-264 atlas]), indicating that LSFC patterns represent cognition-level measures in these patients. Positive (anti-correlated) LSFC networks based on the Power-264 atlas showed the best predictive performance; moreover, we observed new brain regions of interest associated with T2DM-related cognition. The area under the receiver operating characteristic curve values (T2DM-NC group vs. T2DM-C group) were 0.65-0.70, with LSFC matrices based on HOA-112 and Power-264 atlases having the highest value (0.70). Most discriminative and attractive LSFCs were related to the default mode network, limbic system, and basal ganglia.
CONCLUSION LSFC provides neuroimaging-based information that may be useful in detecting MCI early and accurately in patients with T2DM.
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Affiliation(s)
- An-Ping Shi
- Department of Radiology, Department of Radiology and Functional and Molecular Imaging Key Lab of Shaanxi Province, The Affiliated Tangdu Hospital of Air Force Medical University (Fourth Military Medical University), Xi'an 710038, Shaanxi Province, China
| | - Ying Yu
- Department of Radiology, Department of Radiology and Functional and Molecular Imaging Key Lab of Shaanxi Province, The Affiliated Tangdu Hospital of Air Force Medical University (Fourth Military Medical University), Xi'an 710038, Shaanxi Province, China
| | - Bo Hu
- Department of Radiology, Department of Radiology and Functional and Molecular Imaging Key Lab of Shaanxi Province, The Affiliated Tangdu Hospital of Air Force Medical University (Fourth Military Medical University), Xi'an 710038, Shaanxi Province, China
| | - Yu-Ting Li
- Department of Radiology, Department of Radiology and Functional and Molecular Imaging Key Lab of Shaanxi Province, The Affiliated Tangdu Hospital of Air Force Medical University (Fourth Military Medical University), Xi'an 710038, Shaanxi Province, China
| | - Wen Wang
- Department of Radiology, Department of Radiology and Functional and Molecular Imaging Key Lab of Shaanxi Province, The Affiliated Tangdu Hospital of Air Force Medical University (Fourth Military Medical University), Xi'an 710038, Shaanxi Province, China
| | - Guang-Bin Cui
- Department of Radiology, Department of Radiology and Functional and Molecular Imaging Key Lab of Shaanxi Province, The Affiliated Tangdu Hospital of Air Force Medical University (Fourth Military Medical University), Xi'an 710038, Shaanxi Province, China
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36
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Yoon L, Carranza AF, Swartz JR. Resting-State Functional Connectivity Associated With Extraversion and Agreeableness in Adolescence. Front Behav Neurosci 2022; 15:644790. [PMID: 35046781 PMCID: PMC8762207 DOI: 10.3389/fnbeh.2021.644790] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2020] [Accepted: 12/08/2021] [Indexed: 11/23/2022] Open
Abstract
Although adolescence is a period in which developmental changes occur in brain connectivity, personality formation, and peer interaction, few studies have examined the neural correlates of personality dimensions related to social behavior within adolescent samples. The current study aims to investigate whether adolescents’ brain functional connectivity is associated with extraversion and agreeableness, personality dimensions linked to peer acceptance, social network size, and friendship quality. Considering sex-variant neural maturation in adolescence, we also examined sex-specific associations between personality and functional connectivity. Using resting-state functional magnetic resonance imaging (fMRI) data from a community sample of 70 adolescents aged 12–15, we examined associations between self-reported extraversion and agreeableness and seed-to-whole brain connectivity with the amygdala as a seed region of interest. Then, using 415 brain regions that correspond to 8 major brain networks and subcortex, we explored neural connectivity within brain networks and across the whole-brain. We conducted group-level multiple regression analyses with the regressors of extraversion, agreeableness, and their interactions with sex. Results demonstrated that amygdala connectivity with the postcentral gyrus, middle temporal gyrus, and the temporal pole is positively associated with extraversion in girls and negatively associated with extraversion in boys. Agreeableness was positively associated with amygdala connectivity with the middle occipital cortex and superior parietal cortex, in the same direction for boys and girls. Results of the whole-brain connectivity analysis revealed that the connectivity of the postcentral gyrus, located in the dorsal attention network, with regions in default mode network (DMN), salience/ventral attention network, and control network (CON) was associated with extraversion, with most connections showing positive associations in girls and negative associations in boys. For agreeableness, results of the within-network connectivity analysis showed that connections within the limbic network were positively associated with agreeableness in boys while negatively associated with or not associated with agreeableness in girls. Results suggest that intrinsic functional connectivity may contribute to adolescents’ individual differences in extraversion and agreeableness and highlights sex-specific neural connectivity patterns associated with the two personality dimensions. This study deepens our understanding of the neurobiological correlates of adolescent personality that may lead to different developmental trajectories of social experience.
