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Tomlinson S, Lomolino MV, Wood JR, Anderson A, Brown SC, Haythorne S, Perry GLW, Wilmshurst JM, Austin JJ, Fordham DA. Ecological dynamics of moa extinctions reveal convergent refugia that today harbour flightless birds. Nat Ecol Evol 2024; 8:1472-1481. [PMID: 39048729 DOI: 10.1038/s41559-024-02449-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2023] [Accepted: 05/29/2024] [Indexed: 07/27/2024]
Abstract
Human settlement of islands across the Pacific Ocean was followed by waves of faunal extinctions that occurred so rapidly that their dynamics are difficult to reconstruct in space and time. These extinctions included large, wingless birds called moa that were endemic to New Zealand. Here we reconstructed the range and extinction dynamics of six genetically distinct species of moa across New Zealand at a fine spatiotemporal resolution, using hundreds of thousands of process-explicit simulations of climate-human-moa interactions, which were validated against inferences of occurrence and range contraction from an extensive fossil record. These process-based simulations revealed important interspecific differences in the ecological and demographic attributes of moa and established how these differences influenced likely trajectories of geographic and demographic declines of moa following Polynesian colonization of New Zealand. We show that despite these interspecific differences in extinction dynamics, the spatial patterns of geographic range collapse of moa species were probably similar. It is most likely that the final populations of all moa species persisted in suboptimal habitats in cold, mountainous areas that were generally last and least impacted by people. We find that these refugia for the last populations of moa continue to serve as isolated sanctuaries for New Zealand's remaining flightless birds, providing fresh insights for conserving endemic species in the face of current and future threats.
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Affiliation(s)
- Sean Tomlinson
- School of Biological Sciences, University of Adelaide, Adelaide, South Australia, Australia.
| | - Mark V Lomolino
- College of Environmental Science and Forestry, State University of New York, Syracuse, NY, USA
| | - Jamie R Wood
- School of Biological Sciences, University of Adelaide, Adelaide, South Australia, Australia
- The Environment Institute, University of Adelaide, Adelaide, South Australia, Australia
| | - Atholl Anderson
- School of Culture, History and Language, Australian National University, Canberra, Australian Capital Territory, Australia
| | - Stuart C Brown
- School of Biological Sciences, University of Adelaide, Adelaide, South Australia, Australia
| | - Sean Haythorne
- Centre of Excellence for Biosecurity Risk Analysis, University of Melbourne, Parkville, Victoria, Australia
| | - George L W Perry
- School of Environment, University of Auckland, Auckland, New Zealand
| | - Janet M Wilmshurst
- Ecosystems & Conservation, Manaaki Whenua - Landcare Research, Lincoln, New Zealand
| | - Jeremy J Austin
- School of Biological Sciences, University of Adelaide, Adelaide, South Australia, Australia
| | - Damien A Fordham
- School of Biological Sciences, University of Adelaide, Adelaide, South Australia, Australia.
- The Environment Institute, University of Adelaide, Adelaide, South Australia, Australia.
- Center for Macroecology, Evolution, and Climate, GLOBE Institute, University of Copenhagen, Copenhagen, Denmark.
- Center for Global Mountain Biodiversity, GLOBE Institute, University of Copenhagen, Copenhagen, Denmark.
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2
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Llorente-Culebras S, Carmona CP, Carvalho WD, Menegotto A, Molina-Venegas R, Ladle RJ, Santos AMC. Island biodiversity in peril: Anticipating a loss of mammals' functional diversity with future species extinctions. GLOBAL CHANGE BIOLOGY 2024; 30:e17375. [PMID: 38895806 DOI: 10.1111/gcb.17375] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/08/2024] [Revised: 05/10/2024] [Accepted: 05/16/2024] [Indexed: 06/21/2024]
Abstract
Islands are biodiversity hotspots that host unique assemblages. However, a substantial proportion of island species are threatened and their long-term survival is uncertain. Identifying and preserving vulnerable species has become a priority, but it is also essential to combine this information with other facets of biodiversity like functional diversity, to understand how future extinctions might affect ecosystem stability and functioning. Focusing on mammals, we (i) assessed how much functional space would be lost if threatened species go extinct, (ii) determined the minimum number of extinctions that would cause a significant functional loss, (iii) identified the characteristics (e.g., biotic, climatic, geographic, or orographic) of the islands most vulnerable to future changes in the functional space, and (iv) quantified how much of that potential functional loss would be offset by introduced species. Using trait information for 1474 mammal species occurring in 318 islands worldwide, we built trait probability density functions to quantify changes in functional richness and functional redundancy in each island if the mammals categorized by IUCN as threatened disappeared. We found that the extinction of threatened mammals would reduce the functional space in 63% of the assessed islands, although these extinctions in general would cause a reduction of less than 15% of their overall functional space. Also, on most islands, the extinction of just a few species would be sufficient to cause a significant loss of functional diversity. The potential functional loss would be higher on small, isolated, and/or species-rich islands, and, in general, the functional space lost would not be offset by introduced species. Our results show that the preservation of native species and their ecological roles remains crucial for maintaining the current functioning of island ecosystems. Therefore, conservation measures considering functional diversity are imperative to safeguard the unique functional roles of threatened mammal species on islands.
