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Verhille CE, MacDonald M, Noble B, Demorest G, Roche A, Frazier K, Albertson LK. Thermal tolerance of giant salmonfly nymphs ( Pteronarcys californica) varies across populations in a regulated river. CONSERVATION PHYSIOLOGY 2024; 12:coae043. [PMID: 38974500 PMCID: PMC11225080 DOI: 10.1093/conphys/coae043] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/29/2023] [Revised: 05/24/2024] [Accepted: 06/10/2024] [Indexed: 07/09/2024]
Abstract
Warming of aquatic ecosystems is transforming the distribution, phenology and growth of the organisms dependent upon these ecosystems. Aquatic insects such as stoneflies are especially vulnerable to warming because the aquatic nymph stage of their life cycle depends on cool, well-oxygenated, flowing water habitat. We tracked thermal effects on available aerobic capacity of the aquatic nymph stage of an iconic and vulnerable stonefly species, the giant salmonfly (Pteronarcys californica), to compare habitat thermal regime measurements for two salmonfly populations from habitats separated by a gradient in summer weekly maximum temperatures. Contrary to expectations, the thermal optima range of the warmer habitat population was cooler than for the cooler habitat population. We posit that this unexpected interpopulation variation in thermal response is more strongly driven by diel and seasonal thermal variability than by the highest summer temperatures experienced within respective habitats. Additionally, we show that summer daily maximum temperatures could result in periodic limits in available aerobic capacity to support work of the warmer habitat nymphs and may be the mechanism underlying reduced abundance relative to the upstream cooler habitat population. Our findings provide insight into potential thermal and metabolic mechanisms that could regulate the success of ecological and culturally important aquatic insect species experiencing global change. We conclude that thermal regimes and thermal variation, not just mean and maximum temperatures, are critical drivers of aquatic insect responses to water temperatures.
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Affiliation(s)
| | - Michael MacDonald
- Department of Ecology, Montana State University, Bozeman, MT 59717, USA
| | - Ben Noble
- Department of Ecology, Montana State University, Bozeman, MT 59717, USA
| | - Gavin Demorest
- Department of Ecology, Montana State University, Bozeman, MT 59717, USA
| | - Alzada Roche
- Department of Ecology, Montana State University, Bozeman, MT 59717, USA
| | - Kayleigh Frazier
- Department of Ecology, Montana State University, Bozeman, MT 59717, USA
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2
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Dang Z, Li J, Liu Y, Song M, Lockhart PJ, Tian Y, Niu M, Wang Q. RADseq-based population genomic analysis and environmental adaptation of rare and endangered recretohalophyte Reaumuria trigyna. THE PLANT GENOME 2024; 17:e20303. [PMID: 36740755 DOI: 10.1002/tpg2.20303] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/15/2022] [Accepted: 11/30/2022] [Indexed: 06/18/2023]
Abstract
Genetic diversity reflects the survival potential, history, and population dynamics of an organism. It underlies the adaptive potential of populations and their response to environmental change. Reaumuria trigyna is an endemic species in the Eastern Alxa and West Ordos desert regions in China. The species has been considered a good candidate to explore the unique survival strategies of plants that inhabit this area. In this study, we performed population genomic analyses based on restriction-site associated DNA sequencing to understand the genetic diversity, population genetic structure, and differentiation of the species. Analyses of 92,719 high-quality single-nucleotide polymorphisms (SNPs) indicated that overall genetic diversity of R. trigyna was low (HO = 0.249 and HE = 0.208). No significant genetic differentiation was observed among the investigated populations. However, a subtle population genetic structure was detected. We suggest that this might be explained by adaptive diversification reinforced by the geographical isolation of populations. Overall, 3513 outlier SNPs were located in 243 gene-coding sequences in the R. trigyna transcriptome. Potential sites under diversifying selection occurred in genes (e.g., AP2/EREBP, E3 ubiquitin-protein ligase, FLS, and 4CL) related to phytohormone regulation and synthesis of secondary metabolites which have roles in adaptation of species. Our genetic analyses provide scientific criteria for evaluating the evolutionary capacity of R. trigyna and the discovery of unique adaptions. Our findings extend knowledge of refugia, environmental adaption, and evolution of germplasm resources that survive in the Ordos area.
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Affiliation(s)
- Zhenhua Dang
- Ministry of Education Key Laboratory of Ecology and Resource Use of the Mongolian Plateau & Inner Mongolia Key Laboratory of Grassland Ecology, School of Ecology and Environment, Inner Mongolia University, Hohhot, China
| | - Jiabin Li
- Ministry of Education Key Laboratory of Ecology and Resource Use of the Mongolian Plateau & Inner Mongolia Key Laboratory of Grassland Ecology, School of Ecology and Environment, Inner Mongolia University, Hohhot, China
| | - Yanan Liu
- Ministry of Education Key Laboratory of Ecology and Resource Use of the Mongolian Plateau & Inner Mongolia Key Laboratory of Grassland Ecology, School of Ecology and Environment, Inner Mongolia University, Hohhot, China
| | - Miaomiao Song
- Ministry of Education Key Laboratory of Ecology and Resource Use of the Mongolian Plateau & Inner Mongolia Key Laboratory of Grassland Ecology, School of Ecology and Environment, Inner Mongolia University, Hohhot, China
| | - Peter J Lockhart
- School of Natural Sciences, College of Sciences, Massey University, Palmerston North, New Zealand
| | - Yunyun Tian
- Ministry of Education Key Laboratory of Herbage & Endemic Crop Biotechnology, School of Life Sciences, Inner Mongolia University, Hohhot, China
| | - Miaomiao Niu
- Ministry of Education Key Laboratory of Ecology and Resource Use of the Mongolian Plateau & Inner Mongolia Key Laboratory of Grassland Ecology, School of Ecology and Environment, Inner Mongolia University, Hohhot, China
| | - Qinglang Wang
- Ministry of Education Key Laboratory of Ecology and Resource Use of the Mongolian Plateau & Inner Mongolia Key Laboratory of Grassland Ecology, School of Ecology and Environment, Inner Mongolia University, Hohhot, China
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3
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Eastwood N, Zhou J, Derelle R, Abdallah MAE, Stubbings WA, Jia Y, Crawford SE, Davidson TA, Colbourne JK, Creer S, Bik H, Hollert H, Orsini L. 100 years of anthropogenic impact causes changes in freshwater functional biodiversity. eLife 2023; 12:RP86576. [PMID: 37933221 PMCID: PMC10629823 DOI: 10.7554/elife.86576] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2023] Open
Abstract
Despite efforts from scientists and regulators, biodiversity is declining at an alarming rate. Unless we find transformative solutions to preserve biodiversity, future generations may not be able to enjoy nature's services. We have developed a conceptual framework that establishes the links between biodiversity dynamics and abiotic change through time and space using artificial intelligence. Here, we apply this framework to a freshwater ecosystem with a known history of human impact and study 100 years of community-level biodiversity, climate change and chemical pollution trends. We apply explainable network models with multimodal learning to community-level functional biodiversity measured with multilocus metabarcoding, to establish correlations with biocides and climate change records. We observed that the freshwater community assemblage and functionality changed over time without returning to its original state, even if the lake partially recovered in recent times. Insecticides and fungicides, combined with extreme temperature events and precipitation, explained up to 90% of the functional biodiversity changes. The community-level biodiversity approach used here reliably explained freshwater ecosystem shifts. These shifts were not observed when using traditional quality indices (e.g. Trophic Diatom Index). Our study advocates the use of high-throughput systemic approaches on long-term trends over species-focused ecological surveys to identify the environmental factors that cause loss of biodiversity and disrupt ecosystem functions.
