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Ordonez A, Gill JL. Unravelling the functional and phylogenetic dimensions of novel ecosystem assemblages. Philos Trans R Soc Lond B Biol Sci 2024; 379:20230324. [PMID: 38583470 PMCID: PMC10999274 DOI: 10.1098/rstb.2023.0324] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/16/2023] [Accepted: 12/19/2023] [Indexed: 04/09/2024] Open
Abstract
Human activities are causing taxonomic rearrangements across ecosystems that often result in the emergence of novel communities (assemblies with no historical representative). It is commonly assumed that these changes in the taxonomic makeup of ecosystems also inevitably lead to changes in other aspects of biodiversity, namely functional and phylogenetic diversity. However, this assumption is not always valid, as the changes in functional and phylogenetic composition resulting from taxonomic shifts depend on the level of redundancy in the evaluated community. Therefore, we need improved theoretical frameworks to predict when we can expect coordinated or decoupled responses among these three facets of biodiversity. To advance this understanding, we discuss the conceptual and methodological issues that complicate establishing a link between taxonomic rearrangements driven by human activities and the associated functional and phylogenetic changes. Here, we show that is crucial to consider the expected changes in functional and phylogenetic composition as communities are reshaped owing to human drivers of biodiversity loss to forecast the impacts of novel assemblages on ecosystem functions and the services they provide to humanity. This article is part of the theme issue 'Ecological novelty and planetary stewardship: biodiversity dynamics in a transforming biosphere'.
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Affiliation(s)
- Alejandro Ordonez
- Section for Ecoinformatics and Biodiversity, Department of Bioscience, Aarhus University, Ny Munkegade 114, 8000 Aarhus C, Denmark
- Center for Biodiversity Dynamics in a Changing World (BIOCHANGE), Department of Bioscience, Aarhus University, Ny Munkegade 114, 8000 Aarhus C, Denmark
| | - Jacquelyn L. Gill
- School of Biology and Ecology, University of Maine, 5751 Murray Hall, Room 100 Orono, ME 04469, USA
- Climate Change Institute, University of Maine, 5751 Murray Hall, Room 100 Orono, ME 04469, USA
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Peraza-Escarrá R, Armenteros M, Fernández-Garcés R, Gracia A. Taxonomic, phylogenetic, and functional diversity of mollusk death assemblages in coral reef and seagrass sediments from two shallow gulfs in Western Cuban Archipelago. PLoS One 2024; 19:e0303539. [PMID: 38743730 PMCID: PMC11093297 DOI: 10.1371/journal.pone.0303539] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/15/2023] [Accepted: 04/25/2024] [Indexed: 05/16/2024] Open
Abstract
Mollusk death assemblages are formed by shell remnants deposited in the surficial mixed layer of the seabed. Diversity patterns in tropical marine habitats still are understudied; therefore, we aimed to investigate the taxonomic, phylogenetic, and functional diversity of mollusk death assemblages at regional and local scales in coral reef sands and seagrass meadows. We collected sediment samples at 11 sites within two shallow gulfs in the Northwestern Caribbean Sea and Southeastern Gulf of Mexico. All the shells were counted and identified to species level and classified into biological traits. We identified 7113 individuals belonging to 393 species (290 gastropods, 94 bivalves, and nine scaphopods). Diversity and assemblage structure showed many similarities between gulfs given their geological and biogeographical commonalities. Reef sands had higher richness than seagrasses likely because of a more favorable balance productivity-disturbance. Reef sands were dominated by epifaunal herbivores likely feeding on microphytobenthos and bysally attached bivalves adapted to intense hydrodynamic regime. In seagrass meadows, suspension feeders dominated in exposed sites and chemosynthetic infaunal bivalves dominated where oxygen replenishment was limited. Time averaging of death assemblages was likely in the order of 100 years, with stronger effects in reef sands compared to seagrass meadows. Our research provides evidence of the high taxonomic, phylogenetic, and functional diversity of mollusk death assemblages in tropical coastal sediments as result of the influence of scale-related processes and habitat type. Our study highlights the convenience of including phylogenetic and functional traits, as well as dead shells, for a more complete assessment of mollusk biodiversity.
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Affiliation(s)
- Rosely Peraza-Escarrá
- Posgrado en Ciencias del Mar y Limnología, Universidad Nacional Autónoma de México, Ciudad de México, México
- Instituto de Ciencias del Mar y Limnología, Universidad Nacional Autónoma de México, Ciudad de México, México
| | - Maickel Armenteros
- Instituto de Ciencias del Mar y Limnología, Universidad Nacional Autónoma de México, Ciudad de México, México
| | | | - Adolfo Gracia
- Instituto de Ciencias del Mar y Limnología, Universidad Nacional Autónoma de México, Ciudad de México, México
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Zhang Y, Datry T, Zhang Q, Wang X, Xiang X, Gong Z, Cai Y. Effects of different hydrological conditions on the taxonomic structure and functional traits of mollusk communities in a large floodplain wetland. Ecol Evol 2024; 14:e11466. [PMID: 38803609 PMCID: PMC11128460 DOI: 10.1002/ece3.11466] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/30/2023] [Revised: 03/13/2024] [Accepted: 05/07/2024] [Indexed: 05/29/2024] Open
Abstract
Floodplain wetlands are critical to the conservation of aquatic biodiversity and the ecological integrity of river networks. However, increasing drought severity and frequency caused by climate change can reduce floodplain wetlands' resistance and recovery capacities. Mollusks, which are common inhabitants of floodplain wetlands, are among the most vulnerable species to drought. However, the response of mollusk communities to drought has received little attention. Here, we investigated how the structure and functional traits of mollusk communities changed in response to varying hydrological conditions, including a flash drought (FD) in the Poyang Lake floodplain wetland. Our findings showed that FD strongly reduced mollusk abundance and biomass, decreased both α- and β-diversity, and resulted in the extinction of bivalve taxa. A sudden shift in community trait structure was discovered due to the extinction of many species. These traits, which include deposit feeding, crawling, scraping, aerial respiration, and dormancy, help mollusks survive in FD and tolerate completely dry out of their Changhuchi habitat. Finally, we discovered that dissolved oxygen was an important controlling variable for mollusk communities during drought. Our findings provide a scientific basis for the management and conservation of floodplain wetland biodiversity in the context of increasing drought frequency and intensity.
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Affiliation(s)
- Yao Zhang
- Key Laboratory of Lake and Watershed Science for Water Security, Nanjing Institute of Geography and LimnologyChinese Academy of SciencesNanjingChina
- School of Ecology and EnvironmentAnhui Normal UniversityWuhuChina
- Collaborative Innovation Center of Recovery and Reconstruction of Degraded Ecosystem in Wanjiang Basin Co‐Founded by Anhui Province and Ministry of EducationWuhuChina
- Poyang Lake Wetland Research Station, Nanjing Institute of Geography and Limnology, Chinese Academy of SciencesJiujiangChina
| | - Thibault Datry
- INRAE, UR RiverLy, Centre de Lyon‐VilleurbanneVilleurbanne CedexFrance
| | - Qingji Zhang
- Key Laboratory of Lake and Watershed Science for Water Security, Nanjing Institute of Geography and LimnologyChinese Academy of SciencesNanjingChina
- INRAE, UR RiverLy, Centre de Lyon‐VilleurbanneVilleurbanne CedexFrance
- School of Geography and Ocean ScienceNanjing UniversityNanjingChina
| | - Xiaolong Wang
- Key Laboratory of Lake and Watershed Science for Water Security, Nanjing Institute of Geography and LimnologyChinese Academy of SciencesNanjingChina
- Poyang Lake Wetland Research Station, Nanjing Institute of Geography and Limnology, Chinese Academy of SciencesJiujiangChina
| | - Xianling Xiang
- School of Ecology and EnvironmentAnhui Normal UniversityWuhuChina
- Collaborative Innovation Center of Recovery and Reconstruction of Degraded Ecosystem in Wanjiang Basin Co‐Founded by Anhui Province and Ministry of EducationWuhuChina
| | - Zhijun Gong
- Key Laboratory of Lake and Watershed Science for Water Security, Nanjing Institute of Geography and LimnologyChinese Academy of SciencesNanjingChina
- Collaborative Innovation Center of Recovery and Reconstruction of Degraded Ecosystem in Wanjiang Basin Co‐Founded by Anhui Province and Ministry of EducationWuhuChina
| | - Yongjiu Cai
- Key Laboratory of Lake and Watershed Science for Water Security, Nanjing Institute of Geography and LimnologyChinese Academy of SciencesNanjingChina
- Collaborative Innovation Center of Recovery and Reconstruction of Degraded Ecosystem in Wanjiang Basin Co‐Founded by Anhui Province and Ministry of EducationWuhuChina
- Poyang Lake Wetland Research Station, Nanjing Institute of Geography and Limnology, Chinese Academy of SciencesJiujiangChina
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Krasnov BR, Khokhlova IS, López Berrizbeitia MF, Matthee S, Sanchez JP, Shenbrot GI, van der Mescht L. Relationships between functional alpha and beta diversities of flea parasites and their small mammalian hosts. Parasitology 2024; 151:449-460. [PMID: 38433581 PMCID: PMC11043902 DOI: 10.1017/s0031182024000283] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/04/2023] [Revised: 02/08/2024] [Accepted: 02/28/2024] [Indexed: 03/05/2024]
Abstract
We studied the relationships between functional alpha and beta diversities of fleas and their small mammalian hosts in 4 biogeographic realms (the Afrotropics, the Nearctic, the Neotropics and the Palearctic), considering 3 components of alpha diversity (functional richness, divergence and regularity). We asked whether (a) flea alpha and beta diversities are driven by host alpha and beta diversities; (b) the variation in the off-host environment affects variation in flea alpha and beta diversities; and (c) the pattern of the relationship between flea and host alpha or beta diversities differs between geographic realms. We analysed alpha diversity using modified phylogenetic generalized least squares and beta diversity using modified phylogenetic generalized dissimilarity modelling. In all realms, flea functional richness and regularity increased with an increase in host functional richness and regularity, respectively, whereas flea functional divergence correlated positively with host functional divergence in the Nearctic only. Environmental effects on the components of flea alpha diversity were found only in the Holarctic realms. Host functional beta diversity was invariantly the best predictor of flea functional beta diversity in all realms, whereas the effects of environmental variables on flea functional beta diversity were much weaker and differed between realms. We conclude that flea functional diversity is mostly driven by host functional diversity, whereas the environmental effects on flea functional diversity vary (a) geographically and (b) between components of functional alpha diversity.
