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Liang W, Nunes R, Leong JV, Carvalho APS, Müller CJ, Braby MF, Pequin O, Hoshizaki S, Morinaka S, Peggie D, Badon JAT, Mohagan AB, Beaver E, Hsu YF, Inayoshi Y, Monastyrskii A, Vlasanek P, Toussaint EFA, Benítez HA, Kawahara AY, Pierce NE, Lohman DJ. To and fro in the archipelago: Repeated inter-island dispersal and New Guinea's orogeny affect diversification of Delias, the world's largest butterfly genus. Mol Phylogenet Evol 2024; 194:108022. [PMID: 38325534 DOI: 10.1016/j.ympev.2024.108022] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/13/2023] [Revised: 01/20/2024] [Accepted: 01/28/2024] [Indexed: 02/09/2024]
Abstract
The world's largest butterfly genus Delias, commonly known as Jezebels, comprises ca. 251 species found throughout Asia, Australia, and Melanesia. Most species are endemic to islands in the Indo-Australian Archipelago or to New Guinea and nearby islands in Melanesia, and many species are restricted to montane habitats over 1200 m. We inferred an extensively sampled and well-supported molecular phylogeny of the group to better understand the spatial and temporal dimensions of its diversification. The remarkable diversity of Delias evolved in just ca. 15-16 Myr (crown age). The most recent common ancestor of a clade with most of the species dispersed out of New Guinea ca. 14 Mya, but at least six subsequently diverging lineages dispersed back to the island. Diversification was associated with frequent dispersal of lineages among the islands of the Indo-Australian Archipelago, and the divergence of sister taxa on a single landmass was rare and occurred only on the largest islands, most notably on New Guinea. We conclude that frequent inter-island dispersal during the Neogene-likely facilitated by frequent sea level change-sparked much diversification during that period. Many extant New Guinea lineages started diversifying 5 Mya, suggesting that orogeny facilitated their diversification. Our results largely agree with the most recently proposed species group classification system, and we use our large taxon sample to extend this system to all described species. Finally, we summarize recent insights to speculate how wing pattern evolution, mimicry, and sexual selection might also contribute to these butterflies' rapid speciation and diversification.
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Affiliation(s)
- Weijun Liang
- Department of Biology, City College of New York, City University of New York, USA
| | - Renato Nunes
- Department of Biology, City College of New York, City University of New York, USA; PhD Program in Biology, Graduate Center, City University of New York, New York, NY, USA
| | - Jing V Leong
- Department of Biology, City College of New York, City University of New York, USA; Biology Centre of the Czech Academy of Sciences, Branisovska 31, Ceske Budejovice, Czech Republic; Faculty of Science, Department of Zoology, University of South Bohemia, Ceske Budejovice, Czech Republic
| | - Ana Paula S Carvalho
- McGuire Center for Lepidoptera and Biodiversity, Florida Museum of Natural History, University of Florida, Gainesville, FL, USA
| | | | - Michael F Braby
- Division of Ecology and Evolution, Research School of Biology, The Australian National University, Acton, ACT, Australia; Australian National Insect Collection, Canberra, ACT, Australia
| | | | - Sugihiko Hoshizaki
- Department of Agricultural and Environmental Biology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Yayoi, Bunkyo-ku, Tokyo, Japan
| | | | - Djunijanti Peggie
- Museum Zoologicum Bogoriense, Research Center for Biosystematics and Evolution, National Research and Innovation Agency, Cibinong-Bogor, Indonesia
| | - Jade Aster T Badon
- Animal Biology Division, Institute of Biological Sciences, University of the Philippines Los Baños, Laguna, Philippines
| | - Alma B Mohagan
- Department of Biology, College of Arts and Sciences, and Center for Biodiversity Research & Extension in Mindanao, Central Mindanao University, Musuan, Maramag, Bukidnon, Philippines
| | - Ethan Beaver
- Division of Ecology and Evolution, Research School of Biology, The Australian National University, Acton, ACT, Australia; Australian National Insect Collection, Canberra, ACT, Australia
| | - Yu-Feng Hsu
- College of Life Science, National Taiwan Normal University, Taipei, Taiwan
| | - Yutaka Inayoshi
- Sritana Condominium 2, 96/173, Huay Kaeo Rd. T. Suthep, A. Muang, Chiang Mai, Thailand
| | - Alexander Monastyrskii
- Vietnam National Museum of Nature, Vietnam Academy of Science and Technology, Cau Giay, Hanoi, Viet Nam
| | - Petr Vlasanek
- T.G. Masaryk Water Research Institute, Prague, Czech Republic
| | | | - Hugo A Benítez
- Laboratorio de Ecología y Morfometría Evolutiva, Centro de Investigación de Estudios Avanzados del Maule, Universidad Católica del Maule, Talca, Chile
| | - Akito Y Kawahara
- McGuire Center for Lepidoptera and Biodiversity, Florida Museum of Natural History, University of Florida, Gainesville, FL, USA; Entomology & Nematology Department and Department of Biology, University of Florida, Gainesville, FL, USA
| | - Naomi E Pierce
- Department of Organismic and Evolutionary Biology and Museum of Comparative Zoology, Harvard University, Cambridge, MA, USA
| | - David J Lohman
- Department of Biology, City College of New York, City University of New York, USA; PhD Program in Biology, Graduate Center, City University of New York, New York, NY, USA; Entomology Section, National Museum of Natural History, Manila, Philippines.
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Winkler G, Kis JT, Arapovicsné Kiss K, Schandl L. [From GLP1 receptor agonists to triple hormone receptor activation supplemented with glucagon receptor agonism.]. Orv Hetil 2023; 164:1656-1664. [PMID: 37865924 DOI: 10.1556/650.2023.32894] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/19/2023] [Accepted: 08/05/2023] [Indexed: 10/24/2023]
Abstract
Following the introduction of mono- and then dual hormone (incretin) receptor agonists into therapy, attention was turned to multiple receptor stimulation, with the additional activation of the glucagon receptor, as a new option for the pharmaceutical treatment of type 2 diabetes and obesity. In addition to its role in carbohydrate metabolism, the article reviews the other important physiological tasks of glucagon, especially its participation in intrainsular paracrine regulation, energy expenditure and the shaping of appetite and food consumption. It covers the potential benefits of the triple combination and briefly touches data on the efficacy and safety of the first triple receptor agonist drug, retatrutide, in preclinical human studies. Further confirmation of the promising results may represent progress in the treatment of these forms of disease and their accompanying conditions, such as steatosis hepatis. Orv Hetil. 2023; 164(42): 1656-1664.
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Affiliation(s)
- Gábor Winkler
- 1 Észak-budai Szent János Centrumkórház, II. Belgyógyászat-Diabetológia Budapest, Diós árok 1-3., 1125 Magyarország
- 2 Miskolci Egyetem, Egészségtudományi Kar, Elméleti Egészségtudományi Intézet Miskolc Magyarország
| | - János Tibor Kis
- 1 Észak-budai Szent János Centrumkórház, II. Belgyógyászat-Diabetológia Budapest, Diós árok 1-3., 1125 Magyarország
| | - Krisztina Arapovicsné Kiss
- 1 Észak-budai Szent János Centrumkórház, II. Belgyógyászat-Diabetológia Budapest, Diós árok 1-3., 1125 Magyarország
| | - László Schandl
- 1 Észak-budai Szent János Centrumkórház, II. Belgyógyászat-Diabetológia Budapest, Diós árok 1-3., 1125 Magyarország
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Fernandez-Triana JL, Shimbori EM, Whitfield JB, Penteado-Dias AM, Shaw SR, Boudreault C, Sones J, Perez K, Brown A, Manjunath R, Burns JM, Hebert PDN, Smith MA, Hallwachs W, Janzen DH. A revision of the parasitoid wasp genus Alphomelon Mason with the description of 30 new species (Hymenoptera, Braconidae). Zookeys 2023; 1175:5-162. [PMID: 37636532 PMCID: PMC10448698 DOI: 10.3897/zookeys.1175.105068] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/17/2023] [Accepted: 06/02/2023] [Indexed: 08/29/2023] Open
Abstract
The parasitoid wasp genus Alphomelon Mason, 1981 is revised, based on a combination of basic morphology (dichotomous key and brief diagnostic descriptions), DNA barcoding, biology (host data and wasp cocoons), and distribution data. A total of 49 species is considered; the genus is almost entirely Neotropical (48 species recorded from that region), but three species reach the Nearctic, with one of them extending as far north as 45° N in Canada. Alphomelon parasitizes exclusively Hesperiinae caterpillars (Lepidoptera: Hesperiidae), mostly feeding on monocots in the families Arecaceae, Bromeliaceae, Cannaceae, Commelinaceae, Heliconiaceae, and Poaceae. Most wasp species parasitize either on one or very few (2-4) host species, usually within one or two hesperiine genera; but some species can parasitize several hosts from up to nine different hesperiine genera. Among species with available data for their cocoons, roughly half weave solitary cocoons (16) and half are gregarious (17); cocoons tend to be surrounded by a rather distinctive, coarse silk (especially in solitary species, but also distinguishable in some gregarious species). Neither morphology nor DNA barcoding alone was sufficient on its own to delimit all species properly; by integrating all available evidence (even if incomplete, as available data for every species is different) a foundation is provided for future studies incorporating more specimens, especially from South America. The following 30 new species are described: cruzi, itatiaiensis, and palomae, authored by Shimbori & Fernandez-Triana; and adrianguadamuzi, amazonas, andydeansi, calixtomoragai, carolinacanoae, christerhanssoni, diniamartinezae, duvalierbricenoi, eldaarayae, eliethcantillanoae, gloriasihezarae, guillermopereirai, hazelcambroneroae, josecortesi, keineraragoni, luciarosae, manuelriosi, mikesharkeyi, osvaldoespinozai, paramelanoscelis, paranigriceps, petronariosae, ricardocaleroi, rigoi, rostermoragai, sergioriosi, and yanayacu, authored by Fernandez-Triana & Shimbori.
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Affiliation(s)
- Jose L. Fernandez-Triana
- Canadian National Collection of Insects, Arachnids and Nematodes, 960 Carling Ave., Ottawa, K1A0C6, Canada
| | - Eduardo M. Shimbori
- Colección Nacional de Insectos, Instituto de Biología, Universidad Nacional Autónoma de México, Tercer Circuito, S/N, Ciudad Universitaria, Coyoacán, C.P. 04510, Ciudad de México, Mexico
| | | | | | - Scott R. Shaw
- College of Agriculture and Natural Resources, University of Wyoming, Laramie, USA
| | - Caroline Boudreault
- Canadian National Collection of Insects, Arachnids and Nematodes, 960 Carling Ave., Ottawa, K1A0C6, Canada
| | - Jayme Sones
- Canadian Centre for DNA Barcoding, University of Guelph, Guelph, Canada
| | - Kate Perez
- Canadian Centre for DNA Barcoding, University of Guelph, Guelph, Canada
| | - Allison Brown
- Canadian Centre for DNA Barcoding, University of Guelph, Guelph, Canada
| | - Ramya Manjunath
- Canadian Centre for DNA Barcoding, University of Guelph, Guelph, Canada
| | - John M. Burns
- Department of Entomology, National Museum of Natural History, Smithsonian Institution, Washington D.C., USA
| | - P. D. N. Hebert
- Canadian Centre for DNA Barcoding, University of Guelph, Guelph, Canada
| | - M. Alex Smith
- Canadian Centre for DNA Barcoding, University of Guelph, Guelph, Canada
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Fleming AJ, Woodley N, Smith MA, Hallwachs W, Janzen DH. Revision of Belvosia Robineau-Desvoidy (Diptera, Tachinidae) and 33 new species from Area de Conservación Guanacaste in northwestern Costa Rica with a key to known North and Mesoamerican species. Biodivers Data J 2023; 11:e103667. [PMID: 38327385 PMCID: PMC10848636 DOI: 10.3897/bdj.11.e103667] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/17/2023] [Accepted: 06/23/2023] [Indexed: 02/09/2024] Open
Abstract
Background This revision is part of a continuing series of taxonomic work aimed at the description of new taxa and the redescription of known taxa of the Tachinidae of Area de Conservación Guanacaste in northwestern Costa Rica. Here we describe 33 new species in the genus Belvosia Robineau-Desvoidy, 1830 (Diptera: Tachinidae). All species described here were reared from this ongoing inventory of wild-caught caterpillars spanning a variety of families (Lepidoptera: Erebidae, Eupterotidae, Noctuidae, Notodontidae, Saturniidae, and Sphingidae). We provide a morphological description of each species with limited information on life history, molecular data, and photographic documentation. In addition to the new species, the authors provide a redescription of the genus Belvosia, as well as provide a key to the identification of the species present in the Meso- and North-American fauna. New information The following 33 new species of Belvosia Robineau-Desvoidy, 1830, all authored by Fleming & Woodley, are described: Belvosiaadrianguadamuzi Fleming & Woodley sp. n., Belvosiaanacarballoae Fleming & Woodley sp. n., Belvosiaangelhernandezi Fleming & Woodley sp. n., Belvosiabrigittevilchezae Fleming & Woodley sp. n., Belvosiaalixtomoragai Fleming & Woodley sp. n., Belvosiacarolinacanoae Fleming & Woodley sp. n., Belvosiaciriloumanai Fleming & Woodley sp. n., Belvosiadiniamartinezae Fleming & Woodley sp. n., Belvosiaduniagarciae Fleming & Woodley sp. n., Belvosiaduvalierbricenoi Fleming & Woodley sp. n., Belvosiaeldaarayae Fleming & Woodley sp. n., Belvosiaeliethcantillanoae Fleming & Woodley sp. n., Belvosiafreddyquesadai Fleming & Woodley sp. n., Belvosiagloriasihezarae Fleming & Woodley sp. n., Belvosiaguillermopereirai Fleming & Woodley sp. n., Belvosiaharryramirezi Fleming & Woodley sp. n., Belvosiahazelcambroneroae Fleming & Woodley sp. n., Belvosiajorgehernandezi Fleming & Woodley sp. n., Belvosiajosecortezi Fleming & Woodley sp. n., Belvosiajoseperezi Fleming & Woodley sp. n., Belvosiakeinoraragoni Fleming & Woodley sp. n., Belvosialuciariosae Fleming & Woodley sp. n., Belvosiamanuelpereirai Fleming & Woodley sp. n., Belvosiamanuelriosi Fleming & Woodley sp. n., Belvosiaminorcarmonai Fleming & Woodley sp. n., Belvosiaosvaldoespinozai Fleming & Woodley sp. n., Belvosiapabloumanai Fleming & Woodley sp. n., Belvosiapetronariosae Fleming & Woodley sp. n., Belvosiaricardocaleroi Fleming & Woodley sp. n., Belvosiarobertoespinozai Fleming & Woodley sp. n., Belvosiarostermoragai Fleming & Woodley sp. n., Belvosiaruthfrancoae Fleming & Woodley sp. n., Belvosiasergioriosi Fleming & Woodley sp. n.Belvosiacanalis Aldrich, 1928 is reared and recorded from the inventory; new information relative to host is provided and the species is rediscribed.The following are proposed by Fleming & Woodley as new synonyms of Belvosia Robineau-Desvoidy, 1830: Brachybelvosia Townsend, 1927 syn. n., Belvosiomimops Townsend, 1935 syn. n.The following three new combinations are proposed as a result of the new synonymies: Belvosiabrasilensis (Townsend, 1927), comb. n.; and Belvosiabarbiellinii (Townsend, 1935), comb. n.The authors also propose the following new synonymies: Belvosiabrasilensis (Townsend, 1927) = Belvosiaaurulenta (Bigot, 1888), syn. n.; Belvosiapollinosa Rowe, 1933 = Belvosiaborealis Aldrich, 1928 syn. n.; Belvosiaweyenberghiana (Wulp, 1883) = Belvosiafuliginosa (Walker, 1853) syn. n.; Belvosiabrasiliensis Townsend, 1927 = Belvosiafuliginosa (Walker, 1853) syn. n.; Belvosialuteola Coquillett, 1900 = Belvosiaochriventris (Wulp, 1890) syn. n.; Belvosiasocia (Walker, 1853) = Belvosiaproxima (Walker, 1853) syn. n.; Belvosiachrysopyga (Bigot, 1887) = Belvosiaunifasciata (Robineau-Desvoidy, 1830) syn. n.; Belvosiachrysopygata (Bigot, 1888) = Belvosiaunifasciata (Robineau-Desvoidy, 1830) syn. n.
