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Romero E, Johansson MJ, Cartwright J, Grogan G, Hayes MA. Oxalate Oxidase for In Situ H 2 O 2 -Generation in Unspecific Peroxygenase-Catalysed Drug Oxyfunctionalisations. Angew Chem Int Ed Engl 2022; 61:e202207831. [PMID: 35916874 DOI: 10.1002/anie.202207831] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/10/2022] [Indexed: 01/07/2023]
Abstract
H2 O2 -driven enzymes are of great interest for industrial biotransformations. Herein, we show for the first time that oxalate oxidase (OXO) is an efficient in situ source of H2 O2 for one of these biocatalysts, which is known as unspecific peroxygenase (UPO). OXO is reasonably robust, produces only CO2 as a by-product and uses oxalate as a cheap sacrificial electron donor. UPO has significant potential as an industrial catalyst for selective C-H oxyfunctionalisations, as we confirm herein by testing a diverse drug panel using miniaturised high-throughput assays and mass spectrometry. 33 out of 64 drugs were converted in 5 μL-scale reactions by the UPO with OXO (conversion >70 % for 11 drugs). Furthermore, oxidation of the drug tolmetin was achieved on a 50 mg scale (TONUPO 25 664) with 84 % yield, which was further improved via enzyme immobilization. This one-pot approach ensures adequate H2 O2 levels, enabling rapid access to industrially relevant molecules that are difficult to obtain by other routes.
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Affiliation(s)
- Elvira Romero
- Compound Synthesis and Management, Discovery Sciences, BioPharmaceuticals R&D, AstraZeneca, Pepparedsleden 1, 43183, Mölndal, Sweden
| | - Magnus J Johansson
- Medicinal Chemistry, Research and Early Development, Cardiovascular, Renal and Metabolism (CVRM), BioPharmaceuticals R&D, AstraZeneca, Pepparedsleden 1, 43183, Mölndal, Sweden.,Department of Organic Chemistry, Stockholm University, Svante Arrhenius väg 16 C, 10691, Stockholm, Sweden
| | - Jared Cartwright
- Department of Biology, University of York, Heslington, York YO10 5DD, UK
| | - Gideon Grogan
- Department of Chemistry, University of York, Heslington, York YO10 5DD, UK
| | - Martin A Hayes
- Compound Synthesis and Management, Discovery Sciences, BioPharmaceuticals R&D, AstraZeneca, Pepparedsleden 1, 43183, Mölndal, Sweden
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2
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Romero E, Johansson MJ, Cartwright J, Grogan G, Hayes MA. Oxalate Oxidase for In Situ H2O2‐generation in Unspecific Peroxygenase‐Catalysed Drug Oxyfunctionalisations. Angew Chem Int Ed Engl 2022. [DOI: 10.1002/ange.202207831] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Elvira Romero
- AstraZeneca Sweden: AstraZeneca AB Discovery Sciences SWEDEN
| | - Magnus J. Johansson
- AstraZeneca Sweden: AstraZeneca AB Medicinal Chemistry, Research and Early Development, Cardiovascular, Renal and Metabolism SWEDEN
| | | | - Gideon Grogan
- University of York Department of Chemistry UNITED KINGDOM
| | - Martin Alistair Hayes
- AstraZeneca Sweden: AstraZeneca AB Discovery Sciences Pepparedsleden 1 43183 Molndal SWEDEN
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3
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Yu YY, Si FJ, Wang N, Wang T, Jin Y, Zheng Y, Yang W, Luo YM, Niu DD, Guo JH, Jiang CH. Bacillus-Secreted Oxalic Acid Induces Tomato Resistance Against Gray Mold Disease Caused by Botrytis cinerea by Activating the JA/ET Pathway. MOLECULAR PLANT-MICROBE INTERACTIONS : MPMI 2022; 35:659-671. [PMID: 36043906 DOI: 10.1094/mpmi-11-21-0289-r] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/15/2023]
Abstract
Bacillus spp. are known for their ability to control plant diseases; however, the mechanism of disease control by Bacillus spp. is still unclear. Previously, bacterial organic acids have been implicated in the process of disease suppression. We extracted the total organic acid from Bacillus cereus AR156 culture filtrate and identified oxalic acid (OA) as the programmed cell death-inducing factor. OA strongly suppressed the lesion caused by Botrytis cinerea without significant antagonism against the fungus. Low concentration of OA produced by Bacillus spp. inhibited cell death caused by high concentrations of OA in a concentration- and time-dependent manner. Pretreatment with a low concentration of OA led to higher accumulation of active oxygen-scavenging enzymes in tomato leaves and provoked the expression of defense-related genes. The activation of gene expression relied on the jasmonic acid (JA) signaling pathway but not the salicylic acid (SA) pathway. The disease suppression capacity of OA was confirmed on wild-type tomato and its SA accumulation-deficient line, while the control effect was diminished in JA synthesis-deficient mutant, suggesting that the OA-triggered resistance relied on JA and ethylene (ET) signaling transduction. OA secretion ability was widely distributed among the tested Bacillus strains and the final environmental OA concentration was under strict regulation by a pH-sensitive degradation mechanism. This study provides the first systematic analysis on the role of low-concentration OA secreted and maintained by Bacillus spp. in suppression of gray mold disease and determines the dependence of OA-mediated resistance on the JA/ET signaling pathway. [Formula: see text] The author(s) have dedicated the work to the public domain under the Creative Commons CC0 "No Rights Reserved" license by waiving all of his or her rights to the work worldwide under copyright law, including all related and neighboring rights, to the extent allowed by law, 2022.
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Affiliation(s)
- Yi-Yang Yu
- Department of Plant Pathology, College of Plant Protection, Nanjing Agricultural University, Nanjing 210095, China
- Key Laboratory of Integrated Management of Crop Disease and Pests, Ministry of Education/Key Laboratory of Integrated Pest Management on Crops in East China, Ministry of Agriculture/Key Laboratory of Plant Immunity, Nanjing Agricultural University, Nanjing 210095, China
- Engineering Center of Bioresource Pesticide in Jiangsu Province, Nanjing 210095, China
| | - Fang-Jie Si
- Department of Plant Pathology, College of Plant Protection, Nanjing Agricultural University, Nanjing 210095, China
- Key Laboratory of Integrated Management of Crop Disease and Pests, Ministry of Education/Key Laboratory of Integrated Pest Management on Crops in East China, Ministry of Agriculture/Key Laboratory of Plant Immunity, Nanjing Agricultural University, Nanjing 210095, China
- Engineering Center of Bioresource Pesticide in Jiangsu Province, Nanjing 210095, China
| | - Ning Wang
- Department of Plant Pathology, College of Plant Protection, Nanjing Agricultural University, Nanjing 210095, China
- Key Laboratory of Integrated Management of Crop Disease and Pests, Ministry of Education/Key Laboratory of Integrated Pest Management on Crops in East China, Ministry of Agriculture/Key Laboratory of Plant Immunity, Nanjing Agricultural University, Nanjing 210095, China
- Engineering Center of Bioresource Pesticide in Jiangsu Province, Nanjing 210095, China
| | - Ting Wang
- Department of Plant Pathology, College of Plant Protection, Nanjing Agricultural University, Nanjing 210095, China
- Key Laboratory of Integrated Management of Crop Disease and Pests, Ministry of Education/Key Laboratory of Integrated Pest Management on Crops in East China, Ministry of Agriculture/Key Laboratory of Plant Immunity, Nanjing Agricultural University, Nanjing 210095, China
- Engineering Center of Bioresource Pesticide in Jiangsu Province, Nanjing 210095, China
| | - Yu Jin
- Department of Plant Pathology, College of Plant Protection, Nanjing Agricultural University, Nanjing 210095, China
- Key Laboratory of Integrated Management of Crop Disease and Pests, Ministry of Education/Key Laboratory of Integrated Pest Management on Crops in East China, Ministry of Agriculture/Key Laboratory of Plant Immunity, Nanjing Agricultural University, Nanjing 210095, China
- Engineering Center of Bioresource Pesticide in Jiangsu Province, Nanjing 210095, China
| | - Ying Zheng
- Department of Plant Pathology, College of Plant Protection, Nanjing Agricultural University, Nanjing 210095, China
- Key Laboratory of Integrated Management of Crop Disease and Pests, Ministry of Education/Key Laboratory of Integrated Pest Management on Crops in East China, Ministry of Agriculture/Key Laboratory of Plant Immunity, Nanjing Agricultural University, Nanjing 210095, China
- Engineering Center of Bioresource Pesticide in Jiangsu Province, Nanjing 210095, China
| | - Wei Yang
- Jiangsu Key Laboratory for Eco-Agricultural Biotechnology around Hongze Lake, Huaiyin Normal University, Huai'an 223300, China
- Jiangsu Collaborative Innovation Center of Regional Modern Agriculture and Environmental Protection, Huaiyin Normal University, Huai'an 223300, China
| | - Yu-Ming Luo
- Jiangsu Key Laboratory for Eco-Agricultural Biotechnology around Hongze Lake, Huaiyin Normal University, Huai'an 223300, China
- Jiangsu Collaborative Innovation Center of Regional Modern Agriculture and Environmental Protection, Huaiyin Normal University, Huai'an 223300, China
| | - Dong-Dong Niu
- Department of Plant Pathology, College of Plant Protection, Nanjing Agricultural University, Nanjing 210095, China
- Key Laboratory of Integrated Management of Crop Disease and Pests, Ministry of Education/Key Laboratory of Integrated Pest Management on Crops in East China, Ministry of Agriculture/Key Laboratory of Plant Immunity, Nanjing Agricultural University, Nanjing 210095, China
- Engineering Center of Bioresource Pesticide in Jiangsu Province, Nanjing 210095, China
| | - Jian-Hua Guo
- Department of Plant Pathology, College of Plant Protection, Nanjing Agricultural University, Nanjing 210095, China
- Key Laboratory of Integrated Management of Crop Disease and Pests, Ministry of Education/Key Laboratory of Integrated Pest Management on Crops in East China, Ministry of Agriculture/Key Laboratory of Plant Immunity, Nanjing Agricultural University, Nanjing 210095, China
- Engineering Center of Bioresource Pesticide in Jiangsu Province, Nanjing 210095, China
| | - Chun-Hao Jiang
- Department of Plant Pathology, College of Plant Protection, Nanjing Agricultural University, Nanjing 210095, China
- Key Laboratory of Integrated Management of Crop Disease and Pests, Ministry of Education/Key Laboratory of Integrated Pest Management on Crops in East China, Ministry of Agriculture/Key Laboratory of Plant Immunity, Nanjing Agricultural University, Nanjing 210095, China
- Engineering Center of Bioresource Pesticide in Jiangsu Province, Nanjing 210095, China
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Derbyshire MC, Newman TE, Khentry Y, Owolabi Taiwo A. The evolutionary and molecular features of the broad-host-range plant pathogen Sclerotinia sclerotiorum. MOLECULAR PLANT PATHOLOGY 2022; 23:1075-1090. [PMID: 35411696 PMCID: PMC9276942 DOI: 10.1111/mpp.13221] [Citation(s) in RCA: 25] [Impact Index Per Article: 12.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/09/2021] [Revised: 03/09/2022] [Accepted: 03/25/2022] [Indexed: 05/21/2023]
Abstract
Sclerotinia sclerotiorum is a pathogenic fungus that infects hundreds of plant species, including many of the world's most important crops. Key features of S. sclerotiorum include its extraordinary host range, preference for dicotyledonous plants, relatively slow evolution, and production of protein effectors that are active in multiple host species. Plant resistance to this pathogen is highly complex, typically involving numerous polymorphisms with infinitesimally small effects, which makes resistance breeding a major challenge. Due to its economic significance, S. sclerotiorum has been subjected to a large amount of molecular and evolutionary research. In this updated pathogen profile, we review the evolutionary and molecular features of S. sclerotiorum and discuss avenues for future research into this important species.
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Affiliation(s)
- Mark C. Derbyshire
- Centre for Crop and Disease ManagementSchool of Molecular and Life SciencesCurtin UniversityPerthWestern AustraliaAustralia
| | - Toby E. Newman
- Centre for Crop and Disease ManagementSchool of Molecular and Life SciencesCurtin UniversityPerthWestern AustraliaAustralia
| | - Yuphin Khentry
- Centre for Crop and Disease ManagementSchool of Molecular and Life SciencesCurtin UniversityPerthWestern AustraliaAustralia
| | - Akeem Owolabi Taiwo
- Centre for Crop and Disease ManagementSchool of Molecular and Life SciencesCurtin UniversityPerthWestern AustraliaAustralia
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Rollano-Peñaloza OM, Mollinedo PA, Widell S, Rasmusson AG. Transcriptomic Analysis of Quinoa Reveals a Group of Germin-Like Proteins Induced by Trichoderma. FRONTIERS IN FUNGAL BIOLOGY 2021; 2:768648. [PMID: 37744129 PMCID: PMC10512214 DOI: 10.3389/ffunb.2021.768648] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/01/2021] [Accepted: 11/04/2021] [Indexed: 09/26/2023]
Abstract
Symbiotic strains of fungi in the genus Trichoderma affect growth and pathogen resistance of many plant species, but the interaction is not known in molecular detail. Here we describe the transcriptomic response of two cultivars of the crop Chenopodium quinoa to axenic co-cultivation with Trichoderma harzianum BOL-12 and Trichoderma afroharzianum T22. The response of C. quinoa roots to BOL-12 and T22 in the early phases of interaction was studied by RNA sequencing and RT-qPCR verification. Interaction with the two fungal strains induced partially overlapping gene expression responses. Comparing the two plant genotypes, a broad spectrum of putative quinoa defense genes were found activated in the cultivar Kurmi but not in the Real cultivar. In cultivar Kurmi, relatively small effects were observed for classical pathogen response pathways but instead a C. quinoa-specific clade of germin-like genes were activated. Germin-like genes were found to be more rapidly induced in cultivar Kurmi as compared to Real. The same germin-like genes were found to also be upregulated systemically in the leaves. No strong correlation was observed between any of the known hormone-mediated defense response pathways and any of the quinoa-Trichoderma interactions. The differences in responses are relevant for the capabilities of applying Trichoderma agents for crop protection of different cultivars of C. quinoa.