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Affiliation(s)
- Sonia Llorente-Culebras
- Terrestrial Ecology Group (TEG-UAM), Departamento de Ecología, Universidad Autónoma de Madrid, Madrid, Spain
- Centro de Investigación en Biodiversidad y Cambio Global (CIBC-UAM), Universidad Autónoma de Madrid, Madrid, Spain
| | - Carlos P Carmona
- Institute of Ecology and Earth Sciences, University of Tartu, Tartu, Estonia
| | - William D Carvalho
- Terrestrial Ecology Group (TEG-UAM), Departamento de Ecología, Universidad Autónoma de Madrid, Madrid, Spain
- Centro de Investigación en Biodiversidad y Cambio Global (CIBC-UAM), Universidad Autónoma de Madrid, Madrid, Spain
- Programa de Pós-Graduação em Biodiversidade Tropical, Universidade Federal do Amapá, Macapá, Brazil
| | - André Menegotto
- Terrestrial Ecology Group (TEG-UAM), Departamento de Ecología, Universidad Autónoma de Madrid, Madrid, Spain
- Centro de Investigación en Biodiversidad y Cambio Global (CIBC-UAM), Universidad Autónoma de Madrid, Madrid, Spain
| | - Rafael Molina-Venegas
- Terrestrial Ecology Group (TEG-UAM), Departamento de Ecología, Universidad Autónoma de Madrid, Madrid, Spain
- Centro de Investigación en Biodiversidad y Cambio Global (CIBC-UAM), Universidad Autónoma de Madrid, Madrid, Spain
| | - Richard J Ladle
- Institute of Biological and Health Sciences, Federal University of Alagoas, Maceió, Brazil
| | - Ana M C Santos
- Terrestrial Ecology Group (TEG-UAM), Departamento de Ecología, Universidad Autónoma de Madrid, Madrid, Spain
- Centro de Investigación en Biodiversidad y Cambio Global (CIBC-UAM), Universidad Autónoma de Madrid, Madrid, Spain
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3
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Marino C, Journiac L, Liu C, Jeschke JM, Bellard C. The anthropocene biogeography of alien birds on islands: Drivers of their functional and phylogenetic diversities. Ecol Lett 2024; 27:e14465. [PMID: 38934685 DOI: 10.1111/ele.14465] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/07/2023] [Revised: 04/29/2024] [Accepted: 06/02/2024] [Indexed: 06/28/2024]
Abstract
A branch of island biogeography has emerged to explain alien species diversity in the light of the biogeographic and anthropogenic context, yet overlooking the functional and phylogenetic facets. Evaluating alien and native birds of 407 oceanic islands worldwide, we built structural equation models to assess the direct and indirect influence of biotic, geographic, and anthropogenic contexts on alien functional diversity (FD) and phylogenetic diversity (PD). We found that alien taxonomic richness was the main predictor of both diversities. Anthropogenic factors, including colonization pressure, associated with classic biogeographical variables also strongly influenced alien FD and PD. Specifically, habitat modification and human connectivity markedly drove alien FD, especially when controlled by taxonomic richness, whereas the human population size, gross domestic product, and native PD were crucial at explaining alien PD. Our findings suggest that humans not only shape taxonomic richness but also other facets of alien diversity in a complex way.
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Affiliation(s)
- Clara Marino
- Université Paris-Saclay, CNRS, AgroParisTech, Ecologie Systématique Evolution, Gif-sur-Yvette, France
- FRB-Cesab, Montpellier, France
| | - Lysandre Journiac
- Université Paris-Saclay, CNRS, AgroParisTech, Ecologie Systématique Evolution, Gif-sur-Yvette, France
| | - Chunlong Liu
- The Key Laboratory of Mariculture, Ministry of Education, College of Fisheries, Ocean University of China, Qingdao, China
| | - Jonathan M Jeschke
- Leibniz Institute of Freshwater Ecology and Inland Fisheries (IGB), Berlin, Germany
- Institute of Biology, Freie Universität Berlin, Berlin, Germany
- Berlin-Brandenburg Institute of Advanced Biodiversity Research (BBIB), Berlin, Germany
| | - Céline Bellard
- Université Paris-Saclay, CNRS, AgroParisTech, Ecologie Systématique Evolution, Gif-sur-Yvette, France
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4
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Li J, Jiang H, Xie M, Song C, He C, Bian H, Sheng L. Functional characteristics and habitat suitability of threatened birds in northeastern China. Ecol Evol 2024; 14:e11550. [PMID: 38932959 PMCID: PMC11199129 DOI: 10.1002/ece3.11550] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/16/2023] [Revised: 04/08/2024] [Accepted: 05/26/2024] [Indexed: 06/28/2024] Open
Abstract
Northeast China, rich in natural resources and diverse biodiversity, boasts a unique habitat for threatened bird species due to its remote location and perennial cold climate. An analysis assessed the adaptability of these species using data on their geographic distribution and functional traits collected through database queries. The results revealed that threatened bird species share similar functional traits and a stronger phylogenetic signal (Blomberg mean K = 0.39) compared to common species. The Biomod2 model analyzed potentially suitable ranges and environmental drivers under current and future climate scenarios, showing a pattern of larger suitable areas in southern regions and smaller suitable areas in the north. The most critically threatened species faced greater geographical constraints (0.989), with mean annual temperature being a key influence. Altitude and water system distribution were also key factors impacting the distribution of other threatened bird species. Simulated projections under different climate scenarios (RCP 45 and 85) indicated varying degrees of expansion in the suitable range for these species. This research sheds light on the functional traits and distribution of threatened bird species in Northeast China, providing a scientific foundation for future conservation and management efforts.