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37
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McCulloch DEW, Madsen MK, Stenbæk DS, Kristiansen S, Ozenne B, Jensen PS, Knudsen GM, Fisher PM. Lasting effects of a single psilocybin dose on resting-state functional connectivity in healthy individuals. J Psychopharmacol 2022; 36:74-84. [PMID: 34189985 PMCID: PMC8801642 DOI: 10.1177/02698811211026454] [Citation(s) in RCA: 25] [Impact Index Per Article: 12.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 12/04/2022]
Abstract
BACKGROUND Psilocybin is a psychedelic drug that has shown lasting positive effects on clinical symptoms and self-reported well-being following a single dose. There has been little research into the long-term effects of psilocybin on brain connectivity in humans. AIM Evaluate changes in resting-state functional connectivity (RSFC) at 1 week and 3 months after one psilocybin dose in 10 healthy psychedelic-naïve volunteers and explore associations between change in RSFC and related measures. METHODS Participants received 0.2-0.3 mg/kg psilocybin in a controlled setting. Participants completed resting-state functional magnetic resonance imaging (fMRI) scans at baseline, 1-week and 3-month post-administration and [11C]Cimbi-36 PET scans at baseline and 1 week. We examined changes in within-network, between-network and region-to-region RSFC. We explored associations between changes in RSFC and psilocybin-induced phenomenology as well as changes in psychological measures and neocortex serotonin 2A receptor binding. RESULTS Psilocybin was well tolerated and produced positive changes in well-being. At 1 week only, executive control network (ECN) RSFC was significantly decreased (Cohen's d = -1.73, pFWE = 0.010). We observed no other significant changes in RSFC at 1 week or 3 months, nor changes in region-to-region RSFC. Exploratory analyses indicated that decreased ECN RSFC at 1 week predicted increased mindfulness at 3 months (r = -0.65). CONCLUSIONS These findings in a small cohort indicate that psilocybin affects ECN function within the psychedelic 'afterglow' period. Our findings implicate ECN modulation as mediating psilocybin-induced, long-lasting increases in mindfulness. Although our findings implicate a neural pathway mediating lasting psilocybin effects, it is notable that changes in neuroimaging measures at 3 months, when personality changes are observed, remain to be identified.
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Affiliation(s)
| | - Martin Korsbak Madsen
- Neurobiology Research Unit and NeuroPharm, Rigshospitalet, Copenhagen, Denmark,Institute of Clinical Medicine, University of Copenhagen, Copenhagen, Denmark
| | - Dea Siggaard Stenbæk
- Neurobiology Research Unit and NeuroPharm, Rigshospitalet, Copenhagen, Denmark,Department of Psychology, University of Copenhagen, Copenhagen, Denmark
| | - Sara Kristiansen
- Neurobiology Research Unit and NeuroPharm, Rigshospitalet, Copenhagen, Denmark
| | - Brice Ozenne
- Neurobiology Research Unit and NeuroPharm, Rigshospitalet, Copenhagen, Denmark,Section of Biostatistics, Department of Public Health, University of Copenhagen, Copenhagen, Denmark
| | - Peter Steen Jensen
- Neurobiology Research Unit and NeuroPharm, Rigshospitalet, Copenhagen, Denmark
| | - Gitte Moos Knudsen
- Neurobiology Research Unit and NeuroPharm, Rigshospitalet, Copenhagen, Denmark,Institute of Clinical Medicine, University of Copenhagen, Copenhagen, Denmark
| | - Patrick MacDonald Fisher
- Neurobiology Research Unit and NeuroPharm, Rigshospitalet, Copenhagen, Denmark,Patrick MacDonald Fisher, Neurobiology Research Unit, Rigshospitalet Building 8057, 8 Inge Lehmanns Vej, Copenhagen 2100, Denmark.