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Affiliation(s)
- AJ Fleming
- Agriculture Agri-Food Canada, Ottawa, CanadaAgriculture Agri-Food CanadaOttawaCanada
| | - Norman Woodley
- ARS USDA, Arizona, United States of AmericaARS USDAArizonaUnited States of America
| | - M. Alex Smith
- University of Guelph, Guelph, CanadaUniversity of GuelphGuelphCanada
| | - Winnie Hallwachs
- Department of Biology, University of Pennsylvania, Philadelphia, Philadelphia, Pennsylvania, United States of AmericaDepartment of Biology, University of Pennsylvania, PhiladelphiaPhiladelphia, PennsylvaniaUnited States of America
| | - Daniel H Janzen
- Department of Biology, University of Pennsylvania, Philadelphia, Philadelphia, Pennsylvania, United States of AmericaDepartment of Biology, University of Pennsylvania, PhiladelphiaPhiladelphia, PennsylvaniaUnited States of America
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González C, Ballesteros-Mejia L, Díaz-Díaz J, Toro-Vargas DM, Amarillo-Suarez AR, Gey D, León C, Tovar E, Arias M, Rivera N, Buitrago LS, Pinto-Moraes RH, Sano Martins IS, Decaëns T, González MA, Kitching IJ, Rougerie R. Deadly and venomous Lonomia caterpillars are more than the two usual suspects. PLoS Negl Trop Dis 2023; 17:e0011063. [PMID: 36821543 PMCID: PMC9949635 DOI: 10.1371/journal.pntd.0011063] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2022] [Accepted: 12/28/2022] [Indexed: 02/24/2023] Open
Abstract
Caterpillars of the Neotropical genus Lonomia (Lepidoptera: Saturniidae) are responsible for some fatal envenomation of humans in South America inducing hemostatic disturbances in patients upon skin contact with the caterpillars' spines. Currently, only two species have been reported to cause hemorrhagic syndromes in humans: Lonomia achelous and Lonomia obliqua. However, species identifications have remained largely unchallenged despite improved knowledge of venom diversity and growing evidence that the taxonomy used over past decades misrepresents and underestimates species diversity. Here, we revisit the taxonomic diversity and distribution of Lonomia species using the most extensive dataset assembled to date, combining DNA barcodes, morphological comparisons, and geographical information. Considering new evidence for seven undescribed species as well as three newly proposed nomenclatural changes, our integrative approach leads to the recognition of 60 species, of which seven are known or strongly suspected to cause severe envenomation in humans. From a newly compiled synthesis of epidemiological data, we also examine the consequences of our results for understanding Lonomia envenomation risks and call for further investigations of other species' venom activities. This is required and necessary to improve alertness in areas at risk, and to define adequate treatment strategies for envenomed patients, including performing species identification and assessing the efficacy of anti-Lonomia serums against a broader diversity of species.
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Affiliation(s)
- Camila González
- Centro de Investigaciones en Microbiología y Parasitología Tropical (CIMPAT), Facultad de Ciencias, Universidad de los Andes, Bogotá, Colombia, Bogotá, Colombia
- * E-mail: ;
| | - Liliana Ballesteros-Mejia
- Institut de Systématique, Évolution, Biodiversité (ISYEB), Muséum national d’Histoire naturelle, CNRS, EPHE, Sorbonne Université, Université des Antilles, Paris, France
- CESAB, Centre de synthèse et d’Analyse sur la Biodiversité, Montpellier, France
| | - Juana Díaz-Díaz
- Centro de Investigaciones en Microbiología y Parasitología Tropical (CIMPAT), Facultad de Ciencias, Universidad de los Andes, Bogotá, Colombia, Bogotá, Colombia
| | - Diana M. Toro-Vargas
- Centro de Investigaciones en Microbiología y Parasitología Tropical (CIMPAT), Facultad de Ciencias, Universidad de los Andes, Bogotá, Colombia, Bogotá, Colombia
| | | | - Delphine Gey
- Institut de Systématique, Évolution, Biodiversité (ISYEB), Muséum national d’Histoire naturelle, CNRS, EPHE, Sorbonne Université, Université des Antilles, Paris, France
| | - Cielo León
- Centro de Investigaciones en Microbiología y Parasitología Tropical (CIMPAT), Facultad de Ciencias, Universidad de los Andes, Bogotá, Colombia, Bogotá, Colombia
| | - Eduardo Tovar
- Instituto de Investigación de Recursos Biológicos Alexander von Humboldt, Bogotá, Colombia
| | - Mónica Arias
- CIRAD, UMR PHIM, Montpellier, France
- PHIM, Univ Montpellier, CIRAD, INRAE, Institut Agro, IRD, Montpellier, France
| | - Nazario Rivera
- Secretaría de Salud de Casanare. Area de Salud Pública, Yopal, Colombia
| | | | | | | | - Thibaud Decaëns
- CEFE, Univ Montpellier, CNRS, EPHE, IRD, Montpellier, France
| | - Mailyn A. González
- Instituto de Investigación de Recursos Biológicos Alexander von Humboldt, Bogotá, Colombia
| | | | - Rodolphe Rougerie
- Institut de Systématique, Évolution, Biodiversité (ISYEB), Muséum national d’Histoire naturelle, CNRS, EPHE, Sorbonne Université, Université des Antilles, Paris, France
- * E-mail: ;
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DNA Barcode Library of Megadiverse Lepidoptera in an Alpine Nature Park (Italy) Reveals Unexpected Species Diversity. DIVERSITY 2023. [DOI: 10.3390/d15020214] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
Abstract
Species inventories are a prerequisite for biodiversity monitoring and conservation, particularly in protected areas. However, the possibilities of a standardized survey of species diversity using DNA barcoding have so far hardly been implemented, especially in species-rich groups. A first-time molecular-based and nearly complete inventory of the megadiverse insect order Lepidoptera in a protected area in the Alps (Cottian Alps, Italy) was intended to test the possibilities and reliability of DNA-based identifications. From voucher material collected between 2019 and 2022, we successfully sequenced 1213 morphospecies that grouped into 1204 BINs (barcode index numbers), whereas DNA barcoding failed for another 18 species. A total of 35 species shared a BIN with one or more taxa, but a majority of 19 species could still be discriminated by divergent sequences. A total of 12 morphospecies split into two BINs. These species and a further 22 taxa with unique BINs and barcode divergences >2% to the nearest neighbor require taxonomic re-assessment. Two additional cryptic species from the study area were described recently. Finally, 16 species are newly recorded for Italy. Our study, therefore, demonstrates the importance of DNA barcoding for both faunistics and the discovery of cryptic diversity, even in apparently well-studied protected areas.
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Baena-Bejarano N, Reina C, Martínez-Revelo DE, Medina CA, Tovar E, Uribe-Soto S, Neita-Moreno JC, Gonzalez MA. Taxonomic identification accuracy from BOLD and GenBank databases using over a thousand insect DNA barcodes from Colombia. PLoS One 2023; 18:e0277379. [PMID: 37093820 PMCID: PMC10124890 DOI: 10.1371/journal.pone.0277379] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/24/2022] [Accepted: 02/10/2023] [Indexed: 04/25/2023] Open
Abstract
Recent declines of insect populations at high rates have resulted in the need to develop a quick method to determine their diversity and to process massive data for the identification of species of highly diverse groups. A short sequence of DNA from COI is widely used for insect identification by comparing it against sequences of known species. Repositories of sequences are available online with tools that facilitate matching of the sequences of interest to a known individual. However, the performance of these tools can differ. Here we aim to assess the accuracy in identification of insect taxonomic categories from two repositories, BOLD Systems and GenBank. This was done by comparing the sequence matches between the taxonomist identification and the suggested identification from the platforms. We used 1,160 COI sequences representing eight orders of insects from Colombia. After the comparison, we reanalyzed the results from a representative subset of the data from the subfamily Scarabaeinae (Coleoptera). Overall, BOLD systems outperformed GenBank, and the performance of both engines differed by orders and other taxonomic categories (species, genus and family). Higher rates of accurate identification were obtained at family and genus levels. The accuracy was higher in BOLD for the order Coleoptera at family level, for Coleoptera and Lepidoptera at genus and species level. Other orders performed similarly in both repositories. Moreover, the Scarabaeinae subset showed that species were correctly identified only when BOLD match percentage was above 93.4% and a total of 85% of the samples were correctly assigned to a taxonomic category. These results accentuate the great potential of the identification engines to place insects accurately into their respective taxonomic categories based on DNA barcodes and highlight the reliability of BOLD Systems for insect identification in the absence of a large reference database for a highly diverse country.
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Affiliation(s)
| | - Catalina Reina
- ICA-Instituto Colombiano Agropecuario, Soledad, Atlántico, Colombia
| | - Diego Esteban Martínez-Revelo
- Asociación GAICA, Pasto, Nariño, Colombia
- Grupo de Investigación en Sistemática Molecular, Universidad Nacional de Colombia, Sede Medellín, Medellín, Antioquia, Colombia
| | - Claudia A Medina
- Instituto de Investigación de Recursos Biológicos Alexander von Humboldt, Bogotá, Colombia
| | - Eduardo Tovar
- Instituto de Investigación de Recursos Biológicos Alexander von Humboldt, Bogotá, Colombia
| | - Sandra Uribe-Soto
- Grupo de Investigación en Sistemática Molecular, Universidad Nacional de Colombia, Sede Medellín, Medellín, Antioquia, Colombia
| | | | - Mailyn A Gonzalez
- Instituto de Investigación de Recursos Biológicos Alexander von Humboldt, Bogotá, Colombia
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Sääksjärvi IE, Kaunisto KM, Sharkey M, Stedenfeld S, Smith MA, Hallwachs W, Janzen D. Cryptic biodiversity of tropical hesperiid caterpillar-attacking parasitoid wasps: three new species of Creagrura Townes (Hymenoptera, Ichneumonidae, Cremastinae) from Costa Rica and Perú. Biodivers Data J 2022; 10:e91486. [PMID: 36761541 PMCID: PMC9836575 DOI: 10.3897/bdj.10.e91486] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/10/2022] [Accepted: 10/07/2022] [Indexed: 11/12/2022] Open
Abstract
Background We describe three new species of the previously monotypic genus Creagrura Townes from Central and South America: C.alejandromasisi sp. n. and C.rogerblancoi sp. n. from Costa Rica and C.allpahuaya sp. n. from Peru, all of which emphasise the unknown parasitoid insect diversity yet to be revealed in the tropics. New information Host relationships of the two Costa Rican species are described in detail. In addition, it is inferred that the Creagrura wasps find and oviposit in the caterpillar when it is exposed at night, rather than when it is concealed during daylight hours.
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Affiliation(s)
- Ilari E. Sääksjärvi
- Biodiversity Unit, University of Turku, Turku, FinlandBiodiversity Unit, University of TurkuTurkuFinland
| | - Kari M. Kaunisto
- Biodiversity Unit, University of Turku, Turku, FinlandBiodiversity Unit, University of TurkuTurkuFinland
| | - Michael Sharkey
- Department of Entomology, University of Kentucky, Lexington, Kentucky, United States of AmericaDepartment of Entomology, University of Kentucky, LexingtonKentuckyUnited States of America
| | - Shelby Stedenfeld
- University of Kentucky, Department of Entomology, Kentucky, United States of AmericaUniversity of Kentucky, Department of EntomologyKentuckyUnited States of America
| | - M. Alex Smith
- University of Guelph, Guelph, CanadaUniversity of GuelphGuelphCanada
| | - Winnie Hallwachs
- Department of Biology, University of Pennsylvania, Philadelphia, Philadelphia, United States of AmericaDepartment of Biology, University of Pennsylvania, PhiladelphiaPhiladelphiaUnited States of America
| | - Daniel Janzen
- University of Pennsylvania, Philadelphia, United States of AmericaUniversity of PennsylvaniaPhiladelphiaUnited States of America
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9
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Nakahara S, Janzen DH, Hallwachs W, Huertas B, Das GN, Willmott KR. Revision of the "celia clade" of Pseudodebis Forster, 1964, with Two New Species and Notes on Papilio phorcys Fabricius, 1793 (Lepidoptera: Nymphalidae: Satyrinae). NEOTROPICAL ENTOMOLOGY 2022; 51:536-556. [PMID: 35674865 DOI: 10.1007/s13744-022-00954-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/08/2021] [Accepted: 03/04/2022] [Indexed: 06/15/2023]
Abstract
The species-level classification of the "celia clade" of the nymphalid butterfly genus Pseudodebis Forster, 1964, is revised as part of ongoing revisionary work on this genus. The "celia clade" contains three species, of which two, Pseudodebis darrenthroopi Nakahara & Willmott, n. sp. and P. tigrillo Nakahara & Willmott, n. sp., are described and named herein based on morphology and molecular data. Consequently, we increase the described species diversity of Pseudodebis to 13, with a remarkable six species occurring in the trans-Andean region. We discuss five specific epithets associated with the clade and designate a neotype for Papilio celia Cramer, 1780, and lectotype for Taygetis keneza Butler, 1869, based on the same specimen, thus retaining the status of the former name as a senior objective synonym. We also provide a brief historical review for Papilio phorcys Fabricius, 1793, an enigmatic name currently synonymized under Papilio celia. Nevertheless, we were unable to locate the syntype(s) for this name and the identity of Papilio phorcys remains uncertain, so we retain the current synonymy as a parsimonious approach.