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Affiliation(s)
- Boris R. Krasnov
- Mitrani Department of Desert Ecology, Swiss Institute for Dryland Environmental and Energy Research, Jacob Blaustein Institutes for Desert Research, Ben-Gurion University of the Negev, Sede Boqer Campus, 8499000 Midreshet Ben-Gurion, Israel
| | - Irina S. Khokhlova
- French Associates Institute for Agriculture and Biotechnology of Drylands, Jacob Blaustein Institutes for Desert Research, Ben-Gurion University of the Negev, Sede Boqer Campus, 8499000 Midreshet Ben-Gurion, Israel
| | - M. Fernanda López Berrizbeitia
- Programa de Conservación de los Murciélagos de Argentina (PCMA) and Instituto de Investigaciones de Biodiversidad Argentina (PIDBA)-CCT CONICET Noa Sur (Consejo Nacional de Investigaciones Científicas y Técnicas), Facultad de Ciencias Naturales e IML, UNT, and Fundación Miguel Lillo, Miguel Lillo 251, 4000 San Miguel de Tucumán, Argentina
| | - Sonja Matthee
- Stellenbosch University, Private Bag X1, Matieland 7602, South Africa
| | - Juliana P. Sanchez
- Centro de Investigaciones y Transferencia del Noroeste de la Provincia de Buenos Aires – CITNOBA (CONICET-UNNOBA), Ruta Provincial 32 Km 3.5, 2700 Pergamino, Argentina
| | - Georgy I. Shenbrot
- Mitrani Department of Desert Ecology, Swiss Institute for Dryland Environmental and Energy Research, Jacob Blaustein Institutes for Desert Research, Ben-Gurion University of the Negev, Sede Boqer Campus, 8499000 Midreshet Ben-Gurion, Israel
| | - Luther van der Mescht
- Clinvet International (Pty) Ltd, Universitas, Uitsig Road, Bloemfontein 9338, South Africa
- Department of Zoology and Entomology, University of the Free State, 205 Nelson Mandela Dr, Park West, Bloemfontein 9301, South Africa
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Guo T, Wei Y, Wei B, Guo M, Zheng S, Zhang Y, Liu N. Defoliation, trampling and nutrient return differentially influence grassland productivity by modulating trait-dependent plant community composition: insights from a simulated grazing experiment. Oecologia 2024; 204:885-898. [PMID: 38643441 DOI: 10.1007/s00442-024-05550-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/07/2023] [Accepted: 04/08/2024] [Indexed: 04/22/2024]
Abstract
Ungulate grazing involves multiple components, including defoliation, dung and urine return, and trampling, which supply offsetting or synergistic effects on plant community composition and productivity (ANPP), but these effects have not been fully studied. Plant functional traits may reflect the response of plants to disturbance and their impact on ecosystem functions. Species turnover and intraspecific trait variation (ITV) are important drivers of community trait composition. We conducted a simulated grazing experiment in a steppe grassland in northern China to examine the effects of defoliation, dung and urine return, and trampling on community-weighted mean (CWM), functional diversity (FD) and ANPP, and to disentangle the roles of species turnover and ITV in driving these changes. We found that defoliation had a dominant effect on CWMs and FDs of all four traits through species turnover and ITV, respectively, resulting in a convergence of traits towards as more resource-acquisitive strategy. Dung-urine return resulted in more resource-acquisitive community traits mainly through ITV, whereas there were no significant effects on FDs except for leaf C/N. Trampling increased CWM of leaf dry matter content primarily driven by ITV, and had no significant effect on FDs. Furthermore, our simulated grazing positively affected ANPP, primarily due to nutrient additions from dung and urine, and ITV largely explained the variation in ANPP. These findings highlight the multifaceted effects of grazing components on community structure and ANPP, and the significance of ITV in shaping grassland plant communities and productivity.
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Affiliation(s)
- Tongtian Guo
- College of Grassland Science and Technology, China Agricultural University, Beijing, 100193, China
- Key Laboratory of Grassland Management and Rational Utilization, Ministry of Agriculture and Rural Affairs, Beijing, 100193, China
| | - Yuqi Wei
- College of Grassland Science and Technology, China Agricultural University, Beijing, 100193, China
- Key Laboratory of Grassland Management and Rational Utilization, Ministry of Agriculture and Rural Affairs, Beijing, 100193, China
- Shanxi Key Laboratory for Ecological Restoration of Loess Plateau China, Observation and Research Station of the Ministry of Education of Shanxi Subalpine Grassland Ecosystem, Institute of Loess Plateau, Shanxi University, Taiyuan, 030006, China
| | - Bin Wei
- College of Grassland Science and Technology, China Agricultural University, Beijing, 100193, China
- Key Laboratory of Grassland Management and Rational Utilization, Ministry of Agriculture and Rural Affairs, Beijing, 100193, China
| | - Meiqi Guo
- College of Grassland Science and Technology, China Agricultural University, Beijing, 100193, China
- Key Laboratory of Grassland Management and Rational Utilization, Ministry of Agriculture and Rural Affairs, Beijing, 100193, China
| | - Shuxia Zheng
- State Key Laboratory of Vegetation and Environmental Change, Institute of Botany, Chinese Academy of Sciences, Beijing, 100093, China
| | - Yingjun Zhang
- College of Grassland Science and Technology, China Agricultural University, Beijing, 100193, China.
- Key Laboratory of Grassland Management and Rational Utilization, Ministry of Agriculture and Rural Affairs, Beijing, 100193, China.
| | - Nan Liu
- College of Grassland Science and Technology, China Agricultural University, Beijing, 100193, China.
- Key Laboratory of Grassland Management and Rational Utilization, Ministry of Agriculture and Rural Affairs, Beijing, 100193, China.
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Song S, Xiong K, Chi Y. Response of grassland ecosystem function to plant functional traits under different vegetation restoration models in areas of karst desertification. FRONTIERS IN PLANT SCIENCE 2023; 14:1239190. [PMID: 38148857 PMCID: PMC10749941 DOI: 10.3389/fpls.2023.1239190] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/13/2023] [Accepted: 11/20/2023] [Indexed: 12/28/2023]
Abstract
Plant functional traits serve as a bridge between plants, the environment, and ecosystem function, playing an important role in predicting the changes in ecosystem function that occur during ecological restoration. However, the response of grassland ecosystem function to plant functional traits in the context of ecological restoration in areas of karst desertification remains unclear. Therefore, in this study, we selected five plant functional traits [namely, plant height (H), specific leaf area (SLA), leaf dry matter content (LDMC), root length (RL), and root dry matter content (RDMC)], measured these along with community-weighted mean (CWM) and functional trait diversity, and combined these measures with 10 indexes related to ecosystem function in order to investigate the differences in plant functional traits and ecosystem function, as well as the relationship between plant functional traits and ecosystem functions, under four ecological restoration models [Dactylis glomerata (DG), Lolium perenne (LP), Lolium perenne + Trifolium repens (LT), and natural grassland (NG)]. We found that: 1) the Margalef index and Shannon-Wiener index were significantly lower for plant species in DG and LP than for those in NG (P<0.05), while the Simpson index was significantly higher in the former than in NG (P<0.05); 2) CWMH, CWMLDMC, and CWMRDMC were significantly higher in DG, LP, and LT than in NG, while CWMSLA was significantly lower in the former than in NG (P<0.05). The functional richness index (FRic) was significantly higher in DG and LP than in NG and LT, but the functional dispersion index (FDis) and Rao's quadratic entropy index (RaoQ) were significantly lower in DG and LP than in NG and LT (P<0.05), and there was no significant difference between DG and LP, or between NG and LT (P>0.05); 3) ecosystem function, including ecosystem productivity, carbon storage, water conservation and soil conservation, was highest in LT and lowest in NG; and 4) CWMLDMC (F=56.7, P=0.024), CWMRL (F=28.7, P=0.024), and CWMH (F=4.5, P=0.048) were the main factors affecting ecosystem function. The results showed that the mixed pasture of perennial ryegrass and white clover was most conductive to restoration of ecosystem function. This discovery has important implications for the establishment of vegetation, optimal utilization of resources, and the sustainable development of degraded karst ecosystems.
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Affiliation(s)
- Shuzhen Song
- School of Karst Science, Guizhou Normal University, Guiyang, China
| | - Kangning Xiong
- State Engineering Technology Institute for Karst Desertification Control, Guizhou Normal University, Guiyang, China
| | - Yongkuan Chi
- School of Karst Science, Guizhou Normal University, Guiyang, China
- State Engineering Technology Institute for Karst Desertification Control, Guizhou Normal University, Guiyang, China
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Oliveira FR, Lansac-Tôha FM, Meira BR, Progênio M, Velho LFM. Influence of Ecological Multiparameters on Facets of β-Diversity of Freshwater Plankton Ciliates. MICROBIAL ECOLOGY 2023; 87:10. [PMID: 38057381 DOI: 10.1007/s00248-023-02312-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/05/2023] [Accepted: 10/15/2023] [Indexed: 12/08/2023]
Abstract
Understanding the relative importance of the factors that drive global patterns of biodiversity is among the major topics of ecological and biogeographic research. In freshwater bodies, spatial, temporal, abiotic, and biotic factors are important structurers of these ecosystems and can trigger distinct responses according to the facet of biodiversity considered. The objective was to evaluate how different facets of β-diversity (taxonomic, functional, and phylogenetic) based on data from the planktonic ciliate community of a Neotropical floodplain, are influenced by temporal, spatial, abiotic, and biotic factors. The research was conducted in the upper Paraná River floodplain between the years 2010 and 2020 in different water bodies. All predictors showed significant importance on the facets of β-diversity, except the abiotic predictors on species composition data, for the taxonomic facet. The functional and phylogenetic facets were mostly influenced by abiotic, biotic, and spatial factors. For temporal predictors, results showed influence on taxonomic (structure and composition data) and functional (structure data) facets. Also, a fraction of shared explanation between the temporal and abiotic components was observed for the distinct facets. Significant declines in β-diversity in continental ecosystems have been evidenced, especially those with drastic implications for ecosystemic services. Therefore, the preservation of a high level of diversity in water bodies, also involving phylogenetic and functional facets, should be a priority in conservation plans and goals, to ensure the maintenance of important ecological processes involving ciliates.
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Affiliation(s)
- Felipe Rafael Oliveira
- Programa de Pós-Graduação em Ecologia de Ambientes Aquáticos Continentais (PEA), Departamento de Biologia (DBI), Centro de Ciências Biológicas (CCB), Núcleo de Pesquisas em Limnologia, Ictiologia e Aquicultura (Nupelia), Universidade Estadual de Maringá - UEM, Maringá, PR, 87020-900, Brazil.
- Faculdade de Ciências Agrárias e Biológicas (FACAB), Curso de Ciências Biológicas, Universidade do Estado do Mato Grosso - UNEMAT, 78.200-000, Cáceres, MT, Brazil.
| | - Fernando Miranda Lansac-Tôha
- Programa de Pós-Graduação em Ecologia de Ambientes Aquáticos Continentais (PEA), Departamento de Biologia (DBI), Centro de Ciências Biológicas (CCB), Núcleo de Pesquisas em Limnologia, Ictiologia e Aquicultura (Nupelia), Universidade Estadual de Maringá - UEM, Maringá, PR, 87020-900, Brazil
| | - Bianca Ramos Meira
- Instituto de Ciências Exatas e Biológicas, Departamento de Biodiversidade, Evolução e Meio Ambiente, Universidade Federal de Ouro Preto - UFPO, Ouro Preto, MG, 35400-000, Brazil
| | - Melissa Progênio
- Programa de Pós-Graduação em Ecologia de Ambientes Aquáticos Continentais (PEA), Departamento de Biologia (DBI), Centro de Ciências Biológicas (CCB), Núcleo de Pesquisas em Limnologia, Ictiologia e Aquicultura (Nupelia), Universidade Estadual de Maringá - UEM, Maringá, PR, 87020-900, Brazil
| | - Luiz Felipe Machado Velho
- Programa de Pós-Graduação em Ecologia de Ambientes Aquáticos Continentais (PEA), Departamento de Biologia (DBI), Centro de Ciências Biológicas (CCB), Núcleo de Pesquisas em Limnologia, Ictiologia e Aquicultura (Nupelia), Universidade Estadual de Maringá - UEM, Maringá, PR, 87020-900, Brazil
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Martínez-Núñez C, Martínez-Prentice R, García-Navas V. Protected area coverage of vulnerable regions to conserve functional diversity of birds. CONSERVATION BIOLOGY : THE JOURNAL OF THE SOCIETY FOR CONSERVATION BIOLOGY 2023; 37:e14131. [PMID: 37259609 DOI: 10.1111/cobi.14131] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/13/2023] [Revised: 05/21/2023] [Accepted: 05/23/2023] [Indexed: 06/02/2023]
Abstract
Global-change drivers are increasing the rates of species extinction worldwide, posing a serious threat to ecosystem functioning. Preserving the functional diversity of species is currently a priority to mitigate abrupt biodiversity loss in the coming decades. Therefore, understanding what factors better predict functional diversity loss in bird assemblages at a global scale and how existing protected areas cover the most vulnerable regions is of key importance for conservation. We examined the environmental factors associated with the risk of functional diversity loss under 3 scenarios of bird species extinction based on species distribution range size, generation length, and International Union for the Conservation of Nature conservation status. Then, we identified regions that deserve special conservation focus. We also assessed how efficiently extant terrestrial protected areas preserve particularly vulnerable bird assemblages based on predicted scenarios of extinction risk. The vulnerability of bird functional diversity increased as net primary productivity, land-use diversity, mean annual temperature, and elevation decreased. Low values for these environmental factors were associated with a higher risk of functional diversity loss worldwide through two mechanisms: one independent of species richness that affects assemblages with low levels of niche packing and high functional dissimilarity among species, and the other that affects assemblages with low species richness and high rates of extinction. Existing protected areas ineffectively safeguarded regions with a high risk of losing functional diversity in the next decades. The global predictors and the underlying mechanisms of functional vulnerability in bird assemblages we identified can inform strategies aimed at preserving bird-driven ecological functions worldwide.
