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Kopecká R, Černý M. Xylem Sap Proteome Analysis Provides Insight into Root-Shoot Communication in Response to flg22. PLANTS (BASEL, SWITZERLAND) 2024; 13:1983. [PMID: 39065510 PMCID: PMC11281318 DOI: 10.3390/plants13141983] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/28/2024] [Revised: 07/17/2024] [Accepted: 07/18/2024] [Indexed: 07/28/2024]
Abstract
Xylem sap proteomics provides crucial insights into plant defense and root-to-shoot communication. This study highlights the sensitivity and reproducibility of xylem sap proteome analyses, using a single plant per sample to track over 3000 proteins in two model crop plants, Solanum tuberosum and Hordeum vulgare. By analyzing the flg22 response, we identified immune response components not detectable through root or shoot analyses. Notably, we discovered previously unknown elements of the plant immune system, including calcium/calmodulin-dependent kinases and G-type lectin receptor kinases. Despite similarities in the metabolic pathways identified in the xylem sap of both plants, the flg22 response differed significantly: S. tuberosum exhibited 78 differentially abundant proteins, whereas H. vulgare had over 450. However, an evolutionarily conserved overlap in the flg22 response proteins was evident, particularly in the CAZymes and lipid metabolism pathways, where lipid transfer proteins and lipases showed a similar response to flg22. Additionally, many proteins without conserved signal sequences for extracellular targeting were found, such as members of the HSP70 family. Interestingly, the HSP70 response to flg22 was specific to the xylem sap proteome, suggesting a unique regulatory role in the extracellular space similar to that reported in mammalians.
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Affiliation(s)
| | - Martin Černý
- Department of Molecular Biology and Radiobiology, Faculty of AgriSciences, Mendel University in Brno, 61300 Brno, Czech Republic
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2
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Jiménez-López D, Xoconostle-Cázares B, Calderón-Pérez B, Vargas-Hernández BY, Núñez-Muñoz LA, Ramírez-Pool JA, Ruiz-Medrano R. Evolutionary and Structural Analysis of PP16 in Viridiplantae. Int J Mol Sci 2024; 25:2839. [PMID: 38474088 DOI: 10.3390/ijms25052839] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/24/2024] [Revised: 02/23/2024] [Accepted: 02/25/2024] [Indexed: 03/14/2024] Open
Abstract
Members of the phloem protein 16 (PP16) gene family are induced by elicitors in rice and the corresponding proteins from cucurbits, which display RNA binding and intercellular transport activities, are accumulated in phloem sap. These proteins facilitate the movement of protein complexes through the phloem translocation flow and may be involved in the response to water deficit, among other functions. However, there is scant information regarding their function in other plants, including the identification of paralog genes in non-vascular plants and chlorophytes. In the present work, an evolutionary and structural analysis of the PP16 family in green plants (Viridiplantae) was carried out. Data mining in different databases indicated that PP16 likely originated from a larger gene present in an ancestral lineage that gave rise to chlorophytes and multicellular plants. This gene encodes a protein related to synaptotagmin, which is involved in vesicular transport in animal systems, although other members of this family play a role in lipid turnover in endomembranes and organelles. These proteins contain a membrane-binding C2 domain shared with PP16 proteins in vascular plants. In silico analysis of the predicted structure of the PP16 protein family identified several β-sheets, one α-helix, and intrinsically disordered regions. PP16 may have been originally involved in vesicular trafficking and/or membrane maintenance but specialized in long-distance signaling during the emergence of the plant vascular system.
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Affiliation(s)
- Domingo Jiménez-López
- Departamento de Biotecnología y Bioingeniería, Centro de Investigación y de Estudios Avanzados, Av. Instituto Politécnico Nacional 2508, Mexico City 07360, Mexico
| | - Beatriz Xoconostle-Cázares
- Departamento de Biotecnología y Bioingeniería, Centro de Investigación y de Estudios Avanzados, Av. Instituto Politécnico Nacional 2508, Mexico City 07360, Mexico
| | - Berenice Calderón-Pérez
- Departamento de Biotecnología y Bioingeniería, Centro de Investigación y de Estudios Avanzados, Av. Instituto Politécnico Nacional 2508, Mexico City 07360, Mexico
| | - Brenda Yazmín Vargas-Hernández
- Departamento de Biotecnología y Bioingeniería, Centro de Investigación y de Estudios Avanzados, Av. Instituto Politécnico Nacional 2508, Mexico City 07360, Mexico
| | - Leandro Alberto Núñez-Muñoz
- Departamento de Biotecnología y Bioingeniería, Centro de Investigación y de Estudios Avanzados, Av. Instituto Politécnico Nacional 2508, Mexico City 07360, Mexico
| | - José Abrahán Ramírez-Pool
- Departamento de Biotecnología y Bioingeniería, Centro de Investigación y de Estudios Avanzados, Av. Instituto Politécnico Nacional 2508, Mexico City 07360, Mexico
| | - Roberto Ruiz-Medrano
- Departamento de Biotecnología y Bioingeniería, Centro de Investigación y de Estudios Avanzados, Av. Instituto Politécnico Nacional 2508, Mexico City 07360, Mexico
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Priyadarsini S, Nandi A, Nedunchezhiyan M, Choudhari P, Singh S, Pattnaik A. Nutritional status of Zombi pea (Vigna vexillata) as influenced by plant density and deblossoming. Sci Rep 2024; 14:3189. [PMID: 38326435 PMCID: PMC10850079 DOI: 10.1038/s41598-024-52736-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/03/2023] [Accepted: 01/23/2024] [Indexed: 02/09/2024] Open
Abstract
Feeding billions, a healthy and nutritious diet in the era of climate change is a major challenge before plant breeders, geneticists and agronomist. In this context, the continuous search for adaptive and nutritious crops could be a better alternative to combat the problems of hunger and malnutrition. The zombi pea, a nutritious and underutilized leguminous vegetable, is one of such better alternatives to feed billions a nutritious food besides being a potential gene source for breeding abiotic stress resistant varieties. To evaluate its potential as a wonder crop in the tropical and subtropical regions of India, the nutritional status of tubers, pods and pericarp were investigated under different treatments of plant spacings and deblossoming. The experiment was conducted in split plot design with three replications and eight treatments during 2021-2022 in the coastal regions of India. The nutrient profiling in tubers and pericarp of pods in zombi pea revealed higher accumulation of nutrients viz. potassium (K), magnesium (Mg), iron (Fe), manganese (Mn) and zinc (Zn) with blossom retention. The zombi pea tubers reflected significantly high protein accumulation with the increase in plant spacing. The results pertaining to nutrient profiling in the pods of zombi pea indicated that the plant spacing has no significant effect on the accumulation of majority of nutrients under study. The above-mentioned findings are conspicuously novel and valuable. The present study would pave the way for understanding nutritional importance and breeding potential of this orphan crop. The blossom retention renders higher nutrient accumulation in tubers, pods and pericarp of zombi pea. Deblossoming has no significant influence on nutritional profile of this wonder crop but, wider spacing is effective in producing tubers with high protein content.
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Affiliation(s)
- Srija Priyadarsini
- Department of Vegetable Science, Institute of Agricultural Sciences, Siksha 'O' Anusandhan (Deemed to be University), Bhubaneswar, Odisha, 751029, India.
| | - Alok Nandi
- Department of Vegetable Science, Institute of Agricultural Sciences, Siksha 'O' Anusandhan (Deemed to be University), Bhubaneswar, Odisha, 751029, India
| | - Maniyam Nedunchezhiyan
- Central Tuber Crop Research Institute (CTCRI), Regional Centre, Bhubaneswar, Odisha, 751019, India
| | - Pushpajeet Choudhari
- International Crops Research Institute for the Semi-Arid Tropics, Patancheru, Hyderabad, Telangana, 502324, India
| | - Saurabh Singh
- Department of Vegetable Science, Rani Lakshmi Bai Central Agricultural University, U.P., Jhansi, 284003, India
| | - Ajoy Pattnaik
- Department of Vegetable Science, Institute of Agricultural Sciences, Siksha 'O' Anusandhan (Deemed to be University), Bhubaneswar, Odisha, 751029, India
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Naalden D, Dermauw W, Ilias A, Baggerman G, Mastop M, Silven JJM, van Kleeff PJM, Dangol S, Gaertner NF, Roseboom W, Kwaaitaal M, Kramer G, van den Burg HA, Vontas J, Van Leeuwen T, Kant MR, Schuurink RC. Interaction of Whitefly Effector G4 with Tomato Proteins Impacts Whitefly Performance. MOLECULAR PLANT-MICROBE INTERACTIONS : MPMI 2024; 37:98-111. [PMID: 38051229 DOI: 10.1094/mpmi-04-23-0045-r] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/07/2023]
Abstract
The phloem-feeding insect Bemisia tabaci is an important pest, responsible for the transmission of several crop-threatening virus species. While feeding, the insect secretes a cocktail of effectors to modulate plant defense responses. Here, we present a set of proteins identified in an artificial diet on which B. tabaci was salivating. We subsequently studied whether these candidate effectors can play a role in plant immune suppression. Effector G4 was the most robust suppressor of an induced- reactive oxygen species (ROS) response in Nicotiana benthamiana. In addition, G4 was able to suppress ROS production in Solanum lycopersicum (tomato) and Capsicum annuum (pepper). G4 localized predominantly in the endoplasmic reticulum in N. benthamiana leaves and colocalized with two identified target proteins in tomato: REF-like stress related protein 1 (RSP1) and meloidogyne-induced giant cell protein DB141 (MIPDB141). Silencing of MIPDB141 in tomato reduced whitefly fecundity up to 40%, demonstrating that the protein is involved in susceptibility to B. tabaci. Together, our data demonstrate that effector G4 impairs tomato immunity to whiteflies by interfering with ROS production and via an interaction with tomato susceptibility protein MIPDB141. [Formula: see text] Copyright © 2024 The Author(s). This is an open access article distributed under the CC BY-NC-ND 4.0 International license.
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Affiliation(s)
- Diana Naalden
- Department of Evolutionary and Population Biology, Institute for Biodiversity and Ecosystem Dynamics, University of Amsterdam, 1098 XH Amsterdam, The Netherlands
- Green Life Sciences Research Cluster, Swammerdam Institute for Life Sciences, University of Amsterdam, 1098 XH Amsterdam, The Netherlands
| | - Wannes Dermauw
- Department of Plants and Crops, Faculty of Bioscience Engineering, Ghent University, 9000 Ghent, Belgium
- Flanders Research Institute for Agriculture, Fisheries and Food, Plant Sciences Unit, 9820 Merelbeke, Belgium
| | - Aris Ilias
- Institute of Molecular Biology & Biotechnology, Foundation for Research & Technology Hellas, 70013 Heraklion, Crete, Greece
| | - Geert Baggerman
- Centre for Proteomics, University of Antwerp, 2020 Antwerp, Belgium
- Unit Environmental Risk and Health, Flemish Institute for Technological Research, 2400 Mol, Belgium
| | - Marieke Mastop
- Green Life Sciences Research Cluster, Swammerdam Institute for Life Sciences, University of Amsterdam, 1098 XH Amsterdam, The Netherlands
| | - Juliette J M Silven
- Green Life Sciences Research Cluster, Swammerdam Institute for Life Sciences, University of Amsterdam, 1098 XH Amsterdam, The Netherlands
| | - Paula J M van Kleeff
- Green Life Sciences Research Cluster, Swammerdam Institute for Life Sciences, University of Amsterdam, 1098 XH Amsterdam, The Netherlands
| | - Sarmina Dangol
- Green Life Sciences Research Cluster, Swammerdam Institute for Life Sciences, University of Amsterdam, 1098 XH Amsterdam, The Netherlands
| | - Nicolas Frédéric Gaertner
- Green Life Sciences Research Cluster, Swammerdam Institute for Life Sciences, University of Amsterdam, 1098 XH Amsterdam, The Netherlands
| | - Winfried Roseboom
- Laboratory for Mass Spectrometry of Biomolecules, University of Amsterdam, 1098 XH Amsterdam, The Netherlands
| | - Mark Kwaaitaal
- Green Life Sciences Research Cluster, Swammerdam Institute for Life Sciences, University of Amsterdam, 1098 XH Amsterdam, The Netherlands
| | - Gertjan Kramer
- Laboratory for Mass Spectrometry of Biomolecules, University of Amsterdam, 1098 XH Amsterdam, The Netherlands
| | - Harrold A van den Burg
- Green Life Sciences Research Cluster, Swammerdam Institute for Life Sciences, University of Amsterdam, 1098 XH Amsterdam, The Netherlands
| | - John Vontas
- Institute of Molecular Biology & Biotechnology, Foundation for Research & Technology Hellas, 70013 Heraklion, Crete, Greece
- Laboratory of Pesticide Science, Department of Crop Science, Agricultural University of Athens, Athens, Greece
| | - Thomas Van Leeuwen
- Department of Plants and Crops, Faculty of Bioscience Engineering, Ghent University, 9000 Ghent, Belgium
| | - Merijn R Kant
- Department of Evolutionary and Population Biology, Institute for Biodiversity and Ecosystem Dynamics, University of Amsterdam, 1098 XH Amsterdam, The Netherlands
| | - Robert C Schuurink
- Green Life Sciences Research Cluster, Swammerdam Institute for Life Sciences, University of Amsterdam, 1098 XH Amsterdam, The Netherlands
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5
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Matilla AJ. The Interplay between Enucleated Sieve Elements and Companion Cells. PLANTS (BASEL, SWITZERLAND) 2023; 12:3033. [PMID: 37687278 PMCID: PMC10489895 DOI: 10.3390/plants12173033] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/12/2023] [Revised: 08/10/2023] [Accepted: 08/15/2023] [Indexed: 09/10/2023]
Abstract
In order to adapt to sessile life and terrestrial environments, vascular plants have developed highly sophisticated cells to transport photosynthetic products and developmental signals. Of these, two distinct cell types (i.e., the sieve element (SE) and companion cell) are arranged in precise positions, thus ensuring effective transport. During SE differentiation, most of the cellular components are heavily modified or even eliminated. This peculiar differentiation implies the selective disintegration of the nucleus (i.e., enucleation) and the loss of cellular translational capacity. However, some cellular components necessary for transport (e.g., plasmalemma) are retained and specific phloem proteins (P-proteins) appear. Likewise, MYB (i.e., APL) and NAC (i.e., NAC45 and NAC86) transcription factors (TFs) and OCTOPUS proteins play a notable role in SE differentiation. The maturing SEs become heavily dependent on neighboring non-conducting companion cells, to which they are connected by plasmodesmata through which only 20-70 kDa compounds seem to be able to pass. The study of sieve tube proteins still has many gaps. However, the development of a protocol to isolate proteins that are free from any contaminating proteins has constituted an important advance. This review considers the very detailed current state of knowledge of both bound and soluble sap proteins, as well as the role played by the companion cells in their presence. Phloem proteins travel long distances by combining two modes: non-selective transport via bulk flow and selective regulated movement. One of the goals of this study is to discover how the protein content of the sieve tube is controlled. The majority of questions and approaches about the heterogeneity of phloem sap will be clarified once the morphology and physiology of the plasmodesmata have been investigated in depth. Finally, the retention of specific proteins inside an SE is an aspect that should not be forgotten.