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Affiliation(s)
- Shinichi Nakahara
- Entomology and Nematology Dept, Univ of Florida, Gainesville, FL, 32611, USA.
- Depto de Entomología, Museo de Historia Natural, Univ Nacional Mayor de San Marcos, Lima, Peru.
| | - Daniel H Janzen
- Dept of Biology, Univ of Pennsylvania, Philadelphia, PA, USA
| | | | | | - Gaurab Nandi Das
- Institute of Entomology, Biology Centre CAS, České Budějovice, Czech Republic
| | - Keith R Willmott
- McGuire Center for Lepidoptera and Biodiversity, Florida Museum of Natural History, Univ of Florida, Gainesville, FL, USA
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10
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Sharkey MJ, Tucker EM, Baker A, Smith MA, Ratnasingham S, Manjunath R, Hebert P, Hallwachs W, Janzen D. More discussion of minimalist species descriptions and clarifying some misconceptions contained in Meier et al. 2021. Zookeys 2022; 1110:135-149. [PMID: 36761452 PMCID: PMC9848685 DOI: 10.3897/zookeys.1110.85491] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/18/2022] [Accepted: 06/01/2022] [Indexed: 11/12/2022] Open
Abstract
This is a response to a preprint version of "A re-analysis of the data in Sharkey et al.'s (2021) minimalist revision reveals that BINs do not deserve names, but BOLD Systems needs a stronger commitment to open science", https://www.biorxiv.org/content/10.1101/2021.04.28.441626v2. Meier et al. strongly criticized Sharkey et al.'s publication in which 403 new species were deliberately minimally described, based primarily on COI barcode sequence data. Here we respond to these criticisms. The following points are made: 1) Sharkey et al. did not equate BINs with species, as demonstrated in several examples in which multiple species were found to be in single BINs. 2) We reiterate that BINs were used as a preliminary sorting tool, just as preliminary morphological identification commonly sorts specimens based on color and size into unit trays; despite BINs and species concepts matching well over 90% of species, this matching does not equate to equality. 3) Consensus barcodes were used only to provide a diagnosis to conform to the rules of the International Code of Zoological Nomenclature just as consensus morphological diagnoses are. The barcode of a holotype is definitive and simply part of its cellular morphology. 4) Minimalist revisions will facilitate and accelerate future taxonomic research, not hinder it. 5) We refute the claim that the BOLD sequences of Plesiocoelusvanachterbergi are pseudogenes and demonstrate that they simply represent a frameshift mutation. 6) We reassert our observation that morphological evidence alone is insufficient to recognize species within species-rich higher taxa and that its usefulness lies in character states that are congruent with molecular data. 7) We show that in the cases in which COI barcodes code for the same amino acids in different putative species, data from morphology, host specificity, and other ecological traits reaffirm their utility as indicators of genetically distinct lineages.
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Affiliation(s)
| | | | - Austin Baker
- Department of Biological Sciences and Center for Biodiversity Research, University of Memphis, Memphis, Tennessee, USA
| | - M. Alex Smith
- Department of Integrative Biology, University of Guelph, Guelph, Ontario, Canada
| | | | - Ramya Manjunath
- Department of Integrative Biology, University of Guelph, Guelph, Ontario, Canada
| | - Paul Hebert
- Department of Integrative Biology, University of Guelph, Guelph, Ontario, Canada
| | - Winnie Hallwachs
- Centre for Biodiversity Genomics, University of Guelph, Guelph, Ontario, Canada
| | - Daniel Janzen
- Centre for Biodiversity Genomics, University of Guelph, Guelph, Ontario, Canada
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11
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Santos BF, Klopfstein S, Whitfield JB, Sharanowski BJ. Many evolutionary roads led to virus domestication in ichneumonoid parasitoid wasps. CURRENT OPINION IN INSECT SCIENCE 2022; 50:100861. [PMID: 34896617 DOI: 10.1016/j.cois.2021.12.001] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/01/2021] [Revised: 11/13/2021] [Accepted: 12/03/2021] [Indexed: 06/14/2023]
Abstract
The investigation of endogenous viral elements (EVEs) has historically focused on only a few lineages of parasitoid wasps, with negative results consistently underreported. Recent studies show that multiple viral lineages were integrated in at least seven instances in Ichneumonoidea and may be much more widespread than previously thought. Increasingly affordable genomic and bioinformatic approaches have made it feasible to search for viral sequences within wasp genomes, opening an extremely promising research avenue. Advances in wasp phylogenetics have shed light on the evolutionary history of EVE integration, although many questions remain. Phylogenetic proximity can be used as a guide to facilitate targeted screening, to estimate the number and age of integration events and to identify taxa involved in major host switches.
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Affiliation(s)
- Bernardo F Santos
- Institut de Systématique, Evolution, Biodiversité (ISYEB), Muséum national d'Histoire naturelle, CNRS, SU, EPHE, UA, 57 rue Cuvier CP50, Paris Cedex 05, 75231, France
| | - Seraina Klopfstein
- Naturhistorisches Museum Basel, Augustinergasse 2, Basel, 4501, Switzerland
| | - James B Whitfield
- Department of Entomology, 505 S. Goodwin Ave., University of Illinois, Urbana, IL 61801, USA
| | - Barbara J Sharanowski
- University of Central Florida, Department of Biology, 4110 Libra Drive, Biological Sciences Bldg Rm 301, Orlando, FL 32816, USA.
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12
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Fernandez-Triana JL. Turbo taxonomy approaches: lessons from the past and recommendations for the future based on the experience with Braconidae (Hymenoptera) parasitoid wasps. Zookeys 2022; 1087:199-220. [PMID: 35585942 PMCID: PMC8897373 DOI: 10.3897/zookeys.1087.76720] [Citation(s) in RCA: 12] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/18/2021] [Accepted: 02/02/2022] [Indexed: 12/22/2022] Open
Abstract
Not aplicable to a Forum paper, but if needed I can write one.
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13
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Sharkey MJ, Baker A, McCluskey K, Smith A, Naik S, Ratnasingham S, Manjunath R, Perez K, Sones J, D'Souza M, Jacques BS, Hebert P, Hallwachs W, Janzen D. ?Addendum to a minimalist revision of Costa Rican Braconidae: 28 new species and 23 host records. Zookeys 2022; 1075:77-136. [PMID: 35046752 PMCID: PMC8671719 DOI: 10.3897/zookeys.1075.72197] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/26/2021] [Accepted: 09/26/2021] [Indexed: 11/12/2022] Open
Abstract
Twenty-nine species are treated, most of which have host caterpillar and food plant records, and all but one are new to science. The first host record for the agathidine genus Amputoearinus is given. Gnathopleurajosequesadai Sharkey, sp. nov. is reported as a hyperparasitoid of fly larvae, the first such record for the genus. The following new species are diagnosed primarily using COI barcode data; Sharkey is the authority for all: Agathidinae: Aerophilusdavidwagneri, Aerophilusfundacionbandorum, Aerophilusnicklaphami, Lytopylusdavidstopaki, Lytopylusdavidschindeli; Alysiinae: Gnathopleurajosequesadai; Braconinae: Braconandreamezae, Braconfranklinpaniaguai, Braconrafagutierrezi, Braconguillermoblancoi, Braconoscarmasisi, Braconpauldimaurai, Braconshebadimaurae, Saciremakarendimaurae; Cheloninae: Chelonusminorzunigai; Homolobinae: Homolobusstevestroudi; Macrocentrinae: Macrocentrusmichaelstroudi; Orgilinae: Stantoniagilbertfuentesi; Rhysipolinae: Rhysipolisstevearonsoni; Rogadinae: Aleiodeskaydodgeae, Aleiodeskerrydresslerae, Aleiodesjosesolanoi, Aleiodesjuniorporrasi, Aleiodesrocioecheverri, Aleiodesronaldzunigai, Choreborogasjesseausubeli, Triraphisdoncombi, and Yeliconesmayrabonillae.
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Affiliation(s)
- Michael J Sharkey
- The Hymenoptera Institute, 116 Franklin Ave., Redlands, CA, 92373, USA The Hymenoptera Institute Redlands United States of America
| | - Austin Baker
- The Hymenoptera Institute, 116 Franklin Ave., Redlands, CA, 92373, USA The Hymenoptera Institute Redlands United States of America.,Department of Entomology, University of California, Riverside, CA 92521, USA University of California Riverside United States of America
| | - Kathryn McCluskey
- Department of Biology, University of Pennsylvania, Philadelphia, PA 19104-6018, USA University of Pennsylvania Philadelphia United States of America
| | - Alex Smith
- Department of Integrative Biology, University of Guelph and Biodiversity Institute of Ontario, Guelph, Canada University of Guelph and Biodiversity Institute of Ontario Guelph Canada
| | - Suresh Naik
- Centre for Biodiversity Genomics, University of Guelph, Guelph, Canada University of Guelph Guelph Canada
| | - Sujeevan Ratnasingham
- Centre for Biodiversity Genomics, University of Guelph, Guelph, Canada University of Guelph Guelph Canada
| | - Ramya Manjunath
- Centre for Biodiversity Genomics, University of Guelph, Guelph, Canada University of Guelph Guelph Canada
| | - Kate Perez
- Centre for Biodiversity Genomics, University of Guelph, Guelph, Canada University of Guelph Guelph Canada
| | - Jayme Sones
- Centre for Biodiversity Genomics, University of Guelph, Guelph, Canada University of Guelph Guelph Canada
| | - Michelle D'Souza
- Centre for Biodiversity Genomics, University of Guelph, Guelph, Canada University of Guelph Guelph Canada
| | - Brianne St Jacques
- Centre for Biodiversity Genomics, University of Guelph, Guelph, Canada University of Guelph Guelph Canada
| | - Paul Hebert
- Centre for Biodiversity Genomics, University of Guelph, Guelph, Canada University of Guelph Guelph Canada
| | - Winnie Hallwachs
- Department of Biology, University of Pennsylvania, Philadelphia, PA 19104-6018, USA University of Pennsylvania Philadelphia United States of America
| | - Daniel Janzen
- Department of Biology, University of Pennsylvania, Philadelphia, PA 19104-6018, USA University of Pennsylvania Philadelphia United States of America
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14
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Fleming AJ, Wood DM, Smith MA, Hallwachs W, Janzen D. Revison of Metaplagia Coquillett (Diptera: Tachinidae) with description of five new species from Area de Conservación Guanacaste in northwestern Costa Rica. Biodivers Data J 2021; 9:e68598. [PMID: 34393585 PMCID: PMC8342401 DOI: 10.3897/bdj.9.e68598] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/12/2021] [Accepted: 07/16/2021] [Indexed: 12/02/2022] Open
Abstract
Background We revise the genus Metaplagia Coquillett, 1895 and describe five new species from Area de Conservación Guanacaste (ACG) in northwestern Costa Rica. All new species were reared from an ongoing inventory of wild-caught caterpillars spanning a variety of species within the family Sphingidae (Lepidoptera: Sphingidae). Our study provides a concise description of each new species using morphology, life history, molecular data and photographic documentation. In addition to the new species, the authors provide a re-description of the genus and a revised key to the species of Metaplagia. New information The following five new species of Metaplagia are described: Metaplagialeahdennisae Fleming & Wood sp. n., Metaplagialindarobinsonae Fleming & Wood sp. n., Metaplagiapaulinesaribasae Fleming & Wood sp. n., Metaplagiarobinsherwoodae Fleming & Wood sp. n. and Metaplagiasvetlanakozikae Fleming & Wood sp. n. The following is proposed by Fleming & Wood as new combination of Plagiomima Brauer & Bergenstamm, 1891: Plagiomimalatifrons (Reinhard, 1956) comb. n.
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Affiliation(s)
- A J Fleming
- Agriculture Agri-Food Canada, Ottawa, Canada Agriculture Agri-Food Canada Ottawa Canada
| | - D Monty Wood
- Agriculture Agri-Food Canada, Ottawa, Canada Agriculture Agri-Food Canada Ottawa Canada
| | - M Alex Smith
- University of Guelph, Guelph, Canada University of Guelph Guelph Canada
| | - Winnie Hallwachs
- Department of Biology, University of Pennsylvania, Philadelphia, United States of America Department of Biology, University of Pennsylvania Philadelphia United States of America
| | - Daniel Janzen
- Department of Biology, University of Pennsylvania, Philadelphia, United States of America Department of Biology, University of Pennsylvania Philadelphia United States of America
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15
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Honeycutt RL. Editorial: DNA Barcodes: Controversies, Mechanisms, and Future Applications. Front Ecol Evol 2021. [DOI: 10.3389/fevo.2021.718865] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
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16
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To us insectometers, it is clear that insect decline in our Costa Rican tropics is real, so let's be kind to the survivors. Proc Natl Acad Sci U S A 2021; 118:2002546117. [PMID: 33431562 DOI: 10.1073/pnas.2002546117] [Citation(s) in RCA: 33] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/31/2023] Open
Abstract
We have been field observers of tropical insects on four continents and, since 1978, intense observers of caterpillars, their parasites, and their associates in the 1,260 km2 of dry, cloud, and rain forests of Área de Conservación Guanacaste (ACG) in northwestern Costa Rica. ACG's natural ecosystem restoration began with its national park designation in 1971. As human biomonitors, or "insectometers," we see that ACG's insect species richness and density have gradually declined since the late 1970s, and more intensely since about 2005. The overarching perturbation is climate change. It has caused increasing ambient temperatures for all ecosystems; more erratic seasonal cues; reduced, erratic, and asynchronous rainfall; heated air masses sliding up the volcanoes and burning off the cloud forest; and dwindling biodiversity in all ACG terrestrial ecosystems. What then is the next step as climate change descends on ACG's many small-scale successes in sustainable biodevelopment? Be kind to the survivors by stimulating and facilitating their owner societies to value them as legitimate members of a green sustainable nation. Encourage national bioliteracy, BioAlfa.