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Affiliation(s)
- Carlos Martínez-Núñez
- Department of Integrative Ecology, Estación Biológica de Doñana EBD (CSIC), Seville, Spain
| | - Ricardo Martínez-Prentice
- Institute of Agriculture and Environmental Sciences, Estonian University of Life Sciences, Tartu, Estonia
| | - Vicente García-Navas
- Department of Integrative Ecology, Estación Biológica de Doñana EBD (CSIC), Seville, Spain
- Department of Evolutionary Biology and Environmental Studies, University of Zurich, Zurich, Switzerland
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Adhurya S, Lee DY, Lee DS, Park YS. Functional trait dataset of benthic macroinvertebrates in South Korean streams. Sci Data 2023; 10:838. [PMID: 38017016 PMCID: PMC10684509 DOI: 10.1038/s41597-023-02678-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/23/2023] [Accepted: 10/23/2023] [Indexed: 11/30/2023] Open
Abstract
Functional traits are the result of evolution and adaptation, providing important ecological insights into how organisms interact with their environment. Benthic macroinvertebrates, in particular, have garnered attention as biomonitoring indicators for freshwater ecosystems. This study presents a functional trait dataset for benthic macroinvertebrates, comprising 447 taxa (393 at genus level, 53 at family level and one at class level) from five phyla (Annelida, Arthropoda, Mollusca, Nematomorpha, and Platyhelmenthes), categorized into nine traits related to life history, morphology, and habit. To account for variation in available trait information, we assigned confidence levels to each taxon and functional trait based on the level of evidence using fuzzy coding. Our dataset provides an important resource for understanding the ecology of benthic macroinvertebrates in South Korea, serving as a valuable baseline dataset for studying their biodiversity, conservation, and biomonitoring in freshwater ecosystems.
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Affiliation(s)
- Sagar Adhurya
- Ecology and Ecological Informatics Laboratory, Department of Biology, College of Science, Kyung Hee University, Seoul, 02447, Republic of Korea
| | - Da-Yeong Lee
- Ecology and Ecological Informatics Laboratory, Department of Biology, College of Science, Kyung Hee University, Seoul, 02447, Republic of Korea
| | - Dae-Seong Lee
- Ecology and Ecological Informatics Laboratory, Department of Biology, College of Science, Kyung Hee University, Seoul, 02447, Republic of Korea
| | - Young-Seuk Park
- Ecology and Ecological Informatics Laboratory, Department of Biology, College of Science, Kyung Hee University, Seoul, 02447, Republic of Korea.
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Painter DR, Norwood MF, Marsh CH, Hine T, Harvie D, Libera M, Bernhardt J, Gan L, Zeeman H. Immersive virtual reality gameplay detects visuospatial atypicality, including unilateral spatial neglect, following brain injury: a pilot study. J Neuroeng Rehabil 2023; 20:161. [PMID: 37996834 PMCID: PMC10668447 DOI: 10.1186/s12984-023-01283-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/26/2023] [Accepted: 11/12/2023] [Indexed: 11/25/2023] Open
Abstract
BACKGROUND In neurorehabilitation, problems with visuospatial attention, including unilateral spatial neglect, are prevalent and routinely assessed by pen-and-paper tests, which are limited in accuracy and sensitivity. Immersive virtual reality (VR), which motivates a much wider (more intuitive) spatial behaviour, promises new futures for identifying visuospatial atypicality in multiple measures, which reflects cognitive and motor diversity across individuals with brain injuries. METHODS In this pilot study, we had 9 clinician controls (mean age 43 years; 4 males) and 13 neurorehabilitation inpatients (mean age 59 years; 9 males) recruited a mean of 41 days post-injury play a VR visual search game. Primary injuries included 7 stroke, 4 traumatic brain injury, 2 other acquired brain injury. Three patients were identified as having left sided neglect prior to taking part in the VR. Response accuracy, reaction time, and headset and controller raycast orientation quantified gameplay. Normative modelling identified the typical gameplay bounds, and visuospatial atypicality was defined as gameplay beyond these bounds. RESULTS The study found VR to be feasible, with only minor instances of motion sickness, positive user experiences, and satisfactory system usability. Crucially, the analytical method, which emphasized identifying 'visuospatial atypicality,' proved effective. Visuospatial atypicality was more commonly observed in patients compared to controls and was prevalent in both groups of patients-those with and without neglect. CONCLUSION Our research indicates that normative modelling of VR gameplay is a promising tool for identifying visuospatial atypicality after acute brain injury. This approach holds potential for a detailed examination of neglect.
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Affiliation(s)
- David R Painter
- The Hopkins Centre, Menzies Health Institute Queensland, Griffith University, 170 Kessels Rd, Nathan, QLD, 4111, Australia
| | - Michael F Norwood
- The Hopkins Centre, Menzies Health Institute Queensland, Griffith University, 170 Kessels Rd, Nathan, QLD, 4111, Australia.
| | - Chelsea H Marsh
- The Hopkins Centre, Menzies Health Institute Queensland, Griffith University, 170 Kessels Rd, Nathan, QLD, 4111, Australia
- School of Applied Psychology, Griffith University, Gold Coast, QLD, Australia
| | - Trevor Hine
- The Hopkins Centre, Menzies Health Institute Queensland, Griffith University, 170 Kessels Rd, Nathan, QLD, 4111, Australia
- School of Applied Psychology, Griffith University, Mount Gravatt, QLD, Australia
| | - Daniel Harvie
- The Hopkins Centre, Menzies Health Institute Queensland, Griffith University, 170 Kessels Rd, Nathan, QLD, 4111, Australia
- Allied Health and Human Performance, Innovation, Implementation and Clinical Translation in Health (IIMPACT in Health), University South Australia, Adelaide, SA, Australia
| | - Marilia Libera
- Psychology Department, Logan Hospital, Logan, QLD, Australia
| | - Julie Bernhardt
- Florey Institute of Neuroscience and Mental Health, Heidelberg, VIC, Australia
| | - Leslie Gan
- Rehabilitation Unit, Logan Hospital, Meadowbrook, QLD, Australia
| | - Heidi Zeeman
- The Hopkins Centre, Menzies Health Institute Queensland, Griffith University, 170 Kessels Rd, Nathan, QLD, 4111, Australia
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11
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Ribeiro AT, Teodoro GS, da Silva KC, Pereira-Matos YC, Batista BL, Lobato AKS. 24-Epibrassinolide alleviates drought effects in young Carapa guianensis plants, improving the hydraulic safety margin, gas exchange and antioxidant defence. PLANT BIOLOGY (STUTTGART, GERMANY) 2023; 25:924-934. [PMID: 37549227 DOI: 10.1111/plb.13563] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/26/2023] [Accepted: 07/12/2023] [Indexed: 08/09/2023]
Abstract
Climate change is increasing the frequency of extreme events such as droughts, limiting plant growth and productivity. Exogenous application of plant growth regulators, such as 24-epibrassinolide (EBR), might be a solution as this molecule is organic, eco-friendly, and biodegradable. This is the first research to examine possible roles of EBR on the hydraulic safety margin, physiological behaviour, and metabolism in Carapa guianensis Aubl. (Meliaceae) exposed to drought. C. guianensis is a widely distributed tree in tropical forests of the Amazon. The objective was to determine whether EBR can improve tolerance to water deficit in young C. guianensis by measuring hydraulic traits, nutritional, biochemical and physiological responses, and biomass. The experiment had four randomized treatments: two water conditions (control and water deficit) and two concentrations of EBR (0 and 100 nM EBR). EBR increased the water potential and hydraulic safety margin, increased CO2 fixation, and improved stomatal performance. EBR also stimulated antioxidant defences (SOD, CAT, APX, and POX). Overall, tretreatment with EBR improved drought tolerance of young C. guianensis plants.
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Affiliation(s)
- A T Ribeiro
- Programa de Pós-Graduação em Botânica, Coordenação de Botânica, Museu Paraense Emílio Goeldi, Belém, Pará, Brazil
| | - G S Teodoro
- Instituto de Ciências Biológicas, Universidade Federal do Pará, Belém, Pará, Brazil
| | - K C da Silva
- Programa de Pós-Graduação em Botânica, Coordenação de Botânica, Museu Paraense Emílio Goeldi, Belém, Pará, Brazil
| | - Y C Pereira-Matos
- Núcleo de Pesquisa Vegetal Básica e Aplicada, Universidade Federal Rural da Amazônia, Paragominas, Pará, Brazil
| | - B L Batista
- Centro de Ciências Naturais e Humanas, Universidade Federal do ABC, Santo André, São Paulo, Brazil
| | - A K S Lobato
- Núcleo de Pesquisa Vegetal Básica e Aplicada, Universidade Federal Rural da Amazônia, Paragominas, Pará, Brazil
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12
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Schmera D, Ricotta C, Podani J. Components of functional diversity revisited: A new classification and its theoretical and practical implications. Ecol Evol 2023; 13:e10614. [PMID: 37841225 PMCID: PMC10570903 DOI: 10.1002/ece3.10614] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/06/2023] [Revised: 09/06/2023] [Accepted: 09/29/2023] [Indexed: 10/17/2023] Open
Abstract
Functional diversity is regarded as a key concept for understanding the link between ecosystem function and biodiversity. The different and ecologically well-defined aspects of the concept are reflected by the so-called functional components, for example, functional richness and divergence. Many authors proposed that components be distinguished according to the multivariate technique on which they rely, but more recent studies suggest that several multivariate techniques, providing different functional representations (such as dendrograms and ordinations) of the community can in fact express the same functional component. Here, we review the relevant literature and find that (1) general ecological acceptance of the field is hampered by ambiguous terminology and (2) our understanding of the role of multivariate techniques in defining components is unclear. To address these issues, we provide new definitions for the three basic functional diversity components namely functional richness, functional divergence and functional regularity. In addition, we present a classification of presence-/absence-based approaches suitable for quantifying these components. We focus exclusively on the binary case for its relative simplicity. We find illogical, as well as logical but unused combinations of components and representations; and reveal that components can be quantified almost independently from the functional representation of the community. Finally, theoretical and practical implications of the new classification are discussed.
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Affiliation(s)
- Dénes Schmera
- Balaton Limnological Research InstituteTihanyHungary
- National Laboratory for Water Science and Water SecurityBalaton Limnological Research InstituteTihanyHungary
| | - Carlo Ricotta
- Department of Environmental BiologyUniversity of Rome ‘La Sapienza’RomeItaly
| | - János Podani
- Department of Plant Systematics, Ecology and Theoretical Biology, Institute of BiologyEötvös UniversityBudapestHungary
- Institute of Evolution, Centre for Ecological ResearchBudapestHungary
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13
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Lazarina M, Michailidou DE, Tsianou M, Kallimanis AS. How Biodiversity, Climate and Landscape Drive Functional Redundancy of British Butterflies. INSECTS 2023; 14:722. [PMID: 37754690 PMCID: PMC10531656 DOI: 10.3390/insects14090722] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/30/2023] [Revised: 08/16/2023] [Accepted: 08/21/2023] [Indexed: 09/28/2023]
Abstract
Biodiversity promotes the functioning of ecosystems, and functional redundancy safeguards this functioning against environmental changes. However, what drives functional redundancy remains unclear. We analyzed taxonomic diversity, functional diversity (richness and β-diversity) and functional redundancy patterns of British butterflies. We explored the effect of temperature and landscape-related variables on richness and redundancy using generalized additive models, and on β-diversity using generalized dissimilarity models. The species richness-functional richness relationship was saturating, indicating functional redundancy in species-rich communities. Assemblages did not deviate from random expectations regarding functional richness. Temperature exerted a significant effect on all diversity aspects and on redundancy, with the latter relationship being unimodal. Landscape-related variables played a role in driving observed patterns. Although taxonomic and functional β-diversity were highly congruent, the model of taxonomic β-diversity explained more deviance than the model of functional β-diversity did. Species-rich butterfly assemblages exhibited functional redundancy. Climate- and landscape-related variables emerged as significant drivers of diversity and redundancy. Τaxonomic β-diversity was more strongly associated with the environmental gradient, while functional β-diversity was driven more strongly by stochasticity. Temperature promoted species richness and β-diversity, but warmer areas exhibited lower levels of functional redundancy. This might be related to the land uses prevailing in warmer areas (e.g., agricultural intensification).
