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Zeng Z, Li Y, Zhu M, Wang X, Wang Y, Li A, Chen X, Han Q, Nieuwenhuizen NJ, Ampomah-Dwamena C, Deng X, Cheng Y, Xu Q, Xiao C, Zhang F, Atkinson RG, Zeng Y. Kiwifruit spatiotemporal multiomics networks uncover key tissue-specific regulatory processes throughout the life cycle. PLANT PHYSIOLOGY 2024; 197:kiae567. [PMID: 39673719 DOI: 10.1093/plphys/kiae567] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/13/2024] [Accepted: 09/24/2024] [Indexed: 12/16/2024]
Abstract
Kiwifruit (Actinidia chinensis), a recently commercialized horticultural crop, is rich in various nutrient compounds. However, the regulatory networks controlling the dynamic changes in key metabolites among different tissues remain largely unknown. Here, high-resolution spatiotemporal datasets obtained by ultraperformance liquid chromatography-tandem mass spectrometry methodology and RNA-seq were employed to investigate the dynamic changes in the metabolic and transcriptional landscape of major kiwifruit tissues across different developmental stages, including from fruit skin, outer pericarp, inner pericarp, and fruit core. Kiwifruit spatiotemporal regulatory networks (KSRN) were constructed by integrating the 1,243 identified metabolites and co-expressed genes into 10 different clusters and 11 modules based on their biological functions. These networks allowed the generation of a global map for the major metabolic and transcriptional changes occurring throughout the life cycle of different kiwifruit tissues and discovery of the underlying regulatory networks. KSRN predictions confirmed previously established regulatory networks, including the spatiotemporal accumulation of anthocyanin and ascorbic acid (AsA). More importantly, the networks led to the functional characterization of three transcription factors: an A. chinensis ethylene response factor 1, which negatively controls sugar accumulation and ethylene production by perceiving the ripening signal, a basic-leucine zipper 60 (AcbZIP60) transcription factor, which is involved in the biosynthesis of AsA as part of the L-galactose pathway, and a transcription factor related to apetala 2.4 (RAP2.4), which directly activates the expression of the kiwi fruit aroma terpene synthase gene AcTPS1b. Our findings provide insights into spatiotemporal changes in kiwifruit metabolism and generate a valuable resource for the study of metabolic regulatory processes in kiwifruit as well as other fruits.
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Affiliation(s)
- Zhebin Zeng
- National Key Laboratory for Germplasm Innovation & Utilization of Horticultural Crops, Joint International Research Laboratory of Germplasm Innovation & Utilization of Horticultural Crops, National R&D Centre for Citrus Preservation, College of Horticulture and Forestry Science, Huazhong Agricultural University, Wuhan 430070, P.R. China
| | - Yawei Li
- National Key Laboratory for Germplasm Innovation & Utilization of Horticultural Crops, Joint International Research Laboratory of Germplasm Innovation & Utilization of Horticultural Crops, National R&D Centre for Citrus Preservation, College of Horticulture and Forestry Science, Huazhong Agricultural University, Wuhan 430070, P.R. China
| | - Man Zhu
- National Key Laboratory for Germplasm Innovation & Utilization of Horticultural Crops, Joint International Research Laboratory of Germplasm Innovation & Utilization of Horticultural Crops, National R&D Centre for Citrus Preservation, College of Horticulture and Forestry Science, Huazhong Agricultural University, Wuhan 430070, P.R. China
- College of Horticulture, Xinyang Agriculture and Forestry University, Xinyang 464000, P.R. China
| | - Xiaoyao Wang
- National Key Laboratory for Germplasm Innovation & Utilization of Horticultural Crops, Joint International Research Laboratory of Germplasm Innovation & Utilization of Horticultural Crops, National R&D Centre for Citrus Preservation, College of Horticulture and Forestry Science, Huazhong Agricultural University, Wuhan 430070, P.R. China
| | - Yan Wang
- National Key Laboratory for Germplasm Innovation & Utilization of Horticultural Crops, Joint International Research Laboratory of Germplasm Innovation & Utilization of Horticultural Crops, National R&D Centre for Citrus Preservation, College of Horticulture and Forestry Science, Huazhong Agricultural University, Wuhan 430070, P.R. China
| | - Ang Li