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38
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Predicting multilingual effects on executive function and individual connectomes in children: An ABCD study. Proc Natl Acad Sci U S A 2021; 118:2110811118. [PMID: 34845019 DOI: 10.1073/pnas.2110811118] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 10/13/2021] [Indexed: 11/18/2022] Open
Abstract
While there is a substantial amount of work studying multilingualism's effect on cognitive functions, little is known about how the multilingual experience modulates the brain as a whole. In this study, we analyzed data of over 1,000 children from the Adolescent Brain Cognitive Development (ABCD) Study to examine whether monolinguals and multilinguals differ in executive function, functional brain connectivity, and brain-behavior associations. We observed significantly better performance from multilingual children than monolinguals in working-memory tasks. In one finding, we were able to classify multilinguals from monolinguals using only their whole-brain functional connectome at rest and during an emotional n-back task. Compared to monolinguals, the multilingual group had different functional connectivity mainly in the occipital lobe and subcortical areas during the emotional n-back task and in the occipital lobe and prefrontal cortex at rest. In contrast, we did not find any differences in behavioral performance and functional connectivity when performing a stop-signal task. As a second finding, we investigated the degree to which behavior is reflected in the brain by implementing a connectome-based behavior prediction approach. The multilingual group showed a significant correlation between observed and connectome-predicted individual working-memory performance scores, while the monolingual group did not show any correlations. Overall, our observations suggest that multilingualism enhances executive function and reliably modulates the corresponding brain functional connectome, distinguishing multilinguals from monolinguals even at the developmental stage.
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39
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Martin CG, He BJ, Chang C. State-related neural influences on fMRI connectivity estimation. Neuroimage 2021; 244:118590. [PMID: 34560268 PMCID: PMC8815005 DOI: 10.1016/j.neuroimage.2021.118590] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2021] [Revised: 09/11/2021] [Accepted: 09/16/2021] [Indexed: 12/01/2022] Open
Abstract
The spatiotemporal structure of functional magnetic resonance imaging (fMRI) signals has provided a valuable window into the network underpinnings of human brain function and dysfunction. Although some cross-regional temporal correlation patterns (functional connectivity; FC) exhibit a high degree of stability across individuals and species, there is growing acknowledgment that measures of FC can exhibit marked changes over a range of temporal scales. Further, FC can covary with experimental task demands and ongoing neural processes linked to arousal, consciousness and perception, cognitive and affective state, and brain-body interactions. The increased recognition that such interrelated neural processes modulate FC measurements has raised both challenges and new opportunities in using FC to investigate brain function. Here, we review recent advances in the quantification of neural effects that shape fMRI FC and discuss the broad implications of these findings in the design and analysis of fMRI studies. We also discuss how a more complete understanding of the neural factors that shape FC measurements can resolve apparent inconsistencies in the literature and lead to more interpretable conclusions from fMRI studies.
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Affiliation(s)
- Caroline G Martin
- Department of Electrical Engineering and Computer Science, Vanderbilt University, Nashville, TN, USA
| | - Biyu J He
- Neuroscience Institute, New York University School of Medicine, New York, NY 10016, USA; Departments of Neurology, Neuroscience & Physiology, and Radiology, New York University School of Medicine, New York, NY 10016, USA
| | - Catie Chang
- Department of Electrical Engineering and Computer Science, Vanderbilt University, Nashville, TN, USA; Department of Biomedical Engineering, Vanderbilt University, Nashville, TN, USA.