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Affiliation(s)
- Angel J Matilla
- Departamento de Biología Funcional, Universidad de Santiago de Compostela, 14971-Santiago de Compostela, Spain
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Si Y, Fan H, Lu H, Li Y, Guo Y, Liu C, Chai L, Du C. Cucumis sativus PHLOEM PROTEIN 2-A1 like gene positively regulates salt stress tolerance in cucumber seedlings. PLANT MOLECULAR BIOLOGY 2023; 111:493-504. [PMID: 37016105 DOI: 10.1007/s11103-023-01336-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/07/2022] [Accepted: 01/27/2023] [Indexed: 06/19/2023]
Abstract
PHLOEM PROTEIN 2-A1 like (PP2-A1) gene is a member of the PP2 multigene family, and the protein encoded by which has the function of stress defense. Based on our previous proteomic study of cucumber phloem sap, CsPP2-A1 protein expression was significantly enriched under salt stress. In this paper, we obtained CsPP2-A1 interfering (CsPP2-A1-RNAi) cucumber by Agrobacterium tumefaciens-mediated method. The phenotypic changes of wild-type (WT) cucumber, CsPP2-A1-overexpressing (OE) cucumber, and CsPP2-A1-RNAi cucumber under salt treatment were observed and compared. Furthermore, physiological indicators were measured in four aspects: osmoregulation, membrane permeability, antioxidant system, and photosynthetic system. The analysis of contribution and correlation for each variable were conducted by principal component analysis (PCA) and Pearson's correlation coefficient. The above results showed that CsPP2-A1-RNAi cucumber plants exhibited weaker salt tolerance compared to WT cucumber and CsPP2-A1-OE cucumber plants in terms of phenotype and physiological indicators in response to salt stress, while CsPP2-A1-OE cucumber always showed the robust salt tolerance. Together, these results indicated that CsPP2-A1 brought a salinity tolerance ability to cucumber through osmoregulation and reactive oxygen species (ROS) homeostasis. The results of the study provided evidence for the function of CsPP2-A1 in plant salt tolerance enhancement, and they will serve as a reference for future salt-tolerant cucumber genetic manipulation.
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Affiliation(s)
- Yuyang Si
- Collaborative Innovation Center for Efficient and Green Production of Agriculture in Mountainous Areas of Zhejiang Province, College of Horticulture Science, Zhejiang A&F University, Hangzhou, Zhejiang, 311300, China
| | - Huaifu Fan
- Collaborative Innovation Center for Efficient and Green Production of Agriculture in Mountainous Areas of Zhejiang Province, College of Horticulture Science, Zhejiang A&F University, Hangzhou, Zhejiang, 311300, China
| | - Hongjie Lu
- Collaborative Innovation Center for Efficient and Green Production of Agriculture in Mountainous Areas of Zhejiang Province, College of Horticulture Science, Zhejiang A&F University, Hangzhou, Zhejiang, 311300, China
| | - Yapeng Li
- Collaborative Innovation Center for Efficient and Green Production of Agriculture in Mountainous Areas of Zhejiang Province, College of Horticulture Science, Zhejiang A&F University, Hangzhou, Zhejiang, 311300, China
| | - Yuting Guo
- Collaborative Innovation Center for Efficient and Green Production of Agriculture in Mountainous Areas of Zhejiang Province, College of Horticulture Science, Zhejiang A&F University, Hangzhou, Zhejiang, 311300, China
| | - Chen Liu
- Collaborative Innovation Center for Efficient and Green Production of Agriculture in Mountainous Areas of Zhejiang Province, College of Horticulture Science, Zhejiang A&F University, Hangzhou, Zhejiang, 311300, China
| | - Li'ang Chai
- Collaborative Innovation Center for Efficient and Green Production of Agriculture in Mountainous Areas of Zhejiang Province, College of Horticulture Science, Zhejiang A&F University, Hangzhou, Zhejiang, 311300, China
| | - Changxia Du
- Collaborative Innovation Center for Efficient and Green Production of Agriculture in Mountainous Areas of Zhejiang Province, College of Horticulture Science, Zhejiang A&F University, Hangzhou, Zhejiang, 311300, China.
- Key Laboratory of Quality and Safety Control for Subtropical Fruit and Vegetable, Ministry of Agriculture and Rural Affairs, College of Horticulture Science, Zhejiang A&F University, Hangzhou, Zhejiang, 311300, China.
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Swamy MJ, Bobbili KB, Mondal S, Narahari A, Datta D. Cucurbitaceae phloem exudate lectins: Purification, molecular characterization and carbohydrate binding characteristics. PHYTOCHEMISTRY 2022; 201:113251. [PMID: 35644485 DOI: 10.1016/j.phytochem.2022.113251] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/03/2022] [Revised: 05/14/2022] [Accepted: 05/16/2022] [Indexed: 06/15/2023]
Abstract
Much of the plant lectin research was focused on these proteins from seeds, whereas lectins from other plant tissues have been less investigated. Although presence of lectins in the phloem exudate of Cucurbitaceae species was reported over 40 years ago, only a few proteins from this family have been purified and characterized with respect to ligand binding properties, primary and secondary structures, while no 3D structure of a member of this family is known so far. Unlike lectins from other plant families and sources (e.g., seeds and tubers), which exhibit specificity towards different carbohydrate structures, all the Cucurbitaceae phloem exudate lectins characterized so far have been shown to recognize only chitooligosaccharides or glycans containing chitooligosaccharides. Interestingly, some of these proteins also bind various types of RNAs, suggesting that they may also play a role in the transport of RNA information molecules in the phloem. The present review gives an overview of the current knowledge of Cucurbitaceae phloem exudate lectins with regard to their purification, determination of primary and secondary structures, elucidation of thermodynamics and kinetics of carbohydrate binding and computational modeling to get information on their 3D structures. Finally, future perspectives of research on this important class of proteins are considered.
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Affiliation(s)
- Musti J Swamy
- School of Chemistry, University of Hyderabad, Hyderabad, 500046, India.
| | | | - Saradamoni Mondal
- School of Chemistry, University of Hyderabad, Hyderabad, 500046, India
| | | | - Debparna Datta
- School of Chemistry, University of Hyderabad, Hyderabad, 500046, India
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8
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Kehr J, Morris RJ, Kragler F. Long-Distance Transported RNAs: From Identity to Function. ANNUAL REVIEW OF PLANT BIOLOGY 2022; 73:457-474. [PMID: 34910585 DOI: 10.1146/annurev-arplant-070121-033601] [Citation(s) in RCA: 12] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
Abstract
There is now a wealth of data, from different plants and labs and spanning more than two decades, which unequivocally demonstrates that RNAs can be transported over long distances, from the cell where they are transcribed to distal cells in other tissues. Different types of RNA molecules are transported, including micro- and messenger RNAs. Whether these RNAs are selected for transport and, if so, how they are selected and transported remain, in general, open questions. This aspect is likely not independent of the biological function and relevance of the transported RNAs, which are in most cases still unclear. In this review, we summarize the experimental data supporting selectivity or nonselectivity of RNA translocation and review the evidence for biological functions. After discussing potential issues regarding the comparability between experiments, we propose criteria that need to be critically evaluated to identify important signaling RNAs.
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Affiliation(s)
- Julia Kehr
- Department of Biology, Institute for Plant Sciences and Microbiology, Universität Hamburg, Hamburg, Germany;
| | - Richard J Morris
- Computational and Systems Biology, John Innes Centre, Norwich, United Kingdom;
| | - Friedrich Kragler
- Department II, Max Planck Institute of Molecular Plant Physiology, Potsdam-Golm, Germany;
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9
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Calderón-Pérez B, Ramírez-Pool JA, Núñez-Muñoz LA, Vargas-Hernández BY, Camacho-Romero A, Lara-Villamar M, Jiménez-López D, Xoconostle-Cázares B, Ruiz-Medrano R. Engineering Macromolecular Trafficking Into the Citrus Vasculature. FRONTIERS IN PLANT SCIENCE 2022; 13:818046. [PMID: 35178061 PMCID: PMC8844563 DOI: 10.3389/fpls.2022.818046] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/18/2021] [Accepted: 01/04/2022] [Indexed: 06/14/2023]
Abstract
The plant vasculature is a central organ for long-distance transport of nutrients and signaling molecules that coordinate vegetative and reproductive processes, and adaptation response mechanisms to biotic and abiotic stress. In angiosperms, the sieve elements are devoid of nuclei, thus depending on the companion cells for the synthesis of RNA and proteins, which constitute some of the systemic signals that coordinate these processes. Massive analysis approaches have identified proteins and RNAs that could function as long-range signals in the phloem translocation stream. The selective translocation of such molecules could occur as ribonucleoprotein complexes. A key molecule facilitating this movement in Cucurbitaceae is the phloem protein CmPP16, which can facilitate the movement of RNA and other proteins into the sieve tube. The CmPP16 ortholog in Citrus CsPP16 was characterized in silico to determine its potential capacity to associate with other mobile proteins and its enrichment in the vascular tissue. The systemic nature of CsPP16 was approached by evaluating its capacity to provide phloem-mobile properties to antimicrobial peptides (AMPs), important in the innate immune defense. The engineering of macromolecular trafficking in the vasculature demonstrated the capacity to mobilize translationally fused peptides into the phloem stream for long-distance transport. The translocation into the phloem of AMPs could mitigate the growth of Candidatus Liberibacter asiaticus, with important implications for crop defense; this system also opens the possibility of translocating other molecules to modulate traits, such as plant growth, defense, and plant productivity.
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Du C, Si Y, Pang N, Li Y, Guo Y, Liu C, Fan H. Prokaryotic expression, purification, physicochemical properties and antifungal activity analysis of phloem protein PP2-A1 from cucumber. Int J Biol Macromol 2022; 194:395-401. [PMID: 34822821 DOI: 10.1016/j.ijbiomac.2021.11.081] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/12/2021] [Revised: 11/12/2021] [Accepted: 11/12/2021] [Indexed: 11/18/2022]
Abstract
Phloem protein 2 (PP2) is a protein having lectin properties that can be isolated from the phloem sap. Based on our previous proteomic study of phloem sap of Cucumis sativus, it was found that the expression of PP2 A1-like was significantly up-regulated under salt stress, which may be a molecular mechanism of plant adaptation to stress. This paper carried out the expression and purification of the CsPP2-A1 gene in E. coli for further characteristic analysis. The results demonstrated that the CsPP2-A1 in shake flask cultures was mainly expressed in the soluble form at 15 °C or in inclusion bodies at 37 °C. Secondly, Ni-IDA affinity chromatography and SDS-PAGE were employed to yield highly purified CsPP2-A1 protein. The purified CsPP2-A1 was then subjected to Western blot and MALDI-TOF-MS analysis for protein identification. The biological activity analysis results showed that CsPP2-A1 had hemagglutinating activities to rabbit erythrocytes, and Chitotetraose may be the specific inhibitory sugar of CsPP2-A1. The optimal hemagglutination activity of CsPP2-A1 protein was achieved between pH 5-9, and between 20 and 60 °C. Moreover, CsPP2-A1 had significant inhibitory effects on Botrytis cinerea and Phytophthora infestans, and the inhibitory effect on B. cinerea was better than that on P. infestans.
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Affiliation(s)
- Changxia Du
- Collaborative Innovation Center for Efficient and Green Production of Agriculture in Mountainous Areas of Zhejiang Province, College of Horticulture Science, Zhejiang A&F University, Hangzhou 311300, Zhejiang, China
| | - Yuyang Si
- Collaborative Innovation Center for Efficient and Green Production of Agriculture in Mountainous Areas of Zhejiang Province, College of Horticulture Science, Zhejiang A&F University, Hangzhou 311300, Zhejiang, China
| | - Ningning Pang
- Collaborative Innovation Center for Efficient and Green Production of Agriculture in Mountainous Areas of Zhejiang Province, College of Horticulture Science, Zhejiang A&F University, Hangzhou 311300, Zhejiang, China
| | - Yapeng Li
- Collaborative Innovation Center for Efficient and Green Production of Agriculture in Mountainous Areas of Zhejiang Province, College of Horticulture Science, Zhejiang A&F University, Hangzhou 311300, Zhejiang, China
| | - Yuting Guo
- Collaborative Innovation Center for Efficient and Green Production of Agriculture in Mountainous Areas of Zhejiang Province, College of Horticulture Science, Zhejiang A&F University, Hangzhou 311300, Zhejiang, China
| | - Chen Liu
- Collaborative Innovation Center for Efficient and Green Production of Agriculture in Mountainous Areas of Zhejiang Province, College of Horticulture Science, Zhejiang A&F University, Hangzhou 311300, Zhejiang, China
| | - Huaifu Fan
- Collaborative Innovation Center for Efficient and Green Production of Agriculture in Mountainous Areas of Zhejiang Province, College of Horticulture Science, Zhejiang A&F University, Hangzhou 311300, Zhejiang, China.