- National Key Laboratory for Germplasm Innovation & Utilization of Horticultural Crops, Joint International Research Laboratory of Germplasm Innovation & Utilization of Horticultural Crops, National R&D Centre for Citrus Preservation, College of Horticulture and Forestry Science, Huazhong Agricultural University, Wuhan 430070, P.R. China
| | - Xiaoya Chen
- National Key Laboratory for Germplasm Innovation & Utilization of Horticultural Crops, Joint International Research Laboratory of Germplasm Innovation & Utilization of Horticultural Crops, National R&D Centre for Citrus Preservation, College of Horticulture and Forestry Science, Huazhong Agricultural University, Wuhan 430070, P.R. China
| | - Qianrong Han
- National Key Laboratory for Germplasm Innovation & Utilization of Horticultural Crops, Joint International Research Laboratory of Germplasm Innovation & Utilization of Horticultural Crops, National R&D Centre for Citrus Preservation, College of Horticulture and Forestry Science, Huazhong Agricultural University, Wuhan 430070, P.R. China
| | - Niels J Nieuwenhuizen
- The New Zealand Institute for Plant and Food Research Ltd (PFR), Private Bag, Auckland 92169, New Zealand
| | - Charles Ampomah-Dwamena
- The New Zealand Institute for Plant and Food Research Ltd (PFR), Private Bag, Auckland 92169, New Zealand
| | - Xiuxin Deng
- National Key Laboratory for Germplasm Innovation & Utilization of Horticultural Crops, Joint International Research Laboratory of Germplasm Innovation & Utilization of Horticultural Crops, National R&D Centre for Citrus Preservation, College of Horticulture and Forestry Science, Huazhong Agricultural University, Wuhan 430070, P.R. China
| | - Yunjiang Cheng
- National Key Laboratory for Germplasm Innovation & Utilization of Horticultural Crops, Joint International Research Laboratory of Germplasm Innovation & Utilization of Horticultural Crops, National R&D Centre for Citrus Preservation, College of Horticulture and Forestry Science, Huazhong Agricultural University, Wuhan 430070, P.R. China
| | - Qiang Xu
- National Key Laboratory for Germplasm Innovation & Utilization of Horticultural Crops, Joint International Research Laboratory of Germplasm Innovation & Utilization of Horticultural Crops, National R&D Centre for Citrus Preservation, College of Horticulture and Forestry Science, Huazhong Agricultural University, Wuhan 430070, P.R. China
| | - Cui Xiao
- Fruit and Tea Research Institute, Hubei Academy of Agricultural Sciences, Wuhan 430064, P.R. China
| | - Fan Zhang
- National Key Laboratory for Germplasm Innovation & Utilization of Horticultural Crops, Joint International Research Laboratory of Germplasm Innovation & Utilization of Horticultural Crops, National R&D Centre for Citrus Preservation, College of Horticulture and Forestry Science, Huazhong Agricultural University, Wuhan 430070, P.R. China
| | - Ross G Atkinson
- The New Zealand Institute for Plant and Food Research Ltd (PFR), Private Bag, Auckland 92169, New Zealand
| | - Yunliu Zeng
- National Key Laboratory for Germplasm Innovation & Utilization of Horticultural Crops, Joint International Research Laboratory of Germplasm Innovation & Utilization of Horticultural Crops, National R&D Centre for Citrus Preservation, College of Horticulture and Forestry Science, Huazhong Agricultural University, Wuhan 430070, P.R. China
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Gariglio N, Reig C, Agustí M. Unraveling water relations in growing fruit: insights from the epidermal growth regulation hypothesis. FRONTIERS IN PLANT SCIENCE 2024; 15:1495916. [PMID: 39735777 PMCID: PMC11671803 DOI: 10.3389/fpls.2024.1495916] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/13/2024] [Accepted: 11/13/2024] [Indexed: 12/31/2024]
Abstract
This review focuses on the intricate water relationships between internal and external tissues in growing fruits within the framework of the epidermal growth control hypothesis. It considers the components of water potential, including turgor pressure and osmotic potential of both internal and external tissues, taking into account factors such as fruit growth rate, sugar accumulation, cell wall metabolism, and climacteric. It also examines the effects of environmental conditions, genetic factors, and physiological influences in modifying water relations. By emphasizing the significance of skin tissue water potential components as indicators of growth stress, the review underlines their importance for a comprehensive understanding of water relations and associated physiological disorders in growing fruit.