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Affiliation(s)
- Niamh Eastwood
- Environmental Genomics Group, School of Biosciences, University of BirminghamBirminghamUnited Kingdom
| | - Jiarui Zhou
- Environmental Genomics Group, School of Biosciences, University of BirminghamBirminghamUnited Kingdom
| | - Romain Derelle
- Environmental Genomics Group, School of Biosciences, University of BirminghamBirminghamUnited Kingdom
| | | | - William A Stubbings
- Environmental Genomics Group, School of Biosciences, University of BirminghamBirminghamUnited Kingdom
- School of Geography, Earth & Environmental Sciences, University of BirminghamBirminghamUnited Kingdom
| | - Yunlu Jia
- Department Evolutionary Ecology & Environmental Toxicology, Faculty of Biological Sciences, Goethe University FrankfurtFrankfurtGermany
| | - Sarah E Crawford
- Department Evolutionary Ecology & Environmental Toxicology, Faculty of Biological Sciences, Goethe University FrankfurtFrankfurtGermany
| | - Thomas A Davidson
- Lake Group, Department of Ecoscience, Aarhus UniversityAarhusDenmark
| | - John K Colbourne
- Environmental Genomics Group, School of Biosciences, University of BirminghamBirminghamUnited Kingdom
| | - Simon Creer
- School of Natural Sciences, Environment Centre Wales, Deiniol Road, Bangor UniversityBangorUnited Kingdom
| | - Holly Bik
- Department Marine Sciences and Institute of Bioinformatics, University of GeorgiaAthensUnited States
| | - Henner Hollert
- Department Evolutionary Ecology & Environmental Toxicology, Faculty of Biological Sciences, Goethe University FrankfurtFrankfurtGermany
- LOEWE Centre for Translational Biodiversity Genomics (LOEWE‐TBG)FrankfurtGermany
- Department Media-related Toxicology, Institute for Molecular Biology and Applied Ecology (IME)FrankfurtGermany
| | - Luisa Orsini
- Environmental Genomics Group, School of Biosciences, University of BirminghamBirminghamUnited Kingdom
- The Alan Turing Institute, British LibraryLondonUnited Kingdom
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4
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Burggren WW, Mendez-Sanchez JF. "Bet hedging" against climate change in developing and adult animals: roles for stochastic gene expression, phenotypic plasticity, epigenetic inheritance and adaptation. Front Physiol 2023; 14:1245875. [PMID: 37869716 PMCID: PMC10588650 DOI: 10.3389/fphys.2023.1245875] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/23/2023] [Accepted: 09/12/2023] [Indexed: 10/24/2023] Open
Abstract
Animals from embryos to adults experiencing stress from climate change have numerous mechanisms available for enhancing their long-term survival. In this review we consider these options, and how viable they are in a world increasingly experiencing extreme weather associated with climate change. A deeply understood mechanism involves natural selection, leading to evolution of new adaptations that help cope with extreme and stochastic weather events associated with climate change. While potentially effective at staving off environmental challenges, such adaptations typically occur very slowly and incrementally over evolutionary time. Consequently, adaptation through natural selection is in most instances regarded as too slow to aid survival in rapidly changing environments, especially when considering the stochastic nature of extreme weather events associated with climate change. Alternative mechanisms operating in a much shorter time frame than adaptation involve the rapid creation of alternate phenotypes within a life cycle or a few generations. Stochastic gene expression creates multiple phenotypes from the same genotype even in the absence of environmental cues. In contrast, other mechanisms for phenotype change that are externally driven by environmental clues include well-understood developmental phenotypic plasticity (variation, flexibility), which can enable rapid, within-generation changes. Increasingly appreciated are epigenetic influences during development leading to rapid phenotypic changes that can also immediately be very widespread throughout a population, rather than confined to a few individuals as in the case of favorable gene mutations. Such epigenetically-induced phenotypic plasticity can arise rapidly in response to stressors within a generation or across a few generations and just as rapidly be "sunsetted" when the stressor dissipates, providing some capability to withstand environmental stressors emerging from climate change. Importantly, survival mechanisms resulting from adaptations and developmental phenotypic plasticity are not necessarily mutually exclusive, allowing for classic "bet hedging". Thus, the appearance of multiple phenotypes within a single population provides for a phenotype potentially optimal for some future environment. This enhances survival during stochastic extreme weather events associated with climate change. Finally, we end with recommendations for future physiological experiments, recommending in particular that experiments investigating phenotypic flexibility adopt more realistic protocols that reflect the stochastic nature of weather.
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Affiliation(s)
- Warren W. Burggren
- Developmental Integrative Biology Group, Department of Biological Sciences, University of North Texas, Denton, TX, United States
| | - Jose Fernando Mendez-Sanchez
- Laboratorio de Ecofisiología Animal, Departamento de Biología, Facultad de Ciencias, Universidad Autónoma del Estado de México, Toluca, Mexico
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5
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Scheffer H, Coate JE, Ho EKH, Schaack S. Thermal stress and mutation accumulation increase heat shock protein expression in Daphnia. Evol Ecol 2022; 36:829-844. [PMID: 36193163 PMCID: PMC9522699 DOI: 10.1007/s10682-022-10209-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/08/2022] [Accepted: 08/25/2022] [Indexed: 11/28/2022]
Abstract
Understanding the short- and long-term consequences of climate change is a major challenge in biology. For aquatic organisms, temperature changes and drought can lead to thermal stress and habitat loss, both of which can ultimately lead to higher mutation rates. Here, we examine the effect of high temperature and mutation accumulation on gene expression at two loci from the heat shock protein (HSP) gene family, HSP60 and HSP90. HSPs have been posited to serve as 'mutational capacitors' given their role as molecular chaperones involved in protein folding and degradation, thus buffering against a wide range of cellular stress and destabilization. We assayed changes in HSP expression across 5 genotypes of Daphnia magna, a sentinel species in ecology and environmental biology, with and without acute exposure to thermal stress and accumulated mutations. Across genotypes, HSP expression increased ~ 6× in response to heat and ~ 4× with mutation accumulation, individually. Both factors simultaneously (lineages with high mutation loads exposed to high heat) increased gene expression ~ 23×-much more than that predicted by an additive model. Our results corroborate suggestions that HSPs can buffer against not only the effects of heat, but also mutations-a combination of factors both likely to increase in a warming world. Supplementary Information The online version contains supplementary material available at 10.1007/s10682-022-10209-1.