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11
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Lv X, Sun Y, Hao P, Zhang C, Tian J, Fu M, Xu Z, Wang Y, Zhang X, Xu X, Wu T, Han Z. RBP differentiation contributes to selective transmissibility of OPT3 mRNAs. PLANT PHYSIOLOGY 2021; 187:1587-1604. [PMID: 34618059 PMCID: PMC8566248 DOI: 10.1093/plphys/kiab366] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/29/2021] [Accepted: 07/11/2021] [Indexed: 06/13/2023]
Abstract
Long-distance mobile mRNAs play key roles in gene regulatory networks that control plant development and stress tolerance. However, the mechanisms underlying species-specific delivery of mRNA still need to be elucidated. Here, the use of grafts involving highly heterozygous apple (Malus) genotypes allowed us to demonstrate that apple (Malus domestica) oligopeptide transporter3 (MdOPT3) mRNA can be transported over a long distance, from the leaf to the root, to regulate iron uptake; however, the mRNA of Arabidopsis (Arabidopsis thaliana) oligopeptide transporter 3 (AtOPT3), the MdOPT3 homolog from A. thaliana, does not move from shoot to root. Reciprocal heterologous expression of the two types of mRNAs showed that the immobile AtOPT3 became mobile and moved from the shoot to the root in two woody species, Malus and Populus, while the mobile MdOPT3 became immobile in two herbaceous species, A. thaliana and tomato (Solanum lycopersicum). Furthermore, we demonstrated that the different transmissibility of OPT3 in A. thaliana and Malus might be caused by divergence in RNA-binding proteins between herbaceous and woody plants. This study provides insights into mechanisms underlying differences in mRNA mobility and validates the important physiological functions associated with this process.
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Affiliation(s)
- Xinmin Lv
- State Key Laboratory of Agrobiotechnology, College of Horticulture, China Agricultural University, Beijing, 100193, China
| | - Yaqiang Sun
- State Key Laboratory of Agrobiotechnology, College of Horticulture, China Agricultural University, Beijing, 100193, China
| | - Pengbo Hao
- State Key Laboratory of Agrobiotechnology, College of Horticulture, China Agricultural University, Beijing, 100193, China
| | - Cankui Zhang
- Department of Agronomy and Purdue Center for Plant Biology, Purdue University, West Lafayette, Indiana, 47907, USA
| | - Ji Tian
- Plant Science and Technology College, Beijing University of Agriculture, Beijing, 102206, China
| | - Mengmeng Fu
- State Key Laboratory of Agrobiotechnology, College of Horticulture, China Agricultural University, Beijing, 100193, China
| | - Zhen Xu
- State Key Laboratory of Agrobiotechnology, College of Horticulture, China Agricultural University, Beijing, 100193, China
| | - Yi Wang
- State Key Laboratory of Agrobiotechnology, College of Horticulture, China Agricultural University, Beijing, 100193, China
| | - Xinzhong Zhang
- State Key Laboratory of Agrobiotechnology, College of Horticulture, China Agricultural University, Beijing, 100193, China
| | - Xuefeng Xu
- State Key Laboratory of Agrobiotechnology, College of Horticulture, China Agricultural University, Beijing, 100193, China
| | - Ting Wu
- State Key Laboratory of Agrobiotechnology, College of Horticulture, China Agricultural University, Beijing, 100193, China
| | - Zhenhai Han
- State Key Laboratory of Agrobiotechnology, College of Horticulture, China Agricultural University, Beijing, 100193, China
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12
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van Bel AJE. The plant axis as the command centre for (re)distribution of sucrose and amino acids. JOURNAL OF PLANT PHYSIOLOGY 2021; 265:153488. [PMID: 34416599 DOI: 10.1016/j.jplph.2021.153488] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/09/2021] [Revised: 07/13/2021] [Accepted: 08/01/2021] [Indexed: 06/13/2023]
Abstract
Along with the increase in size required for optimal colonization of terrestrial niches, channels for bidirectional bulk transport of materials in land plants evolved during a period of about 100 million years. These transport systems are essentially still in operation - though perfected over the following 400 million years - and make use of hydrostatic differentials. Substances are accumulated or released at the loading and unloading ends, respectively, of the transport channels. The intermediate stretch between the channel termini is bifunctional and executes orchestrated release and retrieval of solutes. Analyses of anatomical and physiological data demonstrate that the release/retrieval zone extends deeper into sources and sinks than is commonly thought and covers usually much more than 99% of the translocation stretch. This review sketches the significance of events in the intermediate stretch for distribution of organic materials over the plant body. Net leakage from the channels does not only serve maintenance and growth of tissues along the pathway, but also diurnal, short-term or seasonal storage of reserve materials, and balanced distribution of organic C- and N-compounds over axial and terminal sinks. Release and retrieval are controlled by plasma-membrane transporters at the vessel/parenchyma interface in the contact pits along xylem vessels and by plasma-membrane transporters at the interface between companion cells and phloem parenchyma along sieve tubes. The xylem-to-phloem pathway vice versa is a bifacial, radially oriented system comprising a symplasmic pathway, of which entrance and exit are controlled at specific membrane checkpoints, and a parallel apoplasmic pathway. A broad range of specific sucrose and amino-acid transporters are deployed at the checkpoint plasma membranes. SUCs, SUTs, STPs, SWEETs, and AAPs, LTHs, CATs are localized to the plasma membranes in question, both in monocots and eudicots. Presence of Umamits in monocots is uncertain. There is some evidence for endo- and exocytosis at the vessel/parenchyma interface supplementary to the transporter-mediated uptake and release. Actions of transporters at the checkpoints are equally decisive for storage and distribution of amino acids and sucrose in monocots and eudicots, but storage and distribution patterns may differ between both taxa. While the majority of reserves is sequestered in vascular parenchyma cells in dicots, lack of space in monocot vasculature urges "outsourcing" of storage in ground parenchyma around the translocation path. In perennial dicots, specialized radial pathways (rays) include the sites for seasonal alternation of storage and mobilization. In dicots, apoplasmic phloem loading and a correlated low rate of release along the path would favour supply with photoassimilates of terminal sinks, while symplasmic phloem loading and a correlated higher rate of release along the path favours supply of axial sinks and transfer to the xylem. The balance between the resource acquisition by terminal and axial sinks is an important determinant of relative growth rate and, hence, for the fitness of plants in various habitats. Body enlargement as the evolutionary drive for emergence of vascular systems and mass transport propelled by hydrostatic differentials.
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Affiliation(s)
- Aart J E van Bel
- Institute of Phythopathology, Centre for BioSystems, Land Use and Nutrition, Justus-Liebig University, Heinrich-Buff-Ring 26-32, D-35392, Giessen, Germany.
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13
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Differential Tropism in Roots and Shoots of Resistant and Susceptible Cassava ( Manihot esculenta Crantz) Infected by Cassava Brown Streak Viruses. Cells 2021; 10:cells10051221. [PMID: 34067728 PMCID: PMC8156387 DOI: 10.3390/cells10051221] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/27/2021] [Revised: 05/12/2021] [Accepted: 05/13/2021] [Indexed: 11/24/2022] Open
Abstract
Cassava brown streak disease (CBSD) is a destructive disease of cassava in Eastern and Central Africa. Because there was no source of resistance in African varieties to provide complete protection against the viruses causing the disease, we searched in South American germplasm and identified cassava lines that did not become infected with the cassava brown streak viruses. These findings motivated further investigations into the mechanism of virus resistance. We used RNAscope® in situ hybridization to localize cassava brown streak virus in cassava germplasm lines that were highly resistant (DSC 167, immune) or that restricted virus infections to stems and roots only (DSC 260). We show that the resistance in those lines is not a restriction of long-distance movement but due to preventing virus unloading from the phloem into parenchyma cells for replication, thus restricting the virus to the phloem cells only. When DSC 167 and DSC 260 were compared for virus invasion, only a low CBSV signal was found in phloem tissue of DSC 167, indicating that there is no replication in this host, while the presence of intense hybridization signals in the phloem of DSC 260 provided evidence for virus replication in companion cells. In neither of the two lines studied was there evidence of virus replication outside the phloem tissues. Thus, we conclude that in resistant cassava lines, CBSV is confined to the phloem tissues only, in which virus replication can still take place or is arrested.
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14
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The interplay of phloem-mobile signals in plant development and stress response. Biosci Rep 2021; 40:226464. [PMID: 32955092 PMCID: PMC7538631 DOI: 10.1042/bsr20193329] [Citation(s) in RCA: 19] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2020] [Revised: 09/16/2020] [Accepted: 09/18/2020] [Indexed: 01/28/2023] Open
Abstract
Plants integrate a variety of biotic and abiotic factors for optimal growth in their given environment. While some of these responses are local, others occur distally. Hence, communication of signals perceived in one organ to a second, distal part of the plant and the coordinated developmental response require an intricate signaling system. To do so, plants developed a bipartite vascular system that mediates the uptake of water, minerals, and nutrients from the soil; transports high-energy compounds and building blocks; and traffics essential developmental and stress signals. One component of the plant vasculature is the phloem. The development of highly sensitive mass spectrometry and molecular methods in the last decades has enabled us to explore the full complexity of the phloem content. As a result, our view of the phloem has evolved from a simple transport path of photoassimilates to a major highway for pathogens, hormones and developmental signals. Understanding phloem transport is essential to comprehend the coordination of environmental inputs with plant development and, thus, ensure food security. This review discusses recent developments in its role in long-distance signaling and highlights the role of some of the signaling molecules. What emerges is an image of signaling paths that do not just involve single molecules but rather, quite frequently an interplay of several distinct molecular classes, many of which appear to be transported and acting in concert.
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15
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Liu Y, Lin T, Valencia MV, Zhang C, Lv Z. Unraveling the Roles of Vascular Proteins Using Proteomics. Molecules 2021; 26:molecules26030667. [PMID: 33514014 PMCID: PMC7865979 DOI: 10.3390/molecules26030667] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2020] [Revised: 01/04/2021] [Accepted: 01/25/2021] [Indexed: 12/03/2022] Open
Abstract
Vascular bundles play important roles in transporting nutrients, growth signals, amino acids, and proteins between aerial and underground tissues. In order to understand these sophisticated processes, a comprehensive analysis of the roles of the components located in the vascular tissues is required. A great deal of data has been obtained from proteomic analyses of vascular tissues in plants, which mainly aim to identify the proteins moving through the vascular tissues. Here, different aspects of the phloem and xylem proteins are reviewed, including their collection methods, and their main biological roles in growth, and biotic and abiotic stress responses. The study of vascular proteomics shows great potential to contribute to our understanding of the biological mechanisms related to development and defense in plants.
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Affiliation(s)
- Yan Liu
- Institute of Sericulture and Tea, Zhejiang Academy of Agricultural Sciences, Hangzhou 310021, China; (Y.L.); (T.L.)
| | - Tianbao Lin
- Institute of Sericulture and Tea, Zhejiang Academy of Agricultural Sciences, Hangzhou 310021, China; (Y.L.); (T.L.)
| | - Maria Valderrama Valencia
- Departamento Académico de Biología–Universidad Nacional de San Agustin de Arequipa Nro117, Arequipa 04000, Peru;
| | - Cankui Zhang
- Department of Agronomy and Purdue Center for Plant Biology, Purdue University, West Lafayette, IN 47907, USA
- Correspondence: (C.Z.); (Z.L.)
| | - Zhiqiang Lv
- Institute of Sericulture and Tea, Zhejiang Academy of Agricultural Sciences, Hangzhou 310021, China; (Y.L.); (T.L.)
- Correspondence: (C.Z.); (Z.L.)
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16
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Castañeda V, González EM, Wienkoop S. Phloem Sap Proteins Are Part of a Core Stress Responsive Proteome Involved in Drought Stress Adjustment. FRONTIERS IN PLANT SCIENCE 2021; 12:625224. [PMID: 33603764 PMCID: PMC7884324 DOI: 10.3389/fpls.2021.625224] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/02/2020] [Accepted: 01/08/2021] [Indexed: 05/08/2023]
Abstract
During moderate drought stress, plants can adjust by changes in the protein profiles of the different organs. Plants transport and modulate extracellular stimuli local and systemically through commonly induced inter- and intracellular reactions. However, most proteins are frequently considered, cell and organelle specific. Hence, while signaling molecules and peptides can travel systemically throughout the whole plant, it is not clear, whether protein isoforms may exist ubiquitously across organs, and what function those may have during drought regulation. By applying shotgun proteomics, we extracted a core proteome of 92 identical protein isoforms, shared ubiquitously amongst several Medicago truncatula tissues, including roots, phloem sap, petioles, and leaves. We investigated their relative distribution across the different tissues and their response to moderate drought stress. In addition, we functionally compared this plant core stress responsive proteome with the organ-specific proteomes. Our study revealed plant ubiquitous protein isoforms, mainly related to redox homeostasis and signaling and involved in protein interaction networks across the whole plant. Furthermore, about 90% of these identified core protein isoforms were significantly involved in drought stress response, indicating a crucial role of the core stress responsive proteome (CSRP) in the plant organ cross-communication, important for a long-distance stress-responsive network. Besides, the data allowed for a comprehensive characterization of the phloem proteome, revealing new insights into its function. For instance, CSRP protein levels involved in stress and redox are relatively more abundant in the phloem compared to the other tissues already under control conditions. This suggests a major role of the phloem in stress protection and antioxidant activity enabling the plants metabolic maintenance and rapid response upon moderate stress. We anticipate our study to be a starting point for future investigations of the role of the core plant proteome. Under an evolutionary perspective, CSRP would enable communication of different cells with each other and the environment being crucial for coordinated stress response of multicellular organisms.