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40
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Finn ES. Is it time to put rest to rest? Trends Cogn Sci 2021; 25:1021-1032. [PMID: 34625348 PMCID: PMC8585722 DOI: 10.1016/j.tics.2021.09.005] [Citation(s) in RCA: 84] [Impact Index Per Article: 28.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/15/2021] [Revised: 09/08/2021] [Accepted: 09/10/2021] [Indexed: 12/29/2022]
Abstract
The so-called resting state, in which participants lie quietly with no particular inputs or outputs, represented a paradigm shift from conventional task-based studies in human neuroimaging. Our foray into rest was fruitful from both a scientific and methodological perspective, but at this point, how much more can we learn from rest on its own? While rest still dominates in many subfields, data from tasks have empirically demonstrated benefits, as well as the potential to provide insights about the mind in addition to the brain. I argue that we can accelerate progress in human neuroscience by de-emphasizing rest in favor of more grounded experiments, including promising integrated designs that respect the prominence of self-generated activity while offering enhanced control and interpretability.
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Affiliation(s)
- Emily S Finn
- Department of Psychological and Brain Sciences, Dartmouth College, Hanover, NH 03755, USA.
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41
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Altered Dynamic Functional Connectivity of Cuneus in Schizophrenia Patients: A Resting-State fMRI Study. APPLIED SCIENCES-BASEL 2021. [DOI: 10.3390/app112311392] [Citation(s) in RCA: 22] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Abstract
Objective: Schizophrenia (SZ) is a functional mental condition that has a significant impact on patients’ social lives. As a result, accurate diagnosis of SZ has attracted researchers’ interest. Based on previous research, resting-state functional magnetic resonance imaging (rsfMRI) reported neural alterations in SZ. In this study, we attempted to investigate if dynamic functional connectivity (dFC) could reveal changes in temporal interactions between SZ patients and healthy controls (HC) beyond static functional connectivity (sFC) in the cuneus, using the publicly available COBRE dataset. Methods: Sliding windows were applied to 72 SZ patients’ and 74 healthy controls’ (HC) rsfMRI data to generate temporal correlation maps and, finally, evaluate mean strength (dFC-Str), variability (dFC-SD and ALFF) in each window, and the dwelling time. The difference in functional connectivity (FC) of the cuneus between two groups was compared using a two-sample t-test. Results: Our findings demonstrated decreased mean strength connectivity between the cuneus and calcarine, the cuneus and lingual gyrus, and between the cuneus and middle temporal gyrus (TPOmid) in subjects with SZ. Moreover, no difference was detected in variability (standard deviation and the amplitude of low-frequency fluctuation), the dwelling times of all states, or static functional connectivity (sFC) between the groups. Conclusions: Our verdict suggest that dynamic functional connectivity analyses may play crucial roles in unveiling abnormal patterns that would be obscured in static functional connectivity, providing promising impetus for understanding schizophrenia disease.
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Wahlheim CN, Christensen AP, Reagh ZM, Cassidy BS. Intrinsic functional connectivity in the default mode network predicts mnemonic discrimination: A connectome-based modeling approach. Hippocampus 2021; 32:21-37. [PMID: 34821439 DOI: 10.1002/hipo.23393] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2021] [Revised: 11/09/2021] [Accepted: 11/10/2021] [Indexed: 12/31/2022]
Abstract
The ability to distinguish existing memories from similar perceptual experiences is a core feature of episodic memory. This ability is often examined using the mnemonic similarity task in which people discriminate memories of studied objects from perceptually similar lures. Studies of the neural basis of such mnemonic discrimination have mostly focused on hippocampal function and connectivity. However, default mode network (DMN) connectivity may also support such discrimination, given that the DMN includes the hippocampus, and its connectivity supports many aspects of episodic memory. Here, we used connectome-based predictive modeling to identify associations between intrinsic DMN connectivity and mnemonic discrimination. We leveraged a wide range of abilities across healthy younger and older adults to facilitate this predictive approach. Resting-state functional connectivity in the DMN predicted mnemonic discrimination outside the MRI scanner, especially among prefrontal and temporal regions and including several hippocampal regions. This predictive relationship was stronger for younger than older adults, primarily for temporal-prefrontal connectivity. The novel associations established here are consistent with mounting evidence that broader cortical networks including the hippocampus support mnemonic discrimination. They also suggest that age-related network disruptions undermine the extent that the DMN supports this ability. This study provides the first indication of how intrinsic functional properties of the DMN support mnemonic discrimination.
