1
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Zimmerman DM, Hardgrove E, Sullivan S, Mitchell S, Kambale E, Nziza J, Ssebide B, Shalukoma C, Cranfield M, Pandit PS, Troth SP, Callicrate T, Miller P, Gilardi K, Lacy RC. Projecting the impact of an ebola virus outbreak on endangered mountain gorillas. Sci Rep 2023; 13:5675. [PMID: 37029156 PMCID: PMC10082040 DOI: 10.1038/s41598-023-32432-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/07/2022] [Accepted: 03/28/2023] [Indexed: 04/09/2023] Open
Abstract
Ebola virus is highly lethal for great apes. Estimated mortality rates up to 98% have reduced the global gorilla population by approximately one-third. As mountain gorillas (Gorilla beringei beringei) are endangered, with just over 1000 individuals remaining in the world, an outbreak could decimate the population. Simulation modeling was used to evaluate the potential impact of an Ebola virus outbreak on the mountain gorilla population of the Virunga Massif. Findings indicate that estimated contact rates among gorilla groups are high enough to allow rapid spread of Ebola, with less than 20% of the population projected to survive at 100 days post-infection of just one gorilla. Despite increasing survival with vaccination, no modeled vaccination strategy prevented widespread infection. However, the model projected that survival rates greater than 50% could be achieved by vaccinating at least half the habituated gorillas within 3 weeks of the first infectious individual.
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Affiliation(s)
- Dawn M Zimmerman
- Veterinary Initiative for Endangered Wildlife, Bozeman, MT, USA.
- Smithsonian Institution, National Museum of Natural History, Washington, DC, USA.
- Department of Epidemiology of Microbial Disease, Yale School of Public Health, New Haven, CT, USA.
| | - Emily Hardgrove
- Virginia-Maryland Regional College of Veterinary Medicine, Virginia Tech, Blacksburg, VA, USA
| | - Sara Sullivan
- Species Conservation Toolkit Initiative, Chicago Zoological Society, Brookfield, IL, USA
| | - Stephanie Mitchell
- Center for Species Survival, Smithsonian National Zoological Park and Conservation Biology Institute, Washington, DC, USA
| | | | | | | | - Chantal Shalukoma
- Institut Congolais Pour La Conservation de Nature, Kinshasa, Democratic Republic of Congo
| | | | - Pranav S Pandit
- EpiCenter for Disease Dynamics, One Health Institute, School of Veterinary Medicine, University of California Davis, Davis, CA, USA
| | | | - Taylor Callicrate
- Species Conservation Toolkit Initiative, Chicago Zoological Society, Brookfield, IL, USA
| | - Philip Miller
- IUCN SSC Conservation Planning Specialist Group US, Apple Valley, MN, USA
| | - Kirsten Gilardi
- Gorilla Doctors (MGVP, Inc.), Davis, CA, USA
- School of Veterinary Medicine, Karen C. Drayer Wildlife Health Center, University of California, Davis, CA, USA
| | - Robert C Lacy
- Species Conservation Toolkit Initiative, Chicago Zoological Society, Brookfield, IL, USA
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2
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Robbins AM, Manguette ML, Breuer T, Groenenberg M, Parnell RJ, Stephan C, Stokes EJ, Robbins MM. Population dynamics of western gorillas at Mbeli Bai. PLoS One 2022; 17:e0275635. [PMID: 36260834 PMCID: PMC9581538 DOI: 10.1371/journal.pone.0275635] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/14/2022] [Accepted: 09/20/2022] [Indexed: 11/19/2022] Open
Abstract
Long-term studies of population dynamics can provide insights into life history theory, population ecology, socioecology, conservation biology and wildlife management. Here we examine 25 years of population dynamics of western gorillas at Mbeli Bai, a swampy forest clearing in Nouabalé-Ndoki National Park, the Republic of Congo. The Mbeli population more than doubled from 101 to 226 gorillas during the study. After adjusting for a net influx of gorillas into the study population, the increase represents an inherent growth rate of 0.7% per year, with 95% confidence limits between -0.7% and 2.6%. The influx of gorillas mainly involved immigration of individuals into existing study groups (social dispersal), but it also included the appearance of a few previously unknown groups (locational dispersal). The average group size did not change significantly during the study, which is consistent with the possibility that western gorillas face socioecological constraints on group size, even when the population is increasing. We found no significant evidence of density dependence on female reproductive success or male mating competition. The distribution of gorillas among age/sex categories also did not change significantly, which suggests that the population had a stable age structure. Our results provide evidence of population stability or growth for some western gorillas (albeit within a small area). The results highlight the value of law enforcement, long-term monitoring, and protected areas; but they do not diminish the importance of improving conservation for this critically endangered species.