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Affiliation(s)
- Jianwei Li
- State Environmental Protection Key Laboratory of Wetland Ecology and Vegetation Restoration, School of EnvironmentNortheast Normal UniversityChangchunChina
| | - Haibo Jiang
- State Environmental Protection Key Laboratory of Wetland Ecology and Vegetation Restoration, School of EnvironmentNortheast Normal UniversityChangchunChina
| | - Mingjun Xie
- State Environmental Protection Key Laboratory of Wetland Ecology and Vegetation Restoration, School of EnvironmentNortheast Normal UniversityChangchunChina
| | - Chuantao Song
- State Environmental Protection Key Laboratory of Wetland Ecology and Vegetation Restoration, School of EnvironmentNortheast Normal UniversityChangchunChina
| | - Chunguang He
- State Environmental Protection Key Laboratory of Wetland Ecology and Vegetation Restoration, School of EnvironmentNortheast Normal UniversityChangchunChina
| | - Hongfeng Bian
- State Environmental Protection Key Laboratory of Wetland Ecology and Vegetation Restoration, School of EnvironmentNortheast Normal UniversityChangchunChina
| | - Lianxi Sheng
- State Environmental Protection Key Laboratory of Wetland Ecology and Vegetation Restoration, School of EnvironmentNortheast Normal UniversityChangchunChina
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5
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Pozsgai G, Lhoumeau S, Amorim IR, Boieiro M, Cardoso P, Costa R, Ferreira MT, Leite A, Malumbres-Olarte J, Oyarzabal G, Rigal F, Ros-Prieto A, Santos AMC, Gabriel R, Borges PAV. The BALA project: A pioneering monitoring of Azorean forest invertebrates over two decades (1999-2022). Sci Data 2024; 11:368. [PMID: 38605058 PMCID: PMC11009236 DOI: 10.1038/s41597-024-03174-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2024] [Accepted: 03/21/2024] [Indexed: 04/13/2024] Open
Abstract
Globally, there is a concerning decline in many insect populations, and this trend likely extends to all arthropods, potentially impacting unique island biota. Native non-endemic and endemic species on islands are under threat due to habitat destruction, with the introduction of exotic, and potentially invasive, species, further contributing to this decline. While long-term studies of plants and vertebrate fauna are available, long-term arthropod datasets are limited, hindering comparisons with better-studied taxa. The Biodiversity of Arthropods of the Laurisilva of the Azores (BALA) project has allowed gathering comprehensive data since 1997 in the Azorean Islands (Portugal), using standardised sampling methods across islands. The dataset includes arthropod counts from epigean (pitfall traps) and canopy-dwelling (beating samples) communities, enriched with species information, biogeographic origins, and IUCN categories. Metadata associated with the sample protocol and events, like sample identifier, archive number, sampled tree species, and trap type are also recorded. The database is available in multiple formats, including Darwin Core, which facilitates the ecological analysis of pressing environmental concerns, such as arthropod population declines and biological invasions.
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Affiliation(s)
- Gabor Pozsgai
- cE3c - Centre for Ecology, Evolution and Environmental Changes & CHANGE - Global Change and Sustainability Institute, Faculty of Agricultural Sciences and Environment, University of the Azores, Rua Capitão João d´Ávila, Pico da Urze, 9700-042, Angra do Heroísmo, Portugal.
| | - Sébastien Lhoumeau
- cE3c - Centre for Ecology, Evolution and Environmental Changes & CHANGE - Global Change and Sustainability Institute, Faculty of Agricultural Sciences and Environment, University of the Azores, Rua Capitão João d´Ávila, Pico da Urze, 9700-042, Angra do Heroísmo, Portugal
| | - Isabel R Amorim
- cE3c - Centre for Ecology, Evolution and Environmental Changes & CHANGE - Global Change and Sustainability Institute, Faculty of Agricultural Sciences and Environment, University of the Azores, Rua Capitão João d´Ávila, Pico da Urze, 9700-042, Angra do Heroísmo, Portugal
- IUCN SSC Atlantic Islands Invertebrates Specialist Group, 9700-042, Angra do Heroísmo, Azores, Portugal
| | - Mário Boieiro
- cE3c - Centre for Ecology, Evolution and Environmental Changes & CHANGE - Global Change and Sustainability Institute, Faculty of Agricultural Sciences and Environment, University of the Azores, Rua Capitão João d´Ávila, Pico da Urze, 9700-042, Angra do Heroísmo, Portugal
- IUCN SSC Atlantic Islands Invertebrates Specialist Group, 9700-042, Angra do Heroísmo, Azores, Portugal
| | - Pedro Cardoso
- cE3c- Centre for Ecology, Evolution and Environmental Changes, CHANGE - Global Change and Sustainability Institute, Faculty of Sciences, University of Lisbon, Lisbon, Portugal
- LIBRe - Laboratory for Integrative Biodiversity Research, Finnish Museum of Natural History, University of Helsinki, P.O.Box 17 (Pohjoinen Rautatiekatu 13), 00014, Helsinki, Finland
| | - Ricardo Costa
- cE3c - Centre for Ecology, Evolution and Environmental Changes & CHANGE - Global Change and Sustainability Institute, Faculty of Agricultural Sciences and Environment, University of the Azores, Rua Capitão João d´Ávila, Pico da Urze, 9700-042, Angra do Heroísmo, Portugal
- LIBRe - Laboratory for Integrative Biodiversity Research, Finnish Museum of Natural History, University of Helsinki, P.O.Box 17 (Pohjoinen Rautatiekatu 13), 00014, Helsinki, Finland
| | - Maria Teresa Ferreira
- Regional Secretariat of Environment and Climate Change, Project LIFE BEETLES (LIFE 18NAT/PT/000864), Rua do Galo n118, 9700-040, Angra do Heroísmo, Azores, Portugal
| | - Abrão Leite
- Rua Fernando Pessoa, n°99 R/C DTO 2765-483, Estoril, Portugal
| | - Jagoba Malumbres-Olarte
- cE3c - Centre for Ecology, Evolution and Environmental Changes & CHANGE - Global Change and Sustainability Institute, Faculty of Agricultural Sciences and Environment, University of the Azores, Rua Capitão João d´Ávila, Pico da Urze, 9700-042, Angra do Heroísmo, Portugal
- LIBRe - Laboratory for Integrative Biodiversity Research, Finnish Museum of Natural History, University of Helsinki, P.O.Box 17 (Pohjoinen Rautatiekatu 13), 00014, Helsinki, Finland
| | - Guilherme Oyarzabal