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Affiliation(s)
- Henry Scheffer
- Department of Biology, Reed College, 3203 SE Woodstock Blvd, Portland, OR 97202 USA
| | - Jeremy E. Coate
- Department of Biology, Reed College, 3203 SE Woodstock Blvd, Portland, OR 97202 USA
| | - Eddie K. H. Ho
- Department of Biology, Reed College, 3203 SE Woodstock Blvd, Portland, OR 97202 USA
| | - Sarah Schaack
- Department of Biology, Reed College, 3203 SE Woodstock Blvd, Portland, OR 97202 USA
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6
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Abdullahi M, Zhou J, Dandhapani V, Chaturvedi A, Orsini L. Historical exposure to chemicals reduces tolerance to novel chemical stress in Daphnia (waterflea). Mol Ecol 2022; 31:3098-3111. [PMID: 35377519 PMCID: PMC9321109 DOI: 10.1111/mec.16451] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/13/2021] [Revised: 03/23/2022] [Accepted: 03/28/2022] [Indexed: 12/02/2022]
Abstract
Until the last few decades, anthropogenic chemicals used in most production processes have not been comprehensively assessed for their risk and impact on wildlife and humans. They are transported globally and usually end up in the environment as unintentional pollutants, causing long‐term adverse effects. Modern toxicology practices typically use acute toxicity tests of unrealistic concentrations of chemicals to determine their safe use, missing pathological effects arising from long‐term exposures to environmentally relevant concentrations. Here, we study the transgenerational effect of environmentally relevant concentrations of five chemicals on the priority list of international regulatory frameworks on the keystone species Daphnia magna. We expose Daphnia genotypes resurrected from the sedimentary archive of a lake with a known history of chemical pollution to the five chemicals to understand how historical exposure to chemicals influences adaptive responses to novel chemical stress. We measure within‐ and transgenerational plasticity in fitness‐linked life history traits following exposure of “experienced” and “naive” genotypes to novel chemical stress. As the revived Daphnia originate from the same genetic pool sampled at different times in the past, we are able to quantify the long‐term evolutionary impact of chemical pollution by studying genome‐wide diversity and identifying functional pathways affected by historical chemical stress. Our results suggest that historical exposure to chemical stress causes reduced genome‐wide diversity, leading to lower cross‐generational tolerance to novel chemical stress. Lower tolerance is underpinned by reduced gene diversity at detoxification, catabolism and endocrine genes in experienced genotypes. We show that these genes sit within pathways that are conserved and potential chemical targets in other species, including humans.
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Affiliation(s)
- Muhammad Abdullahi
- Environmental Genomics Group, School of Biosciences, the University of Birmingham, Birmingham, B15 2TT, UK
| | - Jiarui Zhou
- Environmental Genomics Group, School of Biosciences, the University of Birmingham, Birmingham, B15 2TT, UK
| | - Vignesh Dandhapani
- Environmental Genomics Group, School of Biosciences, the University of Birmingham, Birmingham, B15 2TT, UK
| | - Anurag Chaturvedi
- Environmental Genomics Group, School of Biosciences, the University of Birmingham, Birmingham, B15 2TT, UK
| | - Luisa Orsini
- Environmental Genomics Group, School of Biosciences, the University of Birmingham, Birmingham, B15 2TT, UK.,The Alan Turing Institute, British Library, 96 Euston Road, London, NW1 2DB, UK
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7
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Meng S, Delnat V, Stoks R. Multigenerational effects modify the tolerance of mosquito larvae to chlorpyrifos but not to a heat spike and do not change their synergism. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2022; 292:118333. [PMID: 34637829 DOI: 10.1016/j.envpol.2021.118333] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/23/2021] [Revised: 10/03/2021] [Accepted: 10/07/2021] [Indexed: 06/13/2023]
Abstract
While interactions with global warming and multigenerational effects are considered crucial to improve risk assessment of pesticides, these have rarely been studied in an integrated way. While heat extremes can magnify pesticide toxicity, no studies tested how their combined effects may transmit to the next generation. We exposed mosquito larvae in a full factorial, two-generation experiment to a heat spike followed by chlorpyrifos exposure. As expected, the heat spike magnified the chlorpyrifos-induced lethal and sublethal effects within both generations. Only when preceded by the heat spike, chlorpyrifos increased mortality and reduced the population growth rate. Moreover, chlorpyrifos-induced reductions in heat tolerance (CTmax), acetylcholinesterase (AChE) activity and development time were further magnified by the heat spike. Notably, when parents were exposed to chlorpyrifos, the chlorpyrifos-induced lethal and sublethal effects in the offspring were smaller, indicating increased tolerance to chlorpyrifos. In contrast, there was no such multigenerational effect for the heat spike. Despite the adaptive multigenerational effect to the pesticide, the synergism with the heat spike was still present in the offspring generation. Generally, our results provide important evidence that short exposure to pulse-like global change stressors can strongly affect organisms within and across generations, and highlight the importance of considering multigenerational effects in risk assessment.
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Affiliation(s)
- Shandong Meng
- Laboratory of Evolutionary Stress Ecology and Ecotoxicology, University of Leuven, Belgium.
| | - Vienna Delnat
- Laboratory of Evolutionary Stress Ecology and Ecotoxicology, University of Leuven, Belgium
| | - Robby Stoks
- Laboratory of Evolutionary Stress Ecology and Ecotoxicology, University of Leuven, Belgium
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8
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Madeira D, Fernandes JF, Jerónimo D, Martins P, Ricardo F, Santos A, Domingues MR, Diniz MS, Calado R. Salinity shapes the stress responses and energy reserves of marine polychaetes exposed to warming: From molecular to functional phenotypes. THE SCIENCE OF THE TOTAL ENVIRONMENT 2021; 795:148634. [PMID: 34246144 DOI: 10.1016/j.scitotenv.2021.148634] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/15/2021] [Revised: 06/18/2021] [Accepted: 06/19/2021] [Indexed: 06/13/2023]
Abstract
Estuarine systems are critical transition zones influenced by sea, land and freshwater. An array of human activities impacts these areas leading to multiple-stressor interactions. Temperature and salinity are among the most relevant drivers in estuaries, shaping species growth, reproduction and distribution. However, few studies provide an overview of cellular rewiring processes under multiple-stressor environments. Here, we tested how salinity could shape the response of ragworms Hediste diversicolor, an important bioindicator and commercial species, to elevated temperature. We exposed polychaetes to three temperatures for a month, simulating control, ocean warming and heatwave conditions (24, 27 and 30 °C, respectively) combined with two salinities (20 and 30). We quantified whole-organism performance (wet weight gain and survival), along with cellular stress response (CSR) and energy reserves of worms after 14 and 28 days of exposure. Significant three-way interactions between temperature, salinity and exposure time show the non-linearity of molecular responses. Worms at a salinity of 20 were more sensitive to warming than worms exposed to a salinity of 30. The combination of high temperature and low salinity can act synergistically to induce oxidative stress and macromolecular damage in worm tissues. This finding was supported by an induction of the CSR, with a concomitant decrease of energy reserves, pointing towards a metabolic compensation strategy. However, under a higher salinity (30), the need for a CSR upon thermal challenge was reduced and energy content increased with temperature, which suggests that environmental conditions were within the optimum range. Heatwaves striking low-salinity areas of estuaries can therefore negatively impact the cellular physiology of H. diversicolor, with greater metabolic costs. However, extreme stress levels were not reached as worms incremented wet weight and survival was high under all conditions tested. Our findings are important for the optimization of ragworm aquaculture and adaptive conservation strategies of estuarine systems.