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Affiliation(s)
- Andrew M. Robbins
- Wildlife Conservation Society–Congo Program, Brazzaville, Republic of Congo
- * E-mail:
| | - Marie L. Manguette
- Wildlife Conservation Society–Congo Program, Brazzaville, Republic of Congo
- Nouabalé-Ndoki Foundation, Brazzaville, Republic of Congo
| | - Thomas Breuer
- Nouabalé-Ndoki Foundation, Brazzaville, Republic of Congo
- Division of Developmental Biology, Friedrich-Alexander University Erlangen, Erlangen, Germany
| | | | - Richard J. Parnell
- Wildlife Conservation Society, Global Conservation Program, Bronx, NY, United States of America
| | - Claudia Stephan
- Wildlife Conservation Society–Congo Program, Brazzaville, Republic of Congo
- Nouabalé-Ndoki Foundation, Brazzaville, Republic of Congo
- Division of Developmental Biology, Friedrich-Alexander University Erlangen, Erlangen, Germany
| | - Emma J. Stokes
- Wildlife Conservation Society, Global Conservation Program, Bronx, NY, United States of America
| | - Martha M. Robbins
- Wildlife Conservation Society–Congo Program, Brazzaville, Republic of Congo
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3
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Szott EA, Brightwell K, Gibson Q. Assessment of social mixing and spatial overlap as a pathway for disease transmission in a northeast Florida estuarine dolphin community. Mamm Biol 2022. [DOI: 10.1007/s42991-022-00282-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/14/2022]
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4
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Clements SJ, Zhao Q, Silk MJ, Hodgson DJ, Weegman MD. Modelling associations between animal social structure and demography. Anim Behav 2022. [DOI: 10.1016/j.anbehav.2022.03.017] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/01/2022]
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5
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Hayman DTS, Sam John R, Rohani P. Transmission models indicate Ebola virus persistence in non-human primate populations is unlikely. J R Soc Interface 2022; 19:20210638. [PMID: 35104430 PMCID: PMC8820502 DOI: 10.1098/rsif.2021.0638] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022] Open
Abstract
Infectious diseases that kill their hosts may persist locally only if transmission is appropriately balanced by susceptible recruitment. Great apes die of Ebola virus disease (EVD) and have transmitted ebolaviruses to people. However, understanding the role that apes and other non-human primates play in maintaining ebolaviruses in Nature is hampered by a lack of data. Recent serological findings suggest that few non-human primates have antibodies to EVD-causing viruses throughout tropical Africa, suggesting low transmission rates and/or high EVD mortality (Ayouba A et al. 2019 J. Infect. Dis. 220, 1599-1608 (doi:10.1093/infdis/jiz006); Mombo IM et al. 2020 Viruses 12, 1347 (doi:10.3390/v12121347)). Here, stochastic transmission models of EVD in non-human primates assuming high case-fatality probabilities and experimentally observed or field-observed parameters did not allow viral persistence, suggesting that non-human primate populations are highly unlikely to sustain EVD-causing infection for prolonged periods. Repeated introductions led to declining population sizes, similar to field observations of apes, but not viral persistence.
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Affiliation(s)
- David T S Hayman
- Molecular Epidemiology and Public Health Laboratory, Hopkirk Research Institute, School of Veterinary Science, Massey University, Private Bag 11 222, Palmerston North 4442, New Zealand.,Te Pūnaha Matatini, Centre for Research Excellence, Auckland, New Zealand
| | - Reju Sam John
- Molecular Epidemiology and Public Health Laboratory, Hopkirk Research Institute, School of Veterinary Science, Massey University, Private Bag 11 222, Palmerston North 4442, New Zealand
| | - Pejman Rohani
- Odum School of Ecology, University of Georgia, Athens, GA 30602, USA.,Center for Influenza Disease & Emergence Research, University of Georgia, Athens, GA 30602, USA.,Department of Infectious Diseases, College of Veterinary Medicine, University of Georgia, Athens, GA 30602, USA
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6
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Fontsere C, Frandsen P, Hernandez-Rodriguez J, Niemann J, Scharff-Olsen CH, Vallet D, Le Gouar P, Ménard N, Navarro A, Siegismund HR, Hvilsom C, Gilbert MTP, Kuhlwilm M, Hughes D, Marques-Bonet T. The genetic impact of an Ebola outbreak on a wild gorilla population. BMC Genomics 2021; 22:735. [PMID: 34635054 PMCID: PMC8504571 DOI: 10.1186/s12864-021-08025-y] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2021] [Accepted: 09/13/2021] [Indexed: 11/10/2022] Open
Abstract
Background Numerous Ebola virus outbreaks have occurred in Equatorial Africa over the past decades. Besides human fatalities, gorillas and chimpanzees have also succumbed to the fatal virus. The 2004 outbreak at the Odzala-Kokoua National Park (Republic of Congo) alone caused a severe decline in the resident western lowland gorilla (Gorilla gorilla gorilla) population, with a 95% mortality rate. Here, we explore the immediate genetic impact of the Ebola outbreak in the western lowland gorilla population. Results Associations with survivorship were evaluated by utilizing DNA obtained from fecal samples from 16 gorilla individuals declared missing after the outbreak (non-survivors) and 15 individuals observed before and after the epidemic (survivors). We used a target enrichment approach to capture the sequences of 123 genes previously associated with immunology and Ebola virus resistance and additionally analyzed the gut microbiome which could influence the survival after an infection. Our results indicate no changes in the population genetic diversity before and after the Ebola outbreak, and no significant differences in microbial community composition between survivors and non-survivors. However, and despite the low power for an association analysis, we do detect six nominally significant missense mutations in four genes that might be candidate variants associated with an increased chance of survival. Conclusion This study offers the first insight to the genetics of a wild great ape population before and after an Ebola outbreak using target capture experiments from fecal samples, and presents a list of candidate loci that may have facilitated their survival. Supplementary Information The online version contains supplementary material available at 10.1186/s12864-021-08025-y.