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Affiliation(s)
- Oscar M. Rollano-Peñaloza
- Instituto de Investigaciones Quimicas, Universidad Mayor de San Andrés, La Paz, Bolivia
- Department of Biology, Lund University, Lund, Sweden
| | - Patricia A. Mollinedo
- Instituto de Investigaciones Quimicas, Universidad Mayor de San Andrés, La Paz, Bolivia
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Dong J, Zhou L, Feng A, Zhang S, Fu H, Chen L, Zhao J, Yang T, Yang W, Ma Y, Wang J, Zhu X, Liu Q, Liu B. The OsOXO2, OsOXO3 and OsOXO4 Positively Regulate Panicle Blast Resistance in Rice. RICE (NEW YORK, N.Y.) 2021; 14:51. [PMID: 34091752 PMCID: PMC8179873 DOI: 10.1186/s12284-021-00494-9] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/24/2020] [Accepted: 05/17/2021] [Indexed: 05/05/2023]
Abstract
BACKGROUND Although panicle blast is more destructive to yield loss than leaf blast in rice, the cloned genes that function in panicle blast resistance are still very limited and the molecular mechanisms underlying panicle blast resistance remain largely unknown. RESULTS In the present study, we have confirmed that the three Oxalate oxidase (OXO) genes, OsOXO2, OsOXO3 and OsOXO4 from a blast-resistant cultivar BC10 function in panicle blast resistance in rice. The expression of OsOXO2, OsOXO3 and OsOXO4 were induced by panicle blast inoculation. Subcellular localization analysis revealed that the three OXO proteins are all localized in the nucleus and cytoplasm. Simultaneous silencing of OsOXO2, OsOXO3 and OsOXO4 decreased rice resistance to panicle blast, whereas the OsOXO2, OsOXO3 and OsOXO4 overexpression rice plants individually showed enhanced panicle blast resistance. More H2O2 and higher expression levels of PR genes were observed in the overexpressing plants than in the control plants, while the silencing plants exhibited less H2O2 and lower expression levels of PR genes compared to the control plants. Moreover, phytohormone treatment and the phytohormone signaling related gene expression analysis showed that panicle blast resistance mediated by the three OXO genes was associated with the activation of JA and ABA signaling pathways but suppression of SA signaling pathway. CONCLUSION OsOXO2, OsOXO3 and OsOXO4 positively regulate panicle blast resistance in rice. The OXO genes could modulate the accumulation of H2O2 and expression levels of PR gene in plants. Moreover, the OXO genes mediated panicle blast resistance could be regulated by ABA, SA and JA, and may be associated with the activation of JA and ABA signaling pathways but suppression of the SA signaling pathway.
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Affiliation(s)
- Jingfang Dong
- Rice Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou, 510640 China
- Guangdong Key Laboratory of New Technology in Rice Breeding, Guangzhou, 510640 China
| | - Lian Zhou
- Rice Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou, 510640 China
- Guangdong Key Laboratory of New Technology in Rice Breeding, Guangzhou, 510640 China
| | - Aiqing Feng
- Guangdong Key Laboratory of New Technology in Plant Protection, Plant Protection Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou, 510640 China
| | - Shaohong Zhang
- Rice Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou, 510640 China
- Guangdong Key Laboratory of New Technology in Rice Breeding, Guangzhou, 510640 China
| | - Hua Fu
- Rice Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou, 510640 China
- Guangdong Key Laboratory of New Technology in Rice Breeding, Guangzhou, 510640 China
| | - Luo Chen
- Rice Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou, 510640 China
- Guangdong Key Laboratory of New Technology in Rice Breeding, Guangzhou, 510640 China
| | - Junliang Zhao
- Rice Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou, 510640 China
- Guangdong Key Laboratory of New Technology in Rice Breeding, Guangzhou, 510640 China
| | - Tifeng Yang
- Rice Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou, 510640 China
- Guangdong Key Laboratory of New Technology in Rice Breeding, Guangzhou, 510640 China
| | - Wu Yang
- Rice Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou, 510640 China
- Guangdong Key Laboratory of New Technology in Rice Breeding, Guangzhou, 510640 China
| | - Yamei Ma
- Rice Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou, 510640 China
- Guangdong Key Laboratory of New Technology in Rice Breeding, Guangzhou, 510640 China
| | - Jian Wang
- Rice Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou, 510640 China
- Guangdong Key Laboratory of New Technology in Rice Breeding, Guangzhou, 510640 China
| | - Xiaoyuan Zhu
- Guangdong Key Laboratory of New Technology in Plant Protection, Plant Protection Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou, 510640 China
| | - Qing Liu
- Rice Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou, 510640 China
- Guangdong Key Laboratory of New Technology in Rice Breeding, Guangzhou, 510640 China
| | - Bin Liu
- Rice Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou, 510640 China
- Guangdong Key Laboratory of New Technology in Rice Breeding, Guangzhou, 510640 China
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7
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Yang X, Yang J, Li H, Niu L, Xing G, Zhang Y, Xu W, Zhao Q, Li Q, Dong Y. Overexpression of the chitinase gene CmCH1 from Coniothyrium minitans renders enhanced resistance to Sclerotinia sclerotiorum in soybean. Transgenic Res 2020; 29:187-198. [PMID: 31970612 DOI: 10.1007/s11248-020-00190-2] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/17/2019] [Accepted: 01/09/2020] [Indexed: 10/25/2022]
Abstract
Pathogenic fungi represent one of the major biotic stresses for soybean production across the world. Sclerotinia sclerotiorum, the causal agent of Sclerotinia stem rot, is a devastating fungal pathogen that is responsible for significant yield losses in soybean. In this study, the chitinase gene CmCH1, from the mycoparasitic fungus Coniothyrium minitans, which infects a range of ascomycetous sclerotia, including S. sclerotiorum and S. minor, was introduced into soybean. Transgenic plants expressing CmCH1 showed higher resistance to S. sclerotiorum infection, with significantly reduced lesion sizes in both detached stem and leaf assays, compared to the non-transformed control. Increased hydrogen peroxide content and activities of defense-responsive enzymes, such as peroxidase, superoxide dismutase, phenylalanine ammonia lyase, and polyphenoloxidase were also observed at the infection sites in the transgenic plants inoculated with S. sclerotiorum. Consistent with the role of chitinases in inducing downstream defense responses by the release of elicitors, several defense-related genes, such as GmNPR2, GmSGT-1, GmRAR1, GmPR1, GmPR3, GmPR12, GmPAL, GmAOS, GmPPO, were also significantly upregulated in the CmCH1-expressing soybean after inoculation. Collectively, our results demonstrate that overexpression of CmCH1 led to increased accumulation of H2O2 and up-regulation of defense-related genes and enzymes, and thus enhanced resistance to S. sclerotiorum infection while showing no detrimental effects on growth and development of soybean plants.
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Affiliation(s)
- Xiangdong Yang
- Jilin Provincial Key Laboratory of Agricultural Biotechnology, Jilin Academy of Agricultural Sciences, Changchun, 130033, China
| | - Jing Yang
- Jilin Provincial Key Laboratory of Agricultural Biotechnology, Jilin Academy of Agricultural Sciences, Changchun, 130033, China
| | - Haiyun Li
- Jilin Provincial Key Laboratory of Agricultural Biotechnology, Jilin Academy of Agricultural Sciences, Changchun, 130033, China
| | - Lu Niu
- Jilin Provincial Key Laboratory of Agricultural Biotechnology, Jilin Academy of Agricultural Sciences, Changchun, 130033, China
| | - Guojie Xing
- Jilin Provincial Key Laboratory of Agricultural Biotechnology, Jilin Academy of Agricultural Sciences, Changchun, 130033, China
| | - Yuanyu Zhang
- Jilin Provincial Key Laboratory of Agricultural Biotechnology, Jilin Academy of Agricultural Sciences, Changchun, 130033, China
| | - Wenjing Xu
- Jilin Provincial Key Laboratory of Agricultural Biotechnology, Jilin Academy of Agricultural Sciences, Changchun, 130033, China
| | - Qianqian Zhao
- Jilin Provincial Key Laboratory of Agricultural Biotechnology, Jilin Academy of Agricultural Sciences, Changchun, 130033, China
| | - Qiyun Li
- Jilin Provincial Key Laboratory of Agricultural Biotechnology, Jilin Academy of Agricultural Sciences, Changchun, 130033, China.
| | - Yingshan Dong
- Jilin Provincial Key Laboratory of Agricultural Biotechnology, Jilin Academy of Agricultural Sciences, Changchun, 130033, China.
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Ilyas M, Irfan M, Mahmood T, Hussain H, Latif-ur-Rehman, Naeem I, Khaliq-ur-Rahman. Analysis of Germin-like Protein Genes (OsGLPs) Family in Rice Using Various In silico Approaches. Curr Bioinform 2020. [DOI: 10.2174/1574893614666190722165130] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
Abstract
Background:
Germin-like Proteins (GLPs) play an important role in various stresses.
Rice contains 43 GLPs, among which many remain functionally unexplored. The computational
analysis will provide significant insight into their function.
Objective:
To find various structural properties, functional importance, phylogeny and expression
pattern of all OsGLPs using various bioinformatics tools.
Methods:
Physiochemical properties, sub-cellular localization, domain composition, Nglycosylation
and Phosphorylation sites, and 3D structural models of the OsGLPs were predicted
using various bioinformatics tools. Functional analysis was carried out with the Search Tool for
the Retrieval of Interacting Genes/Proteins (STRING) and Blast2GO servers. The expression
profile of the OsGLPs was predicted by retrieving the data for expression values from tissuespecific
and hormonal stressed array libraries of RiceXPro. Their phylogenetic relationship was
computed using Molecular and Evolutionary Genetic Analysis (MEGA6) tool.
Results:
Most of the OsGLPs are stable in the cellular environment with a prominent expression in
the extracellular region (57%) and plasma membrane (33%). Besides, 3 basic cupin domains, 7
more were reported, among which NTTNKVGSNVTLINV, FLLAALLALASWQAI, and
MASSSF were common to 99% of the sequences, related to bacterial pathogenicity, peroxidase
activity, and peptide signal activity, respectively. Structurally, OsGLPs are similar but functionally
they are diverse with novel enzymatic activities of oxalate decarboxylase, lyase, peroxidase, and
oxidoreductase. Expression analysis revealed prominent activities in the root, endosperm, and
leaves. OsGLPs were strongly expressed by abscisic acid, auxin, gibberellin, cytokinin, and
brassinosteroid. Phylogenetically they showed polyphyletic origin with a narrow genetic
background of 0.05%. OsGLPs of chromosome 3, 8, and 12 are functionally more important due to
their defensive role against various stresses through co-expression strategy.
Conclusion:
The analysis will help to utilize OsGLPs in future food programs.
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Affiliation(s)
- Muhammad Ilyas
- Department of Botany, University of Swabi, Swabi-23561, Khyber Pakhtunkhwa, Pakistan
| | - Muhammad Irfan
- Department of Botany, University of Swabi, Swabi-23561, Khyber Pakhtunkhwa, Pakistan
| | - Tariq Mahmood
- Department of Botany, Faculty of Biological Sciences, Quaid-I-Azam University, Islamabad 45320, Pakistan
| | - Hazrat Hussain
- Department of Biotechnology, University of Swabi, Swabi-23561, Khyber Pakhtunkhwa, Pakistan
| | - Latif-ur-Rehman
- Department of Biotechnology, University of Swabi, Swabi-23561, Khyber Pakhtunkhwa, Pakistan
| | - Ijaz Naeem
- Department of Biotechnology, University of Swabi, Swabi-23561, Khyber Pakhtunkhwa, Pakistan
| | - Khaliq-ur-Rahman
- Department of Chemistry, University of Swabi, Swabi-23561, Khyber Pakhtunkhwa, Pakistan
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9
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Grey mould control by oxalate degradation using non-antifungal Pseudomonas abietaniphila strain ODB36. Sci Rep 2020; 10:1605. [PMID: 32005892 PMCID: PMC6994688 DOI: 10.1038/s41598-020-58609-z] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/16/2019] [Accepted: 01/17/2020] [Indexed: 12/14/2022] Open
Abstract
Grey mould is an important necrotrophic fungal pathogen that causes huge economic losses in agriculture. Many types of bacteria are used for biological control of grey mould via competition for space or nutrients and/or the production of antifungal metabolites. Oxalate is a key component of virulent necrotic fungal pathogens. In this study, we isolated non-antifungal oxalate-degrading bacteria (ODB) from the surfaces of oxalate-rich spinach and strawberries to investigate their ability to control necrotic fungal pathogens such as grey mould. A total of 36 bacteria grown on oxalate minimal (OM) agar plates were tested for oxalate-degrading activity. Five isolates exhibiting the highest oxalate degradation activity were subjected to molecular identification using 16S rRNA gene sequencing. Two isolates exhibiting non-antifungal activity were subjected to disease suppression assays using Arabidopsis–Botrytis systems. The isolate Pseudomonas abietaniphila ODB36, which exhibited significant plant protective ability, was finally selected for further investigation. Based on whole-genome information, the pseudomonad oxalate degrading (podA) gene, which encodes formyl-CoA transferase, was analysed. The podA− mutant did not inhibit Botrytis infection and oxalate toxicity; the defects were recovered by podA complementation. Purified PodA–His converted oxalate to formate and eliminated oxalate toxicity. These results indicate that P. abietaniphila ODB36 and PodA enzyme are associated with various aspects of grey mould disease inhibitory effects.