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Affiliation(s)
- Diana Madeira
- ECOMARE-Laboratory for Innovation and Sustainability of Marine Biological Resources, CESAM-Centre for Environmental and Marine Studies, Department of Biology, University of Aveiro, Estrada do Porto de Pesca Costeira, 3830-565 Gafanha da Nazaré, Portugal; UCIBIO-Applied Molecular Biosciences Unit, Department of Chemistry, NOVA School of Science and Technology, NOVA University Lisbon, 2829-516 Caparica, Portugal; University of Quebec in Rimouski (UQAR), Department of Biology, Chemistry and Geography, 300 Allée des Ursulines, Rimouski, QC G5L 3A1, Canada.
| | - Joana Filipa Fernandes
- ECOMARE-Laboratory for Innovation and Sustainability of Marine Biological Resources, CESAM-Centre for Environmental and Marine Studies, Department of Biology, University of Aveiro, Estrada do Porto de Pesca Costeira, 3830-565 Gafanha da Nazaré, Portugal
| | - Daniel Jerónimo
- ECOMARE-Laboratory for Innovation and Sustainability of Marine Biological Resources, CESAM-Centre for Environmental and Marine Studies, Department of Biology, University of Aveiro, Estrada do Porto de Pesca Costeira, 3830-565 Gafanha da Nazaré, Portugal
| | - Patrícia Martins
- ECOMARE-Laboratory for Innovation and Sustainability of Marine Biological Resources, CESAM-Centre for Environmental and Marine Studies, Department of Biology, University of Aveiro, Estrada do Porto de Pesca Costeira, 3830-565 Gafanha da Nazaré, Portugal
| | - Fernando Ricardo
- ECOMARE-Laboratory for Innovation and Sustainability of Marine Biological Resources, CESAM-Centre for Environmental and Marine Studies, Department of Biology, University of Aveiro, Estrada do Porto de Pesca Costeira, 3830-565 Gafanha da Nazaré, Portugal
| | - Andreia Santos
- ECOMARE-Laboratory for Innovation and Sustainability of Marine Biological Resources, CESAM-Centre for Environmental and Marine Studies, Department of Biology, University of Aveiro, Estrada do Porto de Pesca Costeira, 3830-565 Gafanha da Nazaré, Portugal
| | - Maria Rosário Domingues
- Mass Spectrometry Centre, LAQV REQUIMTE-Associated Laboratory for Green Chemistry of the Network of Chemistry and Technology, Department of Chemistry, University of Aveiro, Santiago University Campus, 3810-193 Aveiro, Portugal; ECOMARE-Laboratory for Innovation and Sustainability of Marine Biological Resources, CESAM-Centre for Environmental and Marine Studies, Department of Chemistry, University of Aveiro, Santiago University Campus, 3810-193 Aveiro, Portugal
| | - Mário Sousa Diniz
- UCIBIO-Applied Molecular Biosciences Unit, Department of Chemistry, NOVA School of Science and Technology, NOVA University Lisbon, 2829-516 Caparica, Portugal
| | - Ricardo Calado
- ECOMARE-Laboratory for Innovation and Sustainability of Marine Biological Resources, CESAM-Centre for Environmental and Marine Studies, Department of Biology, University of Aveiro, Estrada do Porto de Pesca Costeira, 3830-565 Gafanha da Nazaré, Portugal.
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9
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Cuenca‐Cambronero M, Pantel JH, Marshall H, Nguyen TTT, Tomero‐Sanz H, Orsini L. Evolutionary mechanisms underpinning fitness response to multiple stressors in Daphnia. Evol Appl 2021; 14:2457-2469. [PMID: 34745337 PMCID: PMC8549616 DOI: 10.1111/eva.13258] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2020] [Revised: 05/13/2021] [Accepted: 05/19/2021] [Indexed: 11/28/2022] Open
Abstract
Multiple stressors linked to anthropogenic activities can influence how organisms adapt and evolve. So far, a consensus on how multiple stressors drive adaptive trajectories in natural populations has not been reached. Some meta-analysis reports show predominance of additive effects of stressors on ecological endpoints (e.g., fecundity, mortality), whereas others show synergistic effects more frequently. Moreover, it is unclear what mechanisms of adaptation underpin responses to complex environments. Here, we use populations of Daphnia magna resurrected from different times in the past to investigate mechanisms of adaptation to multiple stressors and to understand how historical exposure to environmental stress shapes adaptive responses of modern populations. Using common garden experiments on resurrected modern and historical populations, we investigate (1) whether exposure to one stress results in higher tolerance to a second stressor; (2) the mechanisms of adaptation underpinning long-term evolution to multistress (genetic evolution, plasticity, evolution of plasticity); and (3) the interaction effects of multiple stressors on fitness (synergism, antagonism, additivity). We measure the combined impact of different levels of resource availability (algae) and biocides on fitness-linked life-history traits and interpret these results in light of historical environmental exposures. We show that exposure to one stressor can alter tolerance to second stressors and that the interaction effect depends on the severity of either stressor. We also show that mechanisms of adaptation underpinning phenotypic evolution significantly differ in single-stress and multistress scenarios. These adaptive responses are driven largely by synergistic effects on fecundity and size at maturity, and additive effects on age at maturity. Exposure to multiple stressors shifts the trade-offs among fitness-linked life-history traits, with a stronger effect on Daphnia populations when low-resource availability and high biocide levels are experienced. Our study indicates that mitigation interventions based on single-stress analysis may not capture realistic threats.