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Affiliation(s)
- Claudia Fontsere
- Institut de Biologia Evolutiva, (CSIC-Universitat Pompeu Fabra), PRBB, Doctor Aiguader 88, 08003, Barcelona, Catalonia, Spain.
| | - Peter Frandsen
- Research and Conservation, Copenhagen Zoo, 2000, Frederiksberg, Denmark.,Department of Biology, Section for Computational and RNA Biology, University of Copenhagen, Ole Maaløes Vej 5, 2200, Copenhagen, Denmark
| | - Jessica Hernandez-Rodriguez
- Institut de Biologia Evolutiva, (CSIC-Universitat Pompeu Fabra), PRBB, Doctor Aiguader 88, 08003, Barcelona, Catalonia, Spain.,Genomics of Health Research Group, Hospital Universitari Son Espases (HUSE) and Institut d'Investigacions Sanitaries de Balears (IDISBA), Palma, Spain
| | - Jonas Niemann
- Center for Evolutionary Hologenomics, The GLOBE Institute, University of Copenhagen, 1353, Copenhagen, Denmark
| | | | - Dominique Vallet
- UMR 6553, ECOBIO: Ecosystems, Biodiversity, Evolution, CNRS/University of Rennes 1, Station Biologique de Paimpont, 35380, Paimpont, France
| | - Pascaline Le Gouar
- UMR 6553, ECOBIO: Ecosystems, Biodiversity, Evolution, CNRS/University of Rennes 1, Station Biologique de Paimpont, 35380, Paimpont, France
| | - Nelly Ménard
- UMR 6553, ECOBIO: Ecosystems, Biodiversity, Evolution, CNRS/University of Rennes 1, Station Biologique de Paimpont, 35380, Paimpont, France
| | - Arcadi Navarro
- Institut de Biologia Evolutiva, (CSIC-Universitat Pompeu Fabra), PRBB, Doctor Aiguader 88, 08003, Barcelona, Catalonia, Spain.,Institucio Catalana de Recerca i Estudis Avançats (ICREA, 08010, Barcelona, Catalonia, Spain.,CRG, Centre for Genomic Regulation, Barcelona Institute of Science and Technology (BIST), 08036, Barcelona, Spain.,BarcelonaBeta Brain Research Center, Pasqual Maragall Foundation, 08005, Barcelona, Spain
| | - Hans R Siegismund
- Department of Biology, Section for Computational and RNA Biology, University of Copenhagen, Ole Maaløes Vej 5, 2200, Copenhagen, Denmark
| | - Christina Hvilsom
- Research and Conservation, Copenhagen Zoo, 2000, Frederiksberg, Denmark
| | - M Thomas P Gilbert
- Center for Evolutionary Hologenomics, The GLOBE Institute, University of Copenhagen, 1353, Copenhagen, Denmark.,University Museum, NTNU, Trondheim, Norway
| | - Martin Kuhlwilm
- Institut de Biologia Evolutiva, (CSIC-Universitat Pompeu Fabra), PRBB, Doctor Aiguader 88, 08003, Barcelona, Catalonia, Spain. .,Department of Evolutionary Anthropology, University of Vienna, Djerassiplatz 1, 1030, Vienna, Austria.
| | - David Hughes
- Institut de Biologia Evolutiva, (CSIC-Universitat Pompeu Fabra), PRBB, Doctor Aiguader 88, 08003, Barcelona, Catalonia, Spain.,Population Health Sciences, Bristol Medical School, University of Bristol, Bristol, UK.,MRC Integrative Epidemiology Unit at University of Bristol, Bristol, UK
| | - Tomas Marques-Bonet
- Institut de Biologia Evolutiva, (CSIC-Universitat Pompeu Fabra), PRBB, Doctor Aiguader 88, 08003, Barcelona, Catalonia, Spain. .,Institucio Catalana de Recerca i Estudis Avançats (ICREA, 08010, Barcelona, Catalonia, Spain. .,CNAG-CRG, Centre for Genomic Regulation (CRG), Barcelona Institute of Science and Technology (BIST), Baldiri i Reixac 4, 08028, Barcelona, Spain. .,Institut Català de Paleontologia Miquel Crusafont, Universitat Autònoma de Barcelona, Edifici ICTA-ICP, c/ Columnes s/n, 08193 Cerdanyola del Vallès, Barcelona, Spain.
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7
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Newcastle disease virus transmission dynamics in wild peridomestic birds in the United Arab Emirates. Sci Rep 2021; 11:3491. [PMID: 33568682 PMCID: PMC7876026 DOI: 10.1038/s41598-020-79184-3] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/03/2020] [Accepted: 11/11/2020] [Indexed: 11/15/2022] Open
Abstract
To understand the dynamics of a pathogen in an animal population, one must assess how the infection status of individuals changes over time. With wild animals, this can be very challenging because individuals can be difficult to trap and sample, even more so since they are tested with imperfect diagnostic techniques. Multi-event capture-recapture models allow analysing longitudinal capture data of individuals whose infection status is assessed using imperfect tests. In this study, we used a two-year dataset from a longitudinal field study of peridomestic wild bird populations in the United Arab Emirates during which thousands of birds from various species were captured, sampled and tested for Newcastle disease virus exposure using a serological test. We developed a multi-event capture-recapture model to estimate important demographic and epidemiological parameters of the disease. The modelling outputs provided important insights into the understanding of Newcastle disease dynamics in peridomestics birds, which varies according to ecological and epidemiological parameters, and useful information in terms of surveillance strategies. To our knowledge, this study is the first attempt to model the dynamics of Newcastle disease in wild bird populations by combining longitudinal capture data and serological test results. Overall, it showcased that multi-event capture-recapture models represent a suitable method to analyse imperfect capture data and make reliable inferences on infectious disease dynamics in wild populations.
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8
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Genovart M, Gimenez O, Bertolero A, Choquet R, Oro D, Pradel R. Decrease in social cohesion in a colonial seabird under a perturbation regime. Sci Rep 2020; 10:18720. [PMID: 33127979 PMCID: PMC7603481 DOI: 10.1038/s41598-020-75259-3] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/27/2020] [Accepted: 09/14/2020] [Indexed: 11/29/2022] Open
Abstract
Social interactions, through influence on behavioural processes, can play an important role in populations’ resilience (i.e. ability to cope with perturbations). However little is known about the effects of perturbations on the strength of social cohesion in wild populations. Long-term associations between individuals may reflect the existence of social cohesion for seizing the evolutionary advantages of social living. We explore the existence of social cohesion and its dynamics under perturbations by analysing long-term social associations, in a colonial seabird, the Audouin’s gull Larus audouinii, living in a site experiencing a shift to a perturbed regime. Our goals were namely (1) to uncover the occurrence of long-term social ties (i.e. associations) between individuals and (2) to examine whether the perturbation regime affected this form of social cohesion. We analysed a dataset of more than 3500 individuals from 25 years of monitoring by means of contingency tables and within the Social Network Analysis framework. We showed that associations between individuals are not only due to philopatry or random gregariousness but that there are social ties between individuals over the years. Furthermore, social cohesion decreased under the perturbation regime. We sustain that perturbations may lead not only to changes in individuals’ behaviour and fitness but also to a change in populations’ social cohesion. The consequences of decreasing social cohesion are still not well understood, but they can be critical for the population dynamics of social species.