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Affiliation(s)
- Maria Lazarina
- Department of Ecology, Aristotle University of Thessaloniki, 54124 Thessaloniki, Greece; (D.-E.M.); (A.S.K.)
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14
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Arbieu U, Albrecht J, Böhning-Gaese K, Lehnen L, Schleuning M, Mueller T. The attitudinal space framework: Embracing the multidimensionality of attitudinal diversity. iScience 2023; 26:107340. [PMID: 37539036 PMCID: PMC10393727 DOI: 10.1016/j.isci.2023.107340] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/17/2023] [Revised: 06/09/2023] [Accepted: 07/06/2023] [Indexed: 08/05/2023] Open
Abstract
Attitude polarization describes an increasing attitude difference between groups and is increasingly recognized as a multidimensional phenomenon. However, a unified framework to study polarization across multiple dimensions is lacking. We introduce the attitudinal space framework (ASF) to fully quantify attitudinal diversity. We highlight two key measures-attitudinal extremization and attitudinal dispersion-to quantify across- and within-group attitudinal patterns. First, we show that affective polarization in the US electorate is weaker than previously thought based on mean differences alone: in both Democrat and Republican partisans, attitudinal dispersion increased between 1988 and 2008. Second, we examined attitudes toward wolves in Germany. Despite attitude differences between regions with and without wolves, we did not find differences in attitudinal extremization or dispersion, suggesting only weak attitude polarization. These results illustrate how the ASF is applicable to a wide range of social systems and offers an important avenue to understanding societal transformations.
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Affiliation(s)
- Ugo Arbieu
- Laboratoire d’Ecologie Systématique et Evolution, IDEEV, Université Paris-Saclay, 91190 Gif-sur-Yvette, France
- Senckenberg Biodiversity and Climate Research Centre (SBiK-F), Senckenberganlage, 60325 Frankfurt am Main, Germany
- Smithsonian Conservation Biology Institute, National Zoological Park, 1500 Remount Road, Front Royal, VA 22630, USA
| | - Jörg Albrecht
- Senckenberg Biodiversity and Climate Research Centre (SBiK-F), Senckenberganlage, 60325 Frankfurt am Main, Germany
| | - Katrin Böhning-Gaese
- Senckenberg Biodiversity and Climate Research Centre (SBiK-F), Senckenberganlage, 60325 Frankfurt am Main, Germany
- Department of Biological Sciences, Goethe University Frankfurt am Main, 60438 Frankfurt am Main, Germany
| | - Lisa Lehnen
- Senckenberg Biodiversity and Climate Research Centre (SBiK-F), Senckenberganlage, 60325 Frankfurt am Main, Germany
| | - Matthias Schleuning
- Senckenberg Biodiversity and Climate Research Centre (SBiK-F), Senckenberganlage, 60325 Frankfurt am Main, Germany
| | - Thomas Mueller
- Senckenberg Biodiversity and Climate Research Centre (SBiK-F), Senckenberganlage, 60325 Frankfurt am Main, Germany
- Department of Biological Sciences, Goethe University Frankfurt am Main, 60438 Frankfurt am Main, Germany
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15
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Woods T, Freeman MC, Krause KP, Maloney KO. Observed and projected functional reorganization of riverine fish assemblages from global change. GLOBAL CHANGE BIOLOGY 2023; 29:3759-3780. [PMID: 37021672 DOI: 10.1111/gcb.16707] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/04/2022] [Accepted: 03/03/2023] [Indexed: 06/06/2023]
Abstract
Climate and land-use/land-cover change ("global change") are restructuring biodiversity, globally. Broadly, environmental conditions are expected to become warmer, potentially drier (particularly in arid regions), and more anthropogenically developed in the future, with spatiotemporally complex effects on ecological communities. We used functional traits to inform Chesapeake Bay Watershed fish responses to future climate and land-use scenarios (2030, 2060, and 2090). We modeled the future habitat suitability of focal species representative of key trait axes (substrate, flow, temperature, reproduction, and trophic) and used functional and phylogenetic metrics to assess variable assemblage responses across physiographic regions and habitat sizes (headwaters through large rivers). Our focal species analysis projected future habitat suitability gains for carnivorous species with preferences for warm water, pool habitats, and fine or vegetated substrates. At the assemblage level, models projected decreasing habitat suitability for cold-water, rheophilic, and lithophilic individuals but increasing suitability for carnivores in the future across all regions. Projected responses of functional and phylogenetic diversity and redundancy differed among regions. Lowland regions were projected to become less functionally and phylogenetically diverse and more redundant while upland regions (and smaller habitat sizes) were projected to become more diverse and less redundant. Next, we assessed how these model-projected assemblage changes 2005-2030 related to observed time-series trends (1999-2016). Halfway through the initial projecting period (2005-2030), we found observed trends broadly followed modeled patterns of increasing proportions of carnivorous and lithophilic individuals in lowland regions but showed opposing patterns for functional and phylogenetic metrics. Leveraging observed and predicted analyses simultaneously helps elucidate the instances and causes of discrepancies between model predictions and ongoing observed changes. Collectively, results highlight the complexity of global change impacts across broad landscapes that likely relate to differences in assemblages' intrinsic sensitivities and external exposure to stressors.
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Affiliation(s)
- Taylor Woods
- Eastern Ecological Science Center, U.S. Geological Survey, West Virginia, Kearneysville, USA
| | - Mary C Freeman
- Eastern Ecological Science Center, U.S. Geological Survey, Georgia, Athens, USA
| | - Kevin P Krause
- Eastern Ecological Science Center, U.S. Geological Survey, West Virginia, Kearneysville, USA
| | - Kelly O Maloney
- Eastern Ecological Science Center, U.S. Geological Survey, West Virginia, Kearneysville, USA
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16
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Stefanoudis PV, Fassbender N, Samimi-Namin K, Adam PA, Ebrahim A, Harlay J, Koester A, Samoilys M, Sims H, Swanborn D, Talma S, Winter S, Woodall LC. Trait-based approaches reveal that deep reef ecosystems in the Western Indian Ocean are functionally distinct. THE SCIENCE OF THE TOTAL ENVIRONMENT 2023; 872:162111. [PMID: 36773924 DOI: 10.1016/j.scitotenv.2023.162111] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/17/2022] [Revised: 01/16/2023] [Accepted: 02/04/2023] [Indexed: 06/18/2023]
Abstract
Tropical deep reefs (>30 m) are biologically and ecologically unique ecosystems with a higher geographic reach to shallow (<30 m) reefs. Yet they are poorly understood and rarely considered in conservation practices. Here, we characterise benthic and fish communities across a depth gradient (10-350 m) in remote coral atolls in Seychelles, Western Indian Ocean. Using taxonomic and trait-based approaches we present the taxonomic and functional composition of shallow and deep reef communities, with distinct communities and traits dominating different depths. Depth-related changes in community metrics (taxa richness, abundance and biomass) and functional diversity metrics (richness, dispersion, and evenness) indicate complex relationships across different biological components (fish, benthos) that differ between shallow and deep reefs. These in turn translate into different patterns of reef resilience against disturbance or species invasions with depth. Notably, deep reefs host on average fewer and less abundant taxa but with higher functional contribution and originality scores, some of which are of conservation concern. Overall, the results highlight the unique nature of deep reefs that requires their explicit consideration in conservation and management activities.
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Affiliation(s)
- Paris V Stefanoudis
- Department of Biology, University of Oxford, Oxford, United Kingdom; Nekton Foundation, Oxford, United Kingdom.
| | | | - Kaveh Samimi-Namin
- Department of Biology, University of Oxford, Oxford, United Kingdom; Nekton Foundation, Oxford, United Kingdom; Taxonomy and Systematics Group, Naturalis Biodiversity Center, Leiden, Netherlands; Natural History Museum, London, United Kingdom
| | | | | | - Jerome Harlay
- Blue Economy Research Institute, University of Seychelles, Mahé, Seychelles
| | - Anna Koester
- Seychelles Islands Foundation, Victoria, Seychelles
| | - Melita Samoilys
- CORDIO East Africa, Mombasa, Kenya; Department of Biology, University of Oxford, Oxford, United Kingdom
| | - Helena Sims
- The Nature Conservancy, Victoria, Seychelles
| | - Denise Swanborn
- Department of Biology, University of Oxford, Oxford, United Kingdom; Nekton Foundation, Oxford, United Kingdom
| | | | | | - Lucy C Woodall
- Department of Biology, University of Oxford, Oxford, United Kingdom; Nekton Foundation, Oxford, United Kingdom
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17
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Xu WB, Guo WY, Serra-Diaz JM, Schrodt F, Eiserhardt WL, Enquist BJ, Maitner BS, Merow C, Violle C, Anand M, Belluau M, Bruun HH, Byun C, Catford JA, Cerabolini BE, Chacón-Madrigal E, Ciccarelli D, Cornelissen JHC, Dang-Le AT, de Frutos A, Dias AS, Giroldo AB, Gutiérrez AG, Hattingh W, He T, Hietz P, Hough-Snee N, Jansen S, Kattge J, Komac B, Kraft NJ, Kramer K, Lavorel S, Lusk CH, Martin AR, Ma KP, Mencuccini M, Michaletz ST, Minden V, Mori AS, Niinemets Ü, Onoda Y, Onstein RE, Peñuelas J, Pillar VD, Pisek J, Pound MJ, Robroek BJ, Schamp B, Slot M, Sun M, Sosinski ÊE, Soudzilovskaia NA, Thiffault N, van Bodegom PM, van der Plas F, Zheng J, Svenning JC, Ordonez A. Global beta-diversity of angiosperm trees is shaped by Quaternary climate change. SCIENCE ADVANCES 2023; 9:eadd8553. [PMID: 37018407 PMCID: PMC10075971 DOI: 10.1126/sciadv.add8553] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/08/2022] [Accepted: 03/08/2023] [Indexed: 06/19/2023]
Abstract
As Earth's climate has varied strongly through geological time, studying the impacts of past climate change on biodiversity helps to understand the risks from future climate change. However, it remains unclear how paleoclimate shapes spatial variation in biodiversity. Here, we assessed the influence of Quaternary climate change on spatial dissimilarity in taxonomic, phylogenetic, and functional composition among neighboring 200-kilometer cells (beta-diversity) for angiosperm trees worldwide. We found that larger glacial-interglacial temperature change was strongly associated with lower spatial turnover (species replacements) and higher nestedness (richness changes) components of beta-diversity across all three biodiversity facets. Moreover, phylogenetic and functional turnover was lower and nestedness higher than random expectations based on taxonomic beta-diversity in regions that experienced large temperature change, reflecting phylogenetically and functionally selective processes in species replacement, extinction, and colonization during glacial-interglacial oscillations. Our results suggest that future human-driven climate change could cause local homogenization and reduction in taxonomic, phylogenetic, and functional diversity of angiosperm trees worldwide.