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Affiliation(s)
| | - Carmina Reig
- Instituto Agroforestal Mediterráneo, Universitat Politècnica de València, Valencia, Spain
| | - Manuel Agustí
- Instituto Agroforestal Mediterráneo, Universitat Politècnica de València, Valencia, Spain
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3
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Lin X, Wei Q, Zeng L, Zhan M, Li F, Chen J, Ma Q. Osmolytes and CsAQP expression jointly influence water physiology in the peel and pulp of orange ( Citrus sinensis (L.) Osbeck) fruit during postharvest water loss. FRONTIERS IN PLANT SCIENCE 2024; 15:1475574. [PMID: 39507356 PMCID: PMC11539049 DOI: 10.3389/fpls.2024.1475574] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/04/2024] [Accepted: 10/01/2024] [Indexed: 11/08/2024]
Abstract
Water loss is a serious issue affecting the quality of postharvest horticultural products. Aquaporins (AQPs) regulate the transport of water across biological membranes, along the gradient of water potential, and may play a role in water loss. In this study, matured orange fruits (Citrus sinensis) stored at ambinent temperature (RH 85-95%) for 105 d showed that the weight loss persistently increased, and its rate peaked at 45-60 d and 90-105 d. Both water content and potential were higher in the pulp than in the peel. Water content rose before 60 d, and peel water potential fell with an increased gradient after 60 d. Comparing with peel, osmolytes such as soluble sugar, sucrose, glucose, fructose, and organic acids showed higher accumulation, and their levels were the lowest around 60 d. In contrast, soluble protein and inorganic minerals showed low levels of accumulation in the pulp. In total, 31 CsAQP genes were expressed in the fruit, and most of them were down-regulated in the peel but up-regulated in the pulp during storage. These genes were subsequently classified into four clusters based on their expression patterns. Genes in Cluster I - including CsNIP1;1/2;1/2;2/2;3/3;1/4;1/6;1, CsTIP1;3/2;2/2;3/5;1/6;1, CsXIP1;1/1;2, CsSIP1;2, and CsPIP1;2 - were persistently up-regulated in the pulp for the 105 d of storage, especially at day 60, when some genes showed 103-fold higher expression. Pearson's correlation and principal component analysis further revealed a significant positive correlation among weight loss rate, water content, and water potential gradient (R2 = 0.85). Indexes positively correlated with osmolyte content and Cluster I gene expression in pulp samples suggest that increased CsAQP gene expression in pulp is linked to faster water loss in oranges, particularly at 60 days postharvest.