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17
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Sharkey M, Brown B, Baker A, Mutanen M. Response to Zamani et al. (2020): The omission of critical data in the pursuit of "revolutionary" methods to accelerate the description of species. Zookeys 2021; 1033:191-201. [PMID: 33958926 PMCID: PMC8084859 DOI: 10.3897/zookeys.1033.66186] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/20/2021] [Accepted: 04/04/2021] [Indexed: 11/30/2022] Open
Abstract
Here we respond to the criticisms leveled against a proposal that suggested an efficient solution to the taxonomic impediment. We clarify some of our objectives and demonstrate that many of the criticisms apply more to traditional approaches to taxonomy rather than to our minimalist approach.
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Affiliation(s)
- Michael Sharkey
- The Hymenoptera Institute, 116 Franklin Ave., Redlands, CA 92373, USAThe Hymenoptera InstituteRedlandsUnited States of America
| | - Brian Brown
- Entomology Section, Natural History Museum of Los Angeles County, 900 Exposition Boulevard, Los Angeles, CA 90007, USANatural History Museum of Los Angeles CountyLos AngelesUnited States of America
| | - Austin Baker
- Department of Entomology, University of California, Riverside, CA, USAUniversity of CaliforniaRiversideUnited States of America
| | - Marko Mutanen
- Ecology and Genetics Research Unit, University of Oulu, FinlandUniversity of OuluOuluFinland
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18
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Dincă V, Dapporto L, Somervuo P, Vodă R, Cuvelier S, Gascoigne-Pees M, Huemer P, Mutanen M, Hebert PDN, Vila R. High resolution DNA barcode library for European butterflies reveals continental patterns of mitochondrial genetic diversity. Commun Biol 2021; 4:315. [PMID: 33750912 PMCID: PMC7943782 DOI: 10.1038/s42003-021-01834-7] [Citation(s) in RCA: 28] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/05/2020] [Accepted: 02/11/2021] [Indexed: 11/09/2022] Open
Abstract
The study of global biodiversity will greatly benefit from access to comprehensive DNA barcode libraries at continental scale, but such datasets are still very rare. Here, we assemble the first high-resolution reference library for European butterflies that provides 97% taxon coverage (459 species) and 22,306 COI sequences. We estimate that we captured 62% of the total haplotype diversity and show that most species possess a few very common haplotypes and many rare ones. Specimens in the dataset have an average 95.3% probability of being correctly identified. Mitochondrial diversity displayed elevated haplotype richness in southern European refugia, establishing the generality of this key biogeographic pattern for an entire taxonomic group. Fifteen percent of the species are involved in barcode sharing, but two thirds of these cases may reflect the need for further taxonomic research. This dataset provides a unique resource for conservation and for studying evolutionary processes, cryptic species, phylogeography, and ecology.
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Affiliation(s)
- Vlad Dincă
- Ecology and Genetics Research Unit, PO Box 3000, University of Oulu, 90014, Oulu, Finland.
- Institut de Biologia Evolutiva (CSIC-UPF), 03008, Barcelona, Spain.
| | - Leonardo Dapporto
- ZEN lab, Dipartimento di Biologia, University of Florence, 50019, Sesto Fiorentino, Italy
| | - Panu Somervuo
- Organismal and Evolutionary Biology Research Programme, University of Helsinki, FI-00014, Helsinki, Finland
| | | | - Sylvain Cuvelier
- VVE Workgroup Butterflies, Diamantstraat 4, 8900, Ieper, Belgium
| | | | - Peter Huemer
- Naturwissenschaftliche Sammlungen, Sammlungs- und Forschungszentrum, Tiroler Landesmuseen, 6060, Hall in Tirol, Austria
| | - Marko Mutanen
- Ecology and Genetics Research Unit, PO Box 3000, University of Oulu, 90014, Oulu, Finland
| | - Paul D N Hebert
- Centre for Biodiversity Genomics, University of Guelph, Guelph, ON, N1G 2W1, Canada
| | - Roger Vila
- Institut de Biologia Evolutiva (CSIC-UPF), 03008, Barcelona, Spain
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19
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Sharkey MJ, Janzen DH, Hallwachs W, Chapman EG, Smith MA, Dapkey T, Brown A, Ratnasingham S, Naik S, Manjunath R, Perez K, Milton M, Hebert P, Shaw SR, Kittel RN, Solis MA, Metz MA, Goldstein PZ, Brown JW, Quicke DL, van Achterberg C, Brown BV, Burns JM. Minimalist revision and description of 403 new species in 11 subfamilies of Costa Rican braconid parasitoid wasps, including host records for 219 species. Zookeys 2021; 1013:1-665. [PMID: 34512087 PMCID: PMC8390796 DOI: 10.3897/zookeys.1013.55600] [Citation(s) in RCA: 44] [Impact Index Per Article: 14.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/19/2020] [Accepted: 09/30/2020] [Indexed: 02/07/2023] Open
Abstract
Three new genera are described: Michener (Proteropinae), Bioalfa (Rogadinae), and Hermosomastax (Rogadinae). Keys are given for the New World genera of the following braconid subfamilies: Agathidinae, Braconinae, Cheloninae, Homolobinae, Hormiinae, Ichneutinae, Macrocentrinae, Orgilinae, Proteropinae, Rhysipolinae, and Rogadinae. In these subfamilies 416 species are described or redescribed. Most of the species have been reared and all but 13 are new to science. A consensus sequence of the COI barcodes possessed by each species is employed to diagnose the species, and this approach is justified in the introduction. Most descriptions consist of a lateral or dorsal image of the holotype, a diagnostic COI consensus barcode, the Barcode Index Number (BIN) code with a link to the Barcode of Life Database (BOLD), and the holotype specimen information required by the International Code of Zoological Nomenclature. The following species are treated and those lacking authorship are newly described here with authorship attributable to Sharkey except for the new species of Macrocentrinae which are by Sharkey & van Achterberg: AGATHIDINAE: Aerophiluspaulmarshi, Mesocoelusdavidsmithi, Neothlipsisbobkulai, Plesiocoelusvanachterbergi, Pneumagathiserythrogastra (Cameron, 1905), Therophilusbobwhartoni, T.donaldquickei, T.gracewoodae, T.maetoi, T.montywoodi, T.penteadodiasae, Zacremnopsbrianbrowni, Z.coatlicue Sharkey, 1990, Zacremnopscressoni (Cameron, 1887), Z.ekchuah Sharkey, 1990, Z.josefernandezi, Zelomorphasarahmeierottoae. BRACONINAE: Braconalejandromarini, B.alejandromasisi, B.alexamasisae, B.andresmarini, B.andrewwalshi, B.anniapicadoae, B.anniemoriceae, B.barryhammeli, B.bernardoespinozai, B.carlossanabriai, B.chanchini, B.christophervallei, B.erasmocoronadoi, B.eugeniephillipsae, B.federicomatarritai, B.frankjoycei, B.gerardovegai, B.germanvegai, B.isidrochaconi, B.jimlewisi, B.josejaramilloi, B.juanjoseoviedoi, B.juliodiazi, B.luzmariaromeroae, B.manuelzumbadoi, B.marialuisariasae, B.mariamartachavarriae, B.mariorivasi, B.melissaespinozae, B.nelsonzamorai, B.nicklaphami, B.ninamasisae, B.oliverwalshi, B.paulamarinae, B.rafamoralesi, B.robertofernandezi, B.rogerblancoi, B.ronaldzunigai, B.sigifredomarini, B.tihisiaboshartae, B.wilberthbrizuelai, Digonogastramontylloydi, D.montywoodi, D.motohasegawai, D.natwheelwrighti, D.nickgrishini. CHELONINAE: Adeliusadrianguadamuzi, A.gauldi Shimbori & Shaw, 2019, A.janzeni Shimbori & Shaw, 2019, Ascogastergloriasihezarae, A.grettelvegae, A.guillermopereirai, A.gustavoecheverrii, A.katyvandusenae, A.luisdiegogomezi, Chelonusalejandrozaldivari, C.gustavogutierrezi, C.gustavoinduni, C.harryramirezi, C.hartmanguidoi, C.hazelcambroneroae, C.iangauldi, C.isidrochaconi, C.janecheverriae, C.jeffmilleri, C.jennyphillipsae, C.jeremydewaardi, C.jessiehillae, C.jesusugaldei, C.jimlewisi, C.jimmilleri, C.jimwhitfieldi, C.johanvalerioi, C.johnburnsi, C.johnnoyesi, C.jorgebaltodanoi, C.jorgehernandezi, C.josealfredohernandezi, C.josefernandeztrianai, C.josehernandezcortesi, C.josemanuelperezi, C.josephinerodriguezae, C.juanmatai, C.junkoshimurae, C.kateperezae, C.luciariosae, C.luzmariaromeroae, C.manuelpereirai, C.manuelzumbadoi, C.marianopereirai, C.maribellealvarezae, C.markmetzi, C.markshawi, C.martajimenezae, C.mayrabonillae, C.meganmiltonae, C.melaniamunozae, C.michaelstroudi, C.michellevanderbankae, C.mingfangi, C.minorcarmonai, C.monikaspringerae, C.moniquegilbertae, C.motohasegawai, C.nataliaivanovae, C.nelsonzamorai, C.normwoodleyi, C.osvaldoespinozai, C.pamelacastilloae, C.paulgoldsteini, C.paulhansoni, C.paulheberti, C.petronariosae, C.ramyamanjunathae, C.randallgarciai, C.rebeccakittelae, C.robertoespinozai, C.robertofernandezi, C.rocioecheverriae, C.rodrigogamezi, C.ronaldzunigai, C.rosibelelizondoae, C.rostermoragai, C.ruthfrancoae, C.scottmilleri, C.scottshawi, C.sergioriosi, C.sigifredomarini, C.stevearonsoni, C.stevestroudi, C.sujeevanratnasinghami, C.sureshnaiki, C.torbjornekremi, C.yeimycedenoae, Leptodrepanaalexisae, L.erasmocoronadoi, L.felipechavarriai, L.freddyquesadai, L.gilbertfuentesi, L.manuelriosi, Phanerotomaalmasolisae, P.alvaroherrerai, P.anacordobae, P.anamariamongeae, P.andydeansi, P.angelagonzalezae, P.angelsolisi, P.barryhammeli, P.bernardoespinozai, P.calixtomoragai, P.carolinacanoae, P.christerhanssoni, P.christhompsoni, P.davesmithi, P.davidduthiei, P.dirksteinkei, P.donquickei, P.duniagarciae, P.duvalierbricenoi, P.eddysanchezi, P.eldarayae, P.eliethcantillanoae, P.jenopappi, Pseudophanerotomaalanflemingi, Ps.albanjimenezi, Ps.alejandromarini, Ps.alexsmithi, Ps.allisonbrownae, Ps.bobrobbinsi. HOMOLOBINAE: Exasticolusjennyphillipsae, E.randallgarciai, E.robertofernandezi, E.sigifredomarini, E.tomlewinsoni. HORMIINAE: Hormiusanamariamongeae, H.angelsolisi, H.anniapicadoae, H.arthurchapmani, H.barryhammeli, H.carmenretanae, H.carloswalkeri, H.cesarsuarezi, H.danbrooksi, H.eddysanchezi, H.erikframstadi, H.georgedavisi, H.grettelvegae, H.gustavoinduni, H.hartmanguidoi, H.hectoraritai, H.hesiquiobenitezi, H.irenecanasae, H.isidrochaconi, H.jaygallegosi, H.jimbeachi, H.jimlewisi, H.joelcracrafti, H.johanvalerioi, H.johnburleyi, H.joncoddingtoni, H.jorgecarvajali, H.juanmatai, H.manuelzumbadoi, H.mercedesfosterae, H.modonnellyae, H.nelsonzamorai, H.pamelacastilloae, H.raycypessi, H.ritacolwellae, H.robcolwelli, H.rogerblancosegurai, H.ronaldzunigai, H.russchapmani, H.virginiaferrisae, H.warrenbrighami, H.willsflowersi. ICHNEUTINAE: Oligoneuruskriskrishtalkai, O.jorgejimenezi, Paroligoneuruselainehoaglandae, P.julianhumphriesi, P.mikeiviei. MACROCENTRINAE: Austrozelejorgecampabadali, A.jorgesoberoni, Dolichozelegravitarsis (Muesebeck, 1938), D.josefernandeztrianai, D.josephinerodriguezae, Hymenochaoniakalevikulli, H.kateperezae, H.katherinebaillieae, H.katherineellisonae, H.katyvandusenae, H.kazumifukunagae, H.keithlangdoni, H.keithwillmotti, H.kenjinishidai, H.kimberleysheldonae, H.krisnorvigae, H.lilianamadrigalae, H.lizlangleyae, Macrocentrusfredsingeri, M.geoffbarnardi, M.gregburtoni, M.gretchendailyae, M.grettelvegae, M.gustavogutierrezi, M.hannahjamesae, M.harisridhari, M.hillaryrosnerae, M.hiroshikidonoi, M.iangauldi, M.jennyphillipsae, M.jesseausubeli, M.jessemaysharkae, M.jimwhitfieldi, M.johnbrowni, M.johnburnsi, M.jonathanfranzeni, M.jonathanrosenbergi, M.jorgebaltodanoi, M.lucianocapelli. ORGILINAE: Orgilusamyrossmanae, O.carrolyoonae, O.christhompsoni, O.christinemcmahonae, O.dianalipscombae, O.ebbenielsoni, O.elizabethpennisiae, O.evertlindquisti, O.genestoermeri, O.jamesriegeri, O.jeanmillerae, O.jeffmilleri, O.jerrypowelli, O.jimtiedjei, O.johnlundbergi, O.johnpipolyi, O.jorgellorentei, O.larryspearsi, O.marlinricei, O.mellissaespinozae, O.mikesmithi, O.normplatnicki, O.peterrauchi, O.richardprimacki, O.sandraberriosae, O.sarahmirandae, O.scottmilleri, O.scottmorii, Stantoniabillalleni, S.brookejarvisae, S.donwilsoni, S.erikabjorstromae, S.garywolfi, S.henrikekmani, S.luismirandai, S.miriamzunzae, S.quentinwheeleri, S.robinkazmierae, S.ruthtifferae. PROTEROPINAE: Hebichneutestricolor Sharkey & Wharton, 1994, Proteropsiangauldi, P.vickifunkae, Michenercharlesi. RHYSIPOLINAE: Pseudorhysipolisluisfonsecai, P. mailyngonzalezaeRhysipolisjulioquirosi. ROGADINAE: Aleiodesadrianaradulovae, A.adrianforsythi, A.agnespeelleae, A.alaneaglei, A.alanflemingi, A.alanhalevii, A.alejandromasisi, A.alessandracallejae, A.alexsmithi, A.alfonsopescadori, A.alisundermieri, A.almasolisae, A.alvarougaldei, A.alvaroumanai, A.angelsolisi, A.annhowdenae, A.bobandersoni, A.carolinagodoyae, A.charlieobrieni, A.davefurthi, A.donwhiteheadi, A.doylemckeyi, A.frankhovorei, A.henryhowdeni, A.inga Shimbori & Shaw, 2020, A.johnchemsaki, A.johnkingsolveri, A.gonodontovorus Shimbori & Shaw, 2020, A.manuelzumbadoi, A.mayrabonillae, A.michelledsouzae, A.mikeiviei, A.normwoodleyi, A.pammitchellae, A.pauljohnsoni, A.rosewarnerae, A.steveashei, A.terryerwini, A.willsflowersi, Bioalfapedroleoni, B.alvarougaldei, B.rodrigogamezi, Choreborogasandydeansi, C.eladiocastroi, C.felipechavarriai, C.frankjoycei, Clinocentrusandywarreni, Cl.angelsolisi, Cystomastaxalexhausmanni, Cy.angelagonzalezae, Cy.ayaigarashiae, Hermosomastaxclavifemorus Quicke sp. nov., Heterogamusdonstonei, Pseudoyeliconesbernsweeneyi, Stiropiusbencrairi, S.berndkerni, S.edgargutierrezi, S.edwilsoni, S.ehakernae, Triraphisbillfreelandi, T.billmclarneyi, T.billripplei, T.bobandersoni, T.bobrobbinsi, T.bradzlotnicki, T.brianbrowni, T.brianlaueri, T.briannestjacquesae, T.camilocamargoi, T.carlosherrerai, T.carolinepalmerae, T.charlesmorrisi, T.chigiybinellae, T.christerhanssoni, T.christhompsoni, T.conniebarlowae, T.craigsimonsi, T.defectus Valerio, 2015, T.danielhubi, T.davidduthiei, T.davidwahli, T.federicomatarritai, T.ferrisjabri, T.mariobozai, T.martindohrni, T.matssegnestami, T.mehrdadhajibabaei, T.ollieflinti, T.tildalauerae, Yeliconesdirksteinkei, Y.markmetzi, Y.monserrathvargasae, Y.tricolor Quicke, 1996. Y.woldai Quicke, 1996. The following new combinations are proposed: Neothlipsissmithi (Ashmead), new combination for Microdussmithi Ashmead, 1894; Neothlipsispygmaeus (Enderlein), new combination for Microduspygmaeus Enderlein, 1920; Neothlipsisunicinctus (Ashmead), new combination for Microdusunicinctus Ashmead, 1894; Therophilusanomalus (Bortoni and Penteado-Dias) new combination for Plesiocoelusanomalus Bortoni and Penteado-Dias, 2015; Aerophilusareolatus (Bortoni and Penteado-Dias) new combination for Plesiocoelusareolatus Bortoni and Penteado-Dias, 2015; Pneumagathiserythrogastra (Cameron) new combination for Agathiserythrogastra Cameron, 1905. Dolichozelecitreitarsis (Enderlein), new combination for Paniscozelecitreitarsis Enderlein, 1920. Dolichozelefuscivertex (Enderlein) new combination for Paniscozelefuscivertex Enderlein, 1920. Finally, Bassusbrooksi Sharkey, 1998 is synonymized with Agathiserythrogastra Cameron, 1905; Paniscozelegriseipes Enderlein, 1920 is synonymized with Dolichozelekoebelei Viereck, 1911; Paniscozelecarinifrons Enderlein, 1920 is synonymized with Dolichozelefuscivertex (Enderlein, 1920); and Paniscozelenigricauda Enderlein,1920 is synonymized with Dolichozelequaestor (Fabricius, 1804). (originally described as Ophionquaestor Fabricius, 1804).