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Affiliation(s)
- Veronica Castañeda
- Department of Sciences, Institute for Multidisciplinary Research in Applied Biology, Universidad Pública de Navarra, Pamplona, Spain
| | - Esther M. González
- Department of Sciences, Institute for Multidisciplinary Research in Applied Biology, Universidad Pública de Navarra, Pamplona, Spain
- Esther M. González,
| | - Stefanie Wienkoop
- Unit of Molecular Systems Biology, Department of Functional and Evolution Ecology, University of Vienna, Vienna, Austria
- *Correspondence: Stefanie Wienkoop,
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17
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Zhang C, Qi M, Zhang X, Wang Q, Yu Y, Zhang Y, Kong Z. Rhizobial infection triggers systemic transport of endogenous RNAs between shoots and roots in soybean. SCIENCE CHINA. LIFE SCIENCES 2020; 63:1213-1226. [PMID: 32221813 DOI: 10.1007/s11427-019-1608-7] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/15/2019] [Accepted: 12/16/2019] [Indexed: 10/24/2022]
Abstract
Legumes have evolved a symbiotic relationship with rhizobial bacteria and their roots form unique nitrogen-fixing organs called nodules. Studies have shown that abiotic and biotic stresses alter the profile of gene expression and transcript mobility in plants. However, little is known about the systemic transport of RNA between roots and shoots in response to rhizobial infection on a genome-wide scale during the formation of legume-rhizobia symbiosis. In our study, we found that two soybean (Glycine max) cultivars, Peking and Williams, show a high frequency of single nucleotide polymorphisms; this allowed us to characterize the origin and mobility of transcripts in hetero-grafts of these two cultivars. We identified 4,552 genes that produce mobile RNAs in soybean, and found that rhizobial infection triggers mass transport of mRNAs between shoots and roots at the early stage of nodulation. The majority of these mRNAs are of relatively low abundance and their transport occurs in a selective manner in soybean plants. Notably, the mRNAs that moved from shoots to roots at the early stage of nodulation were enriched in many nodule-related responsive processes. Moreover, the transcripts of many known symbiosis-related genes that are induced by rhizobial infection can move between shoots and roots. Our findings provide a deeper understanding of endogenous RNA transport in legume-rhizobia symbiotic processes.
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Affiliation(s)
- Chen Zhang
- State Key Laboratory of Plant Genomics, Institute of Microbiology, Innovative Academy of Seed Design, Chinese Academy of Sciences, Beijing, 100101, China
- University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Meifang Qi
- Shanghai Institute of Plant Physiology and Ecology, Chinese Academy of Sciences, Shanghai, 200032, China
- University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Xiaxia Zhang
- State Key Laboratory of Plant Genomics, Institute of Microbiology, Innovative Academy of Seed Design, Chinese Academy of Sciences, Beijing, 100101, China
| | - Qi Wang
- State Key Laboratory of Plant Genomics, Institute of Microbiology, Innovative Academy of Seed Design, Chinese Academy of Sciences, Beijing, 100101, China
| | - Yanjun Yu
- State Key Laboratory of Plant Genomics, Institute of Microbiology, Innovative Academy of Seed Design, Chinese Academy of Sciences, Beijing, 100101, China
| | - Yijing Zhang
- Shanghai Institute of Plant Physiology and Ecology, Chinese Academy of Sciences, Shanghai, 200032, China.
| | - Zhaosheng Kong
- State Key Laboratory of Plant Genomics, Institute of Microbiology, Innovative Academy of Seed Design, Chinese Academy of Sciences, Beijing, 100101, China.
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18
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Rauf I, Asif M, Amin I, Naqvi RZ, Umer N, Mansoor S, Jander G. Silencing cathepsin L expression reduces Myzus persicae protein content and the nutritional value as prey for Coccinella septempunctata. INSECT MOLECULAR BIOLOGY 2019; 28:785-797. [PMID: 30980445 DOI: 10.1111/imb.12589] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
Gut-expressed aphid genes, which may be more easily inhibited by RNA interference (RNAi) constructs, are attractive targets for pest control efforts involving transgenic plants. Here we show that expression of cathepsin L, which encodes a cysteine protease that functions in aphid guts, can be reduced by expression of an RNAi construct in transgenic tobacco. The effectiveness of this approach is demonstrated by up to 80% adult mortality, reduced fecundity, and delayed nymph production of Myzus persicae (green peach aphids) when cathepsin L expression was reduced by plant-mediated RNAi. Consistent with the function of cathepsin L as a gut protease, M. persicae fed on the RNAi plants had a lower protein content in their bodies and excreted more protein and/or free amino acids in their honeydew. Larvae of Coccinella septempunctata (seven-spotted ladybugs) grew more slowly on aphids having reduced cathepsin L expression, suggesting that prey insect nutritive value, and not just direct negative effects of the RNAi construct, needs to be considered when producing transgenic plants for RNAi-mediated pest control.
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Affiliation(s)
- I Rauf
- Agricultural Biotechnology Division, National Institute for Biotechnology and Genetic Engineering (NIBGE), Faisalabad, Punjab, Pakistan
- Pakistan Institute of Engineering & Applied Sciences (PIEAS), Nilore, Islamabad, Pakistan
- Boyce Thompson Institute, Ithaca, NY, USA
| | - M Asif
- Agricultural Biotechnology Division, National Institute for Biotechnology and Genetic Engineering (NIBGE), Faisalabad, Punjab, Pakistan
| | - I Amin
- Agricultural Biotechnology Division, National Institute for Biotechnology and Genetic Engineering (NIBGE), Faisalabad, Punjab, Pakistan
| | - R Z Naqvi
- Agricultural Biotechnology Division, National Institute for Biotechnology and Genetic Engineering (NIBGE), Faisalabad, Punjab, Pakistan
| | - N Umer
- Agricultural Biotechnology Division, National Institute for Biotechnology and Genetic Engineering (NIBGE), Faisalabad, Punjab, Pakistan
- Pakistan Institute of Engineering & Applied Sciences (PIEAS), Nilore, Islamabad, Pakistan
- Boyce Thompson Institute, Ithaca, NY, USA
| | - S Mansoor
- Agricultural Biotechnology Division, National Institute for Biotechnology and Genetic Engineering (NIBGE), Faisalabad, Punjab, Pakistan
| | - G Jander
- Boyce Thompson Institute, Ithaca, NY, USA
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19
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Branco R, Masle J. Systemic signalling through translationally controlled tumour protein controls lateral root formation in Arabidopsis. JOURNAL OF EXPERIMENTAL BOTANY 2019; 70:3927-3940. [PMID: 31037291 PMCID: PMC6685649 DOI: 10.1093/jxb/erz204] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/22/2019] [Accepted: 04/06/2019] [Indexed: 05/05/2023]
Abstract
The plant body plan and primary organs are established during embryogenesis. However, in contrast to animals, plants have the ability to generate new organs throughout their whole life. These give them an extraordinary developmental plasticity to modulate their size and architecture according to environmental constraints and opportunities. How this plasticity is regulated at the whole-organism level is elusive. Here we provide evidence for a role for translationally controlled tumour protein (TCTP) in regulating the iterative formation of lateral roots in Arabidopsis. AtTCTP1 modulates root system architecture through a dual function: as a general constitutive growth promoter enhancing root elongation and as a systemic signalling agent via mobility in the vasculature. AtTCTP1 encodes mRNAs with long-distance mobility between the shoot and roots. Mobile shoot-derived TCTP1 gene products act specifically to enhance the frequency of lateral root initiation and emergence sites along the primary root pericycle, while root elongation is controlled by local constitutive TCTP1 expression and scion size. These findings uncover a novel type for an integrative signal in the control of lateral root initiation and the compromise for roots between branching more profusely or elongating further. They also provide the first evidence in plants of an extracellular function of the vital, highly expressed ubiquitous TCTP1.
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Affiliation(s)
- Rémi Branco
- The Australian National University, College of Science, Research School of Biology, Canberra ACT, Australia
| | - Josette Masle
- The Australian National University, College of Science, Research School of Biology, Canberra ACT, Australia
- Correspondence:
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20
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Localized expression of antimicrobial proteins mitigates huanglongbing symptoms in Mexican lime. J Biotechnol 2018; 285:74-83. [DOI: 10.1016/j.jbiotec.2018.08.012] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/08/2018] [Revised: 07/16/2018] [Accepted: 08/24/2018] [Indexed: 11/19/2022]
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21
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Reagan BC, Ganusova EE, Fernandez JC, McCray TN, Burch-Smith TM. RNA on the move: The plasmodesmata perspective. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2018; 275:1-10. [PMID: 30107876 DOI: 10.1016/j.plantsci.2018.07.001] [Citation(s) in RCA: 29] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/05/2018] [Revised: 05/25/2018] [Accepted: 07/04/2018] [Indexed: 05/11/2023]
Abstract
It is now widely accepted that plant RNAs can have effects at sites far away from their sites of synthesis. Cellular mRNA transcripts, endogenous small RNAs and defense-related small RNAs all move from cell to cell via plasmodesmata (PD), and may even move long distances in the phloem. Despite their small size, PD have complicated substructures, and the area of the pore available for RNA trafficking can be remarkably small. The intent of this review is to bring into focus the role of PD in cell-to-cell and long distance communication in plants. We consider how cellular RNAs could move through the cell to the PD and thence through PD. The protein composition of PD and the possible roles of PD proteins in RNA trafficking are also discussed. Recent evidence for RNA metabolism in organelles acting as a factor in controlling PD flux is also presented, highlighting new aspects of plant intra- and intercellular communication. It is clear that while the phenomenon of RNA mobility is common and essential, many questions remain, and these have been highlighted throughout this review.
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Affiliation(s)
- Brandon C Reagan
- Department of Biochemistry & Cellular and Molecular Biology, University of Tennessee, Knoxville, TN 37996, United States
| | - Elena E Ganusova
- Department of Biochemistry & Cellular and Molecular Biology, University of Tennessee, Knoxville, TN 37996, United States
| | - Jessica C Fernandez
- Department of Biochemistry & Cellular and Molecular Biology, University of Tennessee, Knoxville, TN 37996, United States
| | - Tyra N McCray
- School of Genome Science and Technology, University of Tennessee, Knoxville, TN 37996, United States
| | - Tessa M Burch-Smith
- Department of Biochemistry & Cellular and Molecular Biology, University of Tennessee, Knoxville, TN 37996, United States; School of Genome Science and Technology, University of Tennessee, Knoxville, TN 37996, United States.
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22
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Endo M, Yoshida M, Sasaki Y, Negishi K, Horikawa K, Daimon Y, Kurotani KI, Notaguchi M, Abe M, Araki T. Re-Evaluation of Florigen Transport Kinetics with Separation of Functions by Mutations That Uncouple Flowering Initiation and Long-Distance Transport. PLANT & CELL PHYSIOLOGY 2018; 59:1621-1629. [PMID: 29562349 DOI: 10.1093/pcp/pcy063] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/22/2018] [Accepted: 03/15/2018] [Indexed: 06/08/2023]
Abstract
In many plants, timing of flowering is regulated by day length. In Arabidopsis, florigen, FLOWERING LOCUS T (FT) protein, is synthesized in leaf phloem companion cells in response to long days and is transported to the shoot apical meristem (SAM) through the phloem. The temporal aspects of florigen transportation have been studied in various plants by physiological experiments. Nevertheless, little is known about how FT protein transportation is regulated in Arabidopsis. In this study, we performed heat shock-based transient FT induction in a single leaf blade and detected the FT protein in the shoot apex by 2D-PAGE. We demonstrated that detectable amounts of FT were transported from the leaf to the shoot apex within 8 h, and subsequent FT-induced target gene expression was detected within 8-12 h. Furthermore, we identified three amino acid residues (V70, S76 and R83) where missense mutations led to reduced mobility. Interestingly, these FT variants lost only their transportation ability, but retained their flowering promotion capacity, suggesting that discrete amino acids are involved in flowering regulation and transport regulation. Since the interaction with FT-INTERACTING PROTEIN 1 (FTIP1) was not affected in these FT variants, we hypothesize that the three amino acid residues are not involved in the FTIP1-mediated pathway of uploading, but rather in the subsequent step(s) of FT transport.