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Affiliation(s)
- Xiong Lin
- Jiangxi Key Laboratory for Postharvest Technology and Nondestructive Testing of Fruits and Vegetables, Collaborative Innovation Center of Postharvest Key Technology and Quality Safety of Fruits and Vegetables, Jiangxi Agricultural University, Nanchang, China
- Citrus Science and Technology Backyard of Jinxian Country, Jiangxi Lufeng Ecological Agriculture Development Co., LTD, Nanchang, China
| | - Qingjiang Wei
- Jiangxi Key Laboratory for Postharvest Technology and Nondestructive Testing of Fruits and Vegetables, Collaborative Innovation Center of Postharvest Key Technology and Quality Safety of Fruits and Vegetables, Jiangxi Agricultural University, Nanchang, China
- Citrus Science and Technology Backyard of Jinxian Country, Jiangxi Lufeng Ecological Agriculture Development Co., LTD, Nanchang, China
| | - Lingcai Zeng
- Jiangxi Key Laboratory for Postharvest Technology and Nondestructive Testing of Fruits and Vegetables, Collaborative Innovation Center of Postharvest Key Technology and Quality Safety of Fruits and Vegetables, Jiangxi Agricultural University, Nanchang, China
- Citrus Science and Technology Backyard of Jinxian Country, Jiangxi Lufeng Ecological Agriculture Development Co., LTD, Nanchang, China
| | - Minxuan Zhan
- Jiangxi Key Laboratory for Postharvest Technology and Nondestructive Testing of Fruits and Vegetables, Collaborative Innovation Center of Postharvest Key Technology and Quality Safety of Fruits and Vegetables, Jiangxi Agricultural University, Nanchang, China
| | - Feng Li
- Jiangxi Key Laboratory for Postharvest Technology and Nondestructive Testing of Fruits and Vegetables, Collaborative Innovation Center of Postharvest Key Technology and Quality Safety of Fruits and Vegetables, Jiangxi Agricultural University, Nanchang, China
- Citrus Science and Technology Backyard of Jinxian Country, Jiangxi Lufeng Ecological Agriculture Development Co., LTD, Nanchang, China
| | - Jinyin Chen
- Jiangxi Key Laboratory for Postharvest Technology and Nondestructive Testing of Fruits and Vegetables, Collaborative Innovation Center of Postharvest Key Technology and Quality Safety of Fruits and Vegetables, Jiangxi Agricultural University, Nanchang, China
| | - Qiaoli Ma
- Jiangxi Key Laboratory for Postharvest Technology and Nondestructive Testing of Fruits and Vegetables, Collaborative Innovation Center of Postharvest Key Technology and Quality Safety of Fruits and Vegetables, Jiangxi Agricultural University, Nanchang, China
- Citrus Science and Technology Backyard of Jinxian Country, Jiangxi Lufeng Ecological Agriculture Development Co., LTD, Nanchang, China
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Xiao H, Verboven P, Tong S, Pedersen O, Nicolaï B. Hypoxia in tomato (Solanum lycopersicum) fruit during ripening: Biophysical elucidation by a 3D reaction-diffusion model. PLANT PHYSIOLOGY 2024; 195:1893-1905. [PMID: 38546393 DOI: 10.1093/plphys/kiae174] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/27/2023] [Accepted: 02/29/2024] [Indexed: 06/30/2024]
Abstract
Respiration provides energy, substrates, and precursors to support physiological changes of the fruit during climacteric ripening. A key substrate of respiration is oxygen that needs to be supplied to the fruit in a passive way by gas transfer from the environment. Oxygen gradients may develop within the fruit due to its bulky size and the dense fruit tissues, potentially creating hypoxia that may have a role in the spatial development of ripening. This study presents a 3D reaction-diffusion model using tomato (Solanum lycopersicum) fruit as a test subject, combining the multiscale fruit geometry generated from magnetic resonance imaging and microcomputed tomography with varying respiration kinetics and contrasting boundary resistances obtained through independent experiments. The model predicted low oxygen levels in locular tissue under atmospheric conditions, and the oxygen level was markedly lower upon scar occlusion, aligning with microsensor profiling results. The locular region was in a hypoxic state, leading to its low aerobic respiration with high CO2 accumulation by fermentative respiration, while the rest of the tissues remained well oxygenated. The model further revealed that the hypoxia is caused by a combination of diffusion resistances and respiration rates of the tissue. Collectively, this study reveals the existence of the respiratory gas gradients and its biophysical causes during tomato fruit ripening, providing richer information for future studies on localized endogenous ethylene biosynthesis and fruit ripening.