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Affiliation(s)
- Christopher N Wahlheim
- Department of Psychology, University of North Carolina at Greensboro, Greensboro, North Carolina, USA
| | | | - Zachariah M Reagh
- Department of Psychological & Brain Sciences, Washington University in St. Louis, St. Louis, Missouri, USA
| | - Brittany S Cassidy
- Department of Psychology, University of North Carolina at Greensboro, Greensboro, North Carolina, USA
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43
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Hilger K, Markett S. Personality network neuroscience: Promises and challenges on the way toward a unifying framework of individual variability. Netw Neurosci 2021; 5:631-645. [PMID: 34746620 PMCID: PMC8567832 DOI: 10.1162/netn_a_00198] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/24/2020] [Accepted: 04/22/2021] [Indexed: 11/21/2022] Open
Abstract
We propose that the application of network theory to established psychological personality conceptions has great potential to advance a biologically plausible model of human personality. Stable behavioral tendencies are conceived as personality “traits.” Such traits demonstrate considerable variability between individuals, and extreme expressions represent risk factors for psychological disorders. Although the psychometric assessment of personality has more than hundred years tradition, it is not yet clear whether traits indeed represent “biophysical entities” with specific and dissociable neural substrates. For instance, it is an open question whether there exists a correspondence between the multilayer structure of psychometrically derived personality factors and the organizational properties of traitlike brain systems. After a short introduction into fundamental personality conceptions, this article will point out how network neuroscience can enhance our understanding about human personality. We will examine the importance of intrinsic (task-independent) brain connectivity networks and show means to link brain features to stable behavioral tendencies. Questions and challenges arising from each discipline itself and their combination are discussed and potential solutions are developed. We close by outlining future trends and by discussing how further developments of network neuroscience can be applied to personality research.
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Affiliation(s)
- Kirsten Hilger
- Department of Psychology I, Julius-Maximilians University Würzburg, Würzburg, Germany
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44
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Lin Q, Yoo K, Shen X, Constable TR, Chun MM. Functional Connectivity during Encoding Predicts Individual Differences in Long-Term Memory. J Cogn Neurosci 2021; 33:2279-2296. [PMID: 34272957 PMCID: PMC8497062 DOI: 10.1162/jocn_a_01759] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/04/2022]
Abstract
What is the neural basis of individual differences in the ability to hold information in long-term memory (LTM)? Here, we first characterize two whole-brain functional connectivity networks based on fMRI data acquired during an n-back task that robustly predict individual differences in two important forms of LTM, recognition and recollection. We then focus on the recognition memory model and contrast it with a working memory model. Although functional connectivity during the n-back task also predicts working memory performance and the two networks have some shared components, they are also largely distinct from each other: The recognition memory model performance remains robust when we control for working memory, and vice versa. Functional connectivity only within regions traditionally associated with LTM formation, such as the medial temporal lobe and those that show univariate subsequent memory effect, have little predictive power for both forms of LTM. Interestingly, the interactions between these regions and other brain regions play a more substantial role in predicting recollection memory than recognition memory. These results demonstrate that individual differences in LTM are dependent on the configuration of a whole-brain functional network including but not limited to regions associated with LTM during encoding and that such a network is separable from what supports the retention of information in working memory.