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Affiliation(s)
- Motomu Endo
- Graduate School of Biostudies, Kyoto University, Kyoto, Japan
- Japan Science and Technology Agency, PRESTO, 4-1-8 Honcho Kawaguchi, Saitama, Japan
| | | | - Youhei Sasaki
- Graduate School of Biostudies, Kyoto University, Kyoto, Japan
| | - Katsuya Negishi
- Graduate School of Biostudies, Kyoto University, Kyoto, Japan
| | - Kobo Horikawa
- Graduate School of Biostudies, Kyoto University, Kyoto, Japan
| | - Yasufumi Daimon
- Graduate School of Biostudies, Kyoto University, Kyoto, Japan
| | | | | | - Mitsutomo Abe
- Department of Biological Sciences, Graduate School of Science, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo, Japan
| | - Takashi Araki
- Graduate School of Biostudies, Kyoto University, Kyoto, Japan
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23
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Bobbili KB, Datta D, Mondal S, Polepalli S, Pohlentz G, Mormann M, Swamy MJ. Purification, chitooligosaccharide binding properties and thermal stability of CIA24, a new PP2-like phloem exudate lectin from ivy gourd (Coccinia indica). Int J Biol Macromol 2018; 110:588-597. [DOI: 10.1016/j.ijbiomac.2018.01.001] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2017] [Revised: 12/12/2017] [Accepted: 01/01/2018] [Indexed: 10/18/2022]
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24
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Sashi P, Singarapu KK, Bhuyan AK. Solution NMR Structure and Backbone Dynamics of Partially Disordered Arabidopsis thaliana Phloem Protein 16-1, a Putative mRNA Transporter. Biochemistry 2018; 57:912-924. [DOI: 10.1021/acs.biochem.7b01071] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
Affiliation(s)
- Pulikallu Sashi
- School
of Chemistry, University of Hyderabad, Hyderabad 500046, India
| | - Kiran K. Singarapu
- Innovation
Plaza, Integrated Product Development Organization, Dr. Reddy’s Laboratory, Hyderabad 500090, India
| | - Abani K. Bhuyan
- School
of Chemistry, University of Hyderabad, Hyderabad 500046, India
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Bruckner FP, Xavier ADS, Cascardo RDS, Otoni WC, Zerbini FM, Alfenas‐Zerbini P. Translationally controlled tumour protein (TCTP) from tomato and Nicotiana benthamiana is necessary for successful infection by a potyvirus. MOLECULAR PLANT PATHOLOGY 2017; 18:672-683. [PMID: 27159273 PMCID: PMC6638207 DOI: 10.1111/mpp.12426] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/08/2016] [Revised: 05/02/2016] [Accepted: 05/05/2016] [Indexed: 05/20/2023]
Abstract
Translationally controlled tumour protein (TCTP) is a ubiquitously distributed protein in eukaryotes, involved in the regulation of several processes, including cell cycle progression, cell growth, stress protection, apoptosis and maintenance of genomic integrity. Its expression is induced during the early stages of tomato (Solanum lycopersicum) infection by the potyvirus Pepper yellow mosaic virus (PepYMV, a close relative of Potato virus Y). Tomato TCTP is a protein of 168 amino acids, which contains all the conserved domains of the TCTP family. To study the effects of TCTP silencing in PepYMV infection, Nicotiana benthamiana plants were silenced by virus-induced gene silencing (VIGS) and transgenic tomato plants silenced for TCTP were obtained. In the early stages of infection, both tomato and N. benthamiana silenced plants accumulated less virus than control plants. Transgenic tomato plants showed a drastic reduction in symptoms and no viral accumulation at 14 days post-inoculation. Subcellular localization of TCTP was determined in healthy and systemically infected N. benthamiana leaves. TCTP was observed in both the nuclei and cytoplasm of non-infected cells, but only in the cytoplasm of infected cells. Our results indicate that TCTP is a growth regulator necessary for successful PepYMV infection and that its localization is altered by the virus, probably to favour the establishment of virus infection. A network with putative interactions that may occur between TCTP and Arabidopsis thaliana proteins was built. This network brings together experimental data of interactions that occur in other eukaryotes and helps us to discuss the possibilities of TCTP involvement in viral infection.
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Affiliation(s)
- Fernanda Prieto Bruckner
- Departamento de Microbiologia/BIOAGRO/National Institute of Science and Technology in Plant‐Pest InteractionsUniversidade Federal de ViçosaViçosaMG36570‐900Brazil
| | - André Da Silva Xavier
- Departamento de Fitopatologia/BIOAGRO/National Institute of Science and Technology in Plant‐Pest InteractionsUniversidade Federal de ViçosaViçosaMG36570‐900Brazil
| | - Renan De Souza Cascardo
- Departamento de Microbiologia/BIOAGRO/National Institute of Science and Technology in Plant‐Pest InteractionsUniversidade Federal de ViçosaViçosaMG36570‐900Brazil
| | - Wagner Campos Otoni
- Departamento de Biologia Vegetal/BIOAGROUniversidade Federal de ViçosaViçosaMG36570‐900Brazil
| | - Francisco Murilo Zerbini
- Departamento de Fitopatologia/BIOAGRO/National Institute of Science and Technology in Plant‐Pest InteractionsUniversidade Federal de ViçosaViçosaMG36570‐900Brazil
| | - Poliane Alfenas‐Zerbini
- Departamento de Microbiologia/BIOAGRO/National Institute of Science and Technology in Plant‐Pest InteractionsUniversidade Federal de ViçosaViçosaMG36570‐900Brazil
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Abstract
The plant vascular system plays a central role in coordinating physiological and developmental events through delivery of both essential nutrients and long-distance signaling agents. The enucleate phloem sieve tube system of the angiosperms contains a broad spectrum of RNA species. Grafting and transcriptomics studies have indicated that several thousand mRNAs move long distances from source organs to meristematic sink tissues. Ribonucleoprotein complexes play a pivotal role as stable RNA-delivery systems for systemic translocation of cargo RNA. In this review, we assess recent progress in the characterization of phloem and plasmodesmal transport as an integrated local and systemic communication network. We discuss the roles of phloem-mobile small RNAs in epigenetic events, including meristem development and genome stability, and the delivery of mRNAs to specific tissues in response to environmental inputs. A large body of evidence now supports a model in which phloem-mobile RNAs act as critical components of gene regulatory networks involved in plant growth, defense, and crop yield at the whole-plant level.
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Affiliation(s)
- Byung-Kook Ham
- Department of Plant Biology, College of Biological Sciences, University of California, Davis, California 95616; ,
| | - William J Lucas
- Department of Plant Biology, College of Biological Sciences, University of California, Davis, California 95616; ,
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Wang J, Jiang L, Wu R. Plant grafting: how genetic exchange promotes vascular reconnection. THE NEW PHYTOLOGIST 2017; 214:56-65. [PMID: 27991666 DOI: 10.1111/nph.14383] [Citation(s) in RCA: 32] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/26/2016] [Accepted: 11/13/2016] [Indexed: 05/17/2023]
Abstract
Grafting has been widely used to improve horticultural traits. It has also served increasingly as a tool to investigate the long-distance transport of molecules that is an essential part for key biological processes. Many studies have revealed the molecular mechanisms of graft-induced phenotypic variation in anatomy, morphology and production. Here, we review the phenomena and their underlying mechanisms by which macromolecules, including RNA, protein, and even DNA, are transported between scions and rootstocks via vascular tissues. We further propose a conceptual framework that characterizes and quantifies the driving mechanisms of scion-rootstock interactions toward vascular reconnection and regeneration.
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Affiliation(s)
- Jing Wang
- Center for Computational Biology, College of Biological Sciences and Technology, Beijing Forestry University, Beijing, 100083, China
| | - Libo Jiang
- Center for Computational Biology, College of Biological Sciences and Technology, Beijing Forestry University, Beijing, 100083, China
| | - Rongling Wu
- Center for Computational Biology, College of Biological Sciences and Technology, Beijing Forestry University, Beijing, 100083, China
- Center for Statistical Genetics, Pennsylvania State University, Hershey, PA, 17033, USA
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Betsch L, Savarin J, Bendahmane M, Szecsi J. Roles of the Translationally Controlled Tumor Protein (TCTP) in Plant Development. Results Probl Cell Differ 2017; 64:149-172. [PMID: 29149407 DOI: 10.1007/978-3-319-67591-6_7] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
Abstract
The Translationally Controlled Tumor Protein (TCTP) is a conserved protein which expression was associated with several biochemical and cellular functions. Loss-of-function mutants are lethal both in animals and in plants, making the identification of its exact role difficult. Recent data using the model plant Arabidopsis thaliana provided the first viable adult knockout for TCTP and helped addressing the biological role of TCTP during organ development and the functional conservation between plants and animals. This chapter summarizes our up to date knowledge about the role of TCTP in plants and discuss about conserved functions and mechanisms between plants and animals.
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Affiliation(s)
- Léo Betsch
- Laboratoire Reproduction et Développement des Plantes, Univ Lyon, ENS de Lyon, Université Claude Bernard Lyon 1, CNRS, INRA, 69342, Lyon, France
| | - Julie Savarin
- Laboratoire Reproduction et Développement des Plantes, Univ Lyon, ENS de Lyon, Université Claude Bernard Lyon 1, CNRS, INRA, 69342, Lyon, France
| | - Mohammed Bendahmane
- Laboratoire Reproduction et Développement des Plantes, Univ Lyon, ENS de Lyon, Université Claude Bernard Lyon 1, CNRS, INRA, 69342, Lyon, France.
| | - Judit Szecsi
- Laboratoire Reproduction et Développement des Plantes, Univ Lyon, ENS de Lyon, Université Claude Bernard Lyon 1, CNRS, INRA, 69342, Lyon, France.
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Chang CH, Hsu FC, Lee SC, Lo YS, Wang JD, Shaw J, Taliansky M, Chang BY, Hsu YH, Lin NS. The Nucleolar Fibrillarin Protein Is Required for Helper Virus-Independent Long-Distance Trafficking of a Subviral Satellite RNA in Plants. THE PLANT CELL 2016; 28:2586-2602. [PMID: 27702772 PMCID: PMC5134973 DOI: 10.1105/tpc.16.00071] [Citation(s) in RCA: 37] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/03/2016] [Revised: 08/30/2016] [Accepted: 09/30/2016] [Indexed: 05/03/2023]
Abstract
RNA trafficking plays pivotal roles in regulating plant development, gene silencing, and adaptation to environmental stress. Satellite RNAs (satRNAs), parasites of viruses, depend on their helper viruses (HVs) for replication, encapsidation, and efficient spread. However, it remains largely unknown how satRNAs interact with viruses and the cellular machinery to undergo trafficking. Here, we show that the P20 protein of Bamboo mosaic potexvirus satRNA (satBaMV) can functionally complement in trans the systemic trafficking of P20-defective satBaMV in infected Nicotiana benthamiana The transgene-derived satBaMV, uncoupled from HV replication, was able to move autonomously across a graft union identified by RT-qPCR, RNA gel blot, and in situ RT-PCR analyses. Coimmunoprecipitation experiments revealed that the major nucleolar protein fibrillarin is coprecipitated in the P20 protein complex. Notably, silencing fibrillarin suppressed satBaMV-, but not HV-, phloem-based movement following grafting or coinoculation with HV Confocal microscopy revealed that the P20 protein colocalized with fibrillarin in the nucleoli and formed punctate structures associated with plasmodesmata. The mobile satBaMV RNA appears to exist as ribonucleoprotein (RNP) complex composed of P20 and fibrillarin, whereas BaMV movement proteins, capsid protein, and BaMV RNA are recruited with HV coinfection. Taken together, our findings provide insight into movement of satBaMV via the fibrillarin-satBaMV-P20 RNP complex in phloem-mediated systemic trafficking.
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Affiliation(s)
- Chih-Hao Chang
- Institute of Plant Biology, National Taiwan University, Taipei 11106, Taiwan
- Institute of Plant and Microbial Biology, Academia Sinica, Taipei 11529, Taiwan
| | - Fu-Chen Hsu
- Institute of Plant and Microbial Biology, Academia Sinica, Taipei 11529, Taiwan
| | - Shu-Chuan Lee
- Institute of Plant and Microbial Biology, Academia Sinica, Taipei 11529, Taiwan
| | - Yih-Shan Lo
- Institute of Plant and Microbial Biology, Academia Sinica, Taipei 11529, Taiwan
| | - Jiun-Da Wang
- Institute of Plant and Microbial Biology, Academia Sinica, Taipei 11529, Taiwan
| | - Jane Shaw
- The James Hutton Institute, Invergowrie, Dundee DD2 5DA, United Kingdom
| | - Michael Taliansky
- The James Hutton Institute, Invergowrie, Dundee DD2 5DA, United Kingdom
| | - Ban-Yang Chang
- Department of Biochemistry, National Chung Hsing University, Taichung 40227, Taiwan
| | - Yau-Heiu Hsu
- Graduate Institute of Biotechnology, National Chung Hsing University, Taichung 40227, Taiwan
| | - Na-Sheng Lin
- Institute of Plant Biology, National Taiwan University, Taipei 11106, Taiwan
- Institute of Plant and Microbial Biology, Academia Sinica, Taipei 11529, Taiwan
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31
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Davern SM, McKnight TE, Standaert RF, Morrell-Falvey JL, Shpak ED, Kalluri UC, Jelenska J, Greenberg JT, Mirzadeh S. Carbon Nanofiber Arrays: A Novel Tool for Microdelivery of Biomolecules to Plants. PLoS One 2016; 11:e0153621. [PMID: 27119338 PMCID: PMC4847769 DOI: 10.1371/journal.pone.0153621] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/22/2016] [Accepted: 03/31/2016] [Indexed: 11/19/2022] Open
Abstract
Effective methods for delivering bioprobes into the cells of intact plants are essential for investigating diverse biological processes. Increasing research on trees, such as Populus spp., for bioenergy applications is driving the need for techniques that work well with tree species. This report introduces vertically aligned carbon nanofiber (VACNF) arrays as a new tool for microdelivery of labeled molecules to Populus leaf tissue and whole plants. We demonstrated that VACNFs penetrate the leaf surface to deliver sub-microliter quantities of solution containing fluorescent or radiolabeled molecules into Populus leaf cells. Importantly, VACNFs proved to be gentler than abrasion with carborundum, a common way to introduce material into leaves. Unlike carborundum, VACNFs did not disrupt cell or tissue integrity, nor did they induce production of hydrogen peroxide, a typical wound response. We show that femtomole to picomole quantities of labeled molecules (fluorescent dyes, small proteins and dextran), ranging from 0.5-500 kDa, can be introduced by VACNFs, and we demonstrate the use of the approach to track delivered probes from their site of introduction on the leaf to distal plant regions. VACNF arrays thus offer an attractive microdelivery method for the introduction of biomolecules and other probes into trees and potentially other types of plants.