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Affiliation(s)
- Wu-Bing Xu
- Center for Biodiversity Dynamics in a Changing World (BIOCHANGE), Department of Biology, Aarhus University, DK-8000 Aarhus C, Denmark
- Section for Ecoinformatics and Biodiversity, Department of Biology, Aarhus University, DK-8000 Aarhus C, Denmark
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, 04103 Leipzig, Germany
| | - Wen-Yong Guo
- Center for Biodiversity Dynamics in a Changing World (BIOCHANGE), Department of Biology, Aarhus University, DK-8000 Aarhus C, Denmark
- Section for Ecoinformatics and Biodiversity, Department of Biology, Aarhus University, DK-8000 Aarhus C, Denmark
- Zhejiang Tiantong Forest Ecosystem National Observation and Research Station and Research Center for Global Change and Complex Ecosystems, School of Ecological and Environmental Sciences, East China Normal University, 200241 Shanghai, P.R. China
| | | | - Franziska Schrodt
- School of Geography, University of Nottingham, Nottingham, NG7 2RD, UK
| | - Wolf L. Eiserhardt
- Section for Ecoinformatics and Biodiversity, Department of Biology, Aarhus University, DK-8000 Aarhus C, Denmark
- Royal Botanic Gardens, Kew, Surrey TW9 3AE, UK
| | - Brian J. Enquist
- Department of Ecology and Evolutionary Biology, University of Arizona, Tucson, AZ 85721, USA
- The Santa Fe Institute, 1399 Hyde Park Rd., Santa Fe, NM 87501, USA
| | - Brian S. Maitner
- Department of Ecology and Evolutionary Biology, University of Arizona, Tucson, AZ 85721, USA
| | - Cory Merow
- Department of Ecology and Evolutionary Biology, University of Connecticut, Storrs, CT 06269, USA
| | - Cyrille Violle
- CEFE, Univ Montpellier, CNRS, EPHE, IRD, Montpellier, France
| | - Madhur Anand
- School of Environmental Sciences, University of Guelph, Guelph, Ontario, Canada
| | - Michaël Belluau
- Centre for Forest Research, Département des sciences biologiques, Université du Québec à Montréal, P.O. Box 8888, Centre-ville station, Montréal, QC H3C 3P8, Canada
| | - Hans Henrik Bruun
- Department of Biology, University of Copenhagen, 2100 Copenhagen Ø, Denmark
| | - Chaeho Byun
- Department of Biological Sciences and Biotechnology, Andong National University, Andong, 36729, Korea
| | - Jane A. Catford
- Department of Geography, King’s College London, London WC2B 4BG, UK
| | - Bruno E. L. Cerabolini
- Department of Biotechnologies and Life Sciences, University of Insubria, Via Dunant 3, 21100 Varese, Italy
| | - Eduardo Chacón-Madrigal
- Herbario Luis Fournier Origgi, Centro de Investigación en Biodiversidad y Ecología Tropical (CIBET), Universidad de Costa Rica, San Pedro de Montes de Oca, 11501-2060 San José, Costa Rica
| | - Daniela Ciccarelli
- Department of Biology, University of Pisa, Via Luca Ghini 13, 56126 Pisa, Italy
| | - J. Hans C. Cornelissen
- Systems Ecology, A-LIFE, Faculty of Science, Vrije Universiteit, 1081 HV Amsterdam, Netherlands
| | - Anh Tuan Dang-Le
- Faculty of Biology - Biotechnology, University of Science - VNUHCM, 227 Nguyen Van Cu, District 5, 700000 Ho Chi Minh City, Vietnam
| | - Angel de Frutos
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, 04103 Leipzig, Germany
| | - Arildo S. Dias
- Goethe University, Institute for Physical Geography, Altenhöferallee 1, 60438 Frankfurt am Main, Germany
| | - Aelton B. Giroldo
- Departamento de Ensino, Instituto Federal de Educação, Ciências e Tecnologia do Ceará - IFCE campus Crateús, Avenida Geraldo Barbosa Marques, 567, 63708-260 Crateús, Brazil
| | - Alvaro G. Gutiérrez
- Departamento de Ciencias Ambientales y Recursos Naturales Renovables, Facultad de Ciencias Agronómicas, Universidad de Chile, Santa Rosa 11315, La Pintana, Santiago, Chile
- Institute of Ecology and Biodiversity (IEB), Santiago, Chile
| | - Wesley Hattingh
- Global Systems and Analytics, Nova Pioneer, Paulshof, Gauteng, South Africa
| | - Tianhua He
- School of Molecular and Life Sciences, Curtin University, P.O. Box U1987, Perth, WA 6845, Australia
- College of Science, Health, Engineering and Education, Murdoch University, Murdoch, WA, Australia
| | - Peter Hietz
- Institute of Botany, University of Natural Resources and Life Sciences Vienna, 1180 Vienna, Austria
| | | | - Steven Jansen
- Institute of Systematic Botany and Ecology, Ulm University, 89081 Ulm, Germany
| | - Jens Kattge
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, 04103 Leipzig, Germany
- Max Planck Institute for Biogeochemistry, Hans Knöll Str. 10, 07745 Jena, Germany
| | - Benjamin Komac
- Andorra Recerca + Innovació, AD600 Sant Julià de Lòria (Principat d'), Andorra
| | - Nathan J. B. Kraft
- Department of Ecology and Evolutionary Biology, University of California, Los Angeles, Los Angeles, CA 90095, USA
| | - Koen Kramer
- Wageningen University, Forest Ecology and Management Group, Droevendaalsesteeg 4, 6700AA Wageningen, Netherlands
- Land Life Company, Mauritskade 63, 1092AD, Amsterdam, Netherlands
| | - Sandra Lavorel
- Laboratoire d’Ecologie Alpine, LECA, UMR UGA-USMB-CNRS 5553, Université Grenoble Alpes, CS 40700, 38058 Grenoble Cedex 9, France
| | - Christopher H. Lusk
- Environmental Research Institute, University of Waikato, Hamilton, New Zealand
| | - Adam R. Martin
- Department of Physical and Environmental Sciences, University of Toronto Scarborough, 1265 Military Trail, M1C 1A4 Toronto, ON, Canada
| | - Ke-Ping Ma
- State Key Laboratory of Vegetation and Environmental Change, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China
| | - Maurizio Mencuccini
- ICREA, Barcelona, 08010, Spain
- CREAF, Cerdanyola del Vallès, Barcelona 08193, Catalonia, Spain
| | - Sean T. Michaletz
- Department of Botany and Biodiversity Research Centre, University of British Columbia, Vancouver, BC V6T 1Z4, Canada
| | - Vanessa Minden
- Department of Biology, Vrije Universiteit Brussel, Pleinlaan 2, 1050 Brussels, Belgium
- Institute for Biology and Environmental Sciences, University of Oldenburg, 26129 Oldenburg, Germany
| | - Akira S. Mori
- Research Center for Advanced Science and Technology, the University of Tokyo, 4-6-1 Komaba, Meguro, Tokyo 153-8904, Japan
| | - Ülo Niinemets
- Estonian University of Life Sciences, Kreutzwaldi 1, 51006 Tartu, Estonia
| | - Yusuke Onoda
- Division of Forest and Biomaterials Science, Graduate School of Agriculture, Kyoto University, Oiwake, Kitashirakawa, Kyoto, 606-8502 Japan
| | - Renske E. Onstein
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, 04103 Leipzig, Germany
- Naturalis Biodiversity Center, Darwinweg 2, 2333CR Leiden, Netherlands
| | - Josep Peñuelas
- CREAF, Cerdanyola del Vallès, Barcelona 08193, Catalonia, Spain
- CSIC, Global Ecology Unit CREAF- CSIC-UAB, Bellaterra, Barcelona 08193, Catalonia, Spain
| | - Valério D. Pillar
- Department of Ecology, Universidade Federal do Rio Grande do Sul, Porto Alegre, 91501-970, Brazil
| | - Jan Pisek
- Tartu Observatory, University of Tartu, Observatooriumi 1, Tõravere, 61602 Tartumaa, Estonia
| | - Matthew J. Pound
- Department of Geography and Environmental Sciences, Northumbria University, Newcastle upon Tyne NE1 8ST, UK
| | - Bjorn J. M. Robroek
- Aquatic Ecology and Environmental Biology, Faculty of Science, Radboud Institute for Biological and Environmental Sciences, Radboud University Nijmegen, 6525 AJ Nijmegen, Netherlands
| | - Brandon Schamp
- Department of Biology, Algoma University, Sault Ste. Marie, Ontario, P6A 2G4, Canada
| | - Martijn Slot
- Smithsonian Tropical Research Institute, Apartado 0843-03092, Balboa, Ancón, Republic of Panama
| | - Miao Sun
- Section for Ecoinformatics and Biodiversity, Department of Biology, Aarhus University, DK-8000 Aarhus C, Denmark
- National Key Laboratory for Germplasm Innovation & Utilization of Horticultural Crops, Huazhong Agricultural University, Wuhan 430070, China
| | | | | | - Nelson Thiffault
- Natural Resources Canada, Canadian Wood Fibre Centre, 1055 du P.E.P.S., P.O. Box 10380, Stn. Sainte-Foy, Quebec, QC G1V 4C7, Canada
| | - Peter M. van Bodegom
- Institute of Environmental Sciences, Leiden University, 2333 CC Leiden, Netherlands
| | - Fons van der Plas
- Plant Ecology and Nature Conservation Group, Wageningen University, Netherlands
| | - Jingming Zheng
- Beijing Key Laboratory for Forest Resources and Ecosystem Processes, Beijing Forestry University, Beijing, 100083, China
| | - Jens-Christian Svenning
- Center for Biodiversity Dynamics in a Changing World (BIOCHANGE), Department of Biology, Aarhus University, DK-8000 Aarhus C, Denmark
- Section for Ecoinformatics and Biodiversity, Department of Biology, Aarhus University, DK-8000 Aarhus C, Denmark
- Center for Ecological Dynamics in a Novel Biosphere (ECONOVO), Department of Biology, Aarhus University, DK-8000 Aarhus C, Denmark
| | - Alejandro Ordonez
- Center for Biodiversity Dynamics in a Changing World (BIOCHANGE), Department of Biology, Aarhus University, DK-8000 Aarhus C, Denmark
- Section for Ecoinformatics and Biodiversity, Department of Biology, Aarhus University, DK-8000 Aarhus C, Denmark
- Center for Ecological Dynamics in a Novel Biosphere (ECONOVO), Department of Biology, Aarhus University, DK-8000 Aarhus C, Denmark
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18
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Rocha BS, Logez M, Jamoneau A, Argillier C. Assessing resilience and sensitivity patterns for fish and phytoplankton in French lakes. Glob Ecol Conserv 2023. [DOI: 10.1016/j.gecco.2023.e02458] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/08/2023] Open
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19
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Martínez-Núñez C, Martínez-Prentice R, García-Navas V. Land-use diversity predicts regional bird taxonomic and functional richness worldwide. Nat Commun 2023; 14:1320. [PMID: 36899001 PMCID: PMC10006419 DOI: 10.1038/s41467-023-37027-5] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2022] [Accepted: 02/28/2023] [Indexed: 03/12/2023] Open
Abstract
Unveiling the processes that shape biodiversity patterns is a cornerstone of ecology. Land-use diversity (i.e., the variety of land-use categories within an area) is often considered an important environmental factor that promotes species richness at landscape and regional scales by increasing beta-diversity. Still, the role of land-use diversity in structuring global taxonomic and functional richness is unknown. Here, we examine the hypothesis that regional species taxonomic and functional richness is explained by global patterns of land-use diversity by analyzing distribution and trait data for all extant birds. We found strong support for our hypothesis. Land-use diversity predicted bird taxonomic and functional richness in almost all biogeographic realms, even after accounting for the effect of net primary productivity (i.e., a proxy of resource availability and habitat heterogeneity). This link was particularly consistent with functional richness compared to taxonomic richness. In the Palearctic and Afrotropic realms, a saturation effect was evident, suggesting a non-linear relationship between land-use diversity and biodiversity. Our results reveal that land-use diversity is a key environmental factor associated with several facets of bird regional diversity, widening our understanding of key large-scale predictors of biodiversity patterns. These results can contribute to policies aimed at minimizing regional biodiversity loss.
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Affiliation(s)
- Carlos Martínez-Núñez
- Department of Integrative Ecology, Estación Biológica de Doñana EBD (CSIC), Seville, Spain.