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Misra J, Surampudi SG, Venkatesh M, Limbachia C, Jaja J, Pessoa L. Learning brain dynamics for decoding and predicting individual differences. PLoS Comput Biol 2021; 17:e1008943. [PMID: 34478442 PMCID: PMC8445454 DOI: 10.1371/journal.pcbi.1008943] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/08/2021] [Revised: 09/16/2021] [Accepted: 08/19/2021] [Indexed: 12/04/2022] Open
Abstract
Insights from functional Magnetic Resonance Imaging (fMRI), as well as recordings of large numbers of neurons, reveal that many cognitive, emotional, and motor functions depend on the multivariate interactions of brain signals. To decode brain dynamics, we propose an architecture based on recurrent neural networks to uncover distributed spatiotemporal signatures. We demonstrate the potential of the approach using human fMRI data during movie-watching data and a continuous experimental paradigm. The model was able to learn spatiotemporal patterns that supported 15-way movie-clip classification (∼90%) at the level of brain regions, and binary classification of experimental conditions (∼60%) at the level of voxels. The model was also able to learn individual differences in measures of fluid intelligence and verbal IQ at levels comparable to that of existing techniques. We propose a dimensionality reduction approach that uncovers low-dimensional trajectories and captures essential informational (i.e., classification related) properties of brain dynamics. Finally, saliency maps and lesion analysis were employed to characterize brain-region/voxel importance, and uncovered how dynamic but consistent changes in fMRI activation influenced decoding performance. When applied at the level of voxels, our framework implements a dynamic version of multivariate pattern analysis. Our approach provides a framework for visualizing, analyzing, and discovering dynamic spatially distributed brain representations during naturalistic conditions.
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Affiliation(s)
- Joyneel Misra
- Department of Electrical and Computer Engineering, University of Maryland, College Park, Maryland, United States of America
| | - Srinivas Govinda Surampudi
- Department of Electrical and Computer Engineering, University of Maryland, College Park, Maryland, United States of America
| | - Manasij Venkatesh
- Department of Electrical and Computer Engineering, University of Maryland, College Park, Maryland, United States of America
| | - Chirag Limbachia
- Department of Psychology and Maryland Neuroimaging Center, University of Maryland, College Park, Maryland, United States of America
| | - Joseph Jaja
- Department of Electrical and Computer Engineering, University of Maryland, College Park, Maryland, United States of America
| | - Luiz Pessoa
- Department of Electrical and Computer Engineering, University of Maryland, College Park, Maryland, United States of America
- Department of Psychology and Maryland Neuroimaging Center, University of Maryland, College Park, Maryland, United States of America
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Braund TA, Breukelaar IA, Griffiths K, Tillman G, Palmer DM, Bryant R, Phillips ML, Harris AWF, Korgaonkar MS. Intrinsic Functional Connectomes Characterize Neuroticism in Major Depressive Disorder and Predict Antidepressant Treatment Outcomes. BIOLOGICAL PSYCHIATRY: COGNITIVE NEUROSCIENCE AND NEUROIMAGING 2021; 7:276-284. [PMID: 34363999 DOI: 10.1016/j.bpsc.2021.07.010] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/17/2021] [Revised: 06/18/2021] [Accepted: 07/20/2021] [Indexed: 12/28/2022]
Abstract
BACKGROUND Antidepressant efficacy in people with major depressive disorder (MDD) remains modest, yet identifying treatment predictive neurobiological markers may improve outcomes. While disruptions in functional connectivity within and between large-scale brain networks predict poorer treatment outcome, it is unclear whether higher trait neuroticism - which has been associated with generally poorer outcome - contributes to these disruptions and to antidepressant-specific treatment outcomes. Here, we used whole-brain functional connectivity analysis to identify a neural connectomic signature of neuroticism and tested whether this signature predicted antidepressant treatment outcome. METHOD Participants were 229 adults with MDD and 68 healthy controls who underwent functional MRI and were assessed on clinical features at baseline. MDD participants were then randomized to one of three commonly prescribed antidepressants and after 8 weeks completed a second functional MRI and were reassessed for depressive symptom remission/response. Baseline intrinsic functional connectivity between each pair of 436 brain regions were analysed using network-based statistics to identify connectomic features associated with neuroticism. Features were then assessed on their ability to predict treatment outcome and whether they changed after 8 weeks of treatment. RESULTS Higher baseline neuroticism was associated with greater connectivity within and between the salience, executive control, and somatomotor brain networks. Greater connectivity across these networks predicted poorer treatment outcome that was not mediated by baseline neuroticism, and connectivity strength decreased after antidepressant treatment. CONCLUSIONS Our findings demonstrate that neuroticism is associated with organization of intrinsic neural networks that predict treatment outcome, elucidating its biological underpinnings and opportunity for better treatment personalization.