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10
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Kumar V, Irfan M, Datta A. Manipulation of oxalate metabolism in plants for improving food quality and productivity. PHYTOCHEMISTRY 2019; 158:103-109. [PMID: 30500595 DOI: 10.1016/j.phytochem.2018.10.029] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/07/2018] [Revised: 10/23/2018] [Accepted: 10/26/2018] [Indexed: 05/25/2023]
Abstract
Oxalic acid is a naturally occurring metabolite in plants and a common constituent of all plant-derived human diets. Oxalic acid has diverse unrelated roles in plant metabolism, including pH regulation in association with nitrogen metabolism, metal ion homeostasis and calcium storage. In plants, oxalic acid is also a pathogenesis factor and is secreted by various fungi during host infection. Unlike those of plants, fungi and bacteria, the human genome does not contain any oxalate-degrading genes, and therefore, the consumption of large amounts of plant-derived oxalate is considered detrimental to human health. In this review, we discuss recent biotechnological approaches that have been used to reduce the oxalate content of plant tissues.
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Affiliation(s)
- Vinay Kumar
- National Institute of Plant Genome Research, New Delhi, 110067, India
| | - Mohammad Irfan
- National Institute of Plant Genome Research, New Delhi, 110067, India
| | - Asis Datta
- National Institute of Plant Genome Research, New Delhi, 110067, India.
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11
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Yang X, Yang J, Wang Y, He H, Niu L, Guo D, Xing G, Zhao Q, Zhong X, Sui L, Li Q, Dong Y. Enhanced resistance to sclerotinia stem rot in transgenic soybean that overexpresses a wheat oxalate oxidase. Transgenic Res 2019; 28:103-114. [PMID: 30478526 DOI: 10.1007/s11248-018-0106-x] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/26/2018] [Accepted: 11/21/2018] [Indexed: 12/14/2022]
Abstract
Sclerotinia stem rot (SSR), caused by the oxalate-secreting necrotrophic fungal pathogen Sclerotinia sclerotiorum, is one of the devastating diseases that causes significant yield loss in soybean (Glycine max). Until now, effective control of the pathogen is greatly limited by a lack of strong resistance in available commercial soybean cultivars. In this study, transgenic soybean plants overexpressing an oxalic acid (OA)-degrading oxalate oxidase gene OXO from wheat were generated and evaluated for their resistance to S. sclerotiorum. Integration and expression of the transgene were confirmed by Southern and western blot analyses. As compared with non-transformed (NT) control plants, the transgenic lines with increased oxalate oxidase activity displayed significantly reduced lesion sizes, i.e., by 58.71-82.73% reduction of lesion length in a detached stem assay (T3 and T4 generations) and 76.67-82.0% reduction of lesion area in a detached leaf assay (T4 generation). The transgenic plants also showed increased tolerance to the externally applied OA (60 mM) relative to the NT controls. Consecutive resistance evaluation further confirmed an enhanced and stable resistance to S. sclerotiorum in the T3 and T4 transgenic lines. Similarly, decreased OA content and increased hydrogen peroxide (H2O2) levels were also observed in the transgenic leaves after S. sclerotiorum inoculation. Quantitative real-time polymerase chain reaction analysis revealed that the expression level of OXO reached a peak at 1 h and 4 h after inoculation with S. sclerotiorum. In parallel, a significant up-regulation of the hypersensitive response-related genes GmNPR1-1, GmNPR1-2, GmSGT1, and GmRAR occurred, eventually induced by increased release of H2O2 at the infection sites. Interestingly, other defense-related genes such as salicylic acid-dependent genes (GmPR1, GmPR2, GmPR3, GmPR5, GmPR12 and GmPAL), and ethylene/jasmonic acid-dependent genes (GmAOS, GmPPO) also exhibited higher expression levels in the transgenic plants than in the NT controls. Our results demonstrated that overexpression of OXO enhances SSR resistance by degrading OA secreted by S. sclerotiorum and increasing H2O2 levels, and eliciting defense responses mediated by multiple signaling pathways.
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Affiliation(s)
- Xiangdong Yang
- Jilin Provincial Key Laboratory of Agricultural Biotechnology, Jilin Academy of Agricultural Sciences, Changchun, 130033, China
| | - Jing Yang
- Jilin Provincial Key Laboratory of Agricultural Biotechnology, Jilin Academy of Agricultural Sciences, Changchun, 130033, China
| | - Yisheng Wang
- Jilin Provincial Key Laboratory of Agricultural Biotechnology, Jilin Academy of Agricultural Sciences, Changchun, 130033, China
| | - Hongli He
- Jilin Provincial Key Laboratory of Agricultural Biotechnology, Jilin Academy of Agricultural Sciences, Changchun, 130033, China
| | - Lu Niu
- Jilin Provincial Key Laboratory of Agricultural Biotechnology, Jilin Academy of Agricultural Sciences, Changchun, 130033, China
| | - Dongquan Guo
- Jilin Provincial Key Laboratory of Agricultural Biotechnology, Jilin Academy of Agricultural Sciences, Changchun, 130033, China
| | - Guojie Xing
- Jilin Provincial Key Laboratory of Agricultural Biotechnology, Jilin Academy of Agricultural Sciences, Changchun, 130033, China
| | - Qianqian Zhao
- Jilin Provincial Key Laboratory of Agricultural Biotechnology, Jilin Academy of Agricultural Sciences, Changchun, 130033, China
| | - Xiaofang Zhong
- Jilin Provincial Key Laboratory of Agricultural Biotechnology, Jilin Academy of Agricultural Sciences, Changchun, 130033, China
| | - Li Sui
- Jilin Provincial Key Laboratory of Agricultural Biotechnology, Jilin Academy of Agricultural Sciences, Changchun, 130033, China
| | - Qiyun Li
- Jilin Provincial Key Laboratory of Agricultural Biotechnology, Jilin Academy of Agricultural Sciences, Changchun, 130033, China.
| | - Yingshan Dong
- Jilin Provincial Key Laboratory of Agricultural Biotechnology, Jilin Academy of Agricultural Sciences, Changchun, 130033, China.
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12
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Gantait S, Mondal S. Transgenic approaches for genetic improvement in groundnut ( Arachis hypogaea L.) against major biotic and abiotic stress factors. J Genet Eng Biotechnol 2018; 16:537-544. [PMID: 30733771 PMCID: PMC6354002 DOI: 10.1016/j.jgeb.2018.08.005] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/22/2018] [Revised: 07/17/2018] [Accepted: 08/29/2018] [Indexed: 01/11/2023]
Abstract
Cultivated groundnut (Arachis hypogaea L.) is considered as one of the primary oilseed crops and a major fodder for cattle industry in most of the developing countries, owing to its rich source of protein. It is due to its geocarpic nature of growth that the overall yield performance of groundnut is hindered by several biotic and abiotic stress factors. Multidimensional attempts were undertaken to combat these factors by developing superior groundnut varieties, modified with integral mechanism of tolerance/resistance; however this approach proved to be futile, owing to inferior pod and kernel quality. As a superior alternative, biotechnological intervention like transformation of foreign genes, either directly (biolistic) or via Agrobacterium, significantly aided in the development of advanced groundnut genotypes equipped with integral resistance against stresses and enhanced yield attributing traits. Several genes triggered by biotic and abiotic stresses, were detected and some of them were cloned and transformed as major parts of transgenic programmes. Application of modern molecular biological techniques, in designing biotic and abiotic stress tolerant/resistant groundnut varieties that exhibited mechanisms of resistance, relied on the expression of specific genes associated to particular stress. The genetically transformed stress tolerant groundnut varieties possess the potential to be employed as donor parents in traditional breeding programmes for developing varieties that are resilient to fungal, bacterial, and viral diseases, as well as to draught and salinity. The present review emphasizes on the retrospect and prospect of genetic transformation tools, implemented for the enhancement of groundnut varieties against key biotic and abiotic stress factors.
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Affiliation(s)
- Saikat Gantait
- All India Coordinated Research Project on Groundnut, Directorate of Research, Bidhan Chandra Krishi Viswavidyalaya, Kalyani, Nadia, West Bengal 741235, India
- Department of Genetics and Plant Breeding, Faculty of Agriculture, Bidhan Chandra Krishi Viswavidyalaya, Mohanpur, Nadia, West Bengal 741252, India
| | - Suvendu Mondal
- Nuclear Agriculture and Biotechnology Division, Bhabha Atomic Research Centre, Mumbai 400085, Maharashtra, India
- Homi Bhabha National Institute, Training School Complex, Anushaktinagar, Mumbai 400094, Maharashtra, India
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13
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Floryszak-Wieczorek J, Arasimowicz-Jelonek M. Contrasting Regulation of NO and ROS in Potato Defense-Associated Metabolism in Response to Pathogens of Different Lifestyles. PLoS One 2016; 11:e0163546. [PMID: 27695047 PMCID: PMC5047594 DOI: 10.1371/journal.pone.0163546] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2016] [Accepted: 09/09/2016] [Indexed: 12/20/2022] Open
Abstract
Our research provides new insights into how the low and steady-state levels of nitric oxide (NO) and reactive oxygen species (ROS) in potato leaves are altered after the challenge with the hemibiotroph Phytophthora infestans or the necrotroph Botrytis cinerea, with the subsequent rapid and invader-dependent modification of defense responses with opposite effects. Mainly in the avirulent (avr) P. infestans–potato system, NO well balanced with the superoxide level was tuned with a battery of SA-dependent defense genes, leading to the establishment of the hypersensitive response (HR) successfully arresting the pathogen. Relatively high levels of S-nitrosoglutathione and S-nitrosothiols concentrated in the main vein of potato leaves indicated the mobile function of these compounds as a reservoir of NO bioactivity. In contrast, low-level production of NO and ROS during virulent (vr) P. infestans-potato interactions might be crucial in the delayed up-regulation of PR-1 and PR-3 genes and compromised resistance to the hemibiotrophic pathogen. In turn, B. cinerea triggered huge NO overproduction and governed inhibition of superoxide production by blunting NADPH oxidase. Nevertheless, a relatively high level of H2O2 was found owing to the germin-like activity in cooperation with NO-mediated HR-like cell death in potato genotypes favorable to the necrotrophic pathogen. Moreover, B. cinerea not only provoked cell death, but also modulated the host redox milieu by boosting protein nitration, which attenuated SA production but not SA-dependent defense gene expression. Finally, based on obtained data the organismal cost of having machinery for HR in plant resistance to biotrophs is also discussed, while emphasizing new efforts to identify other components of the NO/ROS cell death pathway and improve plant protection against pathogens of different lifestyles.
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Affiliation(s)
| | - Magdalena Arasimowicz-Jelonek
- Department of Plant Ecophysiology, Faculty of Biology, Adam Mickiewicz University, Umultowska 89, 61–614 Poznan, Poland
- * E-mail:
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Lambert PM, Nakata PA. Determining the Biochemical Properties of the Oxalate Biosynthetic Component (Obc)1 from Burkholderia mallei. PLoS One 2016; 11:e0163294. [PMID: 27643499 PMCID: PMC5028181 DOI: 10.1371/journal.pone.0163294] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/24/2016] [Accepted: 09/05/2016] [Indexed: 12/04/2022] Open
Abstract
Oxalic acid is produced by a variety of organisms ranging from simple microbes to complex animals. This acid has been proposed to fulfill various physiological and pathological functions which vary between organisms. In bacteria from the Burkholderia genus, oxalate secretion has been shown to be quorum sensing dependent and to support pathogenicity and cell viability. In light of the critical roles of oxalate in Burkholderia as well as other organisms, it is surprising that our understanding of how this simple dicarboxylate is biosynthesized remains incomplete. Here we report the expression, purification, and partial characterization of the first intact bacterial oxalate biosynthetic enzyme, Obc1, from B. mallei. An N-terminal His-tagged Bmobc1 was cloned into pDUET, expressed in E. coli BLR (DE3), and the recombinant enzyme purified by affinity chromatography. Oxalate biosynthetic enzyme assays coupled with HPLC analysis revealed that BmObc1 catalyzed the biosynthesis of oxalate, acetoacetate, and free CoA from oxaloacetate and a short chain acyl-CoA following Michaelis-Menten kinetics. Optimal enzyme activity was measured at pH 8.0 and a temperature around 44°C. Kinetic analysis conducted under conditions of saturating acetyl-CoA and varying oxaloacetate concentrations resulted in a calculated Km value for oxaloacetate of 94.3± 9.2 μM (mean ± SE). Under conditions of saturating oxaloacetate concentration and varying acyl-CoA (acetyl- or propionyl-CoA) concentrations kinetic analysis generated a calculated Km value of 26.8 ± 2.3 μM (mean ± SE) for acetyl-CoA and 104.4 ± 12.7 μM for propionyl-CoA. The significantly lower Km for acetyl-CoA suggests that it is strongly favored as a substrate over propionyl-CoA.
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Affiliation(s)
- Peter M. Lambert
- USDA/ARS Children’s Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, Houston, TX, 77030–2600
| | - Paul A. Nakata
- USDA/ARS Children’s Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, Houston, TX, 77030–2600
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15
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Proteometabolomic analysis of transgenic tomato overexpressing oxalate decarboxylase uncovers novel proteins potentially involved in defense mechanism against Sclerotinia. J Proteomics 2016; 143:242-253. [DOI: 10.1016/j.jprot.2016.04.047] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/31/2015] [Revised: 04/15/2016] [Accepted: 04/28/2016] [Indexed: 11/19/2022]
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16
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Functional characterization of germin and germin-like protein genes in various plant species using transgenic approaches. Biotechnol Lett 2016; 38:1405-21. [DOI: 10.1007/s10529-016-2129-9] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/31/2015] [Accepted: 05/18/2016] [Indexed: 12/24/2022]
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17
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Beracochea VC, Almasia NI, Peluffo L, Nahirñak V, Hopp EH, Paniego N, Heinz RA, Vazquez-Rovere C, Lia VV. Sunflower germin-like protein HaGLP1 promotes ROS accumulation and enhances protection against fungal pathogens in transgenic Arabidopsis thaliana. PLANT CELL REPORTS 2015; 34:1717-33. [PMID: 26070410 DOI: 10.1007/s00299-015-1819-4] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/11/2014] [Revised: 05/20/2015] [Accepted: 06/02/2015] [Indexed: 05/21/2023]
Abstract
The novel sunflower gene HaGLP1 is the first germin-like protein characterized from the family Asteraceae. It alters the host redox status and confers protection against Sclerotinia sclerotiorum and Rhizoctonia solani. Germin-like proteins (GLPs) are a large, diverse and ubiquitous family of plant glycoproteins belonging to the Cupin super family. These proteins have been widely studied because of their diverse roles in important plant processes, including defence. The novel sunflower gene HaGLP1 encodes the first germin-like protein characterized from the family Asteraceae. To analyse whether constitutive in vivo expression of the HaGLP1 gene may lead to disease tolerance, we developed transgenic Arabidopsis plants that were molecularly characterized and biologically assessed after inoculation with Sclerotinia sclerotiorum or Rhizoctonia solani. HaGLP1 expression in Arabidopsis plants conferred tolerance to S. sclerotiorum at the first stages of disease and interfered with R. solani infection, thus giving rise to significant protection against the latter. Furthermore, HaGLP1 expression in Arabidopsis plants elevated endogenous ROS levels. HaGLP1-induced tolerance does not appear to be related to a constitutive induction of the plant defence or the ROS-related genes examined here. In conclusion, our data suggest that HaGLP1 is an interesting candidate for the engineering of plants with increased fungal tolerance and that this gene could also be useful for the selection of naturally overexpressing sunflower genotypes for conventional breeding purposes.