- cE3c - Centre for Ecology, Evolution and Environmental Changes & CHANGE - Global Change and Sustainability Institute, Faculty of Agricultural Sciences and Environment, University of the Azores, Rua Capitão João d´Ávila, Pico da Urze, 9700-042, Angra do Heroísmo, Portugal
| | - François Rigal
- cE3c - Centre for Ecology, Evolution and Environmental Changes & CHANGE - Global Change and Sustainability Institute, Faculty of Agricultural Sciences and Environment, University of the Azores, Rua Capitão João d´Ávila, Pico da Urze, 9700-042, Angra do Heroísmo, Portugal
- Institut Des Sciences Analytiques et de Physico Chimie pour L'environnement et les Materiaux UMR5254, Comité National de la Recherche Scientifique - University de Pau et des Pays de l'Adour - E2S UPPA, Pau, France
| | - Alejandra Ros-Prieto
- cE3c - Centre for Ecology, Evolution and Environmental Changes & CHANGE - Global Change and Sustainability Institute, Faculty of Agricultural Sciences and Environment, University of the Azores, Rua Capitão João d´Ávila, Pico da Urze, 9700-042, Angra do Heroísmo, Portugal
| | - Ana M C Santos
- cE3c - Centre for Ecology, Evolution and Environmental Changes & CHANGE - Global Change and Sustainability Institute, Faculty of Agricultural Sciences and Environment, University of the Azores, Rua Capitão João d´Ávila, Pico da Urze, 9700-042, Angra do Heroísmo, Portugal
- Terrestrial Ecology Group (TEG-UAM), Departamento de Ecología, Universidad Autónoma de Madrid, 28049, Madrid, Spain
- Centro de Investigación en Biodiversidad y Cambio Global (CIBC-UAM), Universidad Autónoma de Madrid, 28049, Madrid, Spain
| | - Rosalina Gabriel
- cE3c - Centre for Ecology, Evolution and Environmental Changes & CHANGE - Global Change and Sustainability Institute, Faculty of Agricultural Sciences and Environment, University of the Azores, Rua Capitão João d´Ávila, Pico da Urze, 9700-042, Angra do Heroísmo, Portugal
| | - Paulo A V Borges
- cE3c - Centre for Ecology, Evolution and Environmental Changes & CHANGE - Global Change and Sustainability Institute, Faculty of Agricultural Sciences and Environment, University of the Azores, Rua Capitão João d´Ávila, Pico da Urze, 9700-042, Angra do Heroísmo, Portugal
- IUCN SSC Atlantic Islands Invertebrates Specialist Group, 9700-042, Angra do Heroísmo, Azores, Portugal
- IUCN SSC Species Monitoring Specialist Group, 9700-042, Angra do Heroísmo, Azores, Portugal
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6
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Aulus-Giacosa L, Ollier S, Bertelsmeier C. Non-native ants are breaking down biogeographic boundaries and homogenizing community assemblages. Nat Commun 2024; 15:2266. [PMID: 38480710 PMCID: PMC10937723 DOI: 10.1038/s41467-024-46359-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2023] [Accepted: 02/23/2024] [Indexed: 03/17/2024] Open
Abstract
As geographic distance increases, species assemblages become more distinct, defining global biogeographic realms with abrupt biogeographic boundaries. Yet, it remains largely unknown to what extent these realms may change because of human-mediated dispersal of species. Focusing on the distributions of 309 non-native ant species, we show that historical biogeographic patterns have already broken down into tropical versus non-tropical regions. Importantly, we demonstrate that these profound changes are not limited to the distribution patterns of non-native ants but fundamentally alter biogeographic boundaries of all ant biodiversity (13,774 species). In total, 52% of ant assemblages have become more similar, supporting a global trend of biotic homogenization. Strikingly, this trend was strongest on islands and in the tropics, which harbor some of the most vulnerable ecosystems. Overall, we show that the pervasive anthropogenic impacts on biodiversity override biogeographic patterns resulting from millions of years of evolution, and disproportionally affect particular regions.
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Affiliation(s)
- Lucie Aulus-Giacosa
- Department of Ecology and Evolution, Biophore, UNIL - Sorge, University of Lausanne, 1015, Lausanne, Switzerland.
| | - Sébastien Ollier
- Department of Ecology and Evolution, Biophore, UNIL - Sorge, University of Lausanne, 1015, Lausanne, Switzerland
- Université Paris - Saclay, CNRS, AgroParisTech, Ecologie Systématique Evolution, 91405, Orsay, France
| | - Cleo Bertelsmeier
- Department of Ecology and Evolution, Biophore, UNIL - Sorge, University of Lausanne, 1015, Lausanne, Switzerland.
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7
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Strandberg NA, Steinbauer MJ, Walentowitz A, Gosling WD, Fall PL, Prebble M, Stevenson J, Wilmshurst JM, Sear DA, Langdon PG, Edwards ME, Nogué S. Floristic homogenization of South Pacific islands commenced with human arrival. Nat Ecol Evol 2024; 8:511-518. [PMID: 38225430 DOI: 10.1038/s41559-023-02306-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/10/2023] [Accepted: 12/07/2023] [Indexed: 01/17/2024]
Abstract
The increasing similarity of plant species composition among distinct areas is leading to the homogenization of ecosystems globally. Human actions such as ecosystem modification, the introduction of non-native plant species and the extinction or extirpation of endemic and native plant species are considered the main drivers of this trend. However, little is known about when floristic homogenization began or about pre-human patterns of floristic similarity. Here we investigate vegetation trends during the past 5,000 years across the tropical, sub-tropical and warm temperate South Pacific using fossil pollen records from 15 sites on 13 islands within the biogeographical realm of Oceania. The site comparisons show that floristic homogenization has increased over the past 5,000 years. Pairwise Bray-Curtis similarity results also show that when two islands were settled by people in a given time interval, their floristic similarity is greater than when one or neither of the islands were settled. Importantly, higher elevation sites, which are less likely to have experienced human impacts, tended to show less floristic homogenization. While biotic homogenization is often referred to as a contemporary issue, we have identified a much earlier trend, likely driven by human colonization of the islands and subsequent impacts.