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Affiliation(s)
- M Genovart
- CEAB (CSIC), Accés Cala Sant Francesc 14, 17300, Blanes, Spain. .,IMEDEA (CSIC-UIB), Miquel Marquès 21, 07190, Esporles, Spain.
| | - O Gimenez
- CEFE, CNRS, Univ. Montpellier, Univ. Paul Valéry Montpellier 3, EPHE, IRD, 34293, Montpellier, France
| | - A Bertolero
- Associació Ornitològica Picampall de les Terres de l'Ebre, 43580, Deltebre, Spain
| | - R Choquet
- CEFE, CNRS, Univ. Montpellier, Univ. Paul Valéry Montpellier 3, EPHE, IRD, 34293, Montpellier, France
| | - D Oro
- CEAB (CSIC), Accés Cala Sant Francesc 14, 17300, Blanes, Spain.,IMEDEA (CSIC-UIB), Miquel Marquès 21, 07190, Esporles, Spain
| | - R Pradel
- CEFE, CNRS, Univ. Montpellier, Univ. Paul Valéry Montpellier 3, EPHE, IRD, 34293, Montpellier, France
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9
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Hagemann L, Arandjelovic M, Robbins MM, Deschner T, Lewis M, Froese G, Boesch C, Vigilant L. Long-term inference of population size and habitat use in a socially dynamic population of wild western lowland gorillas. CONSERV GENET 2019. [DOI: 10.1007/s10592-019-01209-w] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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10
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Millon A, Lambin X, Devillard S, Schaub M. Quantifying the contribution of immigration to population dynamics: a review of methods, evidence and perspectives in birds and mammals. Biol Rev Camb Philos Soc 2019; 94:2049-2067. [DOI: 10.1111/brv.12549] [Citation(s) in RCA: 22] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/10/2019] [Revised: 07/10/2019] [Accepted: 07/17/2019] [Indexed: 02/04/2023]
Affiliation(s)
- Alexandre Millon
- Aix Marseille Université, CNRS, IRD, Avignon Université, IMBE, Institut Méditerranéen de Biodiversité et d'Ecologie marine et continentale, Technopôle Arbois‐Méditerranée, Bât. Villemin – BP 80 F‐13545 Aix‐en‐Provence cedex 04 France
| | - Xavier Lambin
- School of Biological SciencesUniversity of Aberdeen Tillydrone Avenue, Zoology Building, University of Aberdeen, AB24 2TZ Aberdeen U.K
| | - Sébastien Devillard
- Université de Lyon, Université Claude Bernard Lyon 1, CNRS, Laboratoire de Biométrie et Biologie Evolutive F‐69100 Villeurbanne France
| | - Michael Schaub
- Swiss Ornithological Institute Seerose 1, 6204 Sempach Switzerland
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11
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Robbins MM, Robbins AM. Variation in the social organization of gorillas: Life history and socioecological perspectives. Evol Anthropol 2018; 27:218-233. [PMID: 30325554 DOI: 10.1002/evan.21721] [Citation(s) in RCA: 40] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/01/2018] [Revised: 07/18/2018] [Accepted: 08/06/2018] [Indexed: 01/29/2023]
Abstract
A focus of socioecological research is to understand how ecological, social, and life history factors influence the variability of social organization within and between species. The genus Gorilla exhibits variability in social organization with western gorilla groups being almost exclusively one-male, yet approximately 40% of mountain gorilla groups are multimale. We review five ultimate causes for the variability in social organization within and among gorilla populations: human disturbance, ecological constraints on group size, risk of infanticide, life history patterns, and population density. We find the most evidence for the ecological constraints and life history hypotheses, but an over-riding explanation remains elusive. The variability may hinge on variation in female dispersal patterns, as females seek a group of optimal size and with a good protector male. Our review illustrates the challenges of understanding why the social organization of closely related species may deviate from predictions based on socioecological and life history theory.
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Affiliation(s)
- Martha M Robbins
- Max Planck Institute for Evolutionary Anthropology, Leipzig, Germany
| | - Andrew M Robbins
- Max Planck Institute for Evolutionary Anthropology, Leipzig, Germany
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12
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Social tipping points in animal societies in response to heat stress. Nat Ecol Evol 2018; 2:1298-1305. [PMID: 29942021 DOI: 10.1038/s41559-018-0592-5] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/24/2018] [Accepted: 05/25/2018] [Indexed: 11/08/2022]
Abstract
Living systems sometimes experience abrupt tipping points in response to stress. Here we investigate the factors contributing to the appearance of such abrupt state transitions in animal societies. We first construct a mathematical account of how the personality compositions of societies could alter their propensity to shift from calm to violent states in response to thermal stress. To evaluate our model, we subjected experimental societies of the spider Anelosimus studiosus to heat stress. We demonstrate that both colony size and personality composition influence the timing of and recoverability from sudden transitions in social state. Groups composed of aggressive personalities transitioned into violent within-group dynamics sooner during heating, and also resisted recovery to baseline non-aggressive behaviour during cooling. We further observed hysteresis in groups composed of aggressive individuals, where group behaviour depended strongly on whether the colony had previously been in a calm or agitated state. These results demonstrate that a society's susceptibility to sudden state shifts and their recoverability from them can be driven by the personalities of their constituents.