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Affiliation(s)
- V C Beracochea
- Instituto de Biotecnología, CICVyA, Instituto Nacional de Tecnología Agropecuaria (INTA)-Castelar, Dr. Nicolás Repetto y De Los Reseros S/Nº (B1686IGC) Hurlingham, Buenos Aires, Provincia De Buenos Aires, Argentina
| | - N I Almasia
- Instituto de Biotecnología, CICVyA, Instituto Nacional de Tecnología Agropecuaria (INTA)-Castelar, Dr. Nicolás Repetto y De Los Reseros S/Nº (B1686IGC) Hurlingham, Buenos Aires, Provincia De Buenos Aires, Argentina
| | - L Peluffo
- Instituto de Biotecnología, CICVyA, Instituto Nacional de Tecnología Agropecuaria (INTA)-Castelar, Dr. Nicolás Repetto y De Los Reseros S/Nº (B1686IGC) Hurlingham, Buenos Aires, Provincia De Buenos Aires, Argentina
| | - V Nahirñak
- Instituto de Biotecnología, CICVyA, Instituto Nacional de Tecnología Agropecuaria (INTA)-Castelar, Dr. Nicolás Repetto y De Los Reseros S/Nº (B1686IGC) Hurlingham, Buenos Aires, Provincia De Buenos Aires, Argentina
| | - E H Hopp
- Instituto de Biotecnología, CICVyA, Instituto Nacional de Tecnología Agropecuaria (INTA)-Castelar, Dr. Nicolás Repetto y De Los Reseros S/Nº (B1686IGC) Hurlingham, Buenos Aires, Provincia De Buenos Aires, Argentina
- Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Ciudad Universitaria, (EHA1428), Buenos Aires, Argentina
| | - N Paniego
- Instituto de Biotecnología, CICVyA, Instituto Nacional de Tecnología Agropecuaria (INTA)-Castelar, Dr. Nicolás Repetto y De Los Reseros S/Nº (B1686IGC) Hurlingham, Buenos Aires, Provincia De Buenos Aires, Argentina
- Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Av. Rivadavia 1917 (C1033AAJ), Ciudad Autónoma De Buenos Aires, Buenos Aires, Argentina
| | - R A Heinz
- Instituto de Biotecnología, CICVyA, Instituto Nacional de Tecnología Agropecuaria (INTA)-Castelar, Dr. Nicolás Repetto y De Los Reseros S/Nº (B1686IGC) Hurlingham, Buenos Aires, Provincia De Buenos Aires, Argentina
- Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Ciudad Universitaria, (EHA1428), Buenos Aires, Argentina
- Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Av. Rivadavia 1917 (C1033AAJ), Ciudad Autónoma De Buenos Aires, Buenos Aires, Argentina
| | - C Vazquez-Rovere
- Instituto de Biotecnología, CICVyA, Instituto Nacional de Tecnología Agropecuaria (INTA)-Castelar, Dr. Nicolás Repetto y De Los Reseros S/Nº (B1686IGC) Hurlingham, Buenos Aires, Provincia De Buenos Aires, Argentina
- Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Av. Rivadavia 1917 (C1033AAJ), Ciudad Autónoma De Buenos Aires, Buenos Aires, Argentina
| | - V V Lia
- Instituto de Biotecnología, CICVyA, Instituto Nacional de Tecnología Agropecuaria (INTA)-Castelar, Dr. Nicolás Repetto y De Los Reseros S/Nº (B1686IGC) Hurlingham, Buenos Aires, Provincia De Buenos Aires, Argentina.
- Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Ciudad Universitaria, (EHA1428), Buenos Aires, Argentina.
- Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Av. Rivadavia 1917 (C1033AAJ), Ciudad Autónoma De Buenos Aires, Buenos Aires, Argentina.
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18
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Li XC, Liao YY, Leung DWM, Wang HY, Chen BL, Peng XX, Liu EE. Divergent biochemical and enzymatic properties of oxalate oxidase isoforms encoded by four similar genes in rice. PHYTOCHEMISTRY 2015; 118:216-223. [PMID: 26347131 DOI: 10.1016/j.phytochem.2015.08.019] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/12/2015] [Revised: 08/22/2015] [Accepted: 08/27/2015] [Indexed: 06/05/2023]
Abstract
The biochemical and enzymatic properties of four highly similar rice oxalate oxidase proteins (OsOxO1-4) were compared after their purification from the leaves of transgenic plants each overexpressing the respective OsOxO1-4 genes. Although alignment of their amino acid sequences has revealed divergence mainly in the signal peptides and they catalyze the same enzymic (oxalate oxidase) reaction, divergence in apparent molecular mass, Km, optimum pH, stability and responses to inhibitors and activators was uncovered by biochemical characterization of the purified OsOxO1-4 proteins. The apparent molecular mass of oligomer OsOxO1 was found to be similar to that of OsOxO3 but lower than the other two. The molecular mass of the subunit of OsOxO1 was lower than that of OsOxO3. The Km value of OsOxO3 was higher than the other three which had similar Km. OsOxO1 and OsOxO4 possessed peak activity at pH 8.5 which was close to that at the optimum pH 4.0. The activity of OsOxO2 at pH 8.5 was only 65% of that at its optimum pH 3.5, while the activity of OsOxO3 did not vary much at pH 6-9 and was also much lower than that at its optimum pH 3. OsOxO2 and OsOxO3 still maintained all their activities after being heated at 70°C for 1h while OsOxO1 and OsOxO4 lost about 30% of their activities. Pyruvate and oxaloacetic acid inhibited the activity of OsOxO3 more strongly than the other three. Interestingly, glucose 6-phosphate, fructose 6-phosphate and fructose 1,6-biphosphate related to photosynthetic assimilation of triose phosphate greatly increased the activities of OsOxO3 and OsOxO4. In addition to the differences in the biochemical properties of the four OsOxO proteins, an intriguing finding is that the purified OsOxO1-4 exhibited substrate inhibition, which is a typical of the classical Michaelis-Menten enzyme kinetics exhibited by a majority of other enzymes.
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Affiliation(s)
- Xiao Chun Li
- College of Life Sciences, South China Agricultural University, Guangzhou 510642, China
| | - Yuan Yang Liao
- College of Life Sciences, South China Agricultural University, Guangzhou 510642, China
| | - David W M Leung
- School of Biological Sciences, University of Canterbury, Private Bag 4800, Christchurch 8140, New Zealand
| | - Hai Yan Wang
- College of Life Sciences, South China Agricultural University, Guangzhou 510642, China
| | - Bai Ling Chen
- College of Life Sciences, South China Agricultural University, Guangzhou 510642, China
| | - Xin Xiang Peng
- College of Life Sciences, South China Agricultural University, Guangzhou 510642, China
| | - E E Liu
- College of Life Sciences, South China Agricultural University, Guangzhou 510642, China.
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19
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Liang X, Moomaw EW, Rollins JA. Fungal oxalate decarboxylase activity contributes to Sclerotinia sclerotiorum early infection by affecting both compound appressoria development and function. MOLECULAR PLANT PATHOLOGY 2015; 16:825-36. [PMID: 25597873 PMCID: PMC6638544 DOI: 10.1111/mpp.12239] [Citation(s) in RCA: 37] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/05/2023]
Abstract
Sclerotinia sclerotiorum pathogenesis requires the accumulation of high levels of oxalic acid (OA). To better understand the factors affecting OA accumulation, two putative oxalate decarboxylase (OxDC) genes (Ss-odc1 and Ss-odc2) were characterized. Ss-odc1 transcripts exhibited significant accumulation in vegetative hyphae, apothecia, early stages of compound appressorium development and during plant colonization. Ss-odc2 transcripts, in contrast, accumulated significantly only during mid to late stages of compound appressorium development. Neither gene was induced by low pH or exogenous OA in vegetative hyphae. A loss-of-function mutant for Ss-odc1 (Δss-odc1) showed wild-type growth, morphogenesis and virulence, and was not characterized further. Δss-odc2 mutants hyperaccumulated OA in vitro, were less efficient at compound appressorium differentiation and exhibited a virulence defect which could be fully bypassed by wounding the host plant prior to inoculation. All Δss-odc2 phenotypes were restored to the wild-type by ectopic complementation. An S. sclerotiorum strain overexpressing Ss-odc2 exhibited strong OxDC, but no oxalate oxidase activity. Increasing inoculum nutrient levels increased compound appressorium development, but not penetration efficiency, of Δss-odc2 mutants. Together, these results demonstrate differing roles for S. sclerotiorum OxDCs, with Odc2 playing a significant role in host infection related to compound appressorium formation and function.
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Affiliation(s)
- Xiaofei Liang
- Department of Plant Pathology, University of Florida, PO Box 110680, Gainesville, FL, 32611-0680, USA
| | - Ellen W Moomaw
- Department of Chemistry and Biochemistry, Kennesaw State University, 1000 Chastain Road, MD# 1203, Kennesaw, GA, 30144, USA
| | - Jeffrey A Rollins
- Department of Plant Pathology, University of Florida, PO Box 110680, Gainesville, FL, 32611-0680, USA
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20
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Chapelle E, Mendes R, Bakker PAHM, Raaijmakers JM. Fungal invasion of the rhizosphere microbiome. ISME JOURNAL 2015; 10:265-8. [PMID: 26023875 DOI: 10.1038/ismej.2015.82] [Citation(s) in RCA: 165] [Impact Index Per Article: 18.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/26/2015] [Revised: 04/10/2015] [Accepted: 04/16/2015] [Indexed: 11/09/2022]
Abstract
The rhizosphere is the infection court where soil-borne pathogens establish a parasitic relationship with the plant. To infect root tissue, pathogens have to compete with members of the rhizosphere microbiome for available nutrients and microsites. In disease-suppressive soils, pathogens are strongly restricted in growth by the activities of specific rhizosphere microorganisms. Here, we sequenced metagenomic DNA and RNA of the rhizosphere microbiome of sugar beet seedlings grown in a soil suppressive to the fungal pathogen Rhizoctonia solani. rRNA-based analyses showed that Oxalobacteraceae, Burkholderiaceae, Sphingobacteriaceae and Sphingomonadaceae were significantly more abundant in the rhizosphere upon fungal invasion. Metatranscriptomics revealed that stress-related genes (ppGpp metabolism and oxidative stress) were upregulated in these bacterial families. We postulate that the invading pathogenic fungus induces, directly or via the plant, stress responses in the rhizobacterial community that lead to shifts in microbiome composition and to activation of antagonistic traits that restrict pathogen infection.
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Affiliation(s)
- Emilie Chapelle
- Laboratory of Phytopathology, Wageningen University, Wageningen, The Netherlands
| | - Rodrigo Mendes
- Laboratory of Phytopathology, Wageningen University, Wageningen, The Netherlands.,Laboratory of Environmental Microbiology, Brazilian Agricultural Research Corporation, Embrapa Environment, Jaguariuna, Brazil
| | - Peter A H M Bakker
- Plant-Microbe Interactions, Department of Biology, Utrecht University, Utrecht, The Netherlands
| | - Jos M Raaijmakers
- Laboratory of Phytopathology, Wageningen University, Wageningen, The Netherlands.,Department of Microbial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), Wageningen, The Netherlands
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21
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Krishna G, Singh BK, Kim EK, Morya VK, Ramteke PW. Progress in genetic engineering of peanut (Arachis hypogaea L.)--a review. PLANT BIOTECHNOLOGY JOURNAL 2015; 13:147-62. [PMID: 25626474 DOI: 10.1111/pbi.12339] [Citation(s) in RCA: 43] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/10/2014] [Revised: 11/27/2014] [Accepted: 12/17/2014] [Indexed: 05/20/2023]
Abstract
Peanut (Arachis hypogaea L.) is a major species of the family, Leguminosae, and economically important not only for vegetable oil but as a source of proteins, minerals and vitamins. It is widely grown in the semi-arid tropics and plays a role in the world agricultural economy. Peanut production and productivity is constrained by several biotic (insect pests and diseases) and abiotic (drought, salinity, water logging and temperature aberrations) stresses, as a result of which crop experiences serious economic losses. Genetic engineering techniques such as Agrobacterium tumefaciens and DNA-bombardment-mediated transformation are used as powerful tools to complement conventional breeding and expedite peanut improvement by the introduction of agronomically useful traits in high-yield background. Resistance to several fungal, virus and insect pest have been achieved through variety of approaches ranging from gene coding for cell wall component, pathogenesis-related proteins, oxalate oxidase, bacterial chloroperoxidase, coat proteins, RNA interference, crystal proteins etc. To develop transgenic plants withstanding major abiotic stresses, genes coding transcription factors for drought and salinity, cytokinin biosynthesis, nucleic acid processing, ion antiporter and human antiapoptotic have been used. Moreover, peanut has also been used in vaccine production for the control of several animal diseases. In addition to above, this study also presents a comprehensive account on the influence of some important factors on peanut genetic engineering. Future research thrusts not only suggest the use of different approaches for higher expression of transgene(s) but also provide a way forward for the improvement of crops.