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Affiliation(s)
- Sandra M. Davern
- Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee, United States of America
| | - Timothy E. McKnight
- Electrical & Electronics Systems Research Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee, United States of America
| | - Robert F. Standaert
- Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee, United States of America
- Biology & Soft Matter Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee, United States of America
- Department of Biochemistry and Cellular & Molecular Biology, University of Tennessee, Knoxville, Tennessee, United States of America
| | - Jennifer L. Morrell-Falvey
- Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee, United States of America
- Department of Biochemistry and Cellular & Molecular Biology, University of Tennessee, Knoxville, Tennessee, United States of America
| | - Elena D. Shpak
- Department of Biochemistry and Cellular & Molecular Biology, University of Tennessee, Knoxville, Tennessee, United States of America
| | - Udaya C. Kalluri
- Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee, United States of America
| | - Joanna Jelenska
- Department of Molecular Genetics and Cell Biology, The University of Chicago, Chicago, Illinois, United States of America
| | - Jean T. Greenberg
- Department of Molecular Genetics and Cell Biology, The University of Chicago, Chicago, Illinois, United States of America
| | - Saed Mirzadeh
- Nuclear Security & Isotope Technology Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee, United States of America
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32
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Zhang Z, Zheng Y, Ham BK, Chen J, Yoshida A, Kochian LV, Fei Z, Lucas WJ. Vascular-mediated signalling involved in early phosphate stress response in plants. NATURE PLANTS 2016; 2:16033. [PMID: 27249565 DOI: 10.1038/nplants.2016.33] [Citation(s) in RCA: 39] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/28/2015] [Accepted: 02/13/2016] [Indexed: 05/09/2023]
Abstract
Depletion of finite global rock phosphate (Pi) reserves will impose major limitations on future agricultural productivity and food security. Hence, modern breeding programmes seek to develop Pi-efficient crops with sustainable yields under reduced Pi fertilizer inputs. In this regard, although the long-term responses of plants to Pi stress are well documented, the early signalling events have yet to be elucidated. Here, we show plant tissue-specific responses to early Pi stress at the transcription level and a predominant role of the plant vascular system in this process. Specifically, imposition of Pi stress induces rapid and major changes in the mRNA population in the phloem translocation stream, and grafting studies have revealed that many hundreds of phloem-mobile mRNAs are delivered to specific sink tissues. We propose that the shoot vascular system acts as the site of root-derived Pi stress perception, and the phloem serves to deliver a cascade of signals to various sinks, presumably to coordinate whole-plant Pi homeostasis.
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Affiliation(s)
- Zhaoliang Zhang
- Department of Plant Biology, College of Biological Sciences, University of California, Davis, California, USA
| | - Yi Zheng
- Boyce Thompson Institute for Plant Research, Cornell University, Ithaca, New York, USA
| | - Byung-Kook Ham
- Department of Plant Biology, College of Biological Sciences, University of California, Davis, California, USA
| | - Jieyu Chen
- Department of Plant Biology, College of Biological Sciences, University of California, Davis, California, USA
| | - Akiko Yoshida
- Department of Plant Biology, College of Biological Sciences, University of California, Davis, California, USA
- Department of Agricultural and Environmental Biology, Graduate School of Agricultural and Life Sciences, University of Tokyo, Bunkyo-ku, Tokyo, Japan
| | - Leon V Kochian
- USDA-ARS Robert W. Holley Center for Agriculture and Health, Cornell University, Ithaca, New York, USA
| | - Zhangjun Fei
- Boyce Thompson Institute for Plant Research, Cornell University, Ithaca, New York, USA
| | - William J Lucas
- Department of Plant Biology, College of Biological Sciences, University of California, Davis, California, USA
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33
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Imamura T, Sekine KT, Yamashita T, Kusano H, Shimada H. Production of recombinant thanatin in watery rice seeds that lack an accumulation of storage starch and proteins. J Biotechnol 2016; 219:28-33. [PMID: 26689479 DOI: 10.1016/j.jbiotec.2015.12.006] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2015] [Revised: 12/08/2015] [Accepted: 12/10/2015] [Indexed: 10/22/2022]
Abstract
Molecular farming is a promising method for producing materials of commercial interest. Plants can be expected to be appropriate hosts for recombinant protein production. However, production in genetically modified plants has two major challenges that must be resolved before its practical use: insufficient accumulation of products and difficulty in establishing methods for their purification. We propose a simple procedure for the production of a desired protein using watery rice seeds lacking an accumulation of storage starch and proteins, a phenotype induced by the introduction of an antisense SPK. We produced a transgenic rice plant containing a gene for an antimicrobial peptide, thanatin, together with antisense SPK. Bioassay and proteome analysis indicated that recombinant thanatin accumulated in an active form in these watery rice seeds. These results suggest that our system worked effectively for the production of thanatin. This procedure enabled easy removal of impurities and simplified the purification process compared with production in leaves. Our system may therefore be a useful technique for the production of desired materials, including proteins.
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Affiliation(s)
- Tomohiro Imamura
- Department of Biological Science and Technology, Tokyo University of Science, 6-3-1 Niijuku, Katsushika, Tokyo 125-8585, Japan
| | - Ken-Taro Sekine
- Iwate Biotechnology Research Center, 22-174-4 Narita, Kitakami, Iwate 024-0003, Japan
| | - Tetsuro Yamashita
- Faculty of Agriculture, Iwate University, 3-18-8 Ueda, Morioka, Iwate 020-8550, Japan
| | - Hiroaki Kusano
- Department of Biological Science and Technology, Tokyo University of Science, 6-3-1 Niijuku, Katsushika, Tokyo 125-8585, Japan
| | - Hiroaki Shimada
- Department of Biological Science and Technology, Tokyo University of Science, 6-3-1 Niijuku, Katsushika, Tokyo 125-8585, Japan.
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34
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Saplaoura E, Kragler F. Mobile Transcripts and Intercellular Communication in Plants. DEVELOPMENTAL SIGNALING IN PLANTS 2016; 40:1-29. [DOI: 10.1016/bs.enz.2016.07.001] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
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35
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Deng Z, Chen J, Leclercq J, Zhou Z, Liu C, Liu H, Yang H, Montoro P, Xia Z, Li D. Expression Profiles, Characterization and Function of HbTCTP in Rubber Tree (Hevea brasiliensis). FRONTIERS IN PLANT SCIENCE 2016; 7:789. [PMID: 27375647 PMCID: PMC4896220 DOI: 10.3389/fpls.2016.00789] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/25/2016] [Accepted: 05/22/2016] [Indexed: 05/21/2023]
Abstract
As a highly conserved protein, the translationally controlled tumor protein (TCTP) carries out vital roles in various life processes. In rubber tree, two TCTP genes, HbTCTP and HbTCTP1, were cloned, but only HbTCTP1 was studied in details. In this study, cis-acting regulatory elements, expression patterns, subcellular localization, interacting proteins, and antioxidant activity of HbTCTP were systematically analyzed. Besides the common cis-acting regulatory elements, HbTCTP promoter also harbored various known cis-elements that respond to hormone/stresses. Being consistent with the aforementioned results, HbTCTP was regulated by drought, low temperature, high salt, ethylene (ET), wounding, H2O2, and methyl jasmonate (MeJA) treatments. HbTCTP was expressed throughout different tissues and developmental stages of leaves. In addition, HbTCTP was associated with tapping panel dryness (TPD). HbTCTP was localized in the membrane, cytoplasm and the nucleus, and interacted with four proteins rubber elongation factor (REF), 17.5 kDa heat shock family protein, annexin, and REF-like stress related protein 1. Being similar to HbTCTP1, HbTCTP also indicated antioxidant activity in metal-catalyzed oxidation (MCO) system. Our results are useful for further understanding the molecular characterization and expression profiles of HbTCTP, but also lay a solid foundation for elucidating the function of HbTCTP in rubber tree.
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Affiliation(s)
- Zhi Deng
- Key Laboratory of Biology and Genetic Resources of Rubber Tree, Ministry of Agriculture, Rubber Research Institute, Chinese Academy of Tropical Agricultural SciencesDanzhou, China
| | - Jiangshu Chen
- Key Laboratory of Biology and Genetic Resources of Rubber Tree, Ministry of Agriculture, Rubber Research Institute, Chinese Academy of Tropical Agricultural SciencesDanzhou, China
- Hainan Key Laboratory for Sustainable Utilization of Tropical Bioresources, College of Agriculture, Hainan UniversityHaikou, China
| | | | - Zhuangzhi Zhou
- State Key Laboratory of Plant Genomics and National Center for Plant Gene Research, Institute of Genetics and Developmental Biology, Chinese Academy of SciencesBeijing, China
| | - Changren Liu
- Key Laboratory of Biology and Genetic Resources of Rubber Tree, Ministry of Agriculture, Rubber Research Institute, Chinese Academy of Tropical Agricultural SciencesDanzhou, China
- Hainan Key Laboratory for Sustainable Utilization of Tropical Bioresources, College of Agriculture, Hainan UniversityHaikou, China
| | - Hui Liu
- Key Laboratory of Biology and Genetic Resources of Rubber Tree, Ministry of Agriculture, Rubber Research Institute, Chinese Academy of Tropical Agricultural SciencesDanzhou, China
| | - Hong Yang
- Key Laboratory of Biology and Genetic Resources of Rubber Tree, Ministry of Agriculture, Rubber Research Institute, Chinese Academy of Tropical Agricultural SciencesDanzhou, China
| | | | - Zhihui Xia
- Hainan Key Laboratory for Sustainable Utilization of Tropical Bioresources, College of Agriculture, Hainan UniversityHaikou, China
- *Correspondence: Zhihui Xia
| | - Dejun Li
- Key Laboratory of Biology and Genetic Resources of Rubber Tree, Ministry of Agriculture, Rubber Research Institute, Chinese Academy of Tropical Agricultural SciencesDanzhou, China
- Dejun Li
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36
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LeBlanc M, Kim G, Patel B, Stromberg V, Westwood J. Quantification of tomato and Arabidopsis mobile RNAs trafficking into the parasitic plant Cuscuta pentagona. THE NEW PHYTOLOGIST 2013; 200:1225-33. [PMID: 23914903 DOI: 10.1111/nph.12439] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/17/2013] [Accepted: 06/30/2013] [Indexed: 05/02/2023]
Abstract
The cross-species movement of mRNA from hosts to the parasitic plant Cuscuta pentagona has been reported previously, but has not been characterized quantitatively or with attention to uptake patterns and the fate of specific mRNAs. Real-time PCR and RNA-Seq approaches were used to identify and characterize mobile transcripts from tomato and Arabidopsis hosts into C. pentagona. Tomato transcripts of Gibberellic Acid Insensitive (SlGAI) and Cathepsin D Proteinase Inhibitor (SlPI) differed significantly in the rate of uptake into the parasite, but were then distributed over the length of the parasite shoot. When parasite shoots were detached from the hosts, the SlPI transcript concentrations in the parasite showed the greatest decrease within the first 8 h. Arabidopsis transcripts also varied in mobility into the parasite, and assay of specific regions of a Salt-inducible Zinc Finger Protein (AtSZF1) transcript revealed distinct patterns of abundance in the parasite. The uptake and distribution of host mRNAs into C. pentagona appears to vary among mRNAs, and perhaps even with the region of the mRNA under investigation. We propose that mRNAs traffic into the parasite via multiple routes, or that other mechanisms for selective uptake and mobility exist between host and parasite.
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Affiliation(s)
- Megan LeBlanc
- Department of Plant Pathology, Physiology and Weed Science, Virginia Polytechnic Institute and State University, Blacksburg, VA, 24061, USA
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37
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Henner P, Hurtevent P, Thiry Y, Levchuk S, Yoschenko V, Kashparov V. Translocation of (125)I, (75)Se and (36)Cl to edible parts of radish, potato and green bean following wet foliar contamination under field conditions. JOURNAL OF ENVIRONMENTAL RADIOACTIVITY 2013; 124:171-84. [PMID: 23811127 DOI: 10.1016/j.jenvrad.2013.05.012] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/08/2013] [Revised: 05/31/2013] [Accepted: 05/31/2013] [Indexed: 05/22/2023]
Abstract
Specific translocation factor values (ftr) for (129)I, (79)Se and (36)Cl following foliar transfer are still missing from the IAEA reference databases. The translocation of the short-lived isotopes, (125)I, (75)Se, and (36)Cl, to radish, potato and green bean edible parts was measured under field conditions following acute and chronic wet foliar contamination at various plant growth stages in the absence of leaching caused by rain. The translocation factors obtained for (125)I ranged from 0.8 to 2.6% for radish, from 0.1 to 2.3% for potato and from 0.1 to 2.6% for bean. The translocation factors obtained for (75)Se ranged from 6.3 to 21% for radish, from 1.6 to 32.6% for potato and from 7.7 to 22.8% for bean (values similar to Cs or even higher). The translocation factors obtained for (36)Cl were close to those for (75)Se and ranged from 4.3 to 28.8% for radish, from 0.5 to 31.5% for potato and from 4.3 to 16.3% for bean. Iodide showed the lowest apparent mobility because of its preferential fixation in or on the leaves and a significant amount was probably volatilized. Selenite internal transfer was significant and possibly followed the sulfur metabolic pathway. Chloride was very mobile and quickly diffused throughout the plant. The translocation factors varied with the growth stage and depended on the development state of the edible tissue and its associated sink strength for nutrients and assimilates. For radish, translocation was high during the early vegetative stages. For potato, wheat and bean, a major peak in translocation was seen during the flowering growth stage and the concomitant growth of potato tubers. An additive effect of successive contamination events on translocated elements was shown in radish but not in bean and potato. The highest translocation value obtained for an acute contamination event was shown to be an adequate, conservative indicator of chronic contamination in absence of specific values. Due to the absence of rain leaching during the experiment this study probably provides translocation values among the highest that could be recorded.