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13
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Marescot L, Benhaiem S, Gimenez O, Hofer H, Lebreton J, Olarte‐Castillo XA, Kramer‐Schadt S, East ML. Social status mediates the fitness costs of infection with canine distemper virus in Serengeti spotted hyenas. Funct Ecol 2018; 32:1237-1250. [PMID: 32313354 PMCID: PMC7163977 DOI: 10.1111/1365-2435.13059] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/09/2016] [Accepted: 01/26/2018] [Indexed: 02/06/2023]
Abstract
The extent to which the fitness costs of infection are mediated by key life-history traits such as age or social status is still unclear. Within populations, individual heterogeneity in the outcome of infection is the result of two successive processes; the degree of contact with the pathogen (exposure) and the immune response to infection. In social mammals, because individuals holding high social status typically interact more frequently with group members, they should be more often in contact with infected individuals than those of low social status. However, when access to resources is determined by social status, individuals with a high social status are often better nourished, have a greater opportunity to allocate resources to immune processes and therefore should have a smaller chance of succumbing to infection than individuals with low social status.We investigated the risk and fitness costs of infection during a virulent epidemic of canine distemper virus (CDV) in a social carnivore, the spotted hyena, in the Serengeti National Park. We analysed two decades of detailed life-history data from 625 females and 816 males using a multi-event capture-mark-recapture model that accounts for uncertainty in the assignment of individual infection states.Cubs of mothers with a high social status had a lower probability of CDV infection and were more likely to survive infection than those with low social status. Subadult and adult females with high social status had a higher infection probability than those with low social status. Subadult females and pre-breeder males that had recovered from CDV infection had a lower survival than susceptible ones.Our study disentangles the relative importance of individual exposure and resource allocation to immune processes, demonstrates fitness costs of infection for juveniles, particularly for those with low social status, shows that patterns of infection can be driven by different mechanisms among juveniles and adults and establishes a negative relationship between infection and fitness in a free-ranging mammal. A http://onlinelibrary.wiley.com/doi/10.1111/1365-2435.13059/suppinfo is available for this article.
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Affiliation(s)
- Lucile Marescot
- Department of Ecological DynamicsLeibniz Institute for Zoo and Wildlife ResearchBerlinGermany
| | - Sarah Benhaiem
- Department of Ecological DynamicsLeibniz Institute for Zoo and Wildlife ResearchBerlinGermany
| | - Olivier Gimenez
- CEFEUMR 5175CNRSUniversité de MontpellierUniversité Paul‐Valéry MontpellierEPHEMontpellier Cedex 5France
| | - Heribert Hofer
- Department of Ecological DynamicsLeibniz Institute for Zoo and Wildlife ResearchBerlinGermany
- Department of Veterinary MedicineFreie Universität BerlinBerlinGermany
- Department of Biology, Chemistry, PharmacyFreie Universität BerlinBerlinGermany
| | - Jean‐Dominique Lebreton
- CEFEUMR 5175CNRSUniversité de MontpellierUniversité Paul‐Valéry MontpellierEPHEMontpellier Cedex 5France
| | | | - Stephanie Kramer‐Schadt
- Department of Ecological DynamicsLeibniz Institute for Zoo and Wildlife ResearchBerlinGermany
| | - Marion L. East
- Department of Ecological DynamicsLeibniz Institute for Zoo and Wildlife ResearchBerlinGermany
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14
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Breuer T, Manguette M, Groenenberg M. Gorilla
Gorilla
spp conservation – from zoos to the field and back: examples from the Mbeli Bai Study. ACTA ACUST UNITED AC 2018. [DOI: 10.1111/izy.12181] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Affiliation(s)
- T. Breuer
- Global Conservation Program Wildlife Conservation Society 2300 Southern Boulevard Bronx New York 10460 USA
| | - M. Manguette
- Department of Primatology Max Planck Institute for Evolutionary Anthropology Deutscher Platz 6 04103 Leipzig Germany
- Mbeli Bai Study Nouabalé‐Ndoki National Park Wildlife Conservation Society B.P. 14537 Brazzaville Congo
| | - M. Groenenberg
- Mbeli Bai Study Nouabalé‐Ndoki National Park Wildlife Conservation Society B.P. 14537 Brazzaville Congo
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15
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Faust CL, McCallum HI, Bloomfield LSP, Gottdenker NL, Gillespie TR, Torney CJ, Dobson AP, Plowright RK. Pathogen spillover during land conversion. Ecol Lett 2018; 21:471-483. [DOI: 10.1111/ele.12904] [Citation(s) in RCA: 117] [Impact Index Per Article: 19.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/27/2017] [Accepted: 12/04/2017] [Indexed: 12/19/2022]
Affiliation(s)
- Christina L. Faust
- Department of Microbiology and Immunology; Montana State University; Montana MT USA
- Department of Ecology and Evolutionary Biology; Princeton University; Princeton NJ USA
- Institute of Biodiversity, Animal Health and Comparative Medicine; Universtiy of Glasgow; Glasgow UK
| | - Hamish I. McCallum
- Environmental Futures Research Institute and Griffith School of Environment; Griffith University; Griffith Qld. Australia
| | - Laura S. P. Bloomfield
- Emmett Interdisciplinary Program in Environment and Resources; Stanford University; Stanford CA USA