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Affiliation(s)
- Hui Xiao
- BIOSYST-MeBioS, KU Leuven, Leuven B-3001, Belgium
| | | | - Shuai Tong
- Freshwater Biological Laboratory, Department of Biology, University of Copenhagen, Copenhagen 2100, Denmark
| | - Ole Pedersen
- Freshwater Biological Laboratory, Department of Biology, University of Copenhagen, Copenhagen 2100, Denmark
| | - Bart Nicolaï
- BIOSYST-MeBioS, KU Leuven, Leuven B-3001, Belgium
- Flanders Centre of Postharvest Technology (VCBT), Leuven B-3001, Belgium
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Zarrouk O, Pinto C, Alarcón MV, Flores-Roco A, Santos L, David TS, Amancio S, Lopes CM, Carvalho LC. Canopy Architecture and Sun Exposure Influence Berry Cluster-Water Relations in the Grapevine Variety Muscat of Alexandria. PLANTS (BASEL, SWITZERLAND) 2024; 13:1500. [PMID: 38891309 PMCID: PMC11174960 DOI: 10.3390/plants13111500] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/30/2024] [Revised: 05/21/2024] [Accepted: 05/23/2024] [Indexed: 06/21/2024]
Abstract
Climate-change-related increases in the frequency and intensity of heatwaves affect viticulture, leading to losses in yield and grape quality. We assessed whether canopy-architecture manipulation mitigates the effects of summer stress in a Mediterranean vineyard. The Vitis vinifera L variety Muscat of Alexandria plants were monitored during 2019-2020. Two canopy shoot-positioning treatments were applied: vertical shoot positioning (VSP) and modulated shoot positioning (MSP). In MSP, the west-side upper foliage was released to promote partial shoot leaning, shading the clusters. Clusters were sampled at pea size (PS), veraison (VER), and full maturation (FM). Measurements included rachis anatomy and hydraulic conductance (Kh) and aquaporins (AQP) and stress-related genes expression in cluster tissues. The results show significant seasonal and interannual differences in Kh and vascular anatomy. At VER, the Kh of the rachis and rachis+pedicel and the xylem diameter decreased but were unaffected by treatments. The phloem-xylem ratio was either increased (2019) or reduced (2020) in MSP compared to VSP. Most AQPs were down-regulated at FM in pedicels and up-regulated at VER in pulp. A potential maturation shift in MSP was observed and confirmed by the up-regulation of several stress-related genes in all tissues. The study pinpoints the role of canopy architecture in berry-water relations and stress response during ripening.
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Affiliation(s)
- Olfa Zarrouk
- LEAF—Linking Landscape, Environment, Agriculture and Food Research Center, Associate Laboratory TERRA, School of Agriculture, University of Lisbon, Tapada da Ajuda, 1349-017 Lisboa, Portugal (S.A.); (C.M.L.)
- IRTA—Institute of Agrifood Research and Technology, Torre Marimon, 08140 Barcelona, Spain
| | - Clara Pinto
- INIAV—Instituto Nacional de Investigação Agrária e Veterinária, I.P. Avenida da República, Quinta do Marquês, 2780-159 Oeiras, Portugal; (C.P.); (T.S.D.)
- CEF—Forest Research Centre, Associate Laboratory TERRA, School of Agriculture, University of Lisbon, Tapada da Ajuda, 1349-017 Lisboa, Portugal
| | - Maria Victoria Alarcón
- Area of Agronomy of Woody and Horticultural Crops, Centro de Investigaciones Científicas y Tecnológicas de Extremadura (CICYTEX), 06187 Badajoz, Spain; (M.V.A.); (A.F.-R.)
| | - Alicia Flores-Roco
- Area of Agronomy of Woody and Horticultural Crops, Centro de Investigaciones Científicas y Tecnológicas de Extremadura (CICYTEX), 06187 Badajoz, Spain; (M.V.A.); (A.F.-R.)
| | - Leonardo Santos
- LEAF—Linking Landscape, Environment, Agriculture and Food Research Center, Associate Laboratory TERRA, School of Agriculture, University of Lisbon, Tapada da Ajuda, 1349-017 Lisboa, Portugal (S.A.); (C.M.L.)
| | - Teresa S. David
- INIAV—Instituto Nacional de Investigação Agrária e Veterinária, I.P. Avenida da República, Quinta do Marquês, 2780-159 Oeiras, Portugal; (C.P.); (T.S.D.)