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Affiliation(s)
- P Henner
- French Institute for Radiological Protection and Nuclear Safety (IRSN), PRP-ENV/SERIS/L2BT, CE Cadarache bt 186, BP 3, 13115 Saint-Paul-lez-Durance, France.
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38
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Hinojosa-Moya JJ, Xoconostle-Cázares B, Toscano-Morales R, Ramírez-Ortega F, Luis Cabrera-Ponce J, Ruiz-Medrano R. Characterization of the pumpkin Translationally-Controlled Tumor Protein CmTCTP. PLANT SIGNALING & BEHAVIOR 2013; 8:e26477. [PMID: 24065051 PMCID: PMC4091340 DOI: 10.4161/psb.26477] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/04/2013] [Accepted: 09/13/2013] [Indexed: 05/17/2023]
Abstract
In higher plants, the phloem plays a central role in the delivery of nutrients and signals from source to sink tissues. These signals likely coordinate different aspects of plant development, as well as its response to environmental cues. Although some phloem-transported proteins and RNAs may function as signaling molecules in plants, their mode of action remains poorly understood. Previous analysis of transcripts from CMV-infected pumpkin (Cucurbita maxima cv Big Max) identified a Translationally-Controlled Tumor Protein (TCTP) mRNA homolog, designated CmTCTP. In the present work this transcript was analyzed in terms of its expression pattern. This RNA accumulates, both in healthy and CMV-infected plants, in developing and mature phloem in petiole and roots, as well as in apices at high levels. The protein was present at lower levels in most cell types, and almost no signal was detected in apices, suggesting translational regulation of this RNA. Additionally, CmTCTP harbored by Agrobacterium rhizogenes is capable of inducing whole plant regeneration. These data suggest a role for CmTCTP in growth regulation, possibly through long-distance signaling.
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Affiliation(s)
- J Jesús Hinojosa-Moya
- Departamento de Biotecnología y Bioingeniería; CINVESTAV- IPN; Zacatenco, D.F. Mexico
- Facultad de Ingeniería Química; Benemérita Universidad Autónoma de Puebla; Colonia San Manuel; Ciudad Universitaria; Puebla, México
| | | | | | | | - José Luis Cabrera-Ponce
- Departamento de Ingeniería Genética de Plantas; CINVESTAV-IPN Unidad Guanajuato; Irapuato, Guanajuato México
| | - Roberto Ruiz-Medrano
- Departamento de Biotecnología y Bioingeniería; CINVESTAV- IPN; Zacatenco, D.F. Mexico
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Hoepflinger MC, Reitsamer J, Geretschlaeger AM, Mehlmer N, Tenhaken R. The effect of translationally controlled tumour protein (TCTP) on programmed cell death in plants. BMC PLANT BIOLOGY 2013; 13:135. [PMID: 24040826 PMCID: PMC3847524 DOI: 10.1186/1471-2229-13-135] [Citation(s) in RCA: 40] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/05/2012] [Accepted: 09/12/2013] [Indexed: 05/25/2023]
Abstract
BACKGROUND Translationally controlled tumour protein (TCTP), a well known protein of the animal kingdom, was shown to be a Ca(2+)-binding protein with important functions in many different cellular processes (e.g. protection against stress and apoptosis, cell growth, cell cycle progression, and microtubule organization). However, only little is known about TCTP in plants. Transcript and protein levels of plant TCTPs were shown to be altered by various stress conditions (e.g. cold, salt, draught, aluminium, and pathogen infection), and Arabidopsis thaliana TCTP (AtTCTP) was described as an important regulator of growth. The aim of this study was to further characterize plant TCTP relating to one of its major functions in animals: the protection against cell death. RESULTS We used two different activators of programmed cell death (PCD) in plants: the mammalian pro-apoptotic protein BAX and tunicamycin, an inhibitor of glycosylation and trigger of unfolded protein response (UPR). Over-expression of AtTCTP significantly decreased cell death in tobacco leaf discs in both studies. A (45)Ca overlay assay showed AtTCTP to be a Ca(2+)-binding protein and localization experiments revealed cytosolic distribution of AtTCTP-GFP in Arabidopsis seedlings. CONCLUSIONS Our study showed cytoprotective effects of plant TCTP for the first time. Furthermore, we showed the ability of AtTCTP to bind to Ca(2+) and its cytosolic distribution within the cell. If these results are combined, two putative modes of action can be assumed: 1) AtTCTP acts as Ca(2+) sequester, preventing PCD by reducing cytosolic Ca(2+) levels as described for animals. 2) AtTCTP could directly or indirectly interact with other cytosolic or membrane-bound proteins of the cell death machinery, thereby inhibiting cell death progression. As no homologous proteins of the anti-apoptotic machinery of animals were found in plants, and functional homologues still remain to be elucidated, future work will provide more insight.
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Affiliation(s)
- Marion Christine Hoepflinger
- Department of Cell Biology, Division of Plant Physiology, University of Salzburg, Hellbrunnerstraße 34, 5020 Salzburg, Austria
| | - Johannes Reitsamer
- Department of Cell Biology, Division of Plant Physiology, University of Salzburg, Hellbrunnerstraße 34, 5020 Salzburg, Austria
| | - Anja Maria Geretschlaeger
- Department of Cell Biology, Division of Plant Physiology, University of Salzburg, Hellbrunnerstraße 34, 5020 Salzburg, Austria
| | - Norbert Mehlmer
- Department of Biology I, Botany, LMU Munich, 82152 Martinsried, Germany
| | - Raimund Tenhaken
- Department of Cell Biology, Division of Plant Physiology, University of Salzburg, Hellbrunnerstraße 34, 5020 Salzburg, Austria
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40
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Smith HM, Samach A. Constraints to obtaining consistent annual yields in perennial tree crops. I: Heavy fruit load dominates over vegetative growth. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2013; 207:158-67. [PMID: 23602111 DOI: 10.1016/j.plantsci.2013.02.014] [Citation(s) in RCA: 41] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/27/2012] [Revised: 02/20/2013] [Accepted: 02/23/2013] [Indexed: 05/08/2023]
Abstract
Farmers lack effective methods to achieve and maintain stable production from year to year in many commercial fruit crops. Annual fruit yield within a region often alternates between high and low fruit load and is termed alternate bearing. The underlying cause of alternate bearing is the negative impact of high fruit load on vegetative growth and next year's flowering. In this review, we emphasize common responses of diverse perennials to heavy crop load. We present botanical, ecological and horticultural perspectives on irregular bearing. The later part of this review focuses on understanding how high fruit load dominates over vegetative growth. We discuss sink strengths and putative mobile signals (hormones), perhaps seed-derived. We highlight gaps in current understanding of alternate bearing, and discuss new approaches to better understand fruit load dominance. Assuming the effect of high fruit load may be related to other mechanisms of sink partitioning, other forms of dominance are presented such as apical, first fruit and king fruit dominance. Dominance seems to be enforced, in independent cases through the establishment of a polar auxin transport system from the stronger sink. Once established this somehow perturbs the transport of auxin out of weaker sinks. Possibly, fruit derived auxin may alter the polar auxin transport system of the shoot to inhibit shoot growth.
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Affiliation(s)
- Harley M Smith
- CSIRO Plant Industry, Waite Campus, PO Box 350, Glen Osmond, South Australia 5064, Australia
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41
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Lucas WJ, Groover A, Lichtenberger R, Furuta K, Yadav SR, Helariutta Y, He XQ, Fukuda H, Kang J, Brady SM, Patrick JW, Sperry J, Yoshida A, López-Millán AF, Grusak MA, Kachroo P. The plant vascular system: evolution, development and functions. JOURNAL OF INTEGRATIVE PLANT BIOLOGY 2013; 55:294-388. [PMID: 23462277 DOI: 10.1111/jipb.12041] [Citation(s) in RCA: 400] [Impact Index Per Article: 36.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/18/2023]
Abstract
The emergence of the tracheophyte-based vascular system of land plants had major impacts on the evolution of terrestrial biology, in general, through its role in facilitating the development of plants with increased stature, photosynthetic output, and ability to colonize a greatly expanded range of environmental habitats. Recently, considerable progress has been made in terms of our understanding of the developmental and physiological programs involved in the formation and function of the plant vascular system. In this review, we first examine the evolutionary events that gave rise to the tracheophytes, followed by analysis of the genetic and hormonal networks that cooperate to orchestrate vascular development in the gymnosperms and angiosperms. The two essential functions performed by the vascular system, namely the delivery of resources (water, essential mineral nutrients, sugars and amino acids) to the various plant organs and provision of mechanical support are next discussed. Here, we focus on critical questions relating to structural and physiological properties controlling the delivery of material through the xylem and phloem. Recent discoveries into the role of the vascular system as an effective long-distance communication system are next assessed in terms of the coordination of developmental, physiological and defense-related processes, at the whole-plant level. A concerted effort has been made to integrate all these new findings into a comprehensive picture of the state-of-the-art in the area of plant vascular biology. Finally, areas important for future research are highlighted in terms of their likely contribution both to basic knowledge and applications to primary industry.
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Affiliation(s)
- William J Lucas
- Department of Plant Biology, College of Biological Sciences, University of California, Davis, CA 95616, USA.
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42
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Turnbull CGN, Lopez-Cobollo RM. Heavy traffic in the fast lane: long-distance signalling by macromolecules. THE NEW PHYTOLOGIST 2013; 198:33-51. [PMID: 23398598 DOI: 10.1111/nph.12167] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/08/2012] [Accepted: 12/21/2012] [Indexed: 05/05/2023]
Abstract
The two major vascular conduits in plants, the xylem and phloem, theoretically provide opportunities for the long-distance translocation of almost any type of water-borne molecule. This review focuses on the signalling functions conveyed by the movement of macromolecules. Here, a signal is defined as the communication of information from source to destination, where it modifies development, physiology or defence through altered gene expression or by direct influences on other cellular processes. Xylem and phloem sap both contain diverse classes of proteins; in addition, phloem contains many full-length and small RNA species. Only a few of these mobile molecules have proven functions in signalling. The transduction of signals typically depends on connection to appropriate signalling pathways. Incoming protein signals require specific detection systems, generally via receptors. Mobile RNAs require either the translation or presence of a homologous target. Given that phloem sieve elements are enucleate and lack translation machinery, RNA function requires subsequent unloading at least into adjacent companion cells. The binding of RNA by proteins in ribonucleoprotein complexes enables the translocation of some signals, with evidence for both sequence-specific and size-specific binding. Several examples of long-distance macromolecular signalling are highlighted, including the FT protein signal which regulates flowering time and other developmental switches.
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Affiliation(s)
- Colin G N Turnbull
- Department of Life Sciences, Imperial College London, London, SW7 2AZ, UK
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43
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Li D, Deng Z, Liu X, Qin B. Molecular cloning, expression profiles and characterization of a novel translationally controlled tumor protein in rubber tree (Hevea brasiliensis). JOURNAL OF PLANT PHYSIOLOGY 2013; 170:497-504. [PMID: 23273927 DOI: 10.1016/j.jplph.2012.11.014] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/05/2012] [Revised: 11/08/2012] [Accepted: 11/10/2012] [Indexed: 05/04/2023]
Abstract
The translationally controlled tumor protein (TCTP) is a multi-functioning protein that carries out vital roles in various life processes. In this study, a new TCTP gene, designated as HbTCTP1, was isolated in Hevea brasiliensis. The full-length complementary DNA (cDNA) of HbTCTP1 contained a maximum open reading frame (ORF) of 507base pair (bp) encoding 168 amino acids. The sequence comparison showed that the deduced HbTCTP1 indicated high identities to plant TCTP proteins, and clustered in the dicot cluster of plant TCTPs. Although HbTCTP1 and human TCTP proteins did not parallel in overall sequence similarity, they indicated highly similar 3D structures with a nearly identical spatial organization of α-helices, β-sheets, and coil regions. Real time reverse-transcription PCR (RT-PCR) analyses showed that HbTCTP1 was expressed throughout different tissues and developmental stages of leaves. Besides being related to tapping panel dryness (TPD), the HbTCTP1 transcripts were regulated by various treatments, including drought, low temperature, high salt, ethrel (ET), wounding, H2O2, and methyl jasmonate (Me-JA) treatments. The recombinant HbTCTP1 fusion protein was shown to protect supercoiled plasmid DNA from damages induced by metal-catalyzed generation of reactive oxygen species. The (45)Ca(2+)-overlay assay showed that HbTCTP1 was a calcium-binding protein. Our results are greatly helpful in understanding the molecular characterization and expression profiles of HbTCTP1, and lay the foundation for further analyzing the function of HbTCTP1 in rubber tree.
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Affiliation(s)
- Dejun Li
- Key Laboratory of Biology and Genetic Resources of Rubber Tree, Ministry of Agriculture, Rubber Research Institute, Chinese Academy of Tropical Agricultural Sciences, Danzhou, Hainan 571737, China.