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Affiliation(s)
- Gaurav Krishna
- Jacob School of Biotechnology & Bioengineering, Sam Higginbottom Institute of Agriculture, Technology & Sciences (Formerly Allahabad Agricultural Institute), Deemed University, Allahabad, Uttar Pradesh, India
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Bennett R, Payton M, Chamberlin K. Response to Oxalic Acid as a Resistance Assay for Sclerotinia minor in Peanut. ACTA ACUST UNITED AC 2015. [DOI: 10.3146/0095-3679-42.1.56] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Abstract
ABSTRACT
Response to oxalic acid was evaluated as an assay for screening peanut breeding lines for resistance to Sclerotinia blight caused by Sclerotinia minor. Detached stems of six runner- and seven spanish-type peanut genotypes, varying in resistance to Sclerotinia blight, were placed in 0, 20, and 50 mM oxalic acid. Wilt severity and length of stem discoloration were rated 12, 18, and 24 hr after immersion. Wilt and stem discoloration were not observed on stems placed in water (0 mM), but differences among entries were observed for some time intervals when placed in the 20 and 50 mM oxalic acid solutions. Susceptible runner cultivars exhibited the most severe wilt symptoms, but few differences in wilting were found among the spanish genotypes. More differences in stem discoloration were observed among the spanish peanuts than the runner entries, but length of discoloration did not appear to be correlated with field resistance. Oxalic acid appears to have some potential as a resistance assay for Sclerotinia blight in runner peanuts, but may have limited use for screening spanish peanuts. Rapid and accurate methods for screening peanut breeding lines for resistance to Sclerotinia blight would accelerate progress in breeding for disease-resistant peanuts.
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Affiliation(s)
- R.S. Bennett
- USDA-Agricultural Research Service, Wheat, Peanuts and Other Field Crops Research Unit, Stillwater, OK 74075
| | - M.E. Payton
- Department of Statistics, Oklahoma State University, Stillwater, OK 74078
| | - K.D. Chamberlin
- USDA-Agricultural Research Service, Wheat, Peanuts and Other Field Crops Research Unit, Stillwater, OK 74075
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Yarullina LG, Kasimova RI, Akhatova AR. Comparison of the transcriptional activity of protective protein genes in different wheat cultivars infected with Septoria nodorum Berk. APPL BIOCHEM MICRO+ 2014. [DOI: 10.1134/s0003683814060179] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Chu Y, Guimarães LA, Wu CL, Timper P, Holbrook CC, Ozias-Akins P. A Technique to Study Meloidogyne arenaria Resistance in Agrobacterium rhizogenes-Transformed Peanut. PLANT DISEASE 2014; 98:1292-1299. [PMID: 30703931 DOI: 10.1094/pdis-12-13-1241-re] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/08/2023]
Abstract
A reliable peanut root transformation system would be useful to study the functions of genes involved in root biology and disease resistance. The objective of this study was to establish an effective protocol to produce composite plants mediated by Agrobacterium rhizogenes transformation. In total, 75% of transformed peanut seedlings produced an average of 2.83 transgenic roots per plant. Peanut seed had the highest germination rate after treatment in a chlorine gas chamber for 8 h compared with 16 h in chlorine gas or Clorox and mercuric chloride immersion treatments. High transformation efficiency was achieved when the wound site for A. rhizogenes inoculation was covered with vermiculite instead of enclosing the whole plant in a high humidity chamber. On average, 2.5 galls from Meloidogyne arenaria infection were formed per transgenic root from susceptible genotype TifGP-2. These data indicate that A. rhizogenes-transformed roots can be used to phenotype the host response to nematode challenge. Transformation of RLP-2, a candidate resistance gene for M. arenaria integrated into a silencing construct, did not alter the resistance response of Tifguard, even though downregulation of endogenous RLP-2 expression was detected in transformed roots. It is likely that RLP-2 is not the gene conditioning M. arenaria resistance in peanut.
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Affiliation(s)
- Y Chu
- Department of Horticulture, The University of Georgia Tifton Campus, Tifton 31793-5766
| | - L A Guimarães
- Department of Horticulture, The University of Georgia Tifton Campus, Tifton 31793-5766
| | - C L Wu
- Department of Horticulture, The University of Georgia Tifton Campus, Tifton 31793-5766
| | - P Timper
- United States Department of Agriculture-Agricultural Research Service, Tifton, GA 31793; and
| | - C C Holbrook
- United States Department of Agriculture-Agricultural Research Service, Tifton, GA 31793; and
| | - P Ozias-Akins
- Department of Horticulture, The University of Georgia Tifton Campus
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Hu J, Telenko DEP, Phipps PM, Grabau EA. Assessment of peanut quality and compositional characteristics among transgenic sclerotinia blight-resistant and non-transgenic susceptible cultivars. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2014; 62:7877-7885. [PMID: 24972023 DOI: 10.1021/jf5016297] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
Abstract
This study presents the results of a comparison that includes an analysis of variance and a canonical discriminant analysis to determine compositional equivalence and similarity between transgenic, sclerotinia blight-resistant and non-transgenic, susceptible cultivars of peanut in 3 years of field trials. Three Virginia-type cultivars (NC 7, Wilson, and Perry) and their corresponding transgenic lines (N70, W73, and P39) with a barley oxalate oxidase gene were analyzed for differences in key mineral nutrients, fatty acid components, hay constituents, and grade characteristics. Results from both analyses demonstrated that transgenic lines were compositionally similar to their non-transgenic parent cultivar in all factors as well as market-grade characteristics and nutritional value. Transgenic lines expressing oxalate oxidase for resistance to sclerotinia blight were substantially equivalent to their non-transgenic parent cultivar in quality and compositional characteristics.
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Affiliation(s)
- Jiahuai Hu
- Tidewater Agricultural Research and Extension Center (TAREC), Virginia Polytechnic Institute and State University , 6321 Holland Road Suffolk, Virginia 23437, United States
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Calla B, Blahut-Beatty L, Koziol L, Zhang Y, Neece DJ, Carbajulca D, Garcia A, Simmonds DH, Clough SJ. Genomic evaluation of oxalate-degrading transgenic soybean in response to Sclerotinia sclerotiorum infection. MOLECULAR PLANT PATHOLOGY 2014; 15:563-75. [PMID: 24382019 PMCID: PMC6638623 DOI: 10.1111/mpp.12115] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/05/2023]
Abstract
Oxalate oxidases (OxO) catalyse the degradation of oxalic acid (OA). Highly resistant transgenic soybean carrying an OxO gene and its susceptible parent soybean line, AC Colibri, were tested for genome-wide gene expression in response to the necrotrophic, OA-producing pathogen Sclerotinia sclerotiorum using soybean cDNA microarrays. The genes with changed expression at statistically significant levels (overall F-test P-value cut-off of 0.0001) were classified into functional categories and pathways, and were analysed to evaluate the differences in transcriptome profiles. Although many genes and pathways were found to be similarly activated or repressed in both genotypes after inoculation with S. sclerotiorum, the OxO genotype displayed a measurably faster induction of basal defence responses, as observed by the differential changes in defence-related and secondary metabolite genes compared with its susceptible parent AC Colibri. In addition, the experiment presented provides data on several other transcripts that support the hypothesis that S. sclerotiorum at least partially elicits the hypersensitive response, induces lignin synthesis (cinnamoyl CoA reductase) and elicits as yet unstudied signalling pathways (G-protein-coupled receptor and related). Of the nine genes showing the most extreme opposite directions of expression between genotypes, eight were related to photosynthesis and/or oxidation, highlighting the importance of redox in the control of this pathogen.
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Affiliation(s)
- Bernarda Calla
- University of Illinois at Urbana-Champaign, Urbana, IL, 61801, USA
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Molla KA, Karmakar S, Chanda PK, Ghosh S, Sarkar SN, Datta SK, Datta K. Rice oxalate oxidase gene driven by green tissue-specific promoter increases tolerance to sheath blight pathogen (Rhizoctonia solani) in transgenic rice. MOLECULAR PLANT PATHOLOGY 2013; 14:910-22. [PMID: 23809026 PMCID: PMC6638683 DOI: 10.1111/mpp.12055] [Citation(s) in RCA: 31] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/19/2023]
Abstract
Rice sheath blight, caused by the necrotrophic fungus Rhizoctonia solani, is one of the most devastating and intractable diseases of rice, leading to a significant reduction in rice productivity worldwide. In this article, in order to examine sheath blight resistance, we report the generation of transgenic rice lines overexpressing the rice oxalate oxidase 4 (Osoxo4) gene in a green tissue-specific manner which breaks down oxalic acid (OA), the pathogenesis factor secreted by R. solani. Transgenic plants showed higher enzyme activity of oxalate oxidase (OxO) than nontransgenic control plants, which was visualized by histochemical assays and sodium dodecylsulphate-polyacrylamide gel electrophoresis (SDS-PAGE). Transgenic rice leaves were more tolerant than control rice leaves to exogenous OA. Transgenic plants showed a higher level of expression of other defence-related genes in response to pathogen infection. More importantly, transgenic plants exhibited significantly enhanced durable resistance to R. solani. The overexpression of Osoxo4 in rice did not show any detrimental phenotypic or agronomic effect. Our findings indicate that rice OxO can be utilized effectively in plant genetic manipulation for sheath blight resistance, and possibly for resistance to other diseases caused by necrotrophic fungi, especially those that secrete OA. This is the first report of the expression of defence genes in rice in a green tissue-specific manner for sheath blight resistance.
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Affiliation(s)
- Kutubuddin A Molla
- Plant Molecular Biology and Biotechnology Laboratory, Department of Botany, University of Calcutta, 35, Ballygunge Circular Road, Kolkata, 700019, India
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Zhang B, Oakes AD, Newhouse AE, Baier KM, Maynard CA, Powell WA. A threshold level of oxalate oxidase transgene expression reduces Cryphonectria parasitica-induced necrosis in a transgenic American chestnut (Castanea dentata) leaf bioassay. Transgenic Res 2013; 22:973-82. [PMID: 23543108 PMCID: PMC3781299 DOI: 10.1007/s11248-013-9708-5] [Citation(s) in RCA: 65] [Impact Index Per Article: 5.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/02/2012] [Accepted: 03/23/2013] [Indexed: 01/08/2023]
Abstract
American chestnut (Castanea dentata) was transformed with a wheat oxalate oxidase (oxo) gene in an effort to degrade the oxalic acid (OA) secreted by the fungus Cryphonectria parasitica, thus decreasing its virulence. Expression of OxO was examined under two promoters: a strong constitutive promoter, CaMV 35S, and a predominantly vascular promoter, VspB. Oxo gene transcription was quantified by RT-qPCR. Relative expression of OxO varied approximately 200 fold among events produced with the 35S-OxO. The lowest 35S-OxO event expressed approximately 3,000 fold higher than the highest VspB-OxO event. This was potentially due to the tissue-specific nature of the VspB-controlled expression, the strength of the CaMV 35S constitutive promoter, or position effects. Leaf assays measuring necrotic lesion length were conducted to better understand the relationship between OxO expression level and the blight fungus in planta. A threshold response was observed between the OxO expression level and the C. parasitica lesion length. Five events of the 35S-OxO line showed significantly reduced lesion length compared to the blight-susceptible American chestnut. More importantly, the lesion length in these five events was reduced to the same level as the blight-resistant Chinese chestnut, C. mollissima. This is the first report on enhanced pathogen resistance in transgenic American chestnut.
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Affiliation(s)
- Bo Zhang
- Department of Environmental and Forest Biology, State University of New York-College of Environmental Science and Forestry, 1 Forestry Dr., Syracuse, NY 13210 USA
| | - Allison D. Oakes
- Department of Environmental and Forest Biology, State University of New York-College of Environmental Science and Forestry, 1 Forestry Dr., Syracuse, NY 13210 USA
| | - Andrew E. Newhouse
- Department of Environmental and Forest Biology, State University of New York-College of Environmental Science and Forestry, 1 Forestry Dr., Syracuse, NY 13210 USA
| | - Kathleen M. Baier
- Department of Environmental and Forest Biology, State University of New York-College of Environmental Science and Forestry, 1 Forestry Dr., Syracuse, NY 13210 USA
| | - Charles A. Maynard
- Department of Forest and Natural Resources Management, State University of New York-College of Environmental Science and Forestry, 1 Forestry Dr., Syracuse, NY 13210 USA
| | - William A. Powell
- Department of Environmental and Forest Biology, State University of New York-College of Environmental Science and Forestry, 1 Forestry Dr., Syracuse, NY 13210 USA
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Khajuria C, Wang H, Liu X, Wheeler S, Reese JC, El Bouhssini M, Whitworth RJ, Chen MS. Mobilization of lipids and fortification of cell wall and cuticle are important in host defense against Hessian fly. BMC Genomics 2013; 14:423. [PMID: 23800119 PMCID: PMC3701548 DOI: 10.1186/1471-2164-14-423] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/20/2013] [Accepted: 06/18/2013] [Indexed: 01/06/2023] Open
Abstract
BACKGROUND Wheat - Hessian fly interaction follows a typical gene-for-gene model. Hessian fly larvae die in wheat plants carrying an effective resistance gene, or thrive in susceptible plants that carry no effective resistance gene. RESULTS Gene sets affected by Hessian fly attack in resistant plants were found to be very different from those in susceptible plants. Differential expression of gene sets was associated with differential accumulation of intermediates in defense pathways. Our results indicated that resources were rapidly mobilized in resistant plants for defense, including extensive membrane remodeling and release of lipids, sugar catabolism, and amino acid transport and degradation. These resources were likely rapidly converted into defense molecules such as oxylipins; toxic proteins including cysteine proteases, inhibitors of digestive enzymes, and lectins; phenolics; and cell wall components. However, toxicity alone does not cause immediate lethality to Hessian fly larvae. Toxic defenses might slow down Hessian fly development and therefore give plants more time for other types of defense to become effective. CONCLUSION Our gene expression and metabolic profiling results suggested that remodeling and fortification of cell wall and cuticle by increased deposition of phenolics and enhanced cross-linking were likely to be crucial for insect mortality by depriving Hessian fly larvae of nutrients from host cells. The identification of a large number of genes that were differentially expressed at different time points during compatible and incompatible interactions also provided a foundation for further research on the molecular pathways that lead to wheat resistance and susceptibility to Hessian fly infestation.