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Affiliation(s)
- Taylor A Braund
- Brain Dynamics Centre, The Westmead Institute for Medical Research, Sydney, NSW, Australia; Sydney Medical School, Faculty of Medicine and Health, University of Sydney, Sydney, NSW, Australia; Total Brain, Sydney, NSW, Australia.
| | - Isabella A Breukelaar
- Brain Dynamics Centre, The Westmead Institute for Medical Research, Sydney, NSW, Australia; School of Psychology, University of New South Wales, Sydney, Australia
| | - Kristi Griffiths
- Brain Dynamics Centre, The Westmead Institute for Medical Research, Sydney, NSW, Australia
| | - Gabriel Tillman
- School of Science, Psychology and Sport, Federation University, Australia
| | - Donna M Palmer
- Brain Dynamics Centre, The Westmead Institute for Medical Research, Sydney, NSW, Australia; Total Brain, Sydney, NSW, Australia
| | - Richard Bryant
- School of Psychology, University of New South Wales, Sydney, Australia
| | - Mary L Phillips
- Department of Psychiatry, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania
| | - Anthony W F Harris
- Brain Dynamics Centre, The Westmead Institute for Medical Research, Sydney, NSW, Australia; Sydney Medical School, Faculty of Medicine and Health, University of Sydney, Sydney, NSW, Australia
| | - Mayuresh S Korgaonkar
- Brain Dynamics Centre, The Westmead Institute for Medical Research, Sydney, NSW, Australia; Sydney Medical School, Faculty of Medicine and Health, University of Sydney, Sydney, NSW, Australia; School of Health Sciences, Faculty of Medicine and Health, The University of Sydney, Sydney, NSW, Australia
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47
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Song H, Rosenberg MD. Predicting attention across time and contexts with functional brain connectivity. Curr Opin Behav Sci 2021. [DOI: 10.1016/j.cobeha.2020.12.007] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
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48
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Parkinson C. Computational methods in social neuroscience: recent advances, new tools and future directions. Soc Cogn Affect Neurosci 2021; 16:739-744. [PMID: 34101815 PMCID: PMC8343570 DOI: 10.1093/scan/nsab073] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2021] [Accepted: 06/07/2021] [Indexed: 11/30/2022] Open
Abstract
Recent years have seen a surge of exciting developments in the computational tools available to social neuroscientists. This paper highlights and synthesizes recent advances that have been enabled by the application of such tools, as well as methodological innovations likely to be of interest and utility to social neuroscientists, but that have been concentrated in other sub-fields. Papers in this special issue are emphasized—many of which contain instructive materials (e.g. tutorials and code) for researchers new to the highlighted methods. These include approaches for modeling social decisions, characterizing multivariate neural response patterns at varying spatial scales, using decoded neurofeedback to draw causal links between specific neural response patterns and psychological and behavioral phenomena, examining time-varying patterns of connectivity between brain regions, and characterizing the social networks in which social thought and behavior unfold in everyday life. By combining computational methods for characterizing participants’ rich social environments—at the levels of stimuli, paradigms and the webs of social relationships that surround people—with those for capturing the psychological processes that undergird social behavior and the wealth of information contained in neuroimaging datasets, social neuroscientists can gain new insights into how people create, understand and navigate their complex social worlds.