- CEF—Forest Research Centre, Associate Laboratory TERRA, School of Agriculture, University of Lisbon, Tapada da Ajuda, 1349-017 Lisboa, Portugal
| | - Sara Amancio
- LEAF—Linking Landscape, Environment, Agriculture and Food Research Center, Associate Laboratory TERRA, School of Agriculture, University of Lisbon, Tapada da Ajuda, 1349-017 Lisboa, Portugal (S.A.); (C.M.L.)
| | - Carlos M. Lopes
- LEAF—Linking Landscape, Environment, Agriculture and Food Research Center, Associate Laboratory TERRA, School of Agriculture, University of Lisbon, Tapada da Ajuda, 1349-017 Lisboa, Portugal (S.A.); (C.M.L.)
| | - Luisa C. Carvalho
- LEAF—Linking Landscape, Environment, Agriculture and Food Research Center, Associate Laboratory TERRA, School of Agriculture, University of Lisbon, Tapada da Ajuda, 1349-017 Lisboa, Portugal (S.A.); (C.M.L.)
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Kaneko T, Gould N, Campbell D, Clearwater MJ. Isohydric stomatal behaviour alters fruit vascular flows and minimizes fruit size reductions in drought-stressed 'Hass' avocado (Persea americana Mill.). ANNALS OF BOTANY 2024; 133:969-982. [PMID: 38366557 PMCID: PMC11089262 DOI: 10.1093/aob/mcae024] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/25/2024] [Accepted: 02/12/2024] [Indexed: 02/18/2024]
Abstract
BACKGROUND AND AIMS Plant water status is important for fruit development, because many fleshy fruits contain large amounts of water. However, there is no information on vascular flows of Persea americana 'Hass' avocado. The aims of this research were to explore the impact of drought stress on the water relationships of the 'Hass' avocado plant and its fruit growth. METHODS Well-watered and water-stressed 'Hass' avocado plants were compared. Over 4 weeks, water flows through the shoot and fruit pedicel were monitored using external sap flow gauges. Fruit diameter was monitored using linear transducers, and stomatal conductance (gs), photosynthesis (A) and leaf and stem water potentials (Ѱleaf and Ѱstem) were measured to assess the response of the plants to water supply. KEY RESULTS In well-watered conditions, the average water inflow to the shoot was 72 g day-1. Fruit water inflow was 2.72 g day-1, but there was water loss of 0.37 g day-1 caused by the outflow (loss back into the tree) through the vascular tissues and 1.06 g day-1 from the fruit skin. Overall, fruit volume increased by 1.4 cm3 day-1. In contrast, water flow into fruit of water-stressed plants decreased to 1.88 g day-1, with the outflow increasing to 0.61 g day-1. As a result, increases in fruit volume were reduced to 0.4 cm3 day-1. The values of A, gs and sap flow to shoots were also reduced during drought conditions. Changes in the hourly time-courses of pedicel sap flow, fruit volume and stem water potential during drought suggest that the stomatal response prevented larger increases in outflow from the fruit. Following re-watering, a substantial recovery in growth rate was observed. CONCLUSIONS In summary, a reduction in growth of avocado fruit was observed with induced water deficit, but the isohydric stomatal behaviour of the leaves helped to minimize negative changes in water balance. Also, there was substantial recovery after re-watering, hence the short-term water stress did not decrease avocado fruit size. Negative impacts might appear if the drought treatment were prolonged.