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Affiliation(s)
- Maria Cuenca‐Cambronero
- Department of Fish Ecology and EvolutionEawagKastanienbaumSwitzerland
- Aquatic Ecology and EvolutionInstitute of Ecology and EvolutionUniversity of BernBernSwitzerland
- Environmental Genomics Group, School of BiosciencesUniversity of BirminghamBirminghamUK
| | - Jelena H. Pantel
- Department of Computer Science, Mathematics, and Environmental ScienceThe American University of ParisParisFrance
| | - Hollie Marshall
- Environmental Genomics Group, School of BiosciencesUniversity of BirminghamBirminghamUK
- Institute of Evolutionary BiologyUniversity of EdinburghEdinburghUK
| | - Tien T. T. Nguyen
- Environmental Genomics Group, School of BiosciencesUniversity of BirminghamBirminghamUK
- Department of Animal and Plant SciencesUniversity of SheffieldSheffieldUK
| | - Henar Tomero‐Sanz
- Environmental Genomics Group, School of BiosciencesUniversity of BirminghamBirminghamUK
- Department of Molecular Cancer Pathology of IRYCISHospital Ramon y CajalMadridSpain
| | - Luisa Orsini
- Environmental Genomics Group, School of BiosciencesUniversity of BirminghamBirminghamUK
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10
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Meng S, Tran TT, Delnat V, Stoks R. Transgenerational exposure to warming reduces the sensitivity to a pesticide under warming. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2021; 284:117217. [PMID: 33915393 DOI: 10.1016/j.envpol.2021.117217] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/20/2021] [Revised: 04/16/2021] [Accepted: 04/20/2021] [Indexed: 06/12/2023]
Abstract
Despite the increased attention for temporal aspects of stressor interactions and for effects of warming in ecotoxicological studies, we lack knowledge on how different exposure durations to warming may affect pesticide sensitivity. We tested how three types of exposure duration to 4 °C warming (acute, developmental and transgenerational exposure to 24 °C vs 20 °C) shape the effect of the pesticide chlorpyrifos on two ecologically relevant fitness-related traits of mosquito larvae: heat tolerance and antipredator behaviour. Transgenerational (from the parental generation) and developmental (from the egg stage) warming appeared energetically more stressful than acute warming (from the final instar), because (i) only the latter resulted in an adaptive increase of heat tolerance, and (ii) especially developmental and transgenerational warming reduced the diving responsiveness and diving time. Exposure to chlorpyrifos decreased the heat tolerance, diving responsiveness and diving time. The impact of chlorpyrifos was lower at 24 °C than at 20 °C indicating that the expected increase in toxicity at 24 °C was overruled by the observed increase in pesticide degradation. Notably, although our results suggest that transgenerational warming was energetically more stressful, it did reduce the chlorpyrifos-induced negative effects at 24 °C on heat tolerance and the alarm escape response compared to acute warming. Our results provide important evidence that the exposure duration to warming may determine the impact of a pesticide under warming, thereby identifying a novel temporal aspect of stressor interactions in risk assessment.
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Affiliation(s)
- Shandong Meng
- Laboratory of Evolutionary Stress Ecology and Ecotoxicology, University of Leuven, Belgium.
| | - Tam T Tran
- Laboratory of Evolutionary Stress Ecology and Ecotoxicology, University of Leuven, Belgium; Institute of Aquaculture, Nha Trang University, Khanh Hoa, Viet Nam
| | - Vienna Delnat
- Laboratory of Evolutionary Stress Ecology and Ecotoxicology, University of Leuven, Belgium
| | - Robby Stoks
- Laboratory of Evolutionary Stress Ecology and Ecotoxicology, University of Leuven, Belgium
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11
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Coggins BL, Pearson AC, Yampolsky LY. Does geographic variation in thermal tolerance in Daphnia represent trade-offs or conditional neutrality? J Therm Biol 2021; 98:102934. [PMID: 34016356 DOI: 10.1016/j.jtherbio.2021.102934] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/04/2020] [Revised: 02/20/2021] [Accepted: 03/29/2021] [Indexed: 10/21/2022]
Abstract
Geographic variation in thermal tolerance in Daphnia seems to represent genetic load at the loci specifically responsible for heat tolerance resulting from conditional neutrality. We see no evidence of trade-offs between fitness-related traits at 25 °C vs. 10 °C or between two algal diets across Daphnia magna clones from a variety of locations representing the opposite ends of the distribution of long-term heat tolerance. Likewise, we found no evidence of within-environment trade-offs between heat tolerance and fitness-related traits in any of the environments. Neither short-term and long-term heat tolerance shows any consistent relationship with lipid fluorescence polarization and lipid peroxidation across clones or environments. Pervasive positive correlations between fitness-related traits indicate differences in genetic load rather than trade-off based local adaptation or thermal specialization. For heat tolerance such differences may be caused by either relaxation of stabilizing selection due to lower exposure to high temperature extremes, i.e., conditional neutrality, or by small effective population size followed by the recent range expansion.
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Affiliation(s)
- B L Coggins
- Department of Biological Sciences, East Tennessee State University, Johnson City TN, 37601, USA; Department of Biological Sciences, University of Notre Dame, IN, 46556, USA
| | - A C Pearson
- Department of Biological Sciences, East Tennessee State University, Johnson City TN, 37601, USA
| | - L Y Yampolsky
- Department of Biological Sciences, East Tennessee State University, Johnson City TN, 37601, USA; University of Basel, Department of Environmental Sciences, Zoology, University of Basel, Vesalgasse 1, 4051, Basel, Switzerland.
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12
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Tian C, Li Y, Wu Y, Chu W, Liu H. Sustaining induced heat shock protein 70 confers biological thermotolerance in a high-temperature adapted predatory mite Neoseiulus barkeri (Hughes). PEST MANAGEMENT SCIENCE 2021; 77:939-948. [PMID: 32979024 DOI: 10.1002/ps.6104] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/27/2020] [Revised: 09/05/2020] [Accepted: 09/26/2020] [Indexed: 05/19/2023]
Abstract
BACKGROUND In fluctuating climatic environments, heat acclimation in predatory mites is a superior adaptation strategy for effective agricultural pest management and can be used to enhance the abilities critical in biological control efficiency. We investigated the regulatory mechanism governing the remarkable plastic response of thermotolerance in a high-temperature adapted strain (HTAS) and discerned the differences in the defensive reactions between the HTAS and the conventional strain (CS) in the predatory mite Neoseiulus barkeri. RESULTS At 42 °C, the relative expression levels of four identified HSP70 genes increased rapidly in both N. barkeri strains; meanwhile the expression of NbHSP70-1 and NbHSP70-2 in CS sharply decreased after 4 h, displaying a distinct contrast with the remaining elevated expression in HTAS. Western blot analysis showed that the protein level of NbHSP70-1 in CS was dramatically elevated at 0.5 h and decreased at 6 h at 42 °C. Conversely, in HTAS, NbHSP70-1 was constantly induced and peaked at 6 h at 42 °C. Furthermore, HSP70 suppression by RNAi knockdown had a greater influence on the survival of HTAS, causing a higher mortality under high temperature than CS. Finally, the recombinant exogenous NbHSP70-1 protein enhanced the viability of E. coli BL21 under a lethal temperature of 50 °C. CONCLUSION Sustained accumulation of HSP70 proteins results in predatory phytoseiid mites with the thermotolerance advantage that could promote their biological control function to pests. The divergent constitutive regulation of HSP70 to a thermal environment is conducive to the flexible adaptability of predators in the higher trophic level to trade off under extremely adversity stress.