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Affiliation(s)
- Carolyn Parkinson
- Department of Psychology, University of California, Los Angeles, CA 90095, USA
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49
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Rutherford HJV, Potenza MN, Mayes LC, Scheinost D. The Application of Connectome-Based Predictive Modeling to the Maternal Brain: Implications for Mother-Infant Bonding. Cereb Cortex 2021; 30:1538-1547. [PMID: 31690936 DOI: 10.1093/cercor/bhz185] [Citation(s) in RCA: 17] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/11/2019] [Revised: 07/15/2019] [Accepted: 07/16/2019] [Indexed: 12/16/2022] Open
Abstract
Maternal bonding early postpartum lays an important foundation for child development. Changing brain structure and function during pregnancy and postpartum may underscore maternal bonding. We employed connectome-based predictive modeling (CPM) to measure brain functional connectivity and predict self-reported maternal bonding in mothers at 2 and 8 months postpartum. At 2 months, CPM predicted maternal anxiety in the bonding relationship: Greater integration between cerebellar and motor-sensory-auditory networks and between frontoparietal and motor-sensory-auditory networks were associated with more maternal anxiety toward their infant. Furthermore, greater segregation between the cerebellar and frontoparietal, and within the motor-sensory-auditory networks, was associated with more maternal anxiety regarding their infant. We did not observe CPM prediction of maternal bonding impairments or rejection/anger toward the infant. Finally, considering 2 and 8 months of data, changes in network connectivity were associated with changes in maternal anxiety in the bonding relationship. Our results suggest that changing connectivity among maternal brain networks may provide insight into the mother-infant bond, specifically in the context of anxiety and the representation of the infant in the mother's mind. These findings provide an opportunity to mechanistically investigate approaches to enhance the connectivity of these networks to optimize the representational and behavioral quality of the caregiving relationship.
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Affiliation(s)
| | - Marc N Potenza
- Child Study Center, Yale School of Medicine, New Haven, CT 06520, USA.,Department of Psychiatry, Yale School of Medicine, New Haven, CT 06510, USA.,Department of Neuroscience, Yale School of Medicine, New Haven, CT 06510, USA.,The Connecticut Mental Health Center, New Haven, CT 06519, USA.,The Connecticut Council on Problem Gambling, Wethersfield, CT 06109, USA
| | - Linda C Mayes
- Child Study Center, Yale School of Medicine, New Haven, CT 06520, USA
| | - Dustin Scheinost
- Child Study Center, Yale School of Medicine, New Haven, CT 06520, USA.,Radiology and Bioimaging Sciences, Yale School of Medicine, New Haven, CT, 06510, USA.,Statistics and Data Science, Yale University, New Haven, CT 06510, USA
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50
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Finn ES, Rosenberg MD. Beyond fingerprinting: Choosing predictive connectomes over reliable connectomes. Neuroimage 2021; 239:118254. [PMID: 34118397 DOI: 10.1016/j.neuroimage.2021.118254] [Citation(s) in RCA: 36] [Impact Index Per Article: 12.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/25/2021] [Revised: 05/25/2021] [Accepted: 06/07/2021] [Indexed: 12/20/2022] Open
Abstract
Recent years have seen a surge of research on variability in functional brain connectivity within and between individuals, with encouraging progress toward understanding the consequences of this variability for cognition and behavior. At the same time, well-founded concerns over rigor and reproducibility in psychology and neuroscience have led many to question whether functional connectivity is sufficiently reliable, and call for methods to improve its reliability. The thesis of this opinion piece is that when studying variability in functional connectivity-both across individuals and within individuals over time-we should use behavior prediction as our benchmark rather than optimize reliability for its own sake. We discuss theoretical and empirical evidence to compel this perspective, both when the goal is to study stable, trait-level differences between people, as well as when the goal is to study state-related changes within individuals. We hope that this piece will be useful to the neuroimaging community as we continue efforts to characterize inter- and intra-subject variability in brain function and build predictive models with an eye toward eventual real-world applications.
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Affiliation(s)
- Emily S Finn
- Department of Psychological and Brain Sciences, Dartmouth College, United States.
| | - Monica D Rosenberg
- Department of Psychology, University of Chicago, United States; Neuroscience Institute, University of Chicago, United States.
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