- Agroscope, Reckenholzstrasse 191, CH-8046, Zurich, Switzerland.
| | - Ricardo Martínez-Prentice
- Institute of Agriculture and Environmental Sciences, Estonian University of Life Sciences, Tartu, Estonia
| | - Vicente García-Navas
- Department of Integrative Ecology, Estación Biológica de Doñana EBD (CSIC), Seville, Spain
- Department of Evolutionary Biology and Environmental Studies, University of Zurich, Zurich, Switzerland
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20
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Cerini F, Childs DZ, Clements CF. A predictive timeline of wildlife population collapse. Nat Ecol Evol 2023; 7:320-331. [PMID: 36702859 DOI: 10.1038/s41559-023-01985-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/05/2022] [Accepted: 01/06/2023] [Indexed: 01/27/2023]
Abstract
Contemporary rates of biodiversity decline emphasize the need for reliable ecological forecasting, but current methods vary in their ability to predict the declines of real-world populations. Acknowledging that stressor effects start at the individual level, and that it is the sum of these individual-level effects that drives populations to collapse, shifts the focus of predictive ecology away from using predominantly abundance data. Doing so opens new opportunities to develop predictive frameworks that utilize increasingly available multi-dimensional data, which have previously been overlooked for ecological forecasting. Here, we propose that stressed populations will exhibit a predictable sequence of observable changes through time: changes in individuals' behaviour will occur as the first sign of increasing stress, followed by changes in fitness-related morphological traits, shifts in the dynamics (for example, birth rates) of populations and finally abundance declines. We discuss how monitoring the sequential appearance of these signals may allow us to discern whether a population is increasingly at risk of collapse, or is adapting in the face of environmental change, providing a conceptual framework to develop new forecasting methods that combine multi-dimensional (for example, behaviour, morphology, life history and abundance) data.
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Affiliation(s)
- Francesco Cerini
- School of Biological Sciences, University of Bristol, Bristol, UK.
| | - Dylan Z Childs
- School of Biosciences, University of Sheffield, Sheffield, UK
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21
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Jarzyna MA, Stagge JH. Decoupled spatiotemporal patterns of avian taxonomic and functional diversity. Curr Biol 2023; 33:1153-1161.e4. [PMID: 36822204 DOI: 10.1016/j.cub.2023.01.066] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/08/2022] [Revised: 12/27/2022] [Accepted: 01/30/2023] [Indexed: 02/24/2023]
Abstract
Each year, seasonal bird migration leads to an immense redistribution of species occurrence and abundances,1,2,3 with pervasive, though unclear, consequences for patterns of multi-faceted avian diversity. Here, we uncover stark disparities in spatiotemporal variation between avian taxonomic diversity (TD) and functional diversity (FD) across the continental US. We show that the seasonality of species richness expectedly3 follows a latitudinal gradient, whereas seasonality of FD instead manifests a distinct east-west gradient. In the eastern US, the temporal patterns of TD and FD are diametrically opposed. In winter, functional richness is highest despite seasonal species loss, and the remaining most abundant species are amassed in fewer regions of the functional space relative to the rest of the year, likely reflecting decreased resource availability. In contrast, temporal signatures for TD and FD are more congruent in the western US. There, both species and functional richness peak during the breeding season, and species' abundances are more regularly distributed and widely spread across the functional space than during winter. Our results suggest that migratory birds in the western US disproportionately contribute to avian FD by possessing more unique trait characteristics than resident birds,4,5 while the primary contribution of migrants in the eastern US is through increasing the regularity of abundances within the functional space relative to the rest of the year. We anticipate that the uncovered complexity of spatiotemporal associations among measures of avian diversity will be the catalyst for adopting an explicitly temporal framework for multi-faceted biodiversity analysis.
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Affiliation(s)
- Marta A Jarzyna
- Department of Evolution, Ecology and Organismal Biology, The Ohio State University, Columbus, OH 43210, USA; Translational Data Analytics Institute, The Ohio State University, Columbus, OH 43210, USA.
| | - James H Stagge
- Department of Civil, Environmental and Geodetic Engineering, The Ohio State University, Columbus, OH 43210, USA
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22
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Mendez Angarita VY, Maiorano L, Dragonetti C, Di Marco M. Implications of exceeding the Paris Agreement for mammalian biodiversity. CONSERVATION SCIENCE AND PRACTICE 2023. [DOI: 10.1111/csp2.12889] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/09/2023] Open
Affiliation(s)
| | - Luigi Maiorano
- Department of Biology and Biotechnologies “Charles Darwin” Sapienza University of Rome Italy
| | - Chiara Dragonetti
- Department of Biology and Biotechnologies “Charles Darwin” Sapienza University of Rome Italy
| | - Moreno Di Marco
- Department of Biology and Biotechnologies “Charles Darwin” Sapienza University of Rome Italy
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23
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O'Brien DA, Gal G, Thackeray SJ, Matsuzaki SS, Clements CF. Planktonic functional diversity changes in synchrony with lake ecosystem state. GLOBAL CHANGE BIOLOGY 2023; 29:686-701. [PMID: 36370051 PMCID: PMC10100413 DOI: 10.1111/gcb.16485] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 04/25/2022] [Revised: 08/23/2022] [Accepted: 10/07/2022] [Indexed: 06/16/2023]
Abstract
Managing ecosystems to effectively preserve function and services requires reliable tools that can infer changes in the stability and dynamics of a system. Conceptually, functional diversity (FD) appears as a sensitive and viable monitoring metric stemming from suggestions that FD is a universally important measure of biodiversity and has a mechanistic influence on ecological processes. It is however unclear whether changes in FD consistently occur prior to state responses or vice versa, with no current work on the temporal relationship between FD and state to support a transition towards trait-based indicators. There is consequently a knowledge gap regarding when functioning changes relative to biodiversity change and where FD change falls in that sequence. We therefore examine the lagged relationship between planktonic FD and abundance-based metrics of system state (e.g. biomass) across five highly monitored lake communities using both correlation and cutting edge non-linear empirical dynamic modelling approaches. Overall, phytoplankton and zooplankton FD display synchrony with lake state but each lake is idiosyncratic in the strength of relationship. It is therefore unlikely that changes in plankton FD are identifiable before changes in more easily collected abundance metrics. These results highlight the power of empirical dynamic modelling in disentangling time lagged relationships in complex multivariate ecosystems, but suggest that FD cannot be generically viable as an early indicator. Individual lakes therefore require consideration of their specific context and any interpretation of FD across systems requires caution. However, FD still retains value as an alternative state measure or a trait representation of biodiversity when considered at the system level.
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Affiliation(s)
| | - Gideon Gal
- Kinneret Limnological LaboratoryIsrael Oceanographic and Limnological ResearchMigdalIsrael
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24
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Huang M, Huang G, Fan H, Wei F. Influence of Last Glacial Maximum legacies on functional diversity and community assembly of extant Chinese terrestrial vertebrates. Innovation (N Y) 2023; 4:100379. [PMID: 36747592 PMCID: PMC9898789 DOI: 10.1016/j.xinn.2023.100379] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/06/2022] [Accepted: 01/02/2023] [Indexed: 01/07/2023] Open
Abstract
Contemporary biodiversity patterns are shaped by not only modern climate but also factors such as past climate fluctuations. Investigating the relative degree of paleoclimate legacy could help us understand the formation of current biodiversity patterns. However, an assessment of this issue in China is lacking. Here, we investigated the phylogenetic structure and functional diversity patterns of Chinese terrestrial vertebrates. We found that Southern China harbored higher functional richness, while Northern and Western China were more phylogenetically clustered with higher functional divergence and evenness, indicating environmental filtering effects. Moreover, we found that drastic Last Glacial Maximum climate changes were positively related to phylogenetic clustering, lower functional richness, and higher functional divergence and evenness, although this effect varied among different taxonomic groups. We further found that mammal communities experiencing more drastic Last Glacial Maximum temperature changes were characterized by "faster" life-history trait values. Our findings provide new evidence of the paleoclimate change legacies influencing contemporary biodiversity patterns that will help guide national-level conservation plans.
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Affiliation(s)
- Mingpan Huang
- CAS Key Laboratory of Animal Ecology and Conservation Biology, Institute of Zoology, Chinese Academy of Sciences, Beijing 100101, China
- Center for Evolution and Conservation Biology, Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou), Guangzhou 511458, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Guangping Huang
- CAS Key Laboratory of Animal Ecology and Conservation Biology, Institute of Zoology, Chinese Academy of Sciences, Beijing 100101, China
| | - Huizhong Fan
- CAS Key Laboratory of Animal Ecology and Conservation Biology, Institute of Zoology, Chinese Academy of Sciences, Beijing 100101, China
| | - Fuwen Wei
- CAS Key Laboratory of Animal Ecology and Conservation Biology, Institute of Zoology, Chinese Academy of Sciences, Beijing 100101, China
- Center for Evolution and Conservation Biology, Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou), Guangzhou 511458, China
- University of Chinese Academy of Sciences, Beijing 100049, China
- Corresponding author
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25
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Song WY, Onditi KO, Li XY, Chen ZZ, He SW, Li Q, Jiang XL. Decomposing niche components reveals simultaneous effects of opposite deterministic processes structuring alpine small mammal assembly. Front Ecol Evol 2023. [DOI: 10.3389/fevo.2022.999573] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023] Open
Abstract
IntroductionSpecies distribution in alpine areas is constrained by multiple abiotic and biotic stressors. This leads to discrepant assembly patterns between different locations and study objects as opposite niche-based processes—limiting similarity and habitat filtering—simultaneously structure communities, masking overall patterns. We aimed to address how these processes structure small mammal communities in the alpine tree line transition zone, one of the most distinct vegetation transitions between alpine and montane habitats.MethodsWe compiled a dataset of species checklist, phylogeny, and functional traits from field collection and published sources spanning 18 mountains in southwest China. We first examined hypothetical niche-based processes with frequently used phylogenetic and trait approaches using this dataset. The species traits were decomposed into different niche components to explore the respective effects of specific stressors. Indices representing evolutionary history, trait space, and pairwise species distance were estimated and compared with null model expectations. Linear mixed-effect models were used to assess the association patterns between diversity indices and elevation.ResultsThe results indicated that phylogenetic and functional richness were positively correlated with species richness. In contrast, distance-based indices were either negatively or weakly positively correlated with species richness. Null model analyses suggested no evidence of non-random phylogenetic or overall trait patterns. However, the resource acquisition niche tended to be more overdispersed (positive slopes), while the habitat affinity niche tended to be more clustered (negative slopes) beyond the high elevation tree line.DiscussionThese findings show that opposite niche-based processes simultaneously structure small mammal communities in alpine areas. Overall, the present study provides vital insights into the complexity of assembly processes in these habitats. It also highlights the importance of relating relevant traits to distinguish the influences of specific abiotic and biotic stressors.
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26
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Jurburg SD, Buscot F, Chatzinotas A, Chaudhari NM, Clark AT, Garbowski M, Grenié M, Hom EFY, Karakoç C, Marr S, Neumann S, Tarkka M, van Dam NM, Weinhold A, Heintz-Buschart A. The community ecology perspective of omics data. MICROBIOME 2022; 10:225. [PMID: 36510248 PMCID: PMC9746134 DOI: 10.1186/s40168-022-01423-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 04/03/2022] [Accepted: 11/10/2022] [Indexed: 06/17/2023]
Abstract
The measurement of uncharacterized pools of biological molecules through techniques such as metabarcoding, metagenomics, metatranscriptomics, metabolomics, and metaproteomics produces large, multivariate datasets. Analyses of these datasets have successfully been borrowed from community ecology to characterize the molecular diversity of samples (ɑ-diversity) and to assess how these profiles change in response to experimental treatments or across gradients (β-diversity). However, sample preparation and data collection methods generate biases and noise which confound molecular diversity estimates and require special attention. Here, we examine how technical biases and noise that are introduced into multivariate molecular data affect the estimation of the components of diversity (i.e., total number of different molecular species, or entities; total number of molecules; and the abundance distribution of molecular entities). We then explore under which conditions these biases affect the measurement of ɑ- and β-diversity and highlight how novel methods commonly used in community ecology can be adopted to improve the interpretation and integration of multivariate molecular data. Video Abstract.
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Affiliation(s)
- Stephanie D Jurburg
- Department of Environmental Microbiology, Helmholtz Centre for Environmental Research - UFZ, Leipzig, Germany.
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig, Germany.