| | - Nicole L. Gottdenker
- Department of Veterinary Pathology; College of Veterinary Medicine; University of Georgia; Athens GA USA
| | - Thomas R. Gillespie
- Department of Environmental Sciences; Department of Environmental Health; Rollins School of Public Health; Program In Population; Biology, Ecology and Evolution; Emory University; Athens GA USA
| | - Colin J. Torney
- School of Mathematics and Statistics; University of Glasgow; Glasgow UK
| | - Andrew P. Dobson
- Department of Ecology and Evolutionary Biology; Princeton University; Princeton NJ USA
| | - Raina K. Plowright
- Department of Microbiology and Immunology; Montana State University; Montana MT USA
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16
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Hoenig JM, Groner ML, Smith MW, Vogelbein WK, Taylor DM, Landers DF, Swenarton JT, Gauthier DT, Sadler P, Matsche MA, Haines AN, Small HJ, Pradel R, Choquet R, Shields JD. Impact of disease on the survival of three commercially fished species. ECOLOGICAL APPLICATIONS : A PUBLICATION OF THE ECOLOGICAL SOCIETY OF AMERICA 2017; 27:2116-2127. [PMID: 28675580 DOI: 10.1002/eap.1595] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/14/2017] [Revised: 06/01/2017] [Accepted: 06/07/2017] [Indexed: 06/07/2023]
Abstract
Recent increases in emergent infectious diseases have raised concerns about the sustainability of some marine species. The complexity and expense of studying diseases in marine systems often dictate that conservation and management decisions are made without quantitative data on population-level impacts of disease. Mark-recapture is a powerful, underutilized, tool for calculating impacts of disease on population size and structure, even in the absence of etiological information. We applied logistic regression models to mark-recapture data to obtain estimates of disease-associated mortality rates in three commercially important marine species: snow crab (Chionoecetes opilio) in Newfoundland, Canada, that experience sporadic epizootics of bitter crab disease; striped bass (Morone saxatilis) in the Chesapeake Bay, USA, that experience chronic dermal and visceral mycobacteriosis; and American lobster (Homarus americanus) in the Southern New England stock, that experience chronic epizootic shell disease. All three diseases decreased survival of diseased hosts. Survival of diseased adult male crabs was 1% (0.003-0.022, 95% CI) that of uninfected crabs indicating nearly complete mortality of infected crabs in this life stage. Survival of moderately and severely diseased striped bass (which comprised 15% and 11% of the population, respectively) was 84% (70-100%, 95% CI), and 54% (42-68%, 95% CI) that of healthy striped bass. The disease-adjusted yearly natural mortality rate for striped bass was 0.29, nearly double the previously accepted value, which did not include disease. Survival of moderately and severely diseased lobsters was 30% (15-60%, 95% CI) that of healthy lobsters and survival of mildly diseased lobsters was 45% (27-75%, 95% CI) that of healthy lobsters. High disease mortality in ovigerous females may explain the poor recruitment and rapid declines observed in this population. Stock assessments should account for disease-related mortality when resource management options are evaluated.
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Affiliation(s)
- John M Hoenig
- Virginia Institute of Marine Science, College of William & Mary, P.O. Box 1346, Gloucester Point, Virginia, 23062, USA
| | - Maya L Groner
- Virginia Institute of Marine Science, College of William & Mary, P.O. Box 1346, Gloucester Point, Virginia, 23062, USA
| | - Matthew W Smith
- Virginia Institute of Marine Science, College of William & Mary, P.O. Box 1346, Gloucester Point, Virginia, 23062, USA
| | - Wolfgang K Vogelbein
- Virginia Institute of Marine Science, College of William & Mary, P.O. Box 1346, Gloucester Point, Virginia, 23062, USA
| | - David M Taylor
- Science Branch, Department of Fisheries and Oceans, P.O. Box 5667, St. John's, Newfoundland and Labrador, A1C 5X1, Canada
| | - Donald F Landers
- Millstone Power Station Environmental Laboratory, Dominion, Rope Ferry Road, Waterford, Connecticut, 06385, USA
| | - John T Swenarton
- Millstone Power Station Environmental Laboratory, Dominion, Rope Ferry Road, Waterford, Connecticut, 06385, USA
| | - David T Gauthier
- Virginia Institute of Marine Science, College of William & Mary, P.O. Box 1346, Gloucester Point, Virginia, 23062, USA
| | - Philip Sadler
- Virginia Institute of Marine Science, College of William & Mary, P.O. Box 1346, Gloucester Point, Virginia, 23062, USA
| | - Mark A Matsche
- Maryland Department of Natural Resources, Cooperative Oxford Laboratory, 904 South Morris Street, Oxford, Maryland, 21654, USA
| | - Ashley N Haines
- Virginia Institute of Marine Science, College of William & Mary, P.O. Box 1346, Gloucester Point, Virginia, 23062, USA
| | - Hamish J Small
- Virginia Institute of Marine Science, College of William & Mary, P.O. Box 1346, Gloucester Point, Virginia, 23062, USA
| | - Roger Pradel
- CEFE UMR 5175, CNRS, Université Montpellier, Université P. Valéry, EPHE, 1919 route de Mende, 34293, Montpellier Cedex 5, France
| | - Rémi Choquet
- CEFE UMR 5175, CNRS, Université Montpellier, Université P. Valéry, EPHE, 1919 route de Mende, 34293, Montpellier Cedex 5, France
| | - Jeffrey D Shields
- Virginia Institute of Marine Science, College of William & Mary, P.O. Box 1346, Gloucester Point, Virginia, 23062, USA
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17