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Affiliation(s)
- Nichola A Strandberg
- School of Geography and Environmental Science, University of Southampton, Highfield, Southampton, UK.
| | - Manuel J Steinbauer
- Bayreuth Center of Ecology and Environmental Research (BayCEER) and Bayreuth Center for Sport Science (BaySpo), University of Bayreuth, Bayreuth, Germany.
- Department of Biological Sciences and Bjerknes Bergen, Bergen, Norway.
| | - Anna Walentowitz
- Department of Biogeography, University of Bayreuth, Bayreuth, Germany
| | - William D Gosling
- Department of Ecosystem and Landscape Dynamics, Institute for Biodiversity and Ecosystem Dynamics, University of Amsterdam, Amsterdam, The Netherlands
| | - Patricia L Fall
- Department of Geography and Earth Sciences, University of North Carolina at Charlotte, Charlotte, NC, USA
| | - Matiu Prebble
- School of Earth and Environment, University of Canterbury, Christchurch, New Zealand
- School of Culture, History and Language, ANU College of Asia and the Pacific, Australian National University, Canberra, Australian Capital Territory, Australia
| | - Janelle Stevenson
- School of Culture, History and Language, ANU College of Asia and the Pacific, Australian National University, Canberra, Australian Capital Territory, Australia
- ARC Centre of Excellence for Australian Biodiversity and Heritage, Australian National University, Canberra, Australian Capital Territory, Australia
| | - Janet M Wilmshurst
- Long-term Ecology Laboratory, Manaaki Whenua-Landcare Research, Lincoln, New Zealand
| | - David A Sear
- School of Geography and Environmental Science, University of Southampton, Highfield, Southampton, UK
| | - Peter G Langdon
- School of Geography and Environmental Science, University of Southampton, Highfield, Southampton, UK
| | - Mary E Edwards
- School of Geography and Environmental Science, University of Southampton, Highfield, Southampton, UK
| | - Sandra Nogué
- Universitat Autònoma de Barcelona, Bellaterra (Cerdanyola del Vallès), Catalonia, Spain.
- CREAF, Bellaterra (Cerdanyola del Vallès), Catalonia, Spain.
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8
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Toussaint A, Pärtel M, Carmona CP. Contrasting impacts of non-native and threatened species on morphological, life history, and phylogenetic diversity in bird assemblages. Ecol Lett 2024; 27:e14373. [PMID: 38344890 DOI: 10.1111/ele.14373] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/14/2023] [Revised: 12/11/2023] [Accepted: 01/04/2024] [Indexed: 02/15/2024]
Abstract
Human activities have altered the species composition of assemblages through introductions and extinctions, but it remains unclear how those changes can affect the different facets of biodiversity. Here we assessed the impact of changes in species composition on taxonomic, functional, and phylogenetic diversity across 281 bird assemblages worldwide. To provide a more nuanced understanding of functional diversity, we distinguished morphological from life-history traits. We showed that shifts in species composition could trigger a global decline in avian biodiversity due to the high number of potential extinctions. Moreover, these extinctions were not random but unique in terms of function and phylogeny at the regional level. Our findings demonstrated that non-native species cannot compensate for these losses, as they are both morphologically and phylogenetically close to the native fauna. In the context of the ongoing biodiversity crisis, such alterations in the functional and phylogenetic structure of bird assemblages could heighten ecosystem vulnerability.
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Affiliation(s)
- Aurele Toussaint
- Institute of Ecology and Earth Sciences, University of Tartu, Tartu, Estonia
| | - Meelis Pärtel
- Institute of Ecology and Earth Sciences, University of Tartu, Tartu, Estonia
| | - Carlos P Carmona
- Institute of Ecology and Earth Sciences, University of Tartu, Tartu, Estonia
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9
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Emerson BC, Borges PAV, Cardoso P, Convey P, deWaard JR, Economo EP, Gillespie RG, Kennedy S, Krehenwinkel H, Meier R, Roderick GK, Strasberg D, Thébaud C, Traveset A, Creedy TJ, Meramveliotakis E, Noguerales V, Overcast I, Morlon H, Papadopoulou A, Vogler AP, Arribas P, Andújar C. Collective and harmonized high throughput barcoding of insular arthropod biodiversity: Toward a Genomic Observatories Network for islands. Mol Ecol 2023; 32:6161-6176. [PMID: 36156326 DOI: 10.1111/mec.16683] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/14/2022] [Revised: 08/11/2022] [Accepted: 08/19/2022] [Indexed: 12/01/2022]
Abstract
Current understanding of ecological and evolutionary processes underlying island biodiversity is heavily shaped by empirical data from plants and birds, although arthropods comprise the overwhelming majority of known animal species, and as such can provide key insights into processes governing biodiversity. Novel high throughput sequencing (HTS) approaches are now emerging as powerful tools to overcome limitations in the availability of arthropod biodiversity data, and hence provide insights into these processes. Here, we explored how these tools might be most effectively exploited for comprehensive and comparable inventory and monitoring of insular arthropod biodiversity. We first reviewed the strengths, limitations and potential synergies among existing approaches of high throughput barcode sequencing. We considered how this could be complemented with deep learning approaches applied to image analysis to study arthropod biodiversity. We then explored how these approaches could be implemented within the framework of an island Genomic Observatories Network (iGON) for the advancement of fundamental and applied understanding of island biodiversity. To this end, we identified seven island biology themes at the interface of ecology, evolution and conservation biology, within which collective and harmonized efforts in HTS arthropod inventory could yield significant advances in island biodiversity research.