- Institute of Biology, Leipzig University, Leipzig, Germany.
| | - François Buscot
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig, Germany
- Department of Soil Ecology, Helmholtz Centre for Environmental Research- UFZ, Halle, Germany
| | - Antonis Chatzinotas
- Department of Environmental Microbiology, Helmholtz Centre for Environmental Research - UFZ, Leipzig, Germany
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig, Germany
- Institute of Biology, Leipzig University, Leipzig, Germany
| | - Narendrakumar M Chaudhari
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig, Germany
- Institute of Biodiversity, Friedrich Schiller University, Jena, Germany
| | - Adam T Clark
- Institute of Biology, University of Graz, Graz, Austria
| | - Magda Garbowski
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig, Germany
- Department of Botany, University of Wyoming, Wyoming, USA
| | - Matthias Grenié
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig, Germany
- Institute of Biology, Leipzig University, Leipzig, Germany
| | - Erik F Y Hom
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig, Germany
- Department of Biology and Center for Biodiversity and Conservation Research, University of Mississippi, Oxford, Mississippi, USA
| | - Canan Karakoç
- Department of Environmental Microbiology, Helmholtz Centre for Environmental Research - UFZ, Leipzig, Germany
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig, Germany
- Department of Biology, Indiana University, Indiana, USA
| | - Susanne Marr
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig, Germany
- Institute of Biology, Geobotany and Botanical Garden, Martin Luther University Halle Wittenberg, Halle, Germany
- Leibniz Institute of Plant Biochemistry, Bioinformatics and Scientific Data, Halle, Germany
| | - Steffen Neumann
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig, Germany
- Leibniz Institute of Plant Biochemistry, Bioinformatics and Scientific Data, Halle, Germany
| | - Mika Tarkka
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig, Germany
- Department of Soil Ecology, Helmholtz Centre for Environmental Research- UFZ, Halle, Germany
| | - Nicole M van Dam
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig, Germany
- Institute of Biodiversity, Friedrich Schiller University, Jena, Germany
- Leibniz Institute of Vegetable and Ornamental Crops (IGZ), Großbeeren, Germany
| | - Alexander Weinhold
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig, Germany
- Institute of Biodiversity, Friedrich Schiller University, Jena, Germany
| | - Anna Heintz-Buschart
- Swammerdam Institute for Life Sciences, University of Amsterdam, Amsterdam, Netherlands
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27
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Streit RP, Bellwood DR. To harness traits for ecology, let’s abandon ‘functionality’. Trends Ecol Evol 2022; 38:402-411. [PMID: 36522192 DOI: 10.1016/j.tree.2022.11.009] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/07/2022] [Revised: 11/16/2022] [Accepted: 11/21/2022] [Indexed: 12/14/2022]
Abstract
Traits are measurable features of organisms. Functional traits aspire to more. They quantify an organism's ecology and, ultimately, predict ecosystem functions based on local communities. Such predictions are useful, but only if 'functional' really means 'ecologically relevant'. Unfortunately, many 'functional' traits seem to be characterized primarily by availability and implied importance - not by their ecological information content. Better traits are needed, but a prevailing trend is to 'functionalize' existing traits. The key may be to invert the process, that is, to identify functions of interest first and then identify traits as quantifiable proxies. We propose two distinct, yet complementary, perspectives on traits and provide a 'taxonomy of traits', a conceptual compass to navigate the diverse applications of traits in ecology.
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28
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Ao S, Ye L, Liu X, Cai Q, He F. Elevational patterns of trait composition and functional diversity of stream macroinvertebrates in the Hengduan Mountains region, Southwest China. ECOLOGICAL INDICATORS 2022; 144:109558. [DOI: 10.1016/j.ecolind.2022.109558] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/15/2023]
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29
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Pinilla-Rosa M, García-Saúco G, Santiago A, Ferrandis P, Méndez M. Can botanic gardens serve as refuges for taxonomic and functional diversity of Odonata? The case of the botanic garden of Castilla-La Mancha (Spain). LIMNOLOGY 2022; 24:37-50. [PMID: 36258754 PMCID: PMC9559554 DOI: 10.1007/s10201-022-00704-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/26/2022] [Accepted: 09/17/2022] [Indexed: 06/16/2023]
Abstract
UNLABELLED In a scenario with declining biodiversity and habitat loss, botanic gardens could serve as refuges for invertebrates, but the opportunities they offer for animal conservation are still poorly understood. Odonata is a good model group for conservation studies, because it includes threatened species and responses to habitat disturbance are well documented. In this study, we assessed the role of the botanic garden of Castilla-La Mancha in Spain as a refuge for members of Odonata by analysing their taxonomic and functional diversity. We explored if the small size of the botanic garden might constrain the taxonomic diversity of Odonata and if low habitat diversity might limit their functional diversity. We sampled adult Odonata from five water bodies along a gradient of human impact and characterized the Odonata communities based on 12 functional traits in Odonata. We used a species-area relationship to control for differences in the size of water bodies. Compared with natural lakes, the Odonata communities contained less species and their functional diversity was lower in the botanic garden ponds, where generalist species were basically hosted. Despite these limitations, the botanic garden ponds hosted the number of species expected for natural water bodies with the moderate surface area and functional diversity, thereby demonstrating that they are a valuable habitat for Odonata in an urban environment. Appropriate management involving the removal of exotic fish and habitat diversification, including creating lotic environments, would increase the taxonomic and functional diversity of Odonata in this urban system. SUPPLEMENTARY INFORMATION The online version contains supplementary material available at 10.1007/s10201-022-00704-3.
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Affiliation(s)
| | | | - Alejandro Santiago
- Botanic garden of Castilla-La Mancha, Avda. de La Mancha s/n, 02006 Albacete, Spain
| | - Pablo Ferrandis
- Botanic garden of Castilla-La Mancha, Avda. de La Mancha s/n, 02006 Albacete, Spain
- Botanic Institute of the University of Castilla-La Mancha, Avda. de La Mancha s/n, 02006 Albacete, Spain
| | - Marcos Méndez
- University Rey Juan Carlos, C/ Tulipán s/n, 28933 Móstoles, Madrid Spain
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Luther DA, Cooper WJ, Jirinec V, Wolfe JD, Rutt CL, Bierregaard Jr RO, Lovejoy TE, Stouffer PC. Long-term changes in avian biomass and functional diversity within disturbed and undisturbed Amazonian rainforest. Proc Biol Sci 2022; 289:20221123. [PMID: 35975441 PMCID: PMC9382209 DOI: 10.1098/rspb.2022.1123] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/09/2022] [Accepted: 07/22/2022] [Indexed: 12/14/2022] Open
Abstract
Recent long-term studies in protected areas have revealed the loss of biodiversity, yet the ramifications for ecosystem health and resilience remain unknown. Here, we investigate how the loss of understory birds, in the lowest stratum of the forest, affects avian biomass and functional diversity in the Amazon rainforest. Across approximately 30 years in the Biological Dynamics of Forest Fragments Project, we used a historical baseline of avian communities to contrast the avian communities in today's primary forest with those in modern disturbed habitat. We found that in primary rainforest, the reduced abundance of insectivorous species led to reduced functional diversity, but no reduction of biomass, indicating that species with similar functional traits are less likely to coexist in modern primary forests. Because today's forests contain fewer functionally redundant species-those with similar traits-we argue that avian communities in modern primary Amazonian rainforests are less resilient, which may ultimately disrupt the ecosystem in dynamic and unforeseen ways.
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Affiliation(s)
- David A. Luther
- Biology Department, George Mason University, 4400 University Drive, Fairfax, VA 22030, USA
- Biological Dynamics of Forest Fragments Project, Instituto Nacional de Pesquisas da Amazônia (INPA), Manaus, AM, Brazil
| | - W. Justin Cooper
- Biology Department, George Mason University, 4400 University Drive, Fairfax, VA 22030, USA
| | - Vitek Jirinec
- Biological Dynamics of Forest Fragments Project, Instituto Nacional de Pesquisas da Amazônia (INPA), Manaus, AM, Brazil
- Integral Ecology Research Center, 239 Railroad Avenue, Blue Lake, CA 95525, USA
- School of Renewable Natural Resources, Louisiana State University AgCenter and Louisiana State University, Baton Rouge, LA 70803, USA
| | - Jared D. Wolfe
- College of Forest Resources and Environmental Science, Michigan Technological University, Houghton, MI, USA
| | - Cameron L. Rutt
- Biology Department, George Mason University, 4400 University Drive, Fairfax, VA 22030, USA
- Biological Dynamics of Forest Fragments Project, Instituto Nacional de Pesquisas da Amazônia (INPA), Manaus, AM, Brazil
- American Bird Conservancy, The Plains, VA 20198, USA
| | | | - Thomas E. Lovejoy
- Environmental Science and Policy Department, George Mason University, 4400 University Drive, Fairfax, VA 22030, USA
- Biological Dynamics of Forest Fragments Project, Instituto Nacional de Pesquisas da Amazônia (INPA), Manaus, AM, Brazil
| | - Philip C Stouffer
- Biological Dynamics of Forest Fragments Project, Instituto Nacional de Pesquisas da Amazônia (INPA), Manaus, AM, Brazil
- School of Renewable Natural Resources, Louisiana State University AgCenter and Louisiana State University, Baton Rouge, LA 70803, USA
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Renault D, Hess MCM, Braschi J, Cuthbert RN, Sperandii MG, Bazzichetto M, Chabrerie O, Thiébaut G, Buisson E, Grandjean F, Bittebiere AK, Mouchet M, Massol F. Advancing biological invasion hypothesis testing using functional diversity indices. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 834:155102. [PMID: 35398434 DOI: 10.1016/j.scitotenv.2022.155102] [Citation(s) in RCA: 12] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/17/2022] [Revised: 03/31/2022] [Accepted: 04/03/2022] [Indexed: 06/14/2023]
Abstract
Pioneering investigations on the effects of introduced populations on community structure, ecosystem functioning and services have focused on the effects of invaders on taxonomic diversity. However, taxonomic-based diversity metrics overlook the heterogeneity of species roles within and among communities. As the homogenizing effects of biological invasions on community and ecosystem processes can be subtle, they may require the use of functional diversity indices to be properly evidenced. Starting from the listing of major functional diversity indices, alongside the presentation of their strengths and limitations, we focus on studies pertaining to the effects of invasive species on native communities and recipient ecosystems using functional diversity indices. By doing so, we reveal that functional diversity of the recipient community may strongly vary at the onset of the invasion process, while it stabilizes at intermediate and high levels of invasion. As functional changes occurring during the lag phase of an invasion have been poorly investigated, we show that it is still unknown whether there are consistent changes in functional diversity metrics that could indicate the end of the lag phase. Thus, we recommend providing information on the invasion stage under consideration when computing functional diversity metrics. For the existing literature, it is also surprising that very few studies explored the functional difference between organisms from the recipient communities and invaders of the same trophic levels, or assessed the effects of non-native organism establishment into a non-analogue versus an analogue community. By providing valuable tools for obtaining in-depth diagnostics of community structure and functioning, functional diversity indices can be applied for timely implementation of restoration plans and improved conservation strategies. To conclude, our work provides a first synthetic guide for their use in hypothesis testing in invasion biology.