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Affiliation(s)
- Chuanbei Tian
- Chongqing Key Laboratory of Entomology and Pest Control Engineering, College of Plant Protection, Southwest University, Chongqing, China
| | - Yaying Li
- Chongqing Key Laboratory of Entomology and Pest Control Engineering, College of Plant Protection, Southwest University, Chongqing, China
| | - Yixia Wu
- Chongqing Key Laboratory of Entomology and Pest Control Engineering, College of Plant Protection, Southwest University, Chongqing, China
| | - Wenqiang Chu
- Chongqing Key Laboratory of Entomology and Pest Control Engineering, College of Plant Protection, Southwest University, Chongqing, China
| | - Huai Liu
- Chongqing Key Laboratory of Entomology and Pest Control Engineering, College of Plant Protection, Southwest University, Chongqing, China
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13
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Suppa A, Kvist J, Li X, Dhandapani V, Almulla H, Tian AY, Kissane S, Zhou J, Perotti A, Mangelson H, Langford K, Rossi V, Brown JB, Orsini L. Roundup causes embryonic development failure and alters metabolic pathways and gut microbiota functionality in non-target species. MICROBIOME 2020; 8:170. [PMID: 33339542 PMCID: PMC7780628 DOI: 10.1186/s40168-020-00943-5] [Citation(s) in RCA: 25] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/15/2020] [Accepted: 11/09/2020] [Indexed: 05/27/2023]
Abstract
BACKGROUND Research around the weedkiller Roundup is among the most contentious of the twenty-first century. Scientists have provided inconclusive evidence that the weedkiller causes cancer and other life-threatening diseases, while industry-paid research reports that the weedkiller has no adverse effect on humans or animals. Much of the controversial evidence on Roundup is rooted in the approach used to determine safe use of chemicals, defined by outdated toxicity tests. We apply a system biology approach to the biomedical and ecological model species Daphnia to quantify the impact of glyphosate and of its commercial formula, Roundup, on fitness, genome-wide transcription and gut microbiota, taking full advantage of clonal reproduction in Daphnia. We then apply machine learning-based statistical analysis to identify and prioritize correlations between genome-wide transcriptional and microbiota changes. RESULTS We demonstrate that chronic exposure to ecologically relevant concentrations of glyphosate and Roundup at the approved regulatory threshold for drinking water in the US induce embryonic developmental failure, induce significant DNA damage (genotoxicity), and interfere with signaling. Furthermore, chronic exposure to the weedkiller alters the gut microbiota functionality and composition interfering with carbon and fat metabolism, as well as homeostasis. Using the "Reactome," we identify conserved pathways across the Tree of Life, which are potential targets for Roundup in other species, including liver metabolism, inflammation pathways, and collagen degradation, responsible for the repair of wounds and tissue remodeling. CONCLUSIONS Our results show that chronic exposure to concentrations of Roundup and glyphosate at the approved regulatory threshold for drinking water causes embryonic development failure and alteration of key metabolic functions via direct effect on the host molecular processes and indirect effect on the gut microbiota. The ecological model species Daphnia occupies a central position in the food web of aquatic ecosystems, being the preferred food of small vertebrates and invertebrates as well as a grazer of algae and bacteria. The impact of the weedkiller on this keystone species has cascading effects on aquatic food webs, affecting their ability to deliver critical ecosystem services. Video Abstract.
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Affiliation(s)
- Antonio Suppa
- Environmental Genomics Group, School of Biosciences, the University of Birmingham, Birmingham, B15 2TT UK
- Department of Chemistry, Life Sciences and Environmental Sustainability University of Parma, Department of Life Sciences, Viale Usberti, 11/A, Parma, Italy
| | - Jouni Kvist
- School of Biosciences, University of Birmingham, Birmingham, B15 2TT UK
| | - Xiaojing Li
- Environmental Genomics Group, School of Biosciences, the University of Birmingham, Birmingham, B15 2TT UK
| | - Vignesh Dhandapani
- Environmental Genomics Group, School of Biosciences, the University of Birmingham, Birmingham, B15 2TT UK
| | - Hanan Almulla
- Environmental Genomics Group, School of Biosciences, the University of Birmingham, Birmingham, B15 2TT UK
| | | | - Stephen Kissane
- Environmental Genomics Group, School of Biosciences, the University of Birmingham, Birmingham, B15 2TT UK
| | - Jiarui Zhou
- Environmental Genomics Group, School of Biosciences, the University of Birmingham, Birmingham, B15 2TT UK
| | - Alessio Perotti
- School of Biosciences, University of Birmingham, Birmingham, B15 2TT UK
| | | | | | - Valeria Rossi
- Department of Chemistry, Life Sciences and Environmental Sustainability University of Parma, Department of Life Sciences, Viale Usberti, 11/A, Parma, Italy
| | - James B. Brown
- Environmental Bioinformatics, Centre for Computational Biology, School of Biosciences, University of Birmingham Edgbaston, Birmingham, B15 2TT UK
- Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720 USA
- Statistics Department, University of California, Berkeley, Berkeley, CA, 94720 USA, Preminon LLC, Rodeo, CA 94572 USA
| | - Luisa Orsini
- Environmental Genomics Group, School of Biosciences, the University of Birmingham, Birmingham, B15 2TT UK
- Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720 USA
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14
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Akman M, Carlson JE, Latimer AM. Climate explains population divergence in drought-induced plasticity of functional traits and gene expression in a South African Protea. Mol Ecol 2020; 30:255-273. [PMID: 33098695 DOI: 10.1111/mec.15705] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/04/2019] [Revised: 10/04/2020] [Accepted: 10/06/2020] [Indexed: 12/18/2022]
Abstract
Long-term environmental variation often drives local adaptation and leads to trait differentiation across populations. Additionally, when traits change in an environment-dependent way through phenotypic plasticity, the genetic variation underlying plasticity will also be under selection. These processes could create a landscape of differentiation across populations in traits and their plasticity. Here, we performed a dry-down experiment under controlled conditions to measure responses in seedlings of a shrub species from the Cape Floristic Region, the common sugarbush (Protea repens). We measured morphological and physiological traits, and sequenced whole transcriptomes of leaf tissues from eight populations that represent both the climatic and the geographical distribution of this species. We found that there is substantial variation in how populations respond to drought, but we also observed common patterns such as reduced leaf size and leaf thickness, and up-regulation of stress-related and down-regulation of growth-related gene groups. Both high environmental heterogeneity and milder source site climates were associated with higher plasticity in various traits and co-expression gene networks. Associations between traits, trait plasticity, gene networks and the source site climate suggest that temperature may play a greater role in shaping these patterns when compared to precipitation, in line with recent changes in the region due to climate change. We also found that traits respond to climatic variation in an environment-dependent manner: some associations between traits and climate were apparent only under certain growing conditions. Together, our results uncover common responses of P. repens populations to drought, and climatic drivers of population differentiation in functional traits, gene expression and their plasticity.