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Affiliation(s)
- Chitvan Khajuria
- Department of Entomology, Kansas State University, Manhattan 66506, Kansas
- Current Address: Department of Entomology, University of Nebraska, Lincoln 68583, Nebraska
| | - Haiyan Wang
- Department of Statistics, Kansas State University, Manhattan 66506, Kansas
| | - Xuming Liu
- Department of Entomology, Kansas State University, Manhattan 66506, Kansas
| | - Shanda Wheeler
- Department of Entomology, Kansas State University, Manhattan 66506, Kansas
| | - John C Reese
- Department of Entomology, Kansas State University, Manhattan 66506, Kansas
| | | | - R Jeff Whitworth
- Department of Entomology, Kansas State University, Manhattan 66506, Kansas
| | - Ming-Shun Chen
- Department of Entomology, Kansas State University, Manhattan 66506, Kansas
- Hard Winter Wheat Genetics Research Unit, USDA-ARS, Kansas State University, 4008 Throckmorton, Manhattan 66506, Kansas
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Wang T, Chen X, Zhu F, Li H, Li L, Yang Q, Chi X, Yu S, Liang X. Characterization of peanut germin-like proteins, AhGLPs in plant development and defense. PLoS One 2013; 8:e61722. [PMID: 23626720 PMCID: PMC3633998 DOI: 10.1371/journal.pone.0061722] [Citation(s) in RCA: 62] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/21/2012] [Accepted: 03/13/2013] [Indexed: 01/22/2023] Open
Abstract
Background Germin-like superfamily members are ubiquitously expressed in various plant species and play important roles in plant development and defense. Although several GLPs have been identified in peanut (Arachis hypogaea L.), their roles in development and defense remain unknown. In this research, we study the spatiotemporal expression of AhGLPs in peanut and their functions in plant defense. Results We have identified three new AhGLP members (AhGLP3b, AhGLP5b and AhGLP7b) that have distinct but very closely related DNA sequences. The spatial and temporal expression profiles revealed that each peanut GLP gene has its distinct expression pattern in various tissues and developmental stages. This suggests that these genes all have their distinct roles in peanut development. Subcellular location analysis demonstrated that AhGLP2 and 5 undergo a protein transport process after synthesis. The expression of all AhGLPs increased in responding to Aspergillus flavus infection, suggesting AhGLPs' ubiquitous roles in defense to A. flavus. Each AhGLP gene had its unique response to various abiotic stresses (including salt, H2O2 stress and wound), biotic stresses (including leaf spot, mosaic and rust) and plant hormone stimulations (including SA and ABA treatments). These results indicate that AhGLPs have their distinct roles in plant defense. Moreover, in vivo study of AhGLP transgenic Arabidopsis showed that both AhGLP2 and 3 had salt tolerance, which made transgenic Arabidopsis grow well under 100 mM NaCl stress. Conclusions For the first time, our study analyzes the AhGLP gene expression profiles in peanut and reveals their roles under various stresses. These results provide an insight into the developmental and defensive roles of GLP gene family in peanut.
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Affiliation(s)
- Tong Wang
- Crops Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou, People's Republic of China
- Shandong Peanut Research Institute, Qingdao, People's Republic of China
- College of Life Science, South China Normal University, Guangzhou, People's Republic of China
| | - Xiaoping Chen
- Crops Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou, People's Republic of China
| | - Fanghe Zhu
- Crops Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou, People's Republic of China
| | - Haifen Li
- Crops Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou, People's Republic of China
| | - Ling Li
- College of Life Science, South China Normal University, Guangzhou, People's Republic of China
| | - Qingli Yang
- Shandong Peanut Research Institute, Qingdao, People's Republic of China
| | - Xiaoyuan Chi
- Shandong Peanut Research Institute, Qingdao, People's Republic of China
| | - Shanlin Yu
- Shandong Peanut Research Institute, Qingdao, People's Republic of China
| | - Xuanqiang Liang
- Crops Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou, People's Republic of China
- * E-mail:
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Rietz S, Bernsdorff FE, Cai D. Members of the germin-like protein family in Brassica napus are candidates for the initiation of an oxidative burst that impedes pathogenesis of Sclerotinia sclerotiorum. JOURNAL OF EXPERIMENTAL BOTANY 2012; 63:5507-19. [PMID: 22888126 PMCID: PMC3444267 DOI: 10.1093/jxb/ers203] [Citation(s) in RCA: 43] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/18/2023]
Abstract
Germin-like proteins (GLPs) are defined by their sequence homology to germins from barley and are present ubiquitously in plants. Analyses of corresponding genes have revealed diverse functions of GLPs in plant development and biotic and abiotic stresses. This study describes the identification of a family of 14 germin-like genes from Brassica napus (BnGLP) designated BnGLP1-BnGLP14 and investigated potential functions of BnGLPs in plant defense against the necrotrophic fungus Sclerotinia sclerotiorum. Sequence alignment and phylogenetic analyses classify the 14 BnGLPs into four groups, which were clearly distinguished from known germin oxalic acid oxidases. Transcriptional responses of the BnGLP genes to S. sclerotiorum infection was determined by comparing cultivars of susceptible B. napus 'Falcon' and partially resistant B. napus 'Zhongshuang 9'. Of the 14 BnGLP genes tested, BnGLP3 was transcriptionally upregulated in both B. napus cultivars at 6h after S. sclerotiorum infection, while upregulation of BnGLP12 was restricted to resistant B. napus 'Zhongshuang 9'. Biochemical analysis of five representative BnGLP members identified a H(2)O(2)-generating superoxide dismutase activity only for higher molecular weight complexes of BnGLP3 and BnGLP12. By analogy, H(2)O(2) formation at infected leaf sites increased after 6h, with even higher H(2)O(2) production in B. napus 'Zhongshuang 9' compared with B. napus 'Falcon'. Conversely, exogenous application of H(2)O(2) significantly reduced the susceptibility of B. napus 'Falcon'. These data suggest that early induction of BnGLP3 and BnGLP12 participates in an oxidative burst that may play a pivotal role in defence of B. napus against S. sclerotiorum.
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Affiliation(s)
- Steffen Rietz
- Department of Molecular Phytopathology, Institute of Phytopathology, Christian-Albrechts-Universität of KielGermany, Hermann, Rodewald Str. 9 D-24118 KielGermany
| | - Friederike E.M. Bernsdorff
- Department of Molecular Phytopathology, Institute of Phytopathology, Christian-Albrechts-Universität of KielGermany, Hermann, Rodewald Str. 9 D-24118 KielGermany
| | - Daguang Cai
- Department of Molecular Phytopathology, Institute of Phytopathology, Christian-Albrechts-Universität of KielGermany, Hermann, Rodewald Str. 9 D-24118 KielGermany
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Chee KY, Tan PL, Nadarajah K. Characterisation of the Barley Oxalate Oxidase Gene and Generation of Rice Transformant. ACTA ACUST UNITED AC 2012. [DOI: 10.3923/biotech.2012.263.271] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
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Partridge-Telenko DE, Hu J, Livingstone DM, Shew BB, Phipps PM, Grabau EA. Sclerotinia blight resistance in Virginia-type peanut transformed with a barley oxalate oxidase gene. PHYTOPATHOLOGY 2011; 101:786-93. [PMID: 21303213 DOI: 10.1094/phyto-10-10-0266] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/08/2023]
Abstract
Transgenic peanut lines expressing oxalate oxidase, a novel enzyme to peanut, were evaluated for resistance to Sclerotinia blight in naturally infested fields over a 5-year period. Area under the disease progress curve (AUDPC) for transgenic lines in single rows planted with seed from single-plant selections averaged 78, 83, and 90% lower than nontransgenic parents in 2004, 2005, and 2006, respectively. In addition, AUDPC in 14 transgenic lines planted with bulked seed in two-row plots averaged 81% lower compared with nontransgenic parents in 2005 and 86% lower in 16 transgenic lines in 2006. Six transgenic lines yielded 488 to 1,260 kg/ha greater than nontransgenic parents in 2005, and 10 lines yielded 537 to 2,490 kg/ha greater in 2006. Fluazinam (0.58 kg a.i./ha) fungicide sprays in 2008 and 2009 reduced AUDPC in transgenic and nontransgenic lines but AUDPC was lowest in transgenic lines. Without fluazinam, yields of transgenic lines averaged 1,133 to 1,578 kg/ha greater than nontransgenic lines in 2008 and 1,670 to 2,755 kg/ha greater in 2009. These results demonstrated that the insertion of barley oxalate oxidase in peanut conveyed a high level of resistance to Sclerotinia blight, and negated the need for costly fungicide sprays.
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da Silva LF, Dias CV, Cidade LC, Mendes JS, Pirovani CP, Alvim FC, Pereira GAG, Aragão FJL, Cascardo JCM, Costa MGC. Expression of an oxalate decarboxylase impairs the necrotic effect induced by Nep1-like protein (NLP) of Moniliophthora perniciosa in transgenic tobacco. MOLECULAR PLANT-MICROBE INTERACTIONS : MPMI 2011; 24:839-48. [PMID: 21405988 DOI: 10.1094/mpmi-12-10-0286] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/30/2023]
Abstract
Oxalic acid (OA) and Nep1-like proteins (NLP) are recognized as elicitors of programmed cell death (PCD) in plants, which is crucial for the pathogenic success of necrotrophic plant pathogens and involves reactive oxygen species (ROS). To determine the importance of oxalate as a source of ROS for OA- and NLP-induced cell death, a full-length cDNA coding for an oxalate decarboxylase (FvOXDC) from the basidiomycete Flammulina velutipes, which converts OA into CO(2) and formate, was overexpressed in tobacco plants. The transgenic plants contained less OA and more formic acid compared with the control plants and showed enhanced resistance to cell death induced by exogenous OA and MpNEP2, an NLP of the hemibiotrophic fungus Moniliophthora perniciosa. This resistance was correlated with the inhibition of ROS formation in the transgenic plants inoculated with OA, MpNEP2, or a combination of both PCD elicitors. Taken together, these results have established a pivotal function for oxalate as a source of ROS required for the PCD-inducing activity of OA and NLP. The results also indicate that FvOXDC represents a potentially novel source of resistance against OA- and NLP-producing pathogens such as M. perniciosa, the causal agent of witches' broom disease of cacao (Theobroma cacao L.).
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Affiliation(s)
- Leonardo F da Silva
- Centro de Biotecnologia e Genetica, Universidade Estadual de Santa Cruz, Brazil
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Wang T, Zhang E, Chen X, Li L, Liang X. Identification of seed proteins associated with resistance to pre-harvested aflatoxin contamination in peanut (Arachis hypogaea L). BMC PLANT BIOLOGY 2010; 10:267. [PMID: 21118527 PMCID: PMC3095339 DOI: 10.1186/1471-2229-10-267] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/31/2010] [Accepted: 11/30/2010] [Indexed: 05/22/2023]
Abstract
BACKGROUND Pre-harvest infection of peanuts by Aspergillus flavus and subsequent aflatoxin contamination is one of the food safety factors that most severely impair peanut productivity and human and animal health, especially in arid and semi-arid tropical areas. Some peanut cultivars with natural pre-harvest resistance to aflatoxin contamination have been identified through field screening. However, little is known about the resistance mechanism, which has slowed the incorporation of resistance into cultivars with commercially acceptable genetic background. Therefore, it is necessary to identify resistance-associated proteins, and then to recognize candidate resistance genes potentially underlying the resistance mechanism. RESULTS The objective of this study was to identify resistance-associated proteins in response to A. flavus infection under drought stress using two-dimensional electrophoresis with mass spectrometry. To identify proteins involved in the resistance to pre-harvest aflatoxin contamination, we compared the differential expression profiles of seed proteins between a resistant cultivar (YJ-1) and a susceptible cultivar (Yueyou 7) under well-watered condition, drought stress, and A. flavus infection with drought stress. A total of 29 spots showed differential expression between resistant and susceptible cultivars in response to A. flavus attack under drought stress. Among these spots, 12 protein spots that consistently exhibited an altered expression were screened by Image Master 5.0 software and successfully identified by MALDI-TOF MS. Five protein spots, including Oso7g0179400, PII protein, CDK1, Oxalate oxidase, SAP domain-containing protein, were uniquely expressed in the resistant cultivar. Six protein spots including low molecular weight heat shock protein precursor, RIO kinase, L-ascorbate peroxidase, iso-Ara h3, 50 S ribosomal protein L22 and putative 30 S ribosomal S9 were significantly up-regulated in the resistant cultivar challenged by A. flavus under drought stress. A significant decrease or down regulation of trypsin inhibitor caused by A. flavus in the resistant cultivar was also observed. In addition, variations in protein expression patterns for resistant and susceptible cultivars were further validated by real time RT-PCR analysis. CONCLUSION In summary, this study provides new insights into understanding of the molecular mechanism of resistance to pre-harvest aflatoxin contamination in peanut, and will help to develop peanut varieties with resistance to pre-harvested aflatoxin contamination.