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Affiliation(s)
- Michael J. Sharkey
- The Hymenoptera Institute, 116 Franklin Ave., Redlands, CA, 92373, USAThe Hymenoptera InstituteRedlandsUnited States of America
| | - Daniel H. Janzen
- Department of Biology, University of Pennsylvania, Philadelphia, PA 19104-6018, USAUniversity of PennsylvaniaPhiladelphiaUnited States of America
| | - Winnie Hallwachs
- Department of Biology, University of Pennsylvania, Philadelphia, PA 19104-6018, USAUniversity of PennsylvaniaPhiladelphiaUnited States of America
| | - Eric G. Chapman
- Department of Entomology, University of Kentucky, Lexington, KY 40546-0091, USAUniversity of KentuckyLexingtonUnited States of America
| | - M. Alex Smith
- Department of Integrative Biology, University of Guelph and Biodiversity Institute of Ontario, Guelph, CanadaUniversity of GuelphGuelphCanada
| | - Tanya Dapkey
- Academy of Natural Sciences, 1900 Benjamin Franklin Parkway, Philadelphia, PA 19103, USAAcademy of Natural SciencesPhiladelphiaUnited States of America
| | - Allison Brown
- Academy of Natural Sciences, 1900 Benjamin Franklin Parkway, Philadelphia, PA 19103, USAAcademy of Natural SciencesPhiladelphiaUnited States of America
| | - Sujeevan Ratnasingham
- Academy of Natural Sciences, 1900 Benjamin Franklin Parkway, Philadelphia, PA 19103, USAAcademy of Natural SciencesPhiladelphiaUnited States of America
| | - Suresh Naik
- Academy of Natural Sciences, 1900 Benjamin Franklin Parkway, Philadelphia, PA 19103, USAAcademy of Natural SciencesPhiladelphiaUnited States of America
| | - Ramya Manjunath
- Academy of Natural Sciences, 1900 Benjamin Franklin Parkway, Philadelphia, PA 19103, USAAcademy of Natural SciencesPhiladelphiaUnited States of America
| | - Kate Perez
- Academy of Natural Sciences, 1900 Benjamin Franklin Parkway, Philadelphia, PA 19103, USAAcademy of Natural SciencesPhiladelphiaUnited States of America
| | - Megan Milton
- Academy of Natural Sciences, 1900 Benjamin Franklin Parkway, Philadelphia, PA 19103, USAAcademy of Natural SciencesPhiladelphiaUnited States of America
| | - Paul Hebert
- Academy of Natural Sciences, 1900 Benjamin Franklin Parkway, Philadelphia, PA 19103, USAAcademy of Natural SciencesPhiladelphiaUnited States of America
| | - Scott R. Shaw
- Department of Ecosystem Science, University of Wyoming, 1000 East University Avenue, Laramie, Wyoming 82071, USAUniversity of WyomingLaramieUnited States of America
| | - Rebecca N. Kittel
- Museum Wiesbaden, Hessisches Landesmuseum für Kunst und Natur, Friedrich-Ebert-Allee 2, 65185 Wiesbaden, GermanyHessisches Landesmuseum für Kunst und NaturWiesbadenGermany
| | - M. Alma Solis
- Systematic Entomology Laboratory, Beltsville Agriculture Research Center, Agricultural Research Service, U.S. Department of Agriculture, c/o National Museum Natural History, MRC 168, Smithsonian Institution, P.O. Box 37012, Washington, DC, 20013-7012, USAU.S. Department of AgricultureWashingtonUnited States of America
| | - Mark A. Metz
- Systematic Entomology Laboratory, Beltsville Agriculture Research Center, Agricultural Research Service, U.S. Department of Agriculture, c/o National Museum Natural History, MRC 168, Smithsonian Institution, P.O. Box 37012, Washington, DC, 20013-7012, USAU.S. Department of AgricultureWashingtonUnited States of America
| | - Paul Z. Goldstein
- Systematic Entomology Laboratory, Beltsville Agriculture Research Center, Agricultural Research Service, U.S. Department of Agriculture, c/o National Museum Natural History, MRC 168, Smithsonian Institution, P.O. Box 37012, Washington, DC, 20013-7012, USAU.S. Department of AgricultureWashingtonUnited States of America
| | - John W. Brown
- Division of Entomology, PO Box 37012 12. National Museum of Natural History E515 MRC127, Washington, DC 20013-7012, USANatural History Museum of Los Angeles CountyLos AngelesUnited States of America
| | - Donald L.J. Quicke
- Department of Biology, Faculty of Life Sciences, Chulalongkorn University, Bangkok, ThailandNational Museum of Natural HistoryWashingtonUnited States of America
| | - C. van Achterberg
- Naturalis Biodiversity Center, Postbus 9517, 2300 RA Leiden, The NetherlandsChulalongkorn UniversityBangkokThailand
| | - Brian V. Brown
- Department of Entomology, Natural History Museum of Los Angeles County, 900 Exposition Boulevard, Los Angeles, CA, 90007, USANaturalis Biodiversity CenterLeidenNetherlands
| | - John M. Burns
- Division of Entomology, PO Box 37012 12. National Museum of Natural History E515 MRC127, Washington, DC 20013-7012, USANatural History Museum of Los Angeles CountyLos AngelesUnited States of America
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Ballesteros Mejia L, Arnal P, Hallwachs W, Haxaire J, Janzen D, Kitching IJ, Rougerie R. A global food plant dataset for wild silkmoths and hawkmoths and its use in documenting polyphagy of their caterpillars (Lepidoptera: Bombycoidea: Saturniidae, Sphingidae). Biodivers Data J 2020; 8:e60027. [PMID: 33343218 PMCID: PMC7746661 DOI: 10.3897/bdj.8.e60027] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/26/2020] [Accepted: 11/30/2020] [Indexed: 11/12/2022] Open
Abstract
Background Herbivorous insects represent a major fraction of global biodiversity and the relationships they have established with their food plants range from strict specialists to broad generalists. Our knowledge of these relationships is of primary importance to basic (e.g. the study of insect ecology and evolution) and applied biology (e.g. monitoring of pest or invasive species) and yet remains very fragmentary and understudied. In Lepidoptera, caterpillars of families Saturniidae and Sphingidae are rather well known and considered to have adopted contrasting preferences in their use of food plants. The former are regarded as being rather generalist feeders, whereas the latter are more specialist. New information To assemble and synthesise the vast amount of existing data on food plants of Lepidoptera families Saturniidae and Sphingidae, we combined three major existing databases to produce a dataset collating more than 26,000 records for 1256 species (25% of all species) in 121 (67%) and 167 (81%) genera of Saturniidae and Sphingidae, respectively. This dataset is used here to document the level of polyphagy of each of these genera using summary statistics, as well as the calculation of a polyphagy score derived from the analysis of Phylogenetic Diversity of the food plants used by the species in each genus.
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Affiliation(s)
- Liliana Ballesteros Mejia
- CESAB, Centre de Synthèse et d'Analyse sur la Biodiversité, Montpellier, France CESAB, Centre de Synthèse et d'Analyse sur la Biodiversité Montpellier France.,Institut de Systématique, Evolution, Biodiversité (ISYEB), Muséum national d'Histoire naturelle, CNRS,Sorbonne Université, EPHE, Université des Antilles (1st authorship shared between the first two authors), Paris, France Institut de Systématique, Evolution, Biodiversité (ISYEB), Muséum national d'Histoire naturelle, CNRS,Sorbonne Université, EPHE, Université des Antilles (1st authorship shared between the first two authors) Paris France.,Ecologie, Systématique and Evolution, Université Paris-Sud, CNRS, AgroParisTech, Université Paris-Saclay, Orsay, France Ecologie, Systématique and Evolution, Université Paris-Sud, CNRS, AgroParisTech, Université Paris-Saclay Orsay France
| | - Pierre Arnal
- Institut de Systématique, Evolution, Biodiversité (ISYEB), Muséum national d'Histoire naturelle, CNRS,Sorbonne Université, EPHE, Université des Antilles (1st authorship shared between the first two authors), Paris, France Institut de Systématique, Evolution, Biodiversité (ISYEB), Muséum national d'Histoire naturelle, CNRS,Sorbonne Université, EPHE, Université des Antilles (1st authorship shared between the first two authors) Paris France
| | - Winnie Hallwachs
- Department of Biology, University of Pennsylvania, Philadelphia, United States of America Department of Biology, University of Pennsylvania Philadelphia United States of America
| | - Jean Haxaire
- Correspondent of Muséum national d'Histoire naturelle, Paris, France Correspondent of Muséum national d'Histoire naturelle Paris France.,Associate researcher of Insectarium de Montréal, Quebec, Canada Associate researcher of Insectarium de Montréal Quebec Canada
| | - Daniel Janzen
- University of Pennsylvania, Philadelphia, United States of America University of Pennsylvania Philadelphia United States of America
| | - Ian J Kitching
- Department of Life Sciences, Natural History Museum, London, United Kingdom Department of Life Sciences, Natural History Museum London United Kingdom
| | - Rodolphe Rougerie
- Institut de Systématique, Evolution, Biodiversité (ISYEB), Muséum national d'Histoire naturelle, CNRS,Sorbonne Université, EPHE, Université des Antilles (1st authorship shared between the first two authors), Paris, France Institut de Systématique, Evolution, Biodiversité (ISYEB), Muséum national d'Histoire naturelle, CNRS,Sorbonne Université, EPHE, Université des Antilles (1st authorship shared between the first two authors) Paris France
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21
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Wöger R, Wöger R, Nuss M. DNA barcodes for Aotearoa New Zealand Pyraloidea (Lepidoptera). Biodivers Data J 2020; 8:e58841. [PMID: 33293886 PMCID: PMC7718215 DOI: 10.3897/bdj.8.e58841] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/21/2020] [Accepted: 10/09/2020] [Indexed: 11/24/2022] Open
Abstract
Identification of pyraloid species is often hampered by highly similar external morphology requiring microscopic dissection of genitalia. This becomes especially obvious when mass samples from ecological studies or insect monitoring have to be analysed. DNA barcode sequences could accelerate identification, but are not available for most pyraloid species from New Zealand. Hence, we are presenting a first DNA-barcode library for this group, providing 440 COI barcodes (cytochrome C oxidase I sequences) for 73 morphologically-identified species, which is 29% of Pyraloidea known from New Zealand. Results are analysed using the Barcode Index Number system (BIN) of BOLD and the Automatic Barcode Gap Discovery method (ABGD). Using BIN, the 440 barcodes reveal 82 clusters. A perfect match between BIN assignment and morphological identification was found for 63 species (86.3%). Four species (5.5%) share BINs, each with two species in one BIN, of which Glaucocharis epiphaea and Glaucocharis harmonica even share the same barcode. In contrast, six species (8.2%) split into two or more BINs, with the highest number of five BINs for Orocrambus ramosellus. The interspecific variation of all collected specimens of New Zealand Pyraloidea averages 12.54%. There are deep intraspecific divergences (> 2%) in seven species, for instance Orocrambus vulgaris with up to 6.6% and Scoparia ustimacula with 5.5%. Using ABGD, the 440 barcodes reveal 71 or 88 operational taxonomic units (OTUs), depending on the preferred partition. A perfect match between OTU and morphological identification was found for 56 species (76.7%) or 62 species (84.9%). ABGD delivers four or seven species sharing OTUs and four or ten species split into more than one OTU. Morphological re-examination, as well as the analysis of a concatenated dataset of COI and the nuclear markers EF1α and GADPH for species split into more than one BIN or OTU, do not support a higher number of species. Likewise, there is no evidence for Wolbachia infection as a trigger for these sequence variations.