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Affiliation(s)
- Teruko Kaneko
- The New Zealand Institute for Plant and Food Research Ltd, Hawke’s Bay Research Centre, Havelock North, New Zealand
- School of Science, University of Waikato, Hamilton, New Zealand
| | - Nick Gould
- The New Zealand Institute for Plant and Food Research Ltd, Te Puke Research Centre, Te Puke, New Zealand
| | - David Campbell
- School of Science, University of Waikato, Hamilton, New Zealand
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Ievinsh G. Water Content of Plant Tissues: So Simple That Almost Forgotten? PLANTS (BASEL, SWITZERLAND) 2023; 12:plants12061238. [PMID: 36986926 PMCID: PMC10058729 DOI: 10.3390/plants12061238] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/09/2023] [Revised: 03/06/2023] [Accepted: 03/06/2023] [Indexed: 06/12/2023]
Abstract
The aim of the present review was to reconsider basic information about various functional aspects related to plant water content and provide evidence that the usefulness of measuring absolute water content in plant sciences is undervalued. First, general questions about water status in plants as well as methods for determining water content and their associated problems were discussed. After a brief overview of the structural organization of water in plant tissues, attention was paid to the water content of different parts of plants. Looking at the influence of environmental factors on plant water status, the differences caused by air humidity, mineral supply, biotic effects, salinity, and specific life forms (clonal and succulent plants) were analyzed. Finally, it was concluded that the expression of absolute water content on a dry biomass basis makes easily noticeable functional sense, but the physiological meaning and ecological significance of the drastic differences in plant water content need to be further elucidated.
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Affiliation(s)
- Gederts Ievinsh
- Department of Plant Physiology, Faculty of Biology, University of Latvia, 1 Jelgavas Str., LV-1004 Rīga, Latvia
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Genome-Wide Identification and Expression Analysis of the Aquaporin Gene Family in Lycium barbarum during Fruit Ripening and Seedling Response to Heat Stress. Curr Issues Mol Biol 2022; 44:5933-5948. [PMID: 36547065 PMCID: PMC9777030 DOI: 10.3390/cimb44120404] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/19/2022] [Revised: 11/03/2022] [Accepted: 11/10/2022] [Indexed: 11/29/2022] Open
Abstract
Plant−water relations mediated by aquaporins (AQPs) play vital roles in both key plant growth processes and responses to environmental challenges. As a well-known medicinal and edible plant, the harsh natural growth habitat endows Lycium plants with ideal materials for stress biology research. However, the details of their molecular switch for water transport remain unclear. In the present work, we first identified and characterized AQP family genes from Lycium (L.) barbarum at the genome scale and conducted systemic bioinformatics and expression analyses. The results showed that there were 38 Lycium barbarum AQPs (LbAQPs) in L. barbarum, which were classified into four subfamilies, including 17 LbPIP, 9 LbTIP, 10 LbNIP, and 2 LbXIP. Their encoded genes were unevenly distributed on all 12 chromosomes, except chromosome 10. Three of these genes encoded truncated proteins and three genes underwent clear gene duplication events. Cis-acting element analysis indicated that the expression of LbAQPs may be mainly regulated by biotic/abiotic stress, phytohormones and light. The qRT-PCR assay indicated that this family of genes presented a clear tissue-specific expression pattern, in which most of the genes had maximal transcript levels in roots, stems, and leaves, while there were relatively lower levels in flowers and fruits. Most of the LbAQP genes were downregulated during L. barbarum fruit ripening and presented a negative correlation with the fruit relative water content (RWC). Most of their transcripts presented a quick and sharp upregulation response to heat stress following exposure of the 2-month-old seedlings to a 42 °C temperature for 0, 1, 3, 12, or 24 h. Our results proposed that LbAQPs were involved in L. barbarum key development events and abiotic stress responses, which may lay a foundation for further studying the molecular mechanism of the water relationship of Lycium plants, especially in harsh environments.