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Affiliation(s)
- Melis Akman
- Department of Plant Sciences, UC Davis, Davis, CA, USA.,Department of Plant and Microbial Biology, UC Berkeley, Berkeley, CA, USA
| | - Jane E Carlson
- Department of Biology, Nicholls State University, Thibodaux, LA, USA.,Gulf Coast Network Inventory and Monitoring Program, National Park Services, Washington, DC, USA
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15
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Meng S, Delnat V, Stoks R. Mosquito larvae that survive a heat spike are less sensitive to subsequent exposure to the pesticide chlorpyrifos. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2020; 265:114824. [PMID: 32454381 DOI: 10.1016/j.envpol.2020.114824] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/22/2019] [Revised: 04/10/2020] [Accepted: 05/14/2020] [Indexed: 06/11/2023]
Abstract
While extreme high temperatures are an important aspect of global warming, their effects on organisms are relatively understudied, especially in ecotoxicology. Sequential exposure to heat spikes and pesticides is a realistic scenario as both are typically transient stressors and are expected to further increase in frequency under global warming. We tested the effects of exposure to a lethal heat spike and subsequently to an ecologically relevant lethal pulse exposure of the pesticide chlorpyrifos in the larvae of mosquito Culex pipiens. The heat spike caused direct and delayed mortality, and resulted in a higher heat tolerance and activity of acetylcholinesterase, and a lower fat content in the survivors. The chlorpyrifos exposure caused mortality, accelerated growth rate, and decreased the heat tolerance and the activity of acetylcholinesterase. The preceding heat spike did not change how chlorpyrifos reduced the heat tolerance. Notably, the preceding heat spike did lower the lethal effect of the pesticide, which makes an important novel finding at the interface of ecotoxicology and global change biology, and adds a new dimension to the "climate-induced toxicant sensitivity" (CITS) concept. This may be due to both survival selection and cross-tolerance, and therefore likely a widespread phenomenon. Our results emphasize the importance of including extreme high temperatures as an important transient global change stressor in ecotoxicology.
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Affiliation(s)
- Shandong Meng
- Laboratory of Evolutionary Stress Ecology and Ecotoxicology, University of Leuven, Belgium.
| | - Vienna Delnat
- Laboratory of Evolutionary Stress Ecology and Ecotoxicology, University of Leuven, Belgium
| | - Robby Stoks
- Laboratory of Evolutionary Stress Ecology and Ecotoxicology, University of Leuven, Belgium
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16
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Meng S, Delnat V, Stoks R. The Exposure Order Strongly Modifies How a Heat Spike Increases Pesticide Toxicity. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2020; 54:11476-11484. [PMID: 32804496 DOI: 10.1021/acs.est.0c03848] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
The exposure order may strongly affect the impact of stressors, yet is largely ignored for the frequently occurring combinations of toxicants with natural stressors. We tested how exposure order shaped the interactive effects of serial exposure to the pesticide chlorpyrifos and to a heat spike in the larvae of the mosquito Culex pipiens. Notably, the chlorpyrifos-induced mortality was much more magnified by the heat spike and a synergism was already detected at the low concentration when exposure to chlorpyrifos followed the heat spike. This suggests that the preceding heat spike weakened the larvae as reflected in their lower net energy budget, moreover the chlorpyrifos-induced inhibition of its target enzyme (acetylcholinesterase) was only magnified by the heat spike when it was the first stressor. Also the chlorpyrifos-induced reduction in heat tolerance was stronger when the pesticide pulse followed the heat spike, and was buffered by the heat spike when this was the second stressor. Our results provide the first evidence that the exposure order can strongly change the magnifying effect of an important climate change factor on the toxicity of a pesticide. This highlights the importance of exposure order in ecological risk assessment of toxicants under realistic combinations with natural stressors.
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Affiliation(s)
- Shandong Meng
- Laboratory of Evolutionary Stress Ecology and Ecotoxicology, University of Leuven, Leuven 3000, Belgium
| | - Vienna Delnat
- Laboratory of Evolutionary Stress Ecology and Ecotoxicology, University of Leuven, Leuven 3000, Belgium
| | - Robby Stoks
- Laboratory of Evolutionary Stress Ecology and Ecotoxicology, University of Leuven, Leuven 3000, Belgium
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17
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Sun H, Chen W, Wang J, Zhang L, Rossiter SJ, Mao X. Echolocation call frequency variation in horseshoe bats: molecular basis revealed by comparative transcriptomics. Proc Biol Sci 2020; 287:20200875. [PMID: 32900318 DOI: 10.1098/rspb.2020.0875] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023] Open
Abstract
Recently diverged taxa with contrasting phenotypes offer opportunities for unravelling the genetic basis of phenotypic variation in nature. Horseshoe bats are a speciose group that exhibit a derived form of high-duty cycle echolocation in which the inner ear is finely tuned to echoes of the narrowband call frequency. Here, by focusing on three recently diverged subspecies of the intermediate horseshoe bat (Rhinolophus affinis) that display divergent echolocation call frequencies, we aim to identify candidate loci putatively involved in hearing frequency variation. We used de novo transcriptome sequencing of two mainland taxa (himalayanus and macrurus) and one island taxon (hainanus) to compare expression profiles of thousands of genes. By comparing taxa with divergent call frequencies (around 15 kHz difference), we identified 252 differentially expressed genes, of which six have been shown to be involved in hearing or deafness in human/mouse. To obtain further validation of these results, we applied quantitative reverse transcription-PCR to the candidate gene FBXL15 and found a broad association between the level of expression and call frequency across taxa. The genes identified here represent strong candidate loci associated with hearing frequency variation in bats.