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Affiliation(s)
- David Renault
- University of Rennes, CNRS, ECOBIO [(Ecosystèmes, biodiversité, évolution)] - UMR 6553, Rennes, France; Institut Universitaire de France, 1 rue Descartes, 75231 Paris Cedex 05, France.
| | - Manon C M Hess
- Institut Méditerranéen de Biodiversité et d'Écologie marine et continentale (IMBE), UMR Aix Marseille Université, Avignon Université, CNRS, IRD, France; Institut de recherche pour la conservation des zones humides méditerranéennes Tour du Valat, Le Sambuc, 13200 Arles, France; NGE-GUINTOLI, Saint-Etienne du Grès, Parc d'activités de Laurade - BP22, 13156 Tarascon Cedex, France
| | - Julie Braschi
- Institut Méditerranéen de Biodiversité et d'Écologie marine et continentale (IMBE), UMR Aix Marseille Université, Avignon Université, CNRS, IRD, France; Naturalia-Environnement, Ingénierie en écologie, 20 Rue Lawrence Durrell, 84140 Avignon, France
| | - Ross N Cuthbert
- GEOMAR Helmholtz-Zentrum für Ozeanforschung Kiel, 24105 Kiel, Germany; School of Biological Sciences, Queen's University Belfast, BT9 5DL Belfast, United Kingdom
| | - Marta G Sperandii
- Dipartimento di Scienze, Università degli Studi Roma Tre, Viale G. Marconi 446, 00146 Roma, Italy
| | - Manuele Bazzichetto
- University of Rennes, CNRS, ECOBIO [(Ecosystèmes, biodiversité, évolution)] - UMR 6553, Rennes, France
| | - Olivier Chabrerie
- Université de Picardie Jules Verne, UMR 7058 CNRS EDYSAN, 1 rue des Louvels, 80037 Amiens Cedex 1, France
| | - Gabrielle Thiébaut
- University of Rennes, CNRS, ECOBIO [(Ecosystèmes, biodiversité, évolution)] - UMR 6553, Rennes, France
| | - Elise Buisson
- Institut Méditerranéen de Biodiversité et d'Écologie marine et continentale (IMBE), UMR Aix Marseille Université, Avignon Université, CNRS, IRD, France
| | - Frédéric Grandjean
- Université de Poitiers, UMR CNRS 7267 EBI- Ecologie et Biologie des Interactions, équipe EES, 5 rue Albert Turpin, Bat B8-B35, TSA 51106, 86073 Poitiers Cedex 09, France
| | - Anne-Kristel Bittebiere
- Univ Lyon, Université Claude Bernard Lyon 1, CNRS, ENTPE, UMR5023 LEHNA, F-69622 Villeurbanne, France
| | - Maud Mouchet
- UMR 7204 MNHN-SU-CNRS CESCO, CP135, 57 rue Cuvier, 75005 Paris, France
| | - François Massol
- Univ. Lille, CNRS, Inserm, CHU Lille, Institut Pasteur de Lille, U1019 - UMR 8204 - CIIL - Center for Infection and Immunity of Lille, F-59000 Lille, France
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Shirey V, Larsen E, Doherty A, Kim CA, Al-Sulaiman FT, Hinolan JD, Itliong MGA, Naive MAK, Ku M, Belitz M, Jeschke G, Barve V, Lamas G, Kawahara AY, Guralnick R, Pierce NE, Lohman DJ, Ries L. LepTraits 1.0 A globally comprehensive dataset of butterfly traits. Sci Data 2022; 9:382. [PMID: 35794183 PMCID: PMC9259668 DOI: 10.1038/s41597-022-01473-5] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/23/2022] [Accepted: 06/13/2022] [Indexed: 12/04/2022] Open
Abstract
Here, we present the largest, global dataset of Lepidopteran traits, focusing initially on butterflies (ca. 12,500 species records). These traits are derived from field guides, taxonomic treatments, and other literature resources. We present traits on wing size, phenology,voltinism, diapause/overwintering stage, hostplant associations, and habitat affinities (canopy, edge, moisture, and disturbance). This dataset will facilitate comparative research on butterfly ecology and evolution and our goal is to inspire future research collaboration and the continued development of this dataset. Measurement(s) | Wingspan • Habitat Affinity • oviposition • voltinism • phenology • hostplant association | Technology Type(s) | natural language processing | Sample Characteristic - Organism | Lepidoptera | Sample Characteristic - Location | Global |
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Graco‐Roza C, Aarnio S, Abrego N, Acosta ATR, Alahuhta J, Altman J, Angiolini C, Aroviita J, Attorre F, Baastrup‐Spohr L, Barrera‐Alba JJ, Belmaker J, Biurrun I, Bonari G, Bruelheide H, Burrascano S, Carboni M, Cardoso P, Carvalho JC, Castaldelli G, Christensen M, Correa G, Dembicz I, Dengler J, Dolezal J, Domingos P, Erös T, Ferreira CEL, Filibeck G, Floeter SR, Friedlander AM, Gammal J, Gavioli A, Gossner MM, Granot I, Guarino R, Gustafsson C, Hayden B, He S, Heilmann‐Clausen J, Heino J, Hunter JT, Huszar VLM, Janišová M, Jyrkänkallio‐Mikkola J, Kahilainen KK, Kemppinen J, Kozub Ł, Kruk C, Kulbiki M, Kuzemko A, Christiaan le Roux P, Lehikoinen A, Teixeira de Lima D, Lopez‐Urrutia A, Lukács BA, Luoto M, Mammola S, Marinho MM, Menezes LS, Milardi M, Miranda M, Moser GAO, Mueller J, Niittynen P, Norkko A, Nowak A, Ometto JP, Ovaskainen O, Overbeck GE, Pacheco FS, Pajunen V, Palpurina S, Picazo F, Prieto JAC, Rodil IF, Sabatini FM, Salingré S, De Sanctis M, Segura AM, da Silva LHS, Stevanovic ZD, Swacha G, Teittinen A, Tolonen KT, Tsiripidis I, Virta L, Wang B, Wang J, Weisser W, Xu Y, Soininen J. Distance decay 2.0 - A global synthesis of taxonomic and functional turnover in ecological communities. GLOBAL ECOLOGY AND BIOGEOGRAPHY : A JOURNAL OF MACROECOLOGY 2022; 31:1399-1421. [PMID: 35915625 PMCID: PMC9322010 DOI: 10.1111/geb.13513] [Citation(s) in RCA: 13] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/23/2021] [Revised: 04/02/2022] [Accepted: 04/06/2022] [Indexed: 05/05/2023]
Abstract
AIM Understanding the variation in community composition and species abundances (i.e., β-diversity) is at the heart of community ecology. A common approach to examine β-diversity is to evaluate directional variation in community composition by measuring the decay in the similarity among pairs of communities along spatial or environmental distance. We provide the first global synthesis of taxonomic and functional distance decay along spatial and environmental distance by analysing 148 datasets comprising different types of organisms and environments. LOCATION Global. TIME PERIOD 1990 to present. MAJOR TAXA STUDIED From diatoms to mammals. METHOD We measured the strength of the decay using ranked Mantel tests (Mantel r) and the rate of distance decay as the slope of an exponential fit using generalized linear models. We used null models to test whether functional similarity decays faster or slower than expected given the taxonomic decay along the spatial and environmental distance. We also unveiled the factors driving the rate of decay across the datasets, including latitude, spatial extent, realm and organismal features. RESULTS Taxonomic distance decay was stronger than functional distance decay along both spatial and environmental distance. Functional distance decay was random given the taxonomic distance decay. The rate of taxonomic and functional spatial distance decay was fastest in the datasets from mid-latitudes. Overall, datasets covering larger spatial extents showed a lower rate of decay along spatial distance but a higher rate of decay along environmental distance. Marine ecosystems had the slowest rate of decay along environmental distances. MAIN CONCLUSIONS In general, taxonomic distance decay is a useful tool for biogeographical research because it reflects dispersal-related factors in addition to species responses to climatic and environmental variables. Moreover, functional distance decay might be a cost-effective option for investigating community changes in heterogeneous environments.
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Ao S, Li X, Tian Z, Hu J, Cai Q. Harmonizing and Searching Macroinvertebrate Trait Information in Alpine Streams: Method and Application–A Case Study in the Three Parallel Rivers Region, China. Front Ecol Evol 2022. [DOI: 10.3389/fevo.2022.945824] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
The traits of organisms provide critical information for understanding changes in biodiversity and ecosystem function at large scales. In recent years, trait databases of macroinvertebrates have been developed across continents. Anyone using different databases to search for traits will encounter a series of problems that lead to uncertain results due to the inconsistency of the trait information. For example, traits for a particular macroinvertebrate taxon may be inconsistent across databases, coded in inconsistent ways, or cannot be found. However, most of the current studies do not clearly state their solutions, which seriously hinders the accuracy and comparability of global trait studies. To solve these problems, we collected representative databases from several continents, including the United States, Europe, South Africa, Bolivia, Australia, and New Zealand. By comparing the inconsistency of similar trait classifications in the nine databases, we harmonized 41 of these grouping features. We found that these databases differed widely in terms of the range and category of traits. And the method of coding traits also varies from database to database. Moreover, we showed a set of trait searching rules that integrate trait databases from different regions of the world, allowing traits to be identified more easily and uniformly using different trait databases worldwide. We also applied this method to determine the traits of 155 macroinvertebrate taxa in the Three Parallel Rivers Region (TPRR). The results showed that among a total of 155 macroinvertebrate taxa, the 41 grouping features of all genera were not fully identified, and 32 genera were not recorded (thus using family-level data). No trait information was found at all for two families, which contain two genera. This suggests that many macroinvertebrate taxa and their traits have not been fully studied, especially in those regions, including China, where macroinvertebrate trait studies are lagging. This inadequacy and unevenness have seriously hindered the study and development of macroinvertebrate trait and functional diversity worldwide. Our results complement the information on stream macroinvertebrate traits in the TPRR, a global biodiversity hotspot, and greatly promote the uniformity of global trait research and the accuracy and comparability of trait research in different regions.
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Lin WH, Lai SM, Davis AJ, Liu WC, Jordán F. A network-based measure of functional diversity in food webs. Biol Lett 2022; 18:20220183. [PMID: 35765809 DOI: 10.1098/rsbl.2022.0183] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
Biodiversity is measured from various perspectives. One of them, functional diversity, quantifies the heterogeneity in species traits and roles in an ecosystem. One important aspect of species roles is their interactions with other species, i.e. their network role. We therefore investigate here functional diversity from the network perspective. Species differ in their network positions in a food web, having different interaction patterns. We developed a measure for quantifying the diversity in species interaction patterns in a food web. We examined the relationship between interaction diversity and several global network properties for 92 food webs. Our results showed that high interaction diversity occurs in sparsely connected and less cohesive food webs. High interaction diversity also occurred in food webs with more clusters and high network modularity. We also quantified several conventional functional diversity indices and demonstrate that they show little or no correlation with interaction diversity. Our proposed diversity index therefore provides a measure complementary to current concepts of functional diversity.
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Affiliation(s)
- Wen-Hsien Lin
- Genome and Systems Biology Degree Program, Academia Sinica and National Taiwan University, Taipei, Taiwan
| | - Shu-Mei Lai
- Institute of Statistical Science, Academia Sinica, Taipei, Taiwan
| | - Andrew J Davis
- J.F. Blumenbach Institute of Zoology and Anthropology, University of Göttingen, Göttingen, Germany
| | - Wei-Chung Liu
- Institute of Statistical Science, Academia Sinica, Taipei, Taiwan
| | - Ferenc Jordán
- Department of Political Sciences, Democracy Institute, Central European University, Budapest, Hungary.,Stazione Zoologica Anton Dohrn, Naples, Italy.,Department of Chemistry, Life Sciences and Environmental Sustainability, University of Parma, Italy
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A trait database and updated checklist for European subterranean spiders. Sci Data 2022; 9:236. [PMID: 35618868 PMCID: PMC9135732 DOI: 10.1038/s41597-022-01316-3] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/01/2021] [Accepted: 04/05/2022] [Indexed: 01/25/2023] Open
Abstract
Species traits are an essential currency in ecology, evolution, biogeography, and conservation biology. However, trait databases are unavailable for most organisms, especially those living in difficult-to-access habitats such as caves and other subterranean ecosystems. We compiled an expert-curated trait database for subterranean spiders in Europe using both literature data (including grey literature published in many different languages) and direct morphological measurements whenever specimens were available to us. We started by updating the checklist of European subterranean spiders, now including 512 species across 20 families, of which at least 192 have been found uniquely in subterranean habitats. For each of these species, we compiled 64 traits. The trait database encompasses morphological measures, including several traits related to subterranean adaptation, and ecological traits referring to habitat preference, dispersal, and feeding strategies. By making these data freely available, we open up opportunities for exploring different research questions, from the quantification of functional dimensions of subterranean adaptation to the study of spatial patterns in functional diversity across European caves. Measurement(s) | morphological trait • ecological trait | Technology Type(s) | literature extraction • observation | Sample Characteristic - Organism | Agelenidae • Amaurobiidae • Anapidae • Cybaeidae • Dysderidae • Hahniidae • Leptonetidae • Linyphiidae • Liocranidae • Mysmenidae • Nesticidae • Pholcidae • Pimoidae • Segestriidae • Sicariidae • Sparassidae • Symphytognathidae • Telemidae • Tetragnathidae • Theridiidae | Sample Characteristic - Environment | caves • subterranean habitats | Sample Characteristic - Location | Europe |
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Iannella M, Fiasca B, Di Lorenzo T, Di Cicco M, Biondi M, Mammola S, Galassi DM. Getting the ‘most out of the hotspot’ for practical conservation of groundwater biodiversity. Glob Ecol Conserv 2021. [DOI: 10.1016/j.gecco.2021.e01844] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022] Open
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