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Genton C, Cristescu R, Gatti S, Levréro F, Bigot E, Motsch P, Le Gouar P, Pierre JS, Ménard N. Using demographic characteristics of populations to detect spatial fragmentation following suspected ebola outbreaks in great apes. AMERICAN JOURNAL OF PHYSICAL ANTHROPOLOGY 2017; 164:3-10. [DOI: 10.1002/ajpa.23275] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/15/2016] [Revised: 06/04/2017] [Accepted: 06/15/2017] [Indexed: 11/06/2022]
Affiliation(s)
- Céline Genton
- UMR 6553, ECOBIO-Ecosystems, Biodiversity, Evolution, CNRS/University of Rennes 1, Biological Station of Paimpont; Paimpont France
| | - Romane Cristescu
- GeneCology Research Centre; Faculty of Science, Health, Education and Engineering, University of the Sunshine Coast; Sippy Downs QLD Australia
| | - Sylvain Gatti
- UMR 6553, ECOBIO-Ecosystems, Biodiversity, Evolution, CNRS/University of Rennes 1, Biological Station of Paimpont; Paimpont France
| | - Florence Levréro
- Université de Saint-Etienne/Lyon, Equipe de Neuro-Ethologie Sensorielle, Neuro-PSI, CNRS UMR 9197; Saint-Etienne France
| | - Elodie Bigot
- UMR 6553, ECOBIO-Ecosystems, Biodiversity, Evolution, CNRS/University of Rennes 1, Biological Station of Paimpont; Paimpont France
| | - Peggy Motsch
- UMR 6553, ECOBIO-Ecosystems, Biodiversity, Evolution, CNRS/University of Rennes 1, Biological Station of Paimpont; Paimpont France
| | - Pascaline Le Gouar
- UMR 6553, ECOBIO-Ecosystems, Biodiversity, Evolution, CNRS/University of Rennes 1, Biological Station of Paimpont; Paimpont France
| | - Jean-Sébastien Pierre
- UMR 6553, ECOBIO-Ecosystems, Biodiversity, Evolution, CNRS/University of Rennes 1; Rennes France
| | - Nelly Ménard
- UMR 6553, ECOBIO-Ecosystems, Biodiversity, Evolution, CNRS/University of Rennes 1, Biological Station of Paimpont; Paimpont France
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18
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Leendertz SAJ, Wich SA, Ancrenaz M, Bergl RA, Gonder MK, Humle T, Leendertz FH. Ebola in great apes - current knowledge, possibilities for vaccination, and implications for conservation and human health. Mamm Rev 2016. [DOI: 10.1111/mam.12082] [Citation(s) in RCA: 35] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Siv Aina J. Leendertz
- Great Apes Survival Partnership (GRASP); United Nations Environment Programme; P.O. Box 30552 Nairobi Kenya
- Research Group Epidemiology of Highly Pathogenic Microorganisms; Robert Koch-Institute; Seestrasse 10 13353 Berlin Germany
| | - Serge A. Wich
- Liverpool John Moore's University; 70 Mount Pleasant; Liverpool L3 5UA Merseyside UK
| | - Marc Ancrenaz
- Borneo Futures; Taman Kinanty, Lorong Angsa 12, House 61D 88300 Kota Kinabalu Sabah Malaysia
| | - Richard A. Bergl
- North Carolina Zoo; 4401 Zoo Parkway Asheboro North Carolina USA
| | - Mary K. Gonder
- Department of Biology; Drexel University; 3245 Chestnut Street Philadelphia PA 19104 USA
| | - Tatyana Humle
- Durrell Institute of Conservation and Ecology; School of Anthropology and Conservation; University of Kent; Canterbury CT2 7NR UK
| | - Fabian H. Leendertz
- Research Group Epidemiology of Highly Pathogenic Microorganisms; Robert Koch-Institute; Seestrasse 10 13353 Berlin Germany
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19
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Folayan MO, Haire BG, Brown B. Critical role of ethics in clinical management and public health response to the West Africa Ebola epidemic. Risk Manag Healthc Policy 2016; 9:55-65. [PMID: 27274326 PMCID: PMC4869630 DOI: 10.2147/rmhp.s83907] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022] Open
Abstract
The devastation caused by the Ebola virus disease (EVD) outbreak in West Africa has brought to the fore a number of important ethical debates about how best to respond to a health crisis. These debates include issues related to prevention and containment, management of the health care workforce, clinical care, and research design, all of which are situated within the overarching moral problem of severe transnational disadvantage, which has very real and specific impacts upon the ability of citizens of EVD-affected countries to respond to a disease outbreak. Ethical issues related to prevention and containment include the appropriateness and scope of quarantine and isolation within and outside affected countries. The possibility of infection in health care workers impelled consideration of whether there is an obligation to provide health services where personal protection equipment is inadequate, alongside the issue of whether the health care workforce should have special access to experimental treatment and care interventions under development. In clinical care, ethical issues include the standards of care owed to people who comply with quarantine and isolation restrictions. Ethical issues in research include appropriate study design related to experimental vaccines and treatment interventions, and the sharing of data and biospecimens between research groups. The compassionate use of experimental drugs intersects both with research ethics and clinical care. The role of developed countries also came under scrutiny, and we concluded that developed countries have an obligation to contribute to the containment of EVD infection by contributing to the strengthening of local health care systems and infrastructure in an effort to provide fair benefits to communities engaged in research, ensuring that affected countries have ready and affordable access to any therapeutic or preventative interventions developed, and supporting affected countries on their way to recovery from the impact of EVD on their social and economic lives.