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Affiliation(s)
- Brent C Emerson
- Island Ecology and Evolution Research Group, Institute of Natural Products and Agrobiology (IPNA-CSIC), San Cristóbal de la Laguna, Spain
| | - Paulo A V Borges
- Centre for Ecology, Evolution and Environmental Changes (cE3c)/Azorean Biodiversity Group, Faculty of Agricultural Sciences and Environment, CHANGE - Global Change and Sustainability Institute, University of the Azores, Angra do Heroísmo, Portugal
| | - Pedro Cardoso
- Centre for Ecology, Evolution and Environmental Changes (cE3c)/Azorean Biodiversity Group, Faculty of Agricultural Sciences and Environment, CHANGE - Global Change and Sustainability Institute, University of the Azores, Angra do Heroísmo, Portugal
- Laboratory for Integrative Biodiversity Research (LIBRe), Finnish Museum of Natural History Luomus, University of Helsinki, Helsinki, Finland
| | - Peter Convey
- British Antarctic Survey, NERC, Cambridge, UK
- Department of Zoology, University of Johannesburg, Auckland Park, South Africa
| | - Jeremy R deWaard
- Centre for Biodiversity Genomics, University of Guelph, Guelph, Canada
- School of Environmental Sciences, University of Guelph, Guelph, Canada
| | - Evan P Economo
- Biodiversity and Biocomplexity Unit, Okinawa Institute of Science and Technology Graduate University, Okinawa, Japan
- Radcliffe Institute for Advanced Study, Harvard University, Cambridge, Massachusetts, USA
| | - Rosemary G Gillespie
- Department of Environmental Science, Policy and Management, University of California, Berkeley, Berkeley, California, USA
| | - Susan Kennedy
- Biodiversity and Biocomplexity Unit, Okinawa Institute of Science and Technology Graduate University, Okinawa, Japan
| | | | - Rudolf Meier
- Center for Integrative Biodiversity Discovery, Leibniz Institute for Evolution and Biodiversity Science, Museum für Naturkunde, Berlin, Germany
- Department of Biological Sciences, National University of Singapore, Singapore City, Singapore
| | - George K Roderick
- Department of Environmental Science, Policy and Management, University of California, Berkeley, Berkeley, California, USA
| | | | - Christophe Thébaud
- UMR 5174 EDB Laboratoire Évolution & Diversité Biologique, Université Paul Sabatier Toulouse III, CNRS, IRD, Toulouse, France
| | - Anna Traveset
- Global Change Research Group, Mediterranean Institut of Advanced Studies (CSIC-UIB), Mallorca, Spain
| | - Thomas J Creedy
- Department of Life Sciences, Natural History Museum, London, UK
| | | | - Víctor Noguerales
- Island Ecology and Evolution Research Group, Institute of Natural Products and Agrobiology (IPNA-CSIC), San Cristóbal de la Laguna, Spain
| | - Isaac Overcast
- Département de Biologie, École normale supérieure, Institut de Biologie de l'ENS (IBENS), CNRS, INSERM, Université PSL, Paris, France
| | - Hélène Morlon
- Département de Biologie, École normale supérieure, Institut de Biologie de l'ENS (IBENS), CNRS, INSERM, Université PSL, Paris, France
| | - Anna Papadopoulou
- Department of Biological Sciences, University of Cyprus, Nicosia, Cyprus
| | - Alfried P Vogler
- Department of Life Sciences, Natural History Museum, London, UK
- Department of Life Sciences, Imperial College London, London, UK
| | - Paula Arribas
- Island Ecology and Evolution Research Group, Institute of Natural Products and Agrobiology (IPNA-CSIC), San Cristóbal de la Laguna, Spain
| | - Carmelo Andújar
- Island Ecology and Evolution Research Group, Institute of Natural Products and Agrobiology (IPNA-CSIC), San Cristóbal de la Laguna, Spain
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10
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Martínez-Núñez C, Martínez-Prentice R, García-Navas V. Protected area coverage of vulnerable regions to conserve functional diversity of birds. CONSERVATION BIOLOGY : THE JOURNAL OF THE SOCIETY FOR CONSERVATION BIOLOGY 2023; 37:e14131. [PMID: 37259609 DOI: 10.1111/cobi.14131] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/13/2023] [Revised: 05/21/2023] [Accepted: 05/23/2023] [Indexed: 06/02/2023]
Abstract
Global-change drivers are increasing the rates of species extinction worldwide, posing a serious threat to ecosystem functioning. Preserving the functional diversity of species is currently a priority to mitigate abrupt biodiversity loss in the coming decades. Therefore, understanding what factors better predict functional diversity loss in bird assemblages at a global scale and how existing protected areas cover the most vulnerable regions is of key importance for conservation. We examined the environmental factors associated with the risk of functional diversity loss under 3 scenarios of bird species extinction based on species distribution range size, generation length, and International Union for the Conservation of Nature conservation status. Then, we identified regions that deserve special conservation focus. We also assessed how efficiently extant terrestrial protected areas preserve particularly vulnerable bird assemblages based on predicted scenarios of extinction risk. The vulnerability of bird functional diversity increased as net primary productivity, land-use diversity, mean annual temperature, and elevation decreased. Low values for these environmental factors were associated with a higher risk of functional diversity loss worldwide through two mechanisms: one independent of species richness that affects assemblages with low levels of niche packing and high functional dissimilarity among species, and the other that affects assemblages with low species richness and high rates of extinction. Existing protected areas ineffectively safeguarded regions with a high risk of losing functional diversity in the next decades. The global predictors and the underlying mechanisms of functional vulnerability in bird assemblages we identified can inform strategies aimed at preserving bird-driven ecological functions worldwide.