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Affiliation(s)
- Renate Wöger
- Senckenberg Museum of Zoology, Dresden, GermanySenckenberg Museum of ZoologyDresdenGermany
| | - Roland Wöger
- Senckenberg Museum of Zoology, Dresden, GermanySenckenberg Museum of ZoologyDresdenGermany
| | - Matthias Nuss
- Senckenberg Museum of Zoology, Dresden, GermanySenckenberg Museum of ZoologyDresdenGermany
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22
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Nitta JH, Ebihara A, Smith AR. A taxonomic and molecular survey of the pteridophytes of the Nectandra Cloud Forest Reserve, Costa Rica. PLoS One 2020; 15:e0241231. [PMID: 33206674 PMCID: PMC7673574 DOI: 10.1371/journal.pone.0241231] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/22/2020] [Accepted: 10/11/2020] [Indexed: 11/18/2022] Open
Abstract
Floristic surveys are crucial to the conservation of biodiversity, but the vast majority of such surveys are limited to listing species names, and few take into account the evolutionary history of species. Here, we combine classical taxonomic and molecular phylogenetic (DNA barcoding) approaches to catalog the biodiversity of pteridophytes (ferns and lycophytes) of the Nectandra Cloud Forest Reserve, Costa Rica. Surveys were carried out over three field seasons (2008, 2011, and 2013), resulting in 176 species representing 69 genera and 22 families of pteridophytes. Our literature survey of protected areas in Costa Rica shows that Nectandra has an exceptionally diverse pteridophyte flora for its size. Plastid rbcL was selected as a DNA barcode marker and obtained for >95% of pteridophyte taxa at this site. Combined molecular and morphological analyses revealed two previously undescribed taxa that appear to be of hybrid origin. The utility of rbcL for species identification was assessed by calculating minimum interspecific distances and found to have a failure rate of 18%. Finally we compared the distribution of minimum interspecific rbcL distances with two other areas that have been the focus of pteridophyte molecular surveys: Japan and Tahiti. The comparison shows that Nectandra is more similar to Japan than Tahiti, which may reflect the biogeographic history of these floras.
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Affiliation(s)
- Joel H. Nitta
- Department of Biological Sciences, Graduate School of Science, The University of Tokyo, Bunkyo-ku, Tokyo, Japan
| | - Atsushi Ebihara
- Department of Botany, National Museum of Nature and Science, Tsukuba, Ibaraki, Japan
| | - Alan R. Smith
- The University Herbarium, University of California at Berkeley, Berkeley, California, United States of America
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Pringle RM, Hutchinson MC. Resolving Food-Web Structure. ANNUAL REVIEW OF ECOLOGY, EVOLUTION, AND SYSTEMATICS 2020. [DOI: 10.1146/annurev-ecolsys-110218-024908] [Citation(s) in RCA: 24] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
Food webs are a major focus and organizing theme of ecology, but the data used to assemble them are deficient. Early debates over food-web data focused on taxonomic resolution and completeness, lack of which had produced spurious inferences. Recent data are widely believed to be much better and are used extensively in theoretical and meta-analytic research on network ecology. Confidence in these data rests on the assumptions ( a) that empiricists correctly identified consumers and their foods and ( b) that sampling methods were adequate to detect a near-comprehensive fraction of the trophic interactions between species. Abundant evidence indicates that these assumptions are often invalid, suggesting that most topological food-web data may remain unreliable for inferences about network structure and underlying ecological and evolutionary processes. Morphologically cryptic species are ubiquitous across taxa and regions, and many trophic interactions routinely evade detection by conventional methods. Molecular methods have diagnosed the severity of these problems and are a necessary part of the cure.
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Affiliation(s)
- Robert M. Pringle
- Department of Ecology and Evolutionary Biology, Princeton University, Princeton, New Jersey 08544, USA
| | - Matthew C. Hutchinson
- Department of Ecology and Evolutionary Biology, Princeton University, Princeton, New Jersey 08544, USA
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24
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Janzen DH, Hallwachs W, Pereira G, Blanco R, Masis A, Chavarria MM, Chavarria F, Guadamuz A, Araya M, Smith MA, Valerio J, Guido H, Sanchez E, Bermudez S, Perez K, Manjunath R, Ratnasingham S, St Jacques B, Milton M, DeWaard JR, Zakharov E, Naik S, Hajibabaei M, Hebert PDN, Hasegawa M. Using DNA-barcoded Malaise trap samples to measure impact of a geothermal energy project on the biodiversity of a Costa Rican old-growth rain forest. Genome 2020; 63:407-436. [PMID: 32579871 DOI: 10.1139/gen-2020-0002] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
We report one year (2013-2014) of biomonitoring an insect community in a tropical old-growth rain forest, during construction of an industrial-level geothermal electricity project. This is the first-year reaction by the species-rich insect biodiversity; six subsequent years are being analyzed now. The site is on the margin of a UNESCO Natural World Heritage Site, Área de Conservación Guanacaste (ACG), in northwestern Costa Rica. This biomonitoring is part of Costa Rica's ongoing efforts to sustainably retain its wild biodiversity through biodevelopmental integration with its societies. Essential tools are geothermal engineering needs, entomological knowledge, insect species-rich forest, government-NGO integration, common sense, DNA barcoding for species-level identification, and Malaise traps. This research is tailored for integration with its society at the product level. We combine an academic view with on-site engineering decisions. This biomonitoring requires alpha-level DNA barcoding combined with centuries of morphology-based entomological taxonomy and ecology. Not all desired insect community analyses are performed; they are for data from subsequent years combined with this year. We provide enough analysis to be used by both guilds now. This biomonitoring has shown, for the first year, that the geothermal project impacts only the biodiversity within a zone less than 50 m from the project margin.
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Affiliation(s)
- Daniel H Janzen
- Department of Biology, University of Pennsylvania, Philadelphia, PA 19104, USA
| | - Winnie Hallwachs
- Department of Biology, University of Pennsylvania, Philadelphia, PA 19104, USA
| | - Guillermo Pereira
- Programa Parataxónomos, Area de Conservacion Guanacaste, Apdo. 69-5000, Liberia, Costa Rica
| | - Roger Blanco
- Programa de Investigacion, Area de Conservacion Guanacaste, Apdo. 69-5000, Liberia, Costa Rica
| | - Alejandro Masis
- Director, Area de Conservacion Guanacaste, Apdo. 69-5000, Liberia, Costa Rica
| | | | - Felipe Chavarria
- Area de Conservacion Guanacaste, Apdo. 69-5000, Liberia, Costa Rica
| | - Adrian Guadamuz
- Programa Parataxónomos, Area de Conservacion Guanacaste, Apdo. 69-5000, Liberia, Costa Rica
| | - Magaly Araya
- Programa Parataxónomos, Area de Conservacion Guanacaste, Apdo. 69-5000, Liberia, Costa Rica
| | - M Alex Smith
- Department of Integrative Biology, University of Guelph, Guelph, ON N1G 2W1, Canada
| | | | | | | | | | - Kate Perez
- Centre for Biodiversity Genomics, University of Guelph, Guelph, ON N1G 2W1, Canada
| | - Ramya Manjunath
- Centre for Biodiversity Genomics, University of Guelph, Guelph, ON N1G 2W1, Canada
| | | | - Brianne St Jacques
- Centre for Biodiversity Genomics, University of Guelph, Guelph, ON N1G 2W1, Canada
| | - Megan Milton
- Centre for Biodiversity Genomics, University of Guelph, Guelph, ON N1G 2W1, Canada
| | - Jeremy R DeWaard
- Centre for Biodiversity Genomics, University of Guelph, Guelph, ON N1G 2W1, Canada
| | - Evgeny Zakharov
- Centre for Biodiversity Genomics, University of Guelph, Guelph, ON N1G 2W1, Canada
| | - Suresh Naik
- Centre for Biodiversity Genomics, University of Guelph, Guelph, ON N1G 2W1, Canada
| | - Mehrdad Hajibabaei
- Department of Integrative Biology, University of Guelph, Guelph, ON N1G 2W1, Canada
| | - Paul D N Hebert
- Centre for Biodiversity Genomics, University of Guelph, Guelph, ON N1G 2W1, Canada
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25
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Parks KS, Janzen DH, Hallwachs W, Fernández-Triana J, Dyer LA, Rodriguez JJ, Arias-Penna DC, Whitfield JB. A five-gene molecular phylogeny reveals Parapanteles Ashmead (Hymenoptera: Braconidae) to be polyphyletic as currently composed. Mol Phylogenet Evol 2020; 150:106859. [PMID: 32497831 DOI: 10.1016/j.ympev.2020.106859] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2019] [Revised: 05/18/2020] [Accepted: 05/21/2020] [Indexed: 11/15/2022]
Abstract
Parapanteles Ashmead (Braconidae: Microgastrinae) is a medium-sized genus of microgastrine wasps that was erected over a century ago and lacks a unique synapomorphic character, and its monophyly has not been tested by any means. Parapanteles usually are parasitoids of large, unconcealed caterpillars (macrolepidoptera) and have been reared from an unusually large diversity of hosts for a relatively small microgastrine genus. We used Cytochrome Oxidase I sequences ("DNA barcodes") available for Parapanteles and other microgastrines to sample the generic diversity of described and undescribed species currently placed in Parapanteles, and then sequenced four additional genes for this subsample (wingless, elongation factor 1-alpha, ribosomal subunit 28s, and NADH dehydrogenase subunit 1). We constructed individual gene trees and concatenated Bayesian and maximum-likelihood phylogenies for this 5-gene subsample. In these phylogenies, most Parapanteles species formed a monophyletic clade within another genus, Dolichogenidea, while the remaining Parapanteles species were recovered polyphyletically within several other genera. The latter likely represent misidentified members of other morphologically similar genera. Species in the monophyletic clade containing most Parapanteles parasitized caterpillars from only five families - Erebidae (Arctiinae), Geometridae, Saturniidae, Notodontidae, and Crambidae. We do not make any formal taxonomic decisions here because we were not able to include representatives of type species for Parapanteles or other relevant genera, and because we feel such decisions should be reserved until a comprehensive morphological analysis of the boundaries of these genera is accomplished.
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Affiliation(s)
- K S Parks
- Department of Entomology, University of Illinois Urbana-Champaign, Urbana, IL 61801, United States.
| | - D H Janzen
- Department of Biology, University of Pennsylvania, Philadelphia, PA 19104, United States.
| | - W Hallwachs
- Department of Biology, University of Pennsylvania, Philadelphia, PA 19104, United States.
| | | | - L A Dyer
- Department of Biology, Reno, NV 89557, United States.
| | - J J Rodriguez
- Department of Natural Sciences, University of Virginia's College at Wise, Wise, VA 24293, United States.
| | - D C Arias-Penna
- Department of Entomology, University of Illinois Urbana-Champaign, Urbana, IL 61801, United States
| | - J B Whitfield
- Department of Entomology, University of Illinois Urbana-Champaign, Urbana, IL 61801, United States.
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26
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Fleming AJ, Wood DM, Smith MA, Dapkey T, Hallwachs W, Janzen D. Revision of Telothyria van der Wulp (Diptera: Tachinidae) and twenty-five new species from Area de Conservación Guanacaste in northwestern Costa Rica with a key to Mesoamerican species. Biodivers Data J 2020; 8:e47157. [PMID: 32390755 PMCID: PMC7200895 DOI: 10.3897/bdj.8.e47157] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/08/2019] [Accepted: 04/21/2020] [Indexed: 11/12/2022] Open
Abstract
Background We describe 25 new species in the genus Telothyria van der Wulp, 1890 from Area de Conservación Guanacaste (ACG) in northwestern Costa Rica. All species herein described were reared from an ongoing inventory of wild-caught caterpillars spanning two families (Lepidoptera: Crambidae, and Tortricidae). Our study provides a concise description of each new species using morphology, life history, molecular data, and photographic documentation; a redescription of the genus, and its type species as well as a revised key to species of Telothyria occurring in the Mesoamerican region. We also suggest seven new synonymies resulting in 11 new combinations. New information The following 25 new species of Telothyria are described: T.aidanisp. n., T.alexanderisp. n., T.auranticrussp. n., T.auriolussp. n., T.bicuspidatasp. n., T.carolinacanoaesp. n., T.clavatasp. n., T.cristatasp. n., T.diniamartinezaesp. n., T.duniagarciaesp. n., T.duvalierbricenoisp. n., T.eldaarayaesp. n., T.erythropygasp. n., T.fimbriatasp. n., T.fulgidasp. n., T.gloriashihezaraesp. n., T.griseasp. n., T.harryramirezisp. n., T.incisasp. n., T.manuelpereiraisp. n., T.obscurasp. n., T.omissasp. n., T.osvaldoespinozaisp. n., T.peltatasp. n., and T.ricardocaleroisp. n. The following are proposed by Fleming & Wood as new generic synonyms of Telothyria: Comatacta Coquillett Syn. n., Floradalia Thompson Syn. n., Ptilomyia Curran Syn. n., Ptilomyiopsis Townsend Syn. n., Ptilomyoides Curran Syn. n., EuptilomyiaSyn. n., Eutelothyria Townsend Syn. n. The following new combinations are proposed as a result of the new synonymies: Telothyriabequaerti (Curran, 1925) Comb. n., Telothyriacruenta (Giglio-Tos, 1893) Comb. n., Telothyriafrontalis (Townsend, 1939) Comb. n., Telothyriainsularis (Curran, 1927) Comb. n., Telothyriaitaquaquecetubae (Townsend, 1931) Comb. n., Telothyriamajor (Thompson, 1963) Comb. n., Telothyriamicropalpus (Curran, 1925) Comb. n., Telothyriaminor (Thompson, 1963) Comb. n., Telothyrianautlana (Townsend, 1908) Comb. n., Telothyriaplumata (Curran, 1925) Comb. n., Telothyriatrinitatis (Thompson, 1963) Comb. n., Telothyriavariegata (Fabricius, 1805) Comb. n.Muscatricincta Fabricius is synonymized under Telothyriavariegata Fabricius, Syn. n. Telothyriaschineri Fleming & Wood nom. n. is proposed as a replacement name for Miltogrammabrevipennis Schiner. Additionally we provide redescriptions of two previously named species: the type species Telothyriacupreiventris (van der Wulp) due to its being the type species, and Telothyriarelicta (van der Wulp) due to its having been reared as an outcome of the inventory.