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Affiliation(s)
- Haijian Sun
- School of Ecological and Environmental Sciences, East China Normal University, Shanghai 200062, People's Republic of China
| | - Wenli Chen
- School of Ecological and Environmental Sciences, East China Normal University, Shanghai 200062, People's Republic of China
| | - Jiaying Wang
- Institute of Estuarine and Coastal Research, East China Normal University, Shanghai 200062, People's Republic of China
| | - Libiao Zhang
- Guangdong Key Laboratory of Animal Conservation and Resource Utilization, Guangdong Public Laboratory of Wild Animal Conservation and Utilization, Guangdong Institute of Applied Biological Resources, Guangzhou 510260, People's Republic of China
| | - Stephen J Rossiter
- School of Biological and Chemical Sciences, Queen Mary University of London, London E1 4NS, UK
| | - Xiuguang Mao
- School of Ecological and Environmental Sciences, East China Normal University, Shanghai 200062, People's Republic of China.,Institute of Eco-Chongming (IEC), East China Normal University, Shanghai 200062, People's Republic of China
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18
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Grinder RM, Bassar RD, Auer SK. Upper thermal limits are repeatable in Trinidadian guppies. J Therm Biol 2020; 90:102597. [DOI: 10.1016/j.jtherbio.2020.102597] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/06/2020] [Revised: 04/09/2020] [Accepted: 04/13/2020] [Indexed: 10/24/2022]
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19
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Betini GS, Wang X, Avgar T, Guzzo MM, Fryxell JM. Food availability modulates temperature-dependent effects on growth, reproduction, and survival in Daphnia magna. Ecol Evol 2020; 10:756-762. [PMID: 32015841 PMCID: PMC6988562 DOI: 10.1002/ece3.5925] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/19/2019] [Revised: 11/14/2019] [Accepted: 11/15/2019] [Indexed: 01/18/2023] Open
Abstract
Reduced body size and accelerated life cycle due to warming are considered major ecological responses to climate change with fitness costs at the individual level. Surprisingly, we know little about how relevant ecological factors can alter these life history trade-offs and their consequences for individual fitness. Here, we show that food modulates temperature-dependent effects on body size in the water flea Daphnia magna and interacts with temperature to affect life history parameters. We exposed 412 individuals to a factorial manipulation of food abundance and temperature, tracked each reproductive event, and took daily measurements of body size from each individual. High temperature caused a reduction in maximum body size in both food treatments, but this effect was mediated by food abundance, such that low food conditions resulted in a reduction of 20% in maximum body size, compared with a reduction of 4% under high food conditions. High temperature resulted in an accelerated life cycle, with pronounced fitness cost at low levels of food where only a few individuals produced a clutch. These results suggest that the mechanisms affecting the trade-off between fast growth and final body size are food-dependent, and that the combination of low levels of food and high temperature could potentially threaten viability of ectotherms.
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Affiliation(s)
| | - Xueqi Wang
- Department of Integrative BiologyUniversity of GuelphGuelphONCanada
| | - Tal Avgar
- Department of Wildland ResourcesUtah State UniversityLoganUTUSA
| | - Matthew M. Guzzo
- Department of Integrative BiologyUniversity of GuelphGuelphONCanada
| | - John M. Fryxell
- Department of Integrative BiologyUniversity of GuelphGuelphONCanada
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20
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Toyota K, Cambronero Cuenca M, Dhandapani V, Suppa A, Rossi V, Colbourne JK, Orsini L. Transgenerational response to early spring warming in Daphnia. Sci Rep 2019; 9:4449. [PMID: 30872717 PMCID: PMC6418131 DOI: 10.1038/s41598-019-40946-3] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/04/2018] [Accepted: 02/27/2019] [Indexed: 01/30/2023] Open
Abstract
Temperature and photoperiod regulate key fitness traits in plants and animals. However, with temperature increase due to global warming, temperature cue thresholds are experienced at shorter photoperiods, disrupting the optimal seasonal timing of physiological, developmental and reproductive events in many species. Understanding the mechanisms of adaptation to the asynchrony between temperature and photoperiod is key to inform our understanding of how species will respond to global warming. Here, we studied the transgenerational mechanisms of responses of the cyclical parthenogen Daphnia magna to different photoperiod lengths co-occurring with warm temperature thereby assessing the impact of earlier spring warming on its fitness. Daphnia uses temperature and photoperiod cues to time dormancy, and to switch between sexual and asexual reproduction. Daphnia life cycle offers the opportunity to measure the relative contribution of plastic and genetic responses to environmental change across generations and over evolutionary time. We use transgenerational common garden experiments on three populations 'resurrected' from a biological archive experiencing temperature increase over five decades. Our results suggest that response to early spring warming evolved underpinned by a complex interaction between plastic and genetic mechanisms while a positive maternal contribution at matching environments between parental and offspring generation was also observed.
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Affiliation(s)
- Kenji Toyota
- Environmental Genomics Group, School of Biosciences, University of Birmingham, Birmingham, B15 2TT, UK
- Department of Biological Science, Faculty of Science, Kanagawa University, Hiratsuka, Kanagawa, 259-1293, Japan
- Department of Biological Science and Technology, Tokyo University of Science, Katsushika, Tokyo, Japan
| | - Maria Cambronero Cuenca
- Environmental Genomics Group, School of Biosciences, University of Birmingham, Birmingham, B15 2TT, UK
- Aquatic Ecology Department, EAWAG, Kastanienbaum, Switzerland
| | - Vignesh Dhandapani
- Environmental Genomics Group, School of Biosciences, University of Birmingham, Birmingham, B15 2TT, UK
| | - Antonio Suppa
- Environmental Genomics Group, School of Biosciences, University of Birmingham, Birmingham, B15 2TT, UK
- Department of Chemistry, Life Sciences and Environmental Sustainability University of Parma, Department of Life Sciences, Viale Usberti, 11/A, Parma, Italy
| | - Valeria Rossi
- Department of Chemistry, Life Sciences and Environmental Sustainability University of Parma, Department of Life Sciences, Viale Usberti, 11/A, Parma, Italy
| | - John K Colbourne
- Environmental Genomics Group, School of Biosciences, University of Birmingham, Birmingham, B15 2TT, UK
| | - Luisa Orsini
- Environmental Genomics Group, School of Biosciences, University of Birmingham, Birmingham, B15 2TT, UK.
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21
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Predictability of the impact of multiple stressors on the keystone species Daphnia. Sci Rep 2018; 8:17572. [PMID: 30514958 PMCID: PMC6279757 DOI: 10.1038/s41598-018-35861-y] [Citation(s) in RCA: 26] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/13/2018] [Accepted: 11/08/2018] [Indexed: 11/30/2022] Open
Abstract
Eutrophication and climate change are two of the most pressing environmental issues affecting up to 50% of aquatic ecosystems worldwide. Mitigation strategies to reduce the impact of environmental change are complicated by inherent difficulties of predicting the long-term impact of multiple stressors on natural populations. Here, we investigated the impact of temperature, food levels and carbamate insecticides, in isolation and in combination, on current and historical populations of the freshwater grazer Daphnia. We used common garden and competition experiments on historical and modern populations of D. magna ‘resurrected’ from a lake with known history of anthropogenic eutrophication and documented increase in ambient temperature over time. We found that these populations response dramatically differed between single and multiple stressors. Whereas warming alone induced similar responses among populations, warming combined with insecticides or food limitation resulted in significantly lower fitness in the population historically exposed to pesticides. These results suggest that the negative effect of historical pesticide exposure is magnified in the presence of warming, supporting the hypothesis of synergism between chemical pollution and other stressors.
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