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Affiliation(s)
- Carlos Martínez-Núñez
- Department of Integrative Ecology, Estación Biológica de Doñana EBD (CSIC), Seville, Spain
| | - Ricardo Martínez-Prentice
- Institute of Agriculture and Environmental Sciences, Estonian University of Life Sciences, Tartu, Estonia
| | - Vicente García-Navas
- Department of Integrative Ecology, Estación Biológica de Doñana EBD (CSIC), Seville, Spain
- Department of Evolutionary Biology and Environmental Studies, University of Zurich, Zurich, Switzerland
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11
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Kuczynski L, Ontiveros VJ, Hillebrand H. Biodiversity time series are biased towards increasing species richness in changing environments. Nat Ecol Evol 2023; 7:994-1001. [PMID: 37277495 PMCID: PMC10333117 DOI: 10.1038/s41559-023-02078-w] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2022] [Accepted: 04/18/2023] [Indexed: 06/07/2023]
Abstract
The discrepancy between global loss and local constant species richness has led to debates over data quality, systematic biases in monitoring programmes and the adequacy of species richness to capture changes in biodiversity. We show that, more fundamentally, null expectations of stable richness can be wrong, despite independent yet equal colonization and extinction. We analysed fish and bird time series and found an overall richness increase. This increase reflects a systematic bias towards an earlier detection of colonizations than extinctions. To understand how much this bias influences richness trends, we simulated time series using a neutral model controlling for equilibrium richness and temporal autocorrelation (that is, no trend expected). These simulated time series showed significant changes in richness, highlighting the effect of temporal autocorrelation on the expected baseline for species richness changes. The finite nature of time series, the long persistence of declining populations and the potential strong dispersal limitation probably lead to richness changes when changing conditions promote compositional turnover. Temporal analyses of richness should incorporate this bias by considering appropriate neutral baselines for richness changes. Absence of richness trends over time, as previously reported, can actually reflect a negative deviation from the positive biodiversity trend expected by default.
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Affiliation(s)
- Lucie Kuczynski
- Plankton Ecology Lab, Institute for Chemistry and Biology of the Marine Environment, Carl von Ossietzky University Oldenburg, Wilhelmshaven, Germany.
| | - Vicente J Ontiveros
- Institute of Aquatic Ecology, University of Girona, Girona, Spain
- Department of Life Sciences, Ben-Gurion University of the Negev, Be'er Sheva, Israel
| | - Helmut Hillebrand
- Plankton Ecology Lab, Institute for Chemistry and Biology of the Marine Environment, Carl von Ossietzky University Oldenburg, Wilhelmshaven, Germany
- Helmholtz Institute for Functional Marine Biodiversity at the University of Oldenburg (HIFMB), Oldenburg, Germany
- Alfred-Wegener-Institute, Helmholtz Centre for Polar and Marine Research, Bremerhaven, Germany
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12
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Yuan S, Miao K, Qian R, Zhao Y, Hu D, Hu C, Chang Q. The role of landscape in shaping bird community and implications for landscape management at Nanjing Lukou International Airport. Ecol Evol 2023; 13:e9646. [PMID: 36620403 PMCID: PMC9817198 DOI: 10.1002/ece3.9646] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2022] [Revised: 11/15/2022] [Accepted: 12/01/2022] [Indexed: 01/09/2023] Open
Abstract
Understanding the patterns of bird diversity and its driving force is necessary for bird strike prevention. In this study, we investigated the effects of landscape on phylogenetic and functional diversity of bird communities at Nanjing Lukou International Airport (NLIA). Bird identifications and counting of individuals were carried out from November 2017 to October 2019. Based on the land-cover data, the landscape was divided into four main types, including farmlands, woodlands, wetlands, and urban areas. Bird phylogenetic and functional diversity were strongly affected by landscape matrix types. Species richness and Faith's phylogenetic distance were highest in woodlands, while mean pairwise distance (MPD), mean nearest-taxon distance (MNTD), and functional dispersion (FDis) were highest in wetlands. Based on the feeding behavior, carnivorous birds had the lowest species richness but had the highest FDis, which implied that carnivorous birds occupied most niches at the NLIA. Moreover, bird assemblages exhibited phylogenetic and functional clustering in the four kinds of landscapes. A variety of landscape attributes had significant effects on species diversity, phylogenetic and functional diversity. Landscape-scale factors played an important role in the shaping of bird communities around NLIA. Our results suggest that landscape management surrounding airports can provide new approaches for policymakers to mitigate wildlife strikes.