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Affiliation(s)
- Tong Wang
- Gguangdong Key Lab of Biotechnology for Plant Development, College of Life Science, South China Normal University, Guangzhou 510631, China
- Crops Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou 510640, China
| | - Erhua Zhang
- Crops Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou 510640, China
| | - Xiaoping Chen
- Crops Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou 510640, China
| | - Ling Li
- Gguangdong Key Lab of Biotechnology for Plant Development, College of Life Science, South China Normal University, Guangzhou 510631, China
| | - Xuanqiang Liang
- Gguangdong Key Lab of Biotechnology for Plant Development, College of Life Science, South China Normal University, Guangzhou 510631, China
- Crops Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou 510640, China
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Lu M, Han YP, Gao JG, Wang XJ, Li WB. Identification and analysis of the germin-like gene family in soybean. BMC Genomics 2010; 11:620. [PMID: 21059215 PMCID: PMC3011853 DOI: 10.1186/1471-2164-11-620] [Citation(s) in RCA: 47] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/17/2010] [Accepted: 11/08/2010] [Indexed: 01/05/2023] Open
Abstract
BACKGROUND Germin and germin-like proteins constitute a ubiquitous family of plant proteins. A role of some family members in defense against pathogen attack had been proposed based on gene regulation studies and transgenic approaches. Soybean (G. max L. Merr.) germin genes had not been characterized at the molecular and functional levels. RESULTS In the present study, twenty-one germin gene members in soybean cultivar 'Maple Arrow' (partial resistance to Sclerotinia stem rot of soybean) were identified by in silico identification and RACE method (GmGER 1 to GmGER 21). A genome-wide analyses of these germin-like protein genes using a bioinformatics approach showed that the genes located on chromosomes 8, 1, 15, 20, 16, 19, 7, 3 and 10, on which more disease-resistant genes were located on. Sequence comparison revealed that the genes encoded three germin-like domains. The phylogenetic relationships and functional diversity of the germin gene family of soybean were analyzed among diverse genera. The expression of the GmGER genes treated with exogenous IAA suggested that GmGER genes might be regulated by auxin. Transgenic tobacco that expressed the GmGER 15 [corrected] gene exhibited high tolerance to the salt stress. In addition, the GmGER mRNA increased transiently at darkness and peaked at a time that corresponded approximately to the critical night length. The mRNA did not accumulate significantly under the constant light condition, and did not change greatly under the SD and LD treatments. CONCLUSIONS This study provides a complex overview of the GmGER genes in soybean. Phylogenetic analysis suggested that the germin and germin-like genes of the plant species that had been founded might be evolved by independent gene duplication events. The experiment indicated that germin genes exhibited diverse expression patterns during soybean development. The different time courses of the mRNAs accumulation of GmGER genes in soybean leaves appeared to have a regular photoperiodic reaction in darkness. Also the GmGER genes were proved to response to abiotic stress (such as auxin and salt), suggesting that these paralogous genes were likely involved in complex biological processes in soybean.
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MESH Headings
- Adaptation, Physiological/drug effects
- Adaptation, Physiological/genetics
- Adaptation, Physiological/radiation effects
- Amino Acid Sequence
- Base Sequence
- Chromosomes, Plant/genetics
- DNA, Complementary/genetics
- Data Mining
- Expressed Sequence Tags
- Gene Expression Regulation, Plant/drug effects
- Gene Expression Regulation, Plant/radiation effects
- Genes, Plant/genetics
- Genetic Linkage/drug effects
- Genetic Linkage/radiation effects
- Glycoproteins/genetics
- Indoleacetic Acids/pharmacology
- Light
- Molecular Sequence Data
- Multigene Family/genetics
- Phylogeny
- Plant Proteins/chemistry
- Plant Proteins/genetics
- Plant Proteins/metabolism
- Protein Structure, Tertiary
- RNA, Messenger/genetics
- RNA, Messenger/metabolism
- Sequence Alignment
- Sequence Homology, Nucleic Acid
- Sodium Chloride/pharmacology
- Glycine max/drug effects
- Glycine max/genetics
- Glycine max/radiation effects
- Species Specificity
- Stress, Physiological/drug effects
- Stress, Physiological/genetics
- Stress, Physiological/radiation effects
- Nicotiana/drug effects
- Nicotiana/genetics
- Nicotiana/radiation effects
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Affiliation(s)
- Mo Lu
- Soybean Research Institute (Key Laboratory of Soybean Biology in Chinese Ministry of Education), Northeast Agricultural University, Harbin, PR China 150030
| | - Ying-Peng Han
- Soybean Research Institute (Key Laboratory of Soybean Biology in Chinese Ministry of Education), Northeast Agricultural University, Harbin, PR China 150030
| | - Ji-Guo Gao
- Department of Life Science, Northeast Agricultural University, Harbin, PR China 150030
| | - Xiang-Jing Wang
- Department of Life Science, Northeast Agricultural University, Harbin, PR China 150030
| | - Wen-Bin Li
- Soybean Research Institute (Key Laboratory of Soybean Biology in Chinese Ministry of Education), Northeast Agricultural University, Harbin, PR China 150030
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Anderson JV, Fuerst EP, Tedrow T, Hulke B, Kennedy AC. Activation of polyphenol oxidase in dormant wild oat caryopses by a seed-decay isolate of Fusarium avenaceum. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2010; 58:10597-605. [PMID: 20853835 DOI: 10.1021/jf102625a] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/09/2023]
Abstract
Incubation of dormant wild oat (Avena fatua L., isoline M73) caryopses for 1-3 days with Fusarium avenaceum seed-decay isolate F.a.1 induced activity of the plant defense enzyme polyphenol oxidase (PPO). Both extracts and leachates obtained from F.a.1-treated caryopses had decreased abundance of an ∼57 kDa antigenic PPO and increased abundance of antigenic PPOs ranging from ∼52 to 14 kDa, as compared to extracts and leachates from untreated caryopsis. Leachates from caryopsis incubated for 2 days with F.a.1 also had 5.1- and 7.5-fold more total PPO activity/g fwt and specific activity, respectively. Fractionation of leachate proteins by ion-exchange chromatography associated the majority of PPO activity with an ∼36 kDa protein from untreated caryopses and ∼36, 25, and 24 kDa proteins from F.a.1-treated caryopses. Predicted peptide sequences obtained from high-performance liquid chromatography-tandem mass spectrometry analyses indicated that the ∼57 and 36 kDa wild oat proteins had a strong similarity to wheat PPO. However, the 25 and 24 kDa proteins were most similar to a Chitinase and oxalate oxidase, respectively. Our results indicate that F.a.1-induced activation of latent PPO in wild oat caryopsis likely involves a cleavage mechanism allowing activated PPOs to be readily mobilized into their surrounding environment.
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Affiliation(s)
- James V Anderson
- Biosciences Research Laboratory, Agricultural Research Service, US Department of Agriculture, 1605 Albrecht Boulevard, Fargo, North Dakota 58102-2765, USA.
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39
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Perchepied L, Balagué C, Riou C, Claudel-Renard C, Rivière N, Grezes-Besset B, Roby D. Nitric oxide participates in the complex interplay of defense-related signaling pathways controlling disease resistance to Sclerotinia sclerotiorum in Arabidopsis thaliana. MOLECULAR PLANT-MICROBE INTERACTIONS : MPMI 2010; 23:846-60. [PMID: 20521948 DOI: 10.1094/mpmi-23-7-0846] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/04/2023]
Abstract
Studies of the interaction between Arabidopsis thaliana and the necrotrophic fungal pathogen Sclerotinia sclerotiorum have been hampered by the extreme susceptibility of this model plant to the fungus. In addition, analyses of the plant defense response suggested the implication of a complex interplay of hormonal and signaling pathways. To get a deeper insight into this host-pathogen interaction, we first analyzed the natural variation in Arabidopsis for resistance to S. sclerotiorum. The results revealed a large variation of resistance and susceptibility in Arabidopsis, with some ecotypes, such as Ws-4, Col-0, and Rbz-1, being strongly resistant, and others, such as Shahdara, Ita-0, and Cvi-0, exhibiting an extreme susceptibility. The role of different signaling pathways in resistance was then determined by assessing the symptoms of mutants affected in the perception, production, or transduction of hormonal signals after inoculation with S. sclerotiorum. This analysis led to the conclusions that i) signaling of inducible defenses is predominantly mediated by jasmonic acid and abscisic acid, influenced by ethylene, and independent of salicylic acid; and ii) nitric oxide (NO) and reactive oxygen species are important signals required for plant resistance to S. sclerotiorum. Defense gene expression analysis supported the specific role of NO in defense activation.
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Affiliation(s)
- Laure Perchepied
- Laboratoire des Interactions Plantes-Microorganismes (LIPM), UMR CNrS-INRA 2594/441, BP 52627, Castanet-Tolosan, France
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40
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Gachomo EW, Kotchoni SO. Microscopic and biochemical evidence of differentially virulent field isolates of Diplocarpon rosae causing black spot disease of roses. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2010; 48:167-75. [PMID: 20137960 DOI: 10.1016/j.plaphy.2010.01.003] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/02/2009] [Revised: 01/08/2010] [Accepted: 01/08/2010] [Indexed: 05/07/2023]
Abstract
Black spot disease caused by Diplocarpon rosae is one of the most widespread diseases of roses that are very difficult to control due to the generative reproduction and complex genetic constitution of roses and up to now the control of black spot still requires intensive use of systemic fungicides. Here we report for the first time evidence of differentially virulent field isolates of D. rosae. Using a combination of fungal structures, disease symptoms and host cells protein expression pattern analysis we here provide direct biochemical evidence that tropical field isolates of D. rosae are more virulent and caused disease symptoms earlier than their temperate counterparts. The tropical fungal field isolates strongly induced an excessive accumulation of ROS and repressed activity of pathogenesis-related proteins such as peroxidases, chitinase and phenylalanine ammonia lyase compared to their temperate counterparts. These findings bring insights into a hidden pathogenic characteristic of tropical D. rosae field isolates compared to their temperate counterparts and open a novel dimension of parameters to be considered when controlling black spot disease of roses by fungicides in tropical versus temperate regions. Interestingly, we found that treatment of rose leaves with ROS (H2O2) prior to fungal inoculation promoted plant defense response regardless of the isolate virulence based on protein expression pattern analysis, suggesting that ROS (H2O2) can be efficiently incorporated into black spot disease management.
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Affiliation(s)
- Emma W Gachomo
- Department of Biology and Microbiology, South Dakota State University, Brookings, SD 57007, USA
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41
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Prats E, Gay AP, Roberts PC, Thomas BJ, Sanderson R, Paveley N, Lyngkjaer MF, Carver TLW, Mur LAJ. Blumeria graminis interactions with barley conditioned by different single R genes demonstrate a temporal and spatial relationship between stomatal dysfunction and cell death. PHYTOPATHOLOGY 2010; 100:21-32. [PMID: 19968546 DOI: 10.1094/phyto-100-1-0021] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/28/2023]
Abstract
Hypersensitive response (HR) against Blumeria graminis f. sp. hordei infection in barley (Hordeum vulgare) was associated with stomata "lock-up" leading to increased leaf water conductance (g(l)). Unique spatio-temporal patterns of HR formation occurred in barley with Mla1, Mla3, or MlLa R genes challenged with B. graminis f. sp. hordei. With Mla1, a rapid HR, limited to epidermal cells, arrested fungal growth before colonies initiated secondary attacks. With Mla3, mesophyll HR preceded that in epidermal cells whose initial survival supported secondary infections. With MlLa, mesophyll survived and not all attacked epidermal cells died immediately, allowing colony growth and secondary infection until arrested. Isolines with Mla1, Mla3, or MlLa genes inoculated with B. graminis f. sp. hordei ranging from 1 to 100 conidia mm(2) showed abnormally high g(l) during dark periods whose timing and extent correlated with those of each HR. Each isoline showed increased dark g(l) with the nonpathogen B. graminis f. sp. avenae which caused a single epidermal cell HR. Guard cell autofluorescence was seen only after drying of epidermal strips and closure of stomata suggesting that locked open stomata were viable. The data link stomatal lock-up to HR associated cell death and has implications for strategies for selecting disease resistant genotypes.
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Affiliation(s)
- Elena Prats
- Instituto de Agricultura Sostenible, CSIC, Alameda del Obispo, Menéndez Pidal s/n, 14080 Córdoba, Spain
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42
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Liang Y, Strelkov SE, Kav NNV. Oxalic acid-mediated stress responses in Brassica napus L. Proteomics 2009; 9:3156-73. [PMID: 19526549 DOI: 10.1002/pmic.200800966] [Citation(s) in RCA: 38] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Abstract
Oxalic acid (OA) occurs extensively in nature and plays diverse roles, especially in pathogenic processes involving various plant pathogens. However, proteome changes and modifications of signaling and oxidative network of plants in response to OA are not well understood. In order to investigate the responses of Brassica napus toward OA, a proteome analysis was conducted employing 2-DE with MS/MS. A total of 37 proteins were identified as responding to OA stress, of which 13 were up-regulated and 24 were down-regulated. These proteins were categorized into several functional groups including protein processing, RNA processing, photosynthesis, signal transduction, stress response, and redox homeostasis. Investigation of the effect of OA on phytohormone signaling and oxidative responses revealed that jasmonic acid-, ethylene-, and abscisic acid-mediated signaling pathways appear to increase at later time points, whereas those pathways mediated by salicylic acid appear to be suppressed. Moreover, the activities of the antioxidant enzymes catalase, peroxidase, superoxide dismutase and oxalic acid oxidase, but not NADPH oxidase, were suppressed by OA stress. Our findings are discussed within the context of the proposed role(s) of OA during infection by Sclerotinia sclerotiorum and subsequent disease progression.
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Affiliation(s)
- Yue Liang
- Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, Alta, Canada
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43
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Cheeseman JM. Seasonal patterns of leaf H 2O 2 content: reflections of leaf phenology, or environmental stress? FUNCTIONAL PLANT BIOLOGY : FPB 2009; 36:721-731. [PMID: 32688682 DOI: 10.1071/fp09014] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/13/2009] [Accepted: 05/17/2009] [Indexed: 05/10/2023]
Abstract
H2O2 is an ubiquitous compound involved in signalling, metabolic control, stress responses and development. The compatibility of leaf tissue levels with these functions has, however, often been questioned. The objective here is to document H2O2 levels and variability under natural conditions, and their underlying causes. Using the FOX method, bulk H2O2 concentrations were analysed in leaf samples from 18 species of herbs and trees throughout the 2006 growing season. Sampling addressing targeted predictions was emphasised in 2007 and 2008. H2O2 levels varied 100-fold through the year, with a main peak in spring. Two hypotheses were examined: (H1) that H2O2 reflects seasonally variable responses to environmental stresses, and (H2) that it reflects metabolism associated with leaf development. Based on poor or inappropriate correlations between H2O2 and indicators of light, temperature or drought stress, support for H1 was minimal. H2 was supported both by seasonal patterns and by targeted analyses of concentration changes throughout leaf development. This study concludes that bulk tissue H2O2 concentrations are poor indicators of stress, and are generally too high to reflect either signalling or metabolic control networks. Instead, the linkage of H2O2 and leaf phenology appears to reflect the roles of H2O2 in cell expansion, lignification and wall cross-linking.