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García-Coronado H, Tafolla-Arellano JC, Hernández-Oñate MÁ, Burgara-Estrella AJ, Robles-Parra JM, Tiznado-Hernández ME. Molecular Biology, Composition and Physiological Functions of Cuticle Lipids in Fleshy Fruits. PLANTS (BASEL, SWITZERLAND) 2022; 11:plants11091133. [PMID: 35567134 PMCID: PMC9099731 DOI: 10.3390/plants11091133] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/24/2022] [Revised: 04/09/2022] [Accepted: 04/12/2022] [Indexed: 05/27/2023]
Abstract
Fleshy fruits represent a valuable resource of economic and nutritional relevance for humanity. The plant cuticle is the external lipid layer covering the nonwoody aerial organs of land plants, and it is the first contact between fruits and the environment. It has been hypothesized that the cuticle plays a role in the development, ripening, quality, resistance to pathogen attack and postharvest shelf life of fleshy fruits. The cuticle's structure and composition change in response to the fruit's developmental stage, fruit physiology and different postharvest treatments. This review summarizes current information on the physiology and molecular mechanism of cuticle biosynthesis and composition changes during the development, ripening and postharvest stages of fleshy fruits. A discussion and analysis of studies regarding the relationship between cuticle composition, water loss reduction and maintaining fleshy fruits' postharvest quality are presented. An overview of the molecular mechanism of cuticle biosynthesis and efforts to elucidate it in fleshy fruits is included. Enhancing our knowledge about cuticle biosynthesis mechanisms and identifying specific transcripts, proteins and lipids related to quality traits in fleshy fruits could contribute to the design of biotechnological strategies to improve the quality and postharvest shelf life of these important fruit crops.
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Affiliation(s)
- Heriberto García-Coronado
- Coordinación de Tecnología de Alimentos de Origen Vegetal, Centro de Investigación en Alimentación y Desarrollo A.C., Carretera Gustavo Enrique Astiazarán Rosas 46, Hermosillo 83304, Sonora, Mexico;
| | - Julio César Tafolla-Arellano
- Laboratorio de Biotecnología y Biología Molecular, Departamento de Ciencias Básicas, Universidad Autónoma Agraria Antonio Narro, Calzada Antonio Narro 1923, Buenavista, Saltillo 25315, Coahuila, Mexico;
| | - Miguel Ángel Hernández-Oñate
- CONACYT-Coordinación de Tecnología de Alimentos de Origen Vegetal, Centro de Investigación en Alimentación y Desarrollo A.C., Carretera Gustavo Enrique Astiazarán Rosas 46, Hermosillo 83304, Sonora, Mexico;
| | - Alexel Jesús Burgara-Estrella
- Departamento de Investigación en Física, Universidad de Sonora, Blvd. Luis Encinas y Rosales S/N, Hermosillo 83000, Sonora, Mexico;
| | - Jesús Martín Robles-Parra
- Coordinación de Desarrollo Regional, Centro de Investigación en Alimentación y Desarrollo A.C., Carretera Gustavo Enrique Astiazarán Rosas 46, Hermosillo 83304, Sonora, Mexico;
| | - Martín Ernesto Tiznado-Hernández
- Coordinación de Tecnología de Alimentos de Origen Vegetal, Centro de Investigación en Alimentación y Desarrollo A.C., Carretera Gustavo Enrique Astiazarán Rosas 46, Hermosillo 83304, Sonora, Mexico;
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Ma L, Zeng N, Cheng K, Li J, Wang K, Zhang C, Zhu H. Changes in fruit pigment accumulation, chloroplast development, and transcriptome analysis in the CRISPR/Cas9-mediated knockout of Stay-green 1 (slsgr1) mutant. FOOD QUALITY AND SAFETY 2021. [DOI: 10.1093/fqsafe/fyab029] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]
Abstract
Abstract
The green-flesh (gf) mutant of the tomato fruit ripen to a muddy brown color and has been demonstrated previously to be a loss-of-function mutant. Here, we provide more evidence to support this view that SlSGR1 is involved in color change in ripening tomato fruits. Knocking out SlSGR1 expression using a clustered regularly interspaced short palindromic repeats (CRISPR)/CRISPR-associated protein 9 genome editing strategy showed obviously a muddy brown color with significantly higher chlorophyll and carotenoid content compared with wild-type (WT) fruits. To further verify the role of SlSGR1 in fruit color change, we performed transcriptome deep sequencing (RNA-seq) analysis, where a total of 354 differentially expressed genes (124/230 downregulated/upregulated) were identified between WT and slsgr1. Additionally, the expression of numerous genes associated with photosynthesis and chloroplast function changed significantly when SlSGR1 was knocked out. Taken together, these results indicate that SlSGR1 is involved in color change in ripening fruit via chlorophyll degradation and carotenoid biosynthesis.
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