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Affiliation(s)
- Morenike O Folayan
- Institute of Public Health, Obafemi Awolowo University, Ile-Ife, Nigeria
- Department of Child Dental Health, Obafemi Awolowo University, Ile-Ife, Nigeria
| | - Bridget G Haire
- Kirby Institute for Infection and Immunity in Society, University of New South Wales, Sydney, NSW, Australia
| | - Brandon Brown
- Center for Healthy Communities, Department of Social Medicine and Population Health, University of California Riverside School of Medicine, Riverside, CA, USA
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20
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Tomaszkiewicz M, Rangavittal S, Cechova M, Campos Sanchez R, Fescemyer HW, Harris R, Ye D, O'Brien PCM, Chikhi R, Ryder OA, Ferguson-Smith MA, Medvedev P, Makova KD. A time- and cost-effective strategy to sequence mammalian Y Chromosomes: an application to the de novo assembly of gorilla Y. Genome Res 2016; 26:530-40. [PMID: 26934921 PMCID: PMC4817776 DOI: 10.1101/gr.199448.115] [Citation(s) in RCA: 77] [Impact Index Per Article: 9.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/11/2015] [Accepted: 01/21/2016] [Indexed: 01/25/2023]
Abstract
The mammalian Y Chromosome sequence, critical for studying male fertility and dispersal, is enriched in repeats and palindromes, and thus, is the most difficult component of the genome to assemble. Previously, expensive and labor-intensive BAC-based techniques were used to sequence the Y for a handful of mammalian species. Here, we present a much faster and more affordable strategy for sequencing and assembling mammalian Y Chromosomes of sufficient quality for most comparative genomics analyses and for conservation genetics applications. The strategy combines flow sorting, short- and long-read genome and transcriptome sequencing, and droplet digital PCR with novel and existing computational methods. It can be used to reconstruct sex chromosomes in a heterogametic sex of any species. We applied our strategy to produce a draft of the gorilla Y sequence. The resulting assembly allowed us to refine gene content, evaluate copy number of ampliconic gene families, locate species-specific palindromes, examine the repetitive element content, and produce sequence alignments with human and chimpanzee Y Chromosomes. Our results inform the evolution of the hominine (human, chimpanzee, and gorilla) Y Chromosomes. Surprisingly, we found the gorilla Y Chromosome to be similar to the human Y Chromosome, but not to the chimpanzee Y Chromosome. Moreover, we have utilized the assembled gorilla Y Chromosome sequence to design genetic markers for studying the male-specific dispersal of this endangered species.
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Affiliation(s)
- Marta Tomaszkiewicz
- Department of Biology, Pennsylvania State University, University Park, Pennsylvania 16802, USA
| | - Samarth Rangavittal
- Department of Biology, Pennsylvania State University, University Park, Pennsylvania 16802, USA
| | - Monika Cechova
- Department of Biology, Pennsylvania State University, University Park, Pennsylvania 16802, USA
| | - Rebeca Campos Sanchez
- Genetics Program, The Huck Institutes of the Life Sciences, Pennsylvania State University, University Park, Pennsylvania 16802, USA
| | - Howard W Fescemyer
- Department of Biology, Pennsylvania State University, University Park, Pennsylvania 16802, USA
| | - Robert Harris
- Department of Biology, Pennsylvania State University, University Park, Pennsylvania 16802, USA
| | - Danling Ye
- Department of Biology, Pennsylvania State University, University Park, Pennsylvania 16802, USA
| | - Patricia C M O'Brien
- Department of Veterinary Medicine, University of Cambridge, Cambridge CB3 0ES, United Kingdom
| | - Rayan Chikhi
- University of Lille 1/CNRS 59655 Villeneuve d'Ascq, France; Department of Computer Science and Engineering, Pennsylvania State University, University Park, Pennsylvania 16802, USA; The Genome Sciences Institute of the Huck Institutes of the Life Sciences, Pennsylvania State University, University Park, Pennsylvania 16802, USA
| | - Oliver A Ryder
- San Diego Zoo Institute for Conservation Research, Escondido, California 92027, USA
| | | | - Paul Medvedev
- Department of Computer Science and Engineering, Pennsylvania State University, University Park, Pennsylvania 16802, USA; The Genome Sciences Institute of the Huck Institutes of the Life Sciences, Pennsylvania State University, University Park, Pennsylvania 16802, USA; Department of Biochemistry and Molecular Biology, Pennsylvania State University, University Park, Pennsylvania 16802, USA
| | - Kateryna D Makova
- Department of Biology, Pennsylvania State University, University Park, Pennsylvania 16802, USA
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21
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Capps B, Lederman Z. One Health, Vaccines and Ebola: The Opportunities for Shared Benefits. JOURNAL OF AGRICULTURAL & ENVIRONMENTAL ETHICS 2015; 28:1011-1032. [PMID: 32214867 PMCID: PMC7088325 DOI: 10.1007/s10806-015-9574-7] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Accepted: 09/01/2015] [Indexed: 05/05/2023]
Abstract
The 2013 Ebola virus outbreak in West Africa, as of writing, is declining in reported human cases and mortalities. The resulting devastation caused highlights how health systems, in particular in West Africa, and in terms of global pandemic planning, are ill prepared to react to zoonotic pathogens. In this paper we propose One Health as a strategy to prevent zoonotic outbreaks as a shared goal: that human and Great Ape vaccine trials could benefit both species. Only recently have two phase 2/3 Ebola human vaccine trials been started in West Africa. This paper argues for a conceptual change in pandemic preparedness. We first discuss the ethics of One Health. Next, we focus on the current Ebola outbreak and defines its victims. Third, we present the notion of a 'shared benefit' approach, grounded in One Health, and argue for the vaccination of wild apes in order to protect both apes and humans. We believe that a creation of such inter-species immunity is an exemplar of One Health, and that it is worth pursuing as a coextensive public health approach.
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Affiliation(s)
- Benjamin Capps
- Department of Bioethics, Faculty of Medicine, Dalhousie University, 5849 University Avenue, Room C-312, CRC Bldg, PO Box 15000, Halifax, NS B3H 4R2 Canada
| | - Zohar Lederman
- Sourasky Medical Center, Tel Aviv, Israel
- Centre for Biomedical Ethics, Loo Long Lin School of Medicine, National University of Singapore, 21 Lower Kent Ridge Road, Singapore, Singapore
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