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Affiliation(s)
- Sijia Yuan
- Jiangsu Key Laboratory for Biodiversity and Biotechnology, School of Life SciencesNanjing Normal UniversityNanjingChina
| | - Keer Miao
- Jiangsu Key Laboratory for Biodiversity and Biotechnology, School of Life SciencesNanjing Normal UniversityNanjingChina
| | - Ruen Qian
- Jiangsu Key Laboratory for Biodiversity and Biotechnology, School of Life SciencesNanjing Normal UniversityNanjingChina
| | - Yang Zhao
- Nanjing Lukou International AirportNanjingChina
| | - Dongfang Hu
- Nanjing Lukou International AirportNanjingChina
| | - Chaochao Hu
- Jiangsu Key Laboratory for Biodiversity and Biotechnology, School of Life SciencesNanjing Normal UniversityNanjingChina,Analytical and Testing CenterNanjing Normal UniversityNanjingChina
| | - Qing Chang
- Jiangsu Key Laboratory for Biodiversity and Biotechnology, School of Life SciencesNanjing Normal UniversityNanjingChina
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13
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Ali JR, Blonder BW, Pigot AL, Tobias JA. Bird extinctions threaten to cause disproportionate reductions of functional diversity and uniqueness. Funct Ecol 2022. [DOI: 10.1111/1365-2435.14201] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
Affiliation(s)
- Jarome R. Ali
- Department of Life Sciences Imperial College London Ascot UK
- Department of Ecology and Evolutionary Biology Princeton University Princeton New Jersey USA
| | - Benjamin W. Blonder
- Department of Environmental Science, Policy, and Management University of California Berkeley California USA
- Environmental Change Institute, School of Geography and the Environment University of Oxford Oxford UK
| | - Alex L. Pigot
- Centre for Biodiversity and Environment Research, Department of Genetics, Evolution and Environment University College London London UK
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14
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Hatfield JH, Davis KE, Thomas CD. Lost, gained, and regained functional and phylogenetic diversity of European mammals since 8000 years ago. GLOBAL CHANGE BIOLOGY 2022; 28:5283-5293. [PMID: 35748709 PMCID: PMC9540530 DOI: 10.1111/gcb.16316] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/23/2022] [Revised: 05/27/2022] [Accepted: 06/17/2022] [Indexed: 06/01/2023]
Abstract
Mammals have experienced high levels of human-mediated extirpations but have also been widely introduced to new locations, and some have recovered from historic persecution. Both of these processes-losses and gains-have resulted in concern about functional losses and changes in ecological communities as new ecological states develop. The question of whether species turnover inevitably leads to declines in functional and phylogenetic diversity depends, however, on the traits and phylogenetic distinctiveness of the species that are lost, gained, or regained. Comparing ~8000 years ago with the last century, we show that extirpations and range retractions have indeed reduced the functional and phylogenetic diversity of mammals in most European regions (countries and island groups), but species recoveries and the introduction of non-native species have increased functional and phylogenetic diversity by equivalent or greater amounts in many regions. Overall, across Europe, species richness increased in 41 regions over the last 8000 years and declined in 1; phylogenetic diversity increased in 33 and declined in 12, while functional diversity results showed 20 increases and 25 decreases. The balance of losses (extirpations) and gains (introductions, range expansions) has, however, led to net increases in functional diversity on many islands, where the original diversity was low, and across most of western Europe. Historically extirpated mega- and mesofaunal species have recolonized or been reintroduced to many European regions, contributing to recent functional and phylogenetic diversity recovery. If conservation rewilding projects continue to reintroduce regionally extirpated species and domestic descendants of "extinct" species to provide replacement grazing, browsing, and predation, there is potential to generate net functional and phylogenetic diversity gains (relative to 8000 years ago) in most European regions.
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Affiliation(s)
- Jack H. Hatfield
- Leverhulme Centre for Anthropocene BiodiversityUniversity of YorkYorkUK
- Department of BiologyUniversity of YorkYorkUK
| | | | - Chris D. Thomas
- Leverhulme Centre for Anthropocene BiodiversityUniversity of YorkYorkUK
- Department of BiologyUniversity of YorkYorkUK
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15
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Hughes EC, Edwards DP, Thomas GH. The homogenization of avian morphological and phylogenetic diversity under the global extinction crisis. Curr Biol 2022; 32:3830-3837.e3. [PMID: 35868322 PMCID: PMC9616725 DOI: 10.1016/j.cub.2022.06.018] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2022] [Revised: 05/11/2022] [Accepted: 06/08/2022] [Indexed: 11/30/2022]
Abstract
Biodiversity is facing a global extinction crisis that will reduce ecological trait diversity, evolutionary history, and ultimately ecosystem functioning and services.1, 2, 3, 4 A key challenge is understanding how species losses will impact morphological and phylogenetic diversity at global scales.5,6 Here, we test whether the loss of species threatened with extinction according to the International Union for Conservation of Nature (IUCN) leads to morphological and phylogenetic homogenization7,8 across both the whole avian class and within each biome and ecoregion globally. We use a comprehensive set of continuous morphological traits extracted from museum collections of 8,455 bird species, including geometric morphometric beak shape data,9 and sequentially remove species from those at most to least threat of extinction. We find evidence of morphological, but not phylogenetic, homogenization across the avian class, with species becoming more alike in terms of their morphology. We find that most biome and ecoregions are expected to lose morphological diversity at a greater rate than predicted by species loss alone, with the most imperiled regions found in East Asia and the Himalayan uplands and foothills. Only a small proportion of assemblages are threatened with phylogenetic homogenization, in particular parts of Indochina. Species extinctions will lead to a major loss of avian ecological strategies, but not a comparable loss of phylogenetic diversity. As the decline of species with unique traits and their replacement with more widespread generalist species continues, the protection of assemblages at most risk of morphological and phylogenetic homogenization should be a key conservation priority. Predicted loss of birds will drive exceptional declines in morphological diversity Species extinctions lead to a major loss of ecological strategies and functions Most biomes and ecoregions will experience morphological homogenization Phylogenetic diversity tends to decline as expected as species go extinct
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Affiliation(s)
- Emma C Hughes
- Ecology and Evolutionary Biology, School of Biosciences, University of Sheffield, Sheffield S10 2TN, UK; Bird Group, Department of Life Sciences, Natural History Museum, Akeman Street, Tring HP23 6AP, UK.
| | - David P Edwards
- Ecology and Evolutionary Biology, School of Biosciences, University of Sheffield, Sheffield S10 2TN, UK
| | - Gavin H Thomas
- Ecology and Evolutionary Biology, School of Biosciences, University of Sheffield, Sheffield S10 2TN, UK; Bird Group, Department of Life Sciences, Natural History Museum, Akeman Street, Tring HP23 6AP, UK.
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16
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Tobias JA. A bird in the hand: Global-scale morphological trait datasets open new frontiers of ecology, evolution and ecosystem science. Ecol Lett 2022; 25:573-580. [PMID: 35199920 DOI: 10.1111/ele.13960] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Joseph A Tobias
- Department of Life Sciences, Imperial College London, Ascot, UK
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17
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Cardador L, Abellán P, Blackburn TM. Incorporating phylogeographic information in alien bird distribution models increases geographic extent but not accuracy of predictions. Biol Invasions 2021. [DOI: 10.1007/s10530-021-02673-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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