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Affiliation(s)
- John M Cheeseman
- Department of Plant Biology, University of Illinois, 505 S. Goodwin Avenue, Urbana, IL 61801, USA. Email
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44
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Niu C, Akasaka-Kennedy Y, Faustinelli P, Joshi M, Rajasekaran K, Yang H, Chu Y, Cary J, Ozias-Akins P. Antifungal Activity in Transgenic Peanut (Arachis hypogaea L.) Conferred by a Nonheme Chloroperoxidase Gene. ACTA ACUST UNITED AC 2009. [DOI: 10.3146/ps08-020.1] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Abstract
Abstract
A nonheme chloroperoxidase gene (cpo-p) from Pseudomonas pyrrocinia, a growth inhibitor of mycotoxin-producing fungi, was introduced into peanut via particle bombardment. The expression of the cpo-p gene is predicted to increase pathogen defense in peanut. Embryogenic peanut tissues were bombarded with gold particles coated with plasmid pRT66 carrying the cpo-p and hygromycin phosphotransferase (hph) genes, under the control of a double CaMV 35S and a single CaMV 35S promoter, respectively. Selection for hygromycin-resistant somatic embryos was performed on a liquid medium containing 10–20 mg/L hygromycin 3–4 days after bombardment. The integration and expression of the cpo-p gene was confirmed by Southern, Northern and Western blot analyses. In vitro bioassay using crude protein extracts from transgenic T0, T1, and T4 plants showed inhibition of Aspergillus flavus hyphal growth, which could translate to a reduction in aflatoxin contamination of peanut seed.
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45
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Guo B, Chen X, Hong Y, Liang X, Dang P, Brenneman T, Holbrook C, Culbreath A. Analysis of Gene Expression Profiles in Leaf Tissues of Cultivated Peanuts and Development of EST-SSR Markers and Gene Discovery. INTERNATIONAL JOURNAL OF PLANT GENOMICS 2009; 2009:715605. [PMID: 19584933 PMCID: PMC2703745 DOI: 10.1155/2009/715605] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/12/2008] [Accepted: 04/10/2009] [Indexed: 05/20/2023]
Abstract
Peanut is vulnerable to a range of foliar diseases such as spotted wilt caused by Tomato spotted wilt virus (TSWV), early (Cercospora arachidicola) and late (Cercosporidium personatum) leaf spots, southern stem rot (Sclerotium rolfsii), and sclerotinia blight (Sclerotinia minor). In this study, we report the generation of 17,376 peanut expressed sequence tags (ESTs) from leaf tissues of a peanut cultivar (Tifrunner, resistant to TSWV and leaf spots) and a breeding line (GT-C20, susceptible to TSWV and leaf spots). After trimming vector and discarding low quality sequences, a total of 14,432 high-quality ESTs were selected for further analysis and deposition to GenBank. Sequence clustering resulted in 6,888 unique ESTs composed of 1,703 tentative consensus (TCs) sequences and 5185 singletons. A large number of ESTs (5717) representing genes of unknown functions were also identified. Among the unique sequences, there were 856 EST-SSRs identified. A total of 290 new EST-based SSR markers were developed and examined for amplification and polymorphism in cultivated peanut and wild species. Resequencing information of selected amplified alleles revealed that allelic diversity could be attributed mainly to differences in repeat type and length in the SSR regions. In addition, a few additional INDEL mutations and substitutions were observed in the regions flanking the microsatellite regions. In addition, some defense-related transcripts were also identified, such as putative oxalate oxidase (EU024476) and NBS-LRR domains. EST data in this study have provided a new source of information for gene discovery and development of SSR markers in cultivated peanut. A total of 16931 ESTs have been deposited to the NCBI GenBank database with accession numbers ES751523 to ES768453.
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Affiliation(s)
- Baozhu Guo
- Crop Protection and Management Research Unit, USDA-ARS, Tifton, GA 31793, USA
| | - Xiaoping Chen
- Department of Plant Pathology, University of Georgia, Tifton, GA 31793, USA
- Crops Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou, 51064 China
| | - Yanbin Hong
- Crops Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou, 51064 China
| | - Xuanqiang Liang
- Crops Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou, 51064 China
| | - Phat Dang
- National Peanut Research Laboratory, USDA-ARS, Dawson, GA 31742, USA
| | - Tim Brenneman
- Department of Plant Pathology, University of Georgia, Tifton, GA 31793, USA
| | - Corley Holbrook
- Crop Genetics and Breeding Research Unit, USDA-ARS, Tifton, GA 31793, USA
| | - Albert Culbreath
- Department of Plant Pathology, University of Georgia, Tifton, GA 31793, USA
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46
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Wan X, Tan J, Lu S, Lin C, Hu Y, Guo Z. Increased tolerance to oxidative stress in transgenic tobacco expressing a wheat oxalate oxidase gene via induction of antioxidant enzymes is mediated by H2O2. PHYSIOLOGIA PLANTARUM 2009; 136:30-44. [PMID: 19508366 DOI: 10.1111/j.1399-3054.2009.01210.x] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/08/2023]
Abstract
Hydrogen peroxide (H(2)O(2)) plays a key role in the regulation of plant responses to various environmental stresses and modulates the expression of related genes including those encoding antioxidant enzymes. A wheat oxalate oxidase (OxO) gene was transformed and expressed in tobacco for production of H(2)O(2). The transgenic plants exhibited enhanced OxO activities and H(2)O(2) concentrations, which was blocked by inhibitors of OxO. The transgenic plants showed increased tolerance to methyl viologen (MV) or high light-induced oxidative stress in both short-time and long-time tests by measuring their maximal photochemical efficiency of PSII (F(v)/F(m)), ion leakage and malondialdehyde. Higher activities and transcripts of antioxidant enzymes (superoxide dismutase, catalase, ascorbate peroxidase and glutathione reductase) were observed in the transgenic plants compared to their wild-type controls under normal growth conditions. Pretreatments with inhibitors of OxO and scavenger of H(2)O(2) blocked the increase of tolerance to MV-induced or high light-induced oxidative stress, as well as the induction of antioxidant enzyme activities. Pretreatments with H(2)O(2) increased tolerance to oxidative stresses and antioxidant enzyme activities. It is suggested that H(2)O(2) produced by OxO in the transgenic tobacco plants triggers the signaling pathways to upregulate expressions of antioxidant enzyme genes, which in turn results in the increase of tolerance to MV-induced and high light-induced oxidative stresses.
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Affiliation(s)
- Xiaoqing Wan
- Biotechnology Laboratory for Forages and Turfgrass, College of Life Sciences, South China Agricultural University, Guangzhou 510642, China
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47
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Wang Q, Lai T, Qin G, Tian S. Response of jujube fruits to exogenous oxalic acid treatment based on proteomic analysis. PLANT & CELL PHYSIOLOGY 2009; 50:230-42. [PMID: 19068492 DOI: 10.1093/pcp/pcn191] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/04/2023]
Abstract
In this study, we found that oxalic acid (OA) at the concentration of 5 mM could delay jujube fruit sene-scence by reducing ethylene production, repressing fruit reddening and reducing alcohol content, which consequently increased fruit resistance against blue mold caused by Penicillium expansum. In order to gain a further understanding of the mechanism by which OA delays senescence and increases disease resistance of jujube fruit, we used a proteomics approach to compare soluble proteome of jujube fruits treated with water or 5 mM OA for 10 min. A total of 25 differentially expressed proteins were identified by using electrospray ionization quadrupole time-of-flight tandem mass spectrometry (ESI-Q-TOF-MS/MS). Among these proteins, alcohol dehydrogenase 1, which plays a direct role in ethanol metabolism, was repressed, and the abundances of three photosynthesis-related proteins was enhanced in jujube fruit after OA treatment. The protein identified as a cystathionine beta-synthase domain-containing protein, which can regulate ethylene precursors, was also induced by OA treatment. The activity of 1-aminocyclopropane-1-carboxylic acid synthase was significantly suppressed in OA-treated jujube fruit. In addition, three proteins related to the defense/stress response were up-regulated by OA, and contributed to the establishment of systemic resistance induced by OA in jujube fruits. These results indicated that OA treatment might affect ethanol and ethylene metabolism, resulting in delaying senescence, and increase resistance of jujube fruits against fungal pathogens.
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Affiliation(s)
- Qing Wang
- Institute of Botany, Chinese Academy of Sciences, Beijing, PR China
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48
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Swathi Anuradha T, Divya K, Jami SK, Kirti PB. Transgenic tobacco and peanut plants expressing a mustard defensin show resistance to fungal pathogens. PLANT CELL REPORTS 2008; 27:1777-86. [PMID: 18758784 DOI: 10.1007/s00299-008-0596-8] [Citation(s) in RCA: 33] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/04/2008] [Revised: 07/28/2008] [Accepted: 08/04/2008] [Indexed: 05/10/2023]
Abstract
Defensins are small positively charged, antimicrobial peptides (approximately 5 kDa in size) and some of them exhibit potent antifungal activity. We have cloned the complete cDNA containing an ORF of 243 bp of a defensin of mustard. The deduced amino acid sequence of the peptide showed more than 90% identity to the amino acid sequence of the well-characterized defensins, RsAFP-1 and RsAFP-2 of Raphanus sativus. We have generated and characterized transgenic tobacco and peanut plants constitutively expressing the mustard defensin. Transgenic tobacco plants were resistant to the fungal pathogens, Fusarium moniliforme and Phytophthora parasitica pv. nicotianae. Transgenic peanut plants showed enhanced resistance against the pathogens, Pheaoisariopsis personata and Cercospora arachidicola, which jointly cause serious late leaf spot disease. These observations indicate that the mustard defensin gene can be deployed for deriving fungal disease resistance in transgenic crops.
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Affiliation(s)
- T Swathi Anuradha
- Department of Plant Sciences, University of Hyderabad, Hyderabad, India
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49
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Lehner A, Meimoun P, Errakhi R, Madiona K, Barakate M, Bouteau F. Toxic and signalling effects of oxalic acid: Oxalic acid-Natural born killer or natural born protector? PLANT SIGNALING & BEHAVIOR 2008; 3:746-8. [PMID: 19704845 PMCID: PMC2634576 DOI: 10.4161/psb.3.9.6634] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/18/2008] [Accepted: 07/18/2008] [Indexed: 05/05/2023]
Abstract
Oxalic acid is thought to be a key factor of the early pathogenic stage in a wide range of necrotrophic fungi. We have recently published that oxalic acid induces Programmed Cell Death (PCD) in Arabidopsis thaliana cells. This cell death results from an early anionic efflux which is a prerequisite for the synthesis of ethylene and the PCD. Complementary experiments have been carried out by using seedlings of A. thaliana. The effects of millimolar concentrations of oxalic acid were analysed on A. thaliana seedlings. A treatment with a 3 mM oxalic acid solution does not alter the development of the plants but induces the transcription of defence related genes which are anion channel dependant. Moreover, our results suggest that a pre-treatment of the seedlings with oxalic acid is able to confer the resistance of A. thaliana against Sclerotium rolfsii. Regarding our results, we suggest that oxalic acid plays two distinct roles, depending on the concentration: a high concentration of oxalic acid induces a large PCD and then contribute to the progression of the fungi. However, at low concentration it is able to induce the establishment of a resistance of the plant against the fungi.
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Affiliation(s)
- Arnaud Lehner
- LEM; EA3514; Université Paris Diderot (Paris 7); Paris, France
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50
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Shoresh M, Harman GE. The molecular basis of shoot responses of maize seedlings to Trichoderma harzianum T22 inoculation of the root: a proteomic approach. PLANT PHYSIOLOGY 2008; 147:2147-63. [PMID: 18562766 PMCID: PMC2492612 DOI: 10.1104/pp.108.123810] [Citation(s) in RCA: 133] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/31/2008] [Accepted: 06/10/2008] [Indexed: 05/04/2023]
Abstract
Trichoderma spp. are effective biocontrol agents for several soil-borne plant pathogens, and some are also known for their abilities to enhance systemic resistance to plant diseases and overall plant growth. Root colonization with Trichoderma harzianum Rifai strain 22 (T22) induces large changes in the proteome of shoots of maize (Zea mays) seedlings, even though T22 is present only on roots. We chose a proteomic approach to analyze those changes and identify pathways and genes that are involved in these processes. We used two-dimensional gel electrophoresis to identify proteins that are differentially expressed in response to colonization of maize plants with T22. Up- or down-regulated spots were subjected to tryptic digestion followed by identification using matrix-assisted laser desorption/ionization tandem time-of-flight mass spectrometry and nanospray ion-trap tandem mass spectrometry. We identified 91 out of 114 up-regulated and 30 out of 50 down-regulated proteins in the shoots. Classification of these revealed that a large portion of the up-regulated proteins are involved in carbohydrate metabolism and some were photosynthesis or stress related. Increased photosynthesis should have resulted in increased starch accumulation in seedlings and did indeed occur. In addition, numerous proteins induced in response to Trichoderma were those involved in stress and defense responses. Other processes that were up-regulated were amino acid metabolism, cell wall metabolism, and genetic information processing. Conversely, while the proteins involved in the pathways noted above were generally up-regulated, proteins involved in other processes such as secondary metabolism and protein biosynthesis were generally not affected. Up-regulation of carbohydrate metabolism and resistance responses may correspond to the enhanced growth response and induced resistance, respectively, conferred by the Trichoderma inoculation.
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Affiliation(s)
- Michal Shoresh
- Department of Horticultural Sciences, Cornell University, Geneva, New York 14456, USA.
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