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44
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Pallas V, Gómez G. Phloem RNA-binding proteins as potential components of the long-distance RNA transport system. FRONTIERS IN PLANT SCIENCE 2013; 4:130. [PMID: 23675378 PMCID: PMC3650515 DOI: 10.3389/fpls.2013.00130] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/07/2013] [Accepted: 04/20/2013] [Indexed: 05/19/2023]
Abstract
RNA-binding proteins (RBPs) govern a myriad of different essential processes in eukaryotic cells. Recent evidence reveals that apart from playing critical roles in RNA metabolism and RNA transport, RBPs perform a key function in plant adaptation to various environmental conditions. Long-distance RNA transport occurs in land plants through the phloem, a conducting tissue that integrates the wide range of signaling pathways required to regulate plant development and response to stress processes. The macromolecules in the phloem pathway vary greatly and include defense proteins, transcription factors, chaperones acting in long-distance trafficking, and RNAs (mRNAs, siRNAs, and miRNAs). How these RNA molecules translocate through the phloem is not well understood, but recent evidence indicates the presence of translocatable RBPs in the phloem, which act as potential components of long-distance RNA transport system. This review updates our knowledge on the characteristics and functions of RBPs present in the phloem.
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Affiliation(s)
- Vicente Pallas
- *Correspondence: Vicente Pallas, Instituto de Biologïa Molecular y Celular de Plantas, Consejo Superior de Investigaciones Cientïficas-Universidad Politécnica de Valencia, Ciudad Politécnica de la Innovación – Avenida Ingeniero Fausto Elio s/n, 46022 Valencia, Spain. e-mail:
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45
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Gaupels F, Sarioglu H, Beckmann M, Hause B, Spannagl M, Draper J, Lindermayr C, Durner J. Deciphering systemic wound responses of the pumpkin extrafascicular phloem by metabolomics and stable isotope-coded protein labeling. PLANT PHYSIOLOGY 2012; 160:2285-99. [PMID: 23085839 PMCID: PMC3510148 DOI: 10.1104/pp.112.205336] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/10/2012] [Accepted: 10/18/2012] [Indexed: 05/22/2023]
Abstract
In cucurbits, phloem latex exudes from cut sieve tubes of the extrafascicular phloem (EFP), serving in defense against herbivores. We analyzed inducible defense mechanisms in the EFP of pumpkin (Cucurbita maxima) after leaf damage. As an early systemic response, wounding elicited transient accumulation of jasmonates and a decrease in exudation probably due to partial sieve tube occlusion by callose. The energy status of the EFP was enhanced as indicated by increased levels of ATP, phosphate, and intermediates of the citric acid cycle. Gas chromatography coupled to mass spectrometry also revealed that sucrose transport, gluconeogenesis/glycolysis, and amino acid metabolism were up-regulated after wounding. Combining ProteoMiner technology for the enrichment of low-abundance proteins with stable isotope-coded protein labeling, we identified 51 wound-regulated phloem proteins. Two Sucrose-Nonfermenting1-related protein kinases and a 32-kD 14-3-3 protein are candidate central regulators of stress metabolism in the EFP. Other proteins, such as the Silverleaf Whitefly-Induced Protein1, Mitogen Activated Protein Kinase6, and Heat Shock Protein81, have known defensive functions. Isotope-coded protein labeling and western-blot analyses indicated that Cyclophilin18 is a reliable marker for stress responses of the EFP. As a hint toward the induction of redox signaling, we have observed delayed oxidation-triggered polymerization of the major Phloem Protein1 (PP1) and PP2, which correlated with a decline in carbonylation of PP2. In sum, wounding triggered transient sieve tube occlusion, enhanced energy metabolism, and accumulation of defense-related proteins in the pumpkin EFP. The systemic wound response was mediated by jasmonate and redox signaling.
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Affiliation(s)
- Frank Gaupels
- Institute of Biochemical Plant Pathology, Helmholtz Zentrum München, German Research Center for Environmental Health, D-85764 Neuherberg, Germany.
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46
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Wang L, Yang M, Akinnagbe A, Liang H, Wang J, Ewald D. Bacillus thuringiensis protein transfer between rootstock and scion of grafted poplar. PLANT BIOLOGY (STUTTGART, GERMANY) 2012; 14:745-50. [PMID: 22372666 DOI: 10.1111/j.1438-8677.2011.00555.x] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/20/2023]
Abstract
Bacillus thuringiensis (Bt) Cry1Ac protein is a toxin against different leaf-eating lepidopteran insects that attack poplar trees. In the present study, the mode of migration of the Bt-Cry1Ac protein within poplar grafts was investigated. Grafting was done using Pb29 (transgenic poplar 741 with cry1Ac genes), CC71 (transgenic poplar 741 with cry3A genes), non-transgenic poplar 741 and non-transgenic Populus tomentosa, either as scion or as rootstock. In order to detect migration of Bt-Cry1Ac protein from one portion of the graft union to different tissues in the grafted plant, ELISA analysis was employed to assess the content of Bt-Cry1Ac protein in the phloem, xylem, pith and leaves of the grafted poplar. To further verify migration of Bt-Cry1Ac protein, Clostera anachoreta larvae, which are susceptible to Bt-Cry1Ac protein, were fed leaves from the control graft (i.e., graft portion that originally did not contain Bt-Cry1Ac protein). The results showed that Bt-Cry1Ac protein was transported between rootstock and scion mainly through the phloem. Migration of Bt-Cry1Ac protein in the grafted union was also evidenced in that the leaves of the control graft did have a lethal effect on C. anachoreta larvae in laboratory feeding experiments.
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Affiliation(s)
- L Wang
- Institute of Forest Biotechnology, Forestry College, Agricultural University of Hebei, Baoding, China College of Horticulture, Hebei North University, Zhangjiakou, China Department of Forestry & Wood Technology, Federal University of Technology, Akure, Nigeria Institute of Forest Genetics, Johann Heinrich von Thuenen Institute Federal Research Institute for Rural Areas, Forestry and Fisheries, Waldsieversdorf, Germany
| | - M Yang
- Institute of Forest Biotechnology, Forestry College, Agricultural University of Hebei, Baoding, China College of Horticulture, Hebei North University, Zhangjiakou, China Department of Forestry & Wood Technology, Federal University of Technology, Akure, Nigeria Institute of Forest Genetics, Johann Heinrich von Thuenen Institute Federal Research Institute for Rural Areas, Forestry and Fisheries, Waldsieversdorf, Germany
| | - A Akinnagbe
- Institute of Forest Biotechnology, Forestry College, Agricultural University of Hebei, Baoding, China College of Horticulture, Hebei North University, Zhangjiakou, China Department of Forestry & Wood Technology, Federal University of Technology, Akure, Nigeria Institute of Forest Genetics, Johann Heinrich von Thuenen Institute Federal Research Institute for Rural Areas, Forestry and Fisheries, Waldsieversdorf, Germany
| | - H Liang
- Institute of Forest Biotechnology, Forestry College, Agricultural University of Hebei, Baoding, China College of Horticulture, Hebei North University, Zhangjiakou, China Department of Forestry & Wood Technology, Federal University of Technology, Akure, Nigeria Institute of Forest Genetics, Johann Heinrich von Thuenen Institute Federal Research Institute for Rural Areas, Forestry and Fisheries, Waldsieversdorf, Germany
| | - J Wang
- Institute of Forest Biotechnology, Forestry College, Agricultural University of Hebei, Baoding, China College of Horticulture, Hebei North University, Zhangjiakou, China Department of Forestry & Wood Technology, Federal University of Technology, Akure, Nigeria Institute of Forest Genetics, Johann Heinrich von Thuenen Institute Federal Research Institute for Rural Areas, Forestry and Fisheries, Waldsieversdorf, Germany
| | - D Ewald
- Institute of Forest Biotechnology, Forestry College, Agricultural University of Hebei, Baoding, China College of Horticulture, Hebei North University, Zhangjiakou, China Department of Forestry & Wood Technology, Federal University of Technology, Akure, Nigeria Institute of Forest Genetics, Johann Heinrich von Thuenen Institute Federal Research Institute for Rural Areas, Forestry and Fisheries, Waldsieversdorf, Germany
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Ponciano G, McMahan CM, Xie W, Lazo GR, Coffelt TA, Collins-Silva J, Nural-Taban A, Gollery M, Shintani DK, Whalen MC. Transcriptome and gene expression analysis in cold-acclimated guayule (Parthenium argentatum) rubber-producing tissue. PHYTOCHEMISTRY 2012; 79:57-66. [PMID: 22608127 DOI: 10.1016/j.phytochem.2012.04.007] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/06/2011] [Revised: 03/02/2012] [Accepted: 04/18/2012] [Indexed: 06/01/2023]
Abstract
Natural rubber biosynthesis in guayule (Parthenium argentatum Gray) is associated with moderately cold night temperatures. To begin to dissect the molecular events triggered by cold temperatures that govern rubber synthesis induction in guayule, the transcriptome of bark tissue, where rubber is produced, was investigated. A total of 11,748 quality expressed sequence tags (ESTs) were obtained. The vast majority of ESTs encoded proteins that are similar to stress-related proteins, whereas those encoding rubber biosynthesis-related proteins comprised just over one percent of the ESTs. Sequence information derived from the ESTs was used to design primers for quantitative analysis of the expression of genes that encode selected enzymes and proteins with potential impact on rubber biosynthesis in field-grown guayule plants, including 3-hydroxy-3-methylglutaryl-CoA synthase, 3-hydroxy-3-methylglutaryl-CoA reductase, farnesyl pyrophosphate synthase, squalene synthase, small rubber particle protein, allene oxide synthase, and cis-prenyl transferase. Gene expression was studied for field-grown plants during the normal course of seasonal variation in temperature (monthly average maximum 41.7 °C to minimum 0 °C, from November 2005 through March 2007) and rubber transferase enzymatic activity was also evaluated. Levels of gene expression did not correlate with air temperatures nor with rubber transferase activity. Interestingly, a sudden increase in night temperature 10 days before harvest took place in advance of the highest CPT gene expression level.
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Affiliation(s)
- Grisel Ponciano
- Western Regional Research Center, USDA-ARS, 800 Buchanan Street, Albany, CA 94710, USA
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48
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Poltronieri P, Santino A. Non-coding RNAs in Intercellular and Systemic Signaling. FRONTIERS IN PLANT SCIENCE 2012; 3:141. [PMID: 22783264 PMCID: PMC3389742 DOI: 10.3389/fpls.2012.00141] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/17/2012] [Accepted: 06/11/2012] [Indexed: 05/08/2023]
Affiliation(s)
- Palmiro Poltronieri
- Department of Biology and Agriculture, CNR-ISPA, National Research Council of ItalyLecce, Italy
- *Correspondence:
| | - Angelo Santino
- Department of Biology and Agriculture, CNR-ISPA, National Research Council of ItalyLecce, Italy
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Ingram P, Dettmer J, Helariutta Y, Malamy JE. Arabidopsis Lateral Root Development 3 is essential for early phloem development and function, and hence for normal root system development. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2011; 68:455-467. [PMID: 21749503 DOI: 10.1111/j.1365-313x.2011.04700.x] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/31/2023]
Abstract
We have identified a gene, Lateral Root Development 3 (LRD3), that is important for maintaining a balance between primary and lateral root growth. The lrd3 mutant has decreased primary root growth and increased lateral root growth. We determined that the LRD3 gene encodes a LIM-domain protein of unknown function. LRD3 is expressed only in the phloem companion cells, which suggested a role in phloem function. Indeed, while phloem loading and export from the shoot appear to be normal, delivery of phloem to the primary root tip is limited severely in young seedlings. Abnormalities in phloem morphology in these seedlings indicate that LRD3 is essential for correct early phloem development. There is a subsequent spontaneous recovery of normal phloem morphology, which is correlated tightly with increased phloem delivery and growth of the primary root. The LRD3 gene is one of very few genes described to affect phloem development, and the only one that is specific to early phloem development. Continuous growth on auxin also leads to recovery of phloem development and function in lrd3, which demonstrates that auxin plays a key role in early phloem development. The root system architecture and the pattern of phloem allocation in the lrd3 root system suggested that there may be regulated mechanisms for selectively supporting certain lateral roots when the primary root is compromised. Therefore, this study provides new insights into phloem-mediated resource allocation and its effects on plant root system architecture.
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Affiliation(s)
- Paul Ingram
- Department of Molecular Genetics and Cell Biology, The University of Chicago, 5812 S. Ellis Street, Chicago, IL 60637, USA
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50
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van Bel AJE, Furch ACU, Hafke JB, Knoblauch M, Patrick JW. (Questions)n on phloem biology. 2. Mass flow, molecular hopping, distribution patterns and macromolecular signalling. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2011; 181:325-330. [PMID: 21889037 DOI: 10.1016/j.plantsci.2011.05.008] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/05/2011] [Accepted: 05/16/2011] [Indexed: 05/31/2023]
Abstract
This review speculates on correlations between mass flow in sieve tubes and the distribution of photoassimilates and macromolecular signals. Since micro- (low-molecular compounds) and macromolecules are withdrawn from, and released into, the sieve-tube sap at various rates, distribution patterns of these compounds do not strictly obey mass-flow predictions. Due to serial release and retrieval transport steps executed by sieve tube plasma membranes, micromolecules are proposed to "hop" between sieve element/companion cell complexes and phloem parenchyma cells under source-limiting conditions (apoplasmic hopping). Under sink-limiting conditions, micromolecules escape from sieve tubes via pore-plasmodesma units and are temporarily stored. It is speculated that macromolecules "hop" between sieve elements and companion cells using plasmodesmal trafficking mechanisms (symplasmic hopping). We explore how differential tagging may influence distribution patterns of macromolecules and how their bidirectional movement could arise. Effects of exudation techniques on the macromolecular composition of sieve-tube sap are discussed.
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Affiliation(s)
- Aart J E van Bel
- Plant Cell Biology Research Group, Institute of General Botany, Justus Liebig University, Senckenbergstrasse 17, Giessen, Germany.
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