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Affiliation(s)
- A J Fleming
- Agriculture and Agri-Food Canada, Ottawa, Canada Agriculture and Agri-Food Canada Ottawa Canada
| | - D Monty Wood
- Agriculture and Agri-Food Canada, Ottawa, Canada Agriculture and Agri-Food Canada Ottawa Canada
| | - M Alex Smith
- University of Guelph, Guelph, Canada University of Guelph Guelph Canada
| | - Tanya Dapkey
- University of Pennsylvania, Philadelphia, United States of America University of Pennsylvania Philadelphia United States of America
| | - Winnie Hallwachs
- University of Pennsylvania, Philadelphia, United States of America University of Pennsylvania Philadelphia United States of America
| | - Daniel Janzen
- University of Pennsylvania, Philadelphia, United States of America University of Pennsylvania Philadelphia United States of America
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27
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Huemer P, Karsholt O, Aarvik L, Berggren K, Bidzilya O, Junnilainen J, Landry JF, Mutanen M, Nupponen K, Segerer A, Šumpich J, Wieser C, Wiesmair B, Hebert PDN. DNA barcode library for European Gelechiidae (Lepidoptera) suggests greatly underestimated species diversity. Zookeys 2020; 921:141-157. [PMID: 32256152 PMCID: PMC7109146 DOI: 10.3897/zookeys.921.49199] [Citation(s) in RCA: 19] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/08/2019] [Accepted: 02/06/2020] [Indexed: 11/12/2022] Open
Abstract
For the first time, a nearly complete barcode library for European Gelechiidae is provided. DNA barcode sequences (COI gene – cytochrome c oxidase 1) from 751 out of 865 nominal species, belonging to 105 genera, were successfully recovered. A total of 741 species represented by specimens with sequences ≥ 500bp and an additional ten species represented by specimens with shorter sequences were used to produce 53 NJ trees. Intraspecific barcode divergence averaged only 0.54% whereas distance to the Nearest-Neighbour species averaged 5.58%. Of these, 710 species possessed unique DNA barcodes, but 31 species could not be reliably discriminated because of barcode sharing or partial barcode overlap. Species discrimination based on the Barcode Index System (BIN) was successful for 668 out of 723 species which clustered from minimum one to maximum 22 unique BINs. Fifty-five species shared a BIN with up to four species and identification from DNA barcode data is uncertain. Finally, 65 clusters with a unique BIN remained unidentified to species level. These putative taxa, as well as 114 nominal species with more than one BIN, suggest the presence of considerable cryptic diversity, cases which should be examined in future revisionary studies.
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Affiliation(s)
- Peter Huemer
- Naturwissenschaftliche Sammlungen, Tiroler Landesmuseen Betriebsges.m.b.H., Innsbruck, Austria Tiroler Landesmuseen Betriebsges.m.b.H. Innsbruck Austria
| | - Ole Karsholt
- Zoological Museum, Natural History Museum of Denmark, Copenhagen, Denmark Natural History Museum of Denmark Copenhagen Denmark
| | - Leif Aarvik
- Natural History Museum, University of Oslo, Oslo, Norway University of Oslo Oslo Norway
| | - Kai Berggren
- Kristiansand, Norway Unaffiliated Kristiansand Norway
| | - Oleksiy Bidzilya
- Institute for Evolutionary Ecology of the National Academy of Sciences of Ukraine, Kiev, Ukraine Institute for Evolutionary Ecology, National Academy of Sciences of Ukraine Kiev Ukraine
| | - Jari Junnilainen
- Finnish Museum of Natural History, Zoology Unit, Helsinki, Finland Finnish Museum of Natural History Helsinki Finland
| | - Jean-François Landry
- Canadian National Collection of Insects, Arachnids, and Nematodes, Ottawa Research and Development Centre, Agriculture and Agri-Food Canada, Ottawa, Canada Agriculture and Agri-Food Canada Ottawa Canada
| | - Marko Mutanen
- Department of Ecology and Genetics, University of Oulu, Finland University of Oulu Oulu Finland
| | | | - Andreas Segerer
- SNSB-Zoological State Collection, Munich, Germany Zoological State Collection Munich Germany
| | - Jan Šumpich
- National Museum, Natural History Museum, Department of Entomology, Praha, Czech Republic Natural History Museum Prague Czech Republic
| | - Christian Wieser
- Landesmuseum Kärnten, Klagenfurt, Austria Landesmuseum Kärnten Klagenfurt am Wörthersee Austria
| | - Benjamin Wiesmair
- Naturwissenschaftliche Sammlungen, Tiroler Landesmuseen Betriebsges.m.b.H., Innsbruck, Austria Tiroler Landesmuseen Betriebsges.m.b.H. Innsbruck Austria
| | - Paul D N Hebert
- Centre for Biodiversity Genomics, University of Guelph, Guelph, Canada University of Guelph Guelph Canada
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28
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Fernandez-Triana J, Shaw MR, Boudreault C, Beaudin M, Broad GR. Annotated and illustrated world checklist of Microgastrinae parasitoid wasps (Hymenoptera, Braconidae). Zookeys 2020; 920:1-1090. [PMID: 32390740 PMCID: PMC7197271 DOI: 10.3897/zookeys.920.39128] [Citation(s) in RCA: 19] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/15/2019] [Accepted: 12/14/2019] [Indexed: 12/03/2022] Open
Abstract
A checklist of world species of Microgastrinae parasitoid wasps (Hymenoptera: Braconidae) is provided. A total of 81 genera and 2,999 extant species are recognized as valid, including 36 nominal species that are currently considered as species inquirendae. Two genera are synonymized under Apanteles. Nine lectotypes are designated. A total of 318 new combinations, three new replacement names, three species name amendments, and seven species status revised are proposed. Additionally, three species names are treated as nomina dubia, and 52 species names are considered as unavailable names (including 14 as nomina nuda). A total of three extinct genera and 12 extinct species are also listed. Unlike in many previous treatments of the subfamily, tribal concepts are judged to be inadequate, so genera are listed alphabetically. Brief diagnoses of all Microgastrinae genera, as understood in this paper, are presented. Illustrations of all extant genera (at least one species per genus, usually more) are included to showcase morphological diversity. Primary types of Microgastrinae are deposited in 108 institutions worldwide, although 76% are concentrated in 17 collections. Localities of primary types, in 138 countries, are reported. Recorded species distributions are listed by biogeographical region and by country. Microgastrine wasps are recorded from all continents except Antarctica; specimens can be found in all major terrestrial ecosystems, from 82°N to 55°S, and from sea level up to at least 4,500 m a.s.l. The Oriental (46) and Neotropical (43) regions have the largest number of genera recorded, whereas the Palaearctic region (28) is the least diverse. Currently, the highest species richness is in the Palearctic region (827), due to more historical study there, followed by the Neotropical (768) and Oriental (752) regions, which are expected to be the most species rich. Based on ratios of Lepidoptera and Microgastrinae species from several areas, the actual world diversity of Microgastrinae is expected to be between 30,000–50,000 species; although these ratios were mostly based on data from temperate areas and thus must be treated with caution, the single tropical area included had a similar ratio to the temperate ones. Almost 45,000 specimens of Microgastrinae from 67 different genera (83% of microgastrine genera) have complete or partial DNA barcode sequences deposited in the Barcode of Life Data System; the DNA barcodes represent 3,545 putative species or Barcode Index Numbers (BINs), as estimated from the molecular data. Information on the number of sequences and BINs per genus are detailed in the checklist. Microgastrinae hosts are here considered to be restricted to Eulepidoptera, i.e., most of the Lepidoptera except for the four most basal superfamilies (Micropterigoidea, Eriocranioidea, Hepialoidea and Nepticuloidea), with all previous literature records of other insect orders and those primitive Lepidoptera lineages being considered incorrect. The following nomenclatural acts are proposed: 1) Two genera are synonymyzed under Apanteles: Cecidobracon Kieffer & Jörgensen, 1910, new synonym and Holcapanteles Cameron, 1905, new synonym; 2) Nine lectotype designations are made for Alphomelondisputabile (Ashmead, 1900), Alphomelonnigriceps (Ashmead, 1900), Cotesiasalebrosa (Marshall, 1885), Diolcogasterxanthaspis (Ashmead, 1900), Dolichogenideaononidis (Marshall, 1889), Glyptapantelesacraeae (Wilkinson, 1932), Glyptapantelesguyanensis (Cameron, 1911), Glyptapantelesmilitaris (Walsh, 1861), and Pseudapantelesannulicornis Ashmead, 1900; 3) Three new replacement names are a) Diolcogasteraurangabadensis Fernandez-Triana, replacing Diolcogasterindicus (Rao & Chalikwar, 1970) [nec Diolcogasterindicus (Wilkinson, 1927)], b) Dolichogenideaincystatae Fernandez-Triana, replacing Dolichogenidealobesia Liu & Chen, 2019 [nec Dolichogenidealobesia Fagan-Jeffries & Austin, 2019], and c) Microplitisvitobiasi Fernandez-Triana, replacing Microplitisvariicolor Tobias, 1964 [nec Microplitisvaricolor Viereck, 1917]; 4) Three names amended are Apantelesirenecarrilloae Fernandez-Triana, 2014, Cotesiaayerzai (Brèthes, 1920), and Cotesiariverai (Porter, 1916); 5) Seven species have their status revised: Cotesiaarctica (Thomson, 1895), Cotesiaokamotoi (Watanabe, 1921), Cotesiaukrainica (Tobias, 1986), Dolichogenideaappellator (Telenga, 1949), Dolichogenideamurinanae (Capek & Zwölfer, 1957), Hypomicrogasteracarnas Nixon, 1965, and Nyererianigricoxis (Wilkinson, 1932); 6) New combinations are given for 318 species: Alloplitiscongensis, Alloplitisdetractus, Apantelesasphondyliae, Apantelesbraziliensis, Apantelessulciscutis, Choerasaper, Choerasapollion, Choerasdaphne, Choerasfomes, Choerasgerontius, Choerashelle, Choerasirates, Choeraslibanius, Choeraslongiterebrus, Choerasloretta, Choerasrecusans, Choerassordidus, Choerasstenoterga, Choerassuperbus, Choerassylleptae, Choerasvacillatrix, Choerasvacillatropsis, Choerasvenilia, Cotesiaasavari, Cotesiabactriana, Cotesiabambeytripla, Cotesiaberberidis, Cotesiabhairavi, Cotesiabiezankoi, Cotesiabifida, Cotesiacaligophagus, Cotesiacheesmanae, Cotesiacompressithorax, Cotesiadelphinensis, Cotesiaeffrena, Cotesiaeuphobetri, Cotesiaelaeodes, Cotesiaendii, Cotesiaeuthaliae, Cotesiaexelastisae, Cotesiahiberniae, Cotesiahyperion, Cotesiahypopygialis, Cotesiahypsipylae, Cotesiajujubae, Cotesialesbiae, Cotesialevigaster, Cotesializeri, Cotesiamalevola, Cotesiamalshri, Cotesiamenezesi, Cotesiamuzaffarensis, Cotesianeptisis, Cotesianycteus, Cotesiaoeceticola, Cotesiaoppidicola, Cotesiaopsiphanis, Cotesiapachkuriae, Cotesiapaludicolae, Cotesiaparbhanii, Cotesiaparvicornis, Cotesiapratapae, Cotesiaprozorovi, Cotesiapterophoriphagus, Cotesiaradiarytensis, Cotesiarangii, Cotesiariverai, Cotesiaruficoxis, Cotesiasenegalensis, Cotesiaseyali, Cotesiasphenarchi, Cotesiasphingivora, Cotesiatransuta, Cotesiaturkestanica, Diolcogasterabengouroui, Diolcogasteragama, Diolcogasterambositrensis, Diolcogasteranandra, Diolcogasterannulata, Diolcogasterbambeyi, Diolcogasterbicolorina, Diolcogastercariniger, Diolcogastercincticornis, Diolcogastercingulata, Diolcogastercoronata, Diolcogastercoxalis, Diolcogasterdipika, Diolcogasterearina, Diolcogasterepectina, Diolcogasterepectinopsis, Diolcogastergrangeri, Diolcogasterheterocera, Diolcogasterhomocera, Diolcogasterindica, Diolcogasterinsularis, Diolcogasterkivuana, Diolcogastermediosulcata, Diolcogastermegaulax, Diolcogasterneglecta, Diolcogasternigromacula, Diolcogasterpalpicolor, Diolcogasterpersimilis, Diolcogasterplecopterae, Diolcogasterplutocongoensis, Diolcogasterpsilocnema, Diolcogasterrufithorax, Diolcogastersemirufa, Diolcogasterseyrigi, Diolcogastersubtorquata, Diolcogastersulcata, Diolcogastertorquatiger, Diolcogastertristiculus, Diolcogasterturneri, Diolcogastervulcana, Diolcogasterwittei, Distatrixanthedon, Distatrixcerales, Distatrixcuspidalis, Distatrixeuproctidis, Distatrixflava, Distatrixgeometrivora, Distatrixmaia, Distatrixtookei, Distatrixtermina, Distatrixsimulissima, Dolichogenideaagamedes, Dolichogenideaaluella, Dolichogenideaargiope, Dolichogenideaatreus, Dolichogenideabakeri, Dolichogenideabasiflava, Dolichogenideabersa, Dolichogenideabiplagae, Dolichogenideabisulcata, Dolichogenideacatonix, Dolichogenideachrysis, Dolichogenideacoffea, Dolichogenideacoretas, Dolichogenideacyane, Dolichogenideadiaphantus, Dolichogenideadiparopsidis, Dolichogenideadryas, Dolichogenideaearterus, Dolichogenideaensiger, Dolichogenideaeros, Dolichogenideaevadne, Dolichogenideafalcator, Dolichogenideagelechiidivoris, Dolichogenideagobica, Dolichogenideahyalinis, Dolichogenideairiarte, Dolichogenidealakhaensis, Dolichogenidealampe, Dolichogenidealaspeyresiella, Dolichogenidealatistigma, Dolichogenidealebene, Dolichogenidealucidinervis, Dolichogenideamalacosomae, Dolichogenideamaro, Dolichogenideamendosae, Dolichogenideamonticola, Dolichogenideanigra, Dolichogenideaolivierellae, Dolichogenideaparallelis, Dolichogenideapelopea, Dolichogenideapelops, Dolichogenideaphaenna, Dolichogenideapisenor, Dolichogenidearoepkei, Dolichogenideascabra, Dolichogenideastatius, Dolichogenideastenotelas, Dolichogenideastriata, Dolichogenideawittei, Exoryzaasotae, Exoryzabelippicola, Exoryzahylas, Exoryzamegagaster, Exoryzaoryzae, Glyptapantelesaggestus, Glyptapantelesagynus, Glyptapantelesaithos, Glyptapantelesamenophis, Glyptapantelesantarctiae, Glyptapantelesanubis, Glyptapantelesarginae, Glyptapantelesargus, Glyptapantelesatylana, Glyptapantelesbadgleyi, Glyptapantelesbataviensis, Glyptapantelesbistonis, Glyptapantelesborocerae, Glyptapantelescacao, Glyptapantelescadei, Glyptapantelescinyras, Glyptapanteleseryphanidis, Glyptapanteleseuproctisiphagus, Glyptapanteleseutelus, Glyptapantelesfabiae, Glyptapantelesfulvigaster, Glyptapantelesfuscinervis, Glyptapantelesgahinga, Glyptapantelesglobatus, Glyptapantelesglyphodes, Glyptapantelesguierae, Glyptapanteleshorus, Glyptapantelesintricatus, Glyptapanteleslamprosemae, Glyptapanteleslefevrei, Glyptapantelesleucotretae, Glyptapanteleslissopleurus, Glyptapantelesmadecassus, Glyptapantelesmarquesi, Glyptapantelesmelanotus, Glyptapantelesmelissus, Glyptapantelesmerope, Glyptapantelesnaromae, Glyptapantelesnepitae, Glyptapantelesnigrescens, Glyptapantelesninus, Glyptapantelesnkuli, Glyptapantelesparasundanus, Glyptapantelespenelope, Glyptapantelespenthocratus, Glyptapantelesphilippinensis, Glyptapantelesphilocampus, Glyptapantelesphoebe, Glyptapantelesphytometraduplus, Glyptapantelespropylae, Glyptapantelespuera, Glyptapantelesseydeli, Glyptapantelessiderion, Glyptapantelessimus, Glyptapantelesspeciosissimus, Glyptapantelesspilosomae, Glyptapantelessubpunctatus, Glyptapantelesthespis, Glyptapantelesthoseae, Glyptapantelesvenustus, Glyptapanteleswilkinsoni, Hypomicrogastersamarshalli, Iconellacajani, Iconelladetrectans, Iconellajason, Iconellalynceus, Iconellapyrene, Iconellatedanius, Illidopsazamgarhensis, Illidopslamprosemae, Illidopstrabea, Keylimepiestriatus, Microplitisadisurae, Microplitismexicanus, Neoclarkinellaariadne, Neoclarkinellacurvinervus, Neoclarkinellasundana, Nyereriaituriensis, Nyererianioro, Nyereriaproagynus, Nyereriataoi, Nyereriavallatae, Parapantelesaethiopicus, Parapantelesalternatus, Parapantelesaso, Parapantelesatellae, Parapantelesbagicha, Parapantelescleo, Parapantelescyclorhaphus, Parapantelesdemades, Parapantelesendymion, Parapantelesepiplemicidus, Parapantelesexpulsus, Parapantelesfallax, Parapantelesfolia, Parapantelesfurax, Parapanteleshemitheae, Parapanteleshyposidrae, Parapantelesindicus, Parapantelesjavensis, Parapantelesjhaverii, Parapantelesmaculipalpis, Parapantelesmaynei, Parapantelesneocajani, Parapantelesneohyblaeae, Parapantelesnydia, Parapantelesprosper, Parapantelesprosymna, Parapantelespunctatissimus, Parapantelesregalis, Parapantelessarpedon, Parapantelessartamus, Parapantelesscultena, Parapantelestransvaalensis, Parapantelesturri, Parapantelesxanthopholis, Pholetesoracutus, Pholetesorbrevivalvatus, Pholetesorextentus, Pholetesoringenuoides, Pholetesorkuwayamai, Promicrogasterapidanus, Promicrogasterbriareus, Promicrogasterconopiae, Promicrogasteremesa, Promicrogastergrandicula, Promicrogasterorsedice, Promicrogasterrepleta, Promicrogastertyphon, Sathonbekilyensis, Sathonflavofacialis, Sathonlaurae, Sathonmikeno, Sathonruandanus, Sathonrufotestaceus, Venanidesastydamia, Venanidesdemeter, Venanidesparmula, and Venanidessymmysta.
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Affiliation(s)
- Jose Fernandez-Triana
- Canadian National Collection of Insects, Ottawa, CanadaCanadian National Collection of InsectsOttawaCanada
| | - Mark R. Shaw
- National Museums of Scotland, Edinburgh, UKNational Museums of ScotlandEdinburghUnited Kingdom
| | - Caroline Boudreault
- Canadian National Collection of Insects, Ottawa, CanadaCanadian National Collection of InsectsOttawaCanada
| | - Melanie Beaudin
- Department of Biology, Carleton University, Ottawa, CanadaCarleton UniversityOttawaCanada
| | - Gavin R. Broad
- Natural History Museum, London, UKNatural History MuseumLondonUnited Kingdom
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Zenker MM, Specht A, Fonseca VG. Assessing insect biodiversity with automatic light traps in Brazil: Pearls and pitfalls of metabarcoding samples in preservative ethanol. Ecol Evol 2020; 10:2352-2366. [PMID: 32184986 PMCID: PMC7069332 DOI: 10.1002/ece3.6042] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/18/2019] [Revised: 12/23/2019] [Accepted: 12/27/2019] [Indexed: 12/24/2022] Open
Abstract
Automated species identification based on data produced with metabarcoding offers an alternative for assessing biodiversity of bulk insect samples obtained with traps. We used a standard two-step PCR approach to amplify a 313 bp fragment of the barcoding region of the mitochondrial COI gene. The PCR products were sequenced on an Illumina MiSeq platform, and the OTUs production and taxonomic identifications were performed with a customized pipeline and database. The DNA used in the PCR procedures was extracted directly from the preservative ethanol of bulk insect samples obtained with automatic light traps in 12 sampling areas located in different biomes of Brazil, during wet and dry seasons. Agricultural field and forest edge habitats were collected for all sampling areas. A total of 119 insect OTUs and nine additional OTUs assigned to other arthropod taxa were obtained at a ≥97% sequence similarity level. The alpha and beta diversity analyses comparing biomes, habitats, and seasons were mostly inconclusive, except for a significant difference in beta diversity between biomes. In this study, we were able to metabarcode and HTS adult insects from their preservative medium. Notwithstanding, our results underrepresent the true magnitude of insect diversity expected from samples obtained with automatic light traps in Brazil. Although biological and technical factors might have impacted our results, measures to optimize and standardize eDNA HTS should be in place to improve taxonomic coverage of samples of unknown diversity and stored in suboptimal conditions, which is the case of most eDNA samples.
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Affiliation(s)
- Mauricio M. Zenker
- Zoological Research Museum Alexander KoenigBonnGermany
- Present address:
Rua Eulo MaroniSão PauloBrazil
| | - Alexandre Specht
- Embrapa CerradosBrasiliaBrazil
- Present address:
Embrapa CerradosPlanaltinaFederal DistrictBrazil
| | - Vera G. Fonseca
- Zoological Research Museum Alexander KoenigBonnGermany
- Present address:
Centre for EnvironmentFisheries and Aquaculture Science (Cefas)WeymouthUK
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30
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Bakker FT, Antonelli A, Clarke JA, Cook JA, Edwards SV, Ericson PGP, Faurby S, Ferrand N, Gelang M, Gillespie RG, Irestedt M, Lundin K, Larsson E, Matos-Maraví P, Müller J, von Proschwitz T, Roderick GK, Schliep A, Wahlberg N, Wiedenhoeft J, Källersjö M. The Global Museum: natural history collections and the future of evolutionary science and public education. PeerJ 2020; 8:e8225. [PMID: 32025365 PMCID: PMC6993751 DOI: 10.7717/peerj.8225] [Citation(s) in RCA: 47] [Impact Index Per Article: 11.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/18/2019] [Accepted: 11/15/2019] [Indexed: 12/27/2022] Open
Abstract
Natural history museums are unique spaces for interdisciplinary research and educational innovation. Through extensive exhibits and public programming and by hosting rich communities of amateurs, students, and researchers at all stages of their careers, they can provide a place-based window to focus on integration of science and discovery, as well as a locus for community engagement. At the same time, like a synthesis radio telescope, when joined together through emerging digital resources, the global community of museums (the ‘Global Museum’) is more than the sum of its parts, allowing insights and answers to diverse biological, environmental, and societal questions at the global scale, across eons of time, and spanning vast diversity across the Tree of Life. We argue that, whereas natural history collections and museums began with a focus on describing the diversity and peculiarities of species on Earth, they are now increasingly leveraged in new ways that significantly expand their impact and relevance. These new directions include the possibility to ask new, often interdisciplinary questions in basic and applied science, such as in biomimetic design, and by contributing to solutions to climate change, global health and food security challenges. As institutions, they have long been incubators for cutting-edge research in biology while simultaneously providing core infrastructure for research on present and future societal needs. Here we explore how the intersection between pressing issues in environmental and human health and rapid technological innovation have reinforced the relevance of museum collections. We do this by providing examples as food for thought for both the broader academic community and museum scientists on the evolving role of museums. We also identify challenges to the realization of the full potential of natural history collections and the Global Museum to science and society and discuss the critical need to grow these collections. We then focus on mapping and modelling of museum data (including place-based approaches and discovery), and explore the main projects, platforms and databases enabling this growth. Finally, we aim to improve relevant protocols for the long-term storage of specimens and tissues, ensuring proper connection with tomorrow’s technologies and hence further increasing the relevance of natural history museums.
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Affiliation(s)
- Freek T Bakker
- Biosystematics Group, Wageningen University & Research, Wageningen, The Netherlands
| | | | - Julia A Clarke
- Jackson School of Geosciences, University of Texas at Austin, Austin, TX, United States of America
| | - Joseph A Cook
- Museum of Southwestern Biology, Department of Biology, University of New Mexico, Albuquerque, NM, United States of America
| | - Scott V Edwards
- Department of Organismic and Evolutionary Biology, Museum of Comparative Zoology, Harvard University, Cambridge, MA, United States of America.,Gothenburg Centre for Advanced Studies in Science and Technology, Chalmers University of Technology and University of Gothenburg, Göteborg, Sweden
| | - Per G P Ericson
- Department of Bioinformatics and Genetics, Swedish Museum of Natural History, Stockholm, Sweden
| | - Søren Faurby
- Department of Biological and Environmental Sciences, Gothenburg Global Biodiversity Centre, University of Gothenburg, Göteborg, Sweden
| | - Nuno Ferrand
- Museu de História Natural e da Ciência, Universidade do Porto, Porto, Portugal
| | - Magnus Gelang
- Department of Zoology, Gothenburg Natural History Museum, Göteborg, Sweden.,Gothenburg Global Biodiversity Centre, University of Gothenburg, Göteborg, Sweden
| | - Rosemary G Gillespie
- Essig Museum of Entomology, Department of Environmental Science, Policy and Management, University of California, Berkeley, Berkeley, CA, United States of America
| | - Martin Irestedt
- Department of Bioinformatics and Genetics, Swedish Museum of Natural History, Stockholm, Sweden
| | - Kennet Lundin
- Department of Zoology, Gothenburg Natural History Museum, Göteborg, Sweden.,Gothenburg Global Biodiversity Centre, University of Gothenburg, Göteborg, Sweden
| | - Ellen Larsson
- Department of Biological and Environmental Sciences, Gothenburg Global Biodiversity Centre, University of Gothenburg, Göteborg, Sweden.,Gothenburg Global Biodiversity Centre, University of Gothenburg, Göteborg, Sweden
| | - Pável Matos-Maraví
- Biology Centre of the Czech Academy of Sciences, Institute of Entomology, České Budějovice, Czechia
| | - Johannes Müller
- Leibniz-Institut für Evolutions- und Biodiversitätsforschung, Museum für Naturkunde, Berlin, Germany
| | - Ted von Proschwitz
- Department of Zoology, Gothenburg Natural History Museum, Göteborg, Sweden.,Gothenburg Global Biodiversity Centre, University of Gothenburg, Göteborg, Sweden
| | - George K Roderick
- Essig Museum of Entomology, Department of Environmental Science, Policy and Management, University of California, Berkeley, Berkeley, CA, United States of America
| | - Alexander Schliep
- Department of Computer Science and Engineering, University of Gothenburg, Göteborg, Sweden
| | | | - John Wiedenhoeft
- Department of Computer Science and Engineering, University of Gothenburg, Göteborg, Sweden
| | - Mari Källersjö
- Gothenburg Global Biodiversity Centre, University of Gothenburg, Göteborg, Sweden.,Gothenburg Botanical Garden, Göteborg, Sweden
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31
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Janzen DH, Hallwachs W. Área de Conservación Guanacaste, northwestern Costa Rica: Converting a tropical national park to conservation
via
biodevelopment. Biotropica 2020. [DOI: 10.1111/btp.12755] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
Affiliation(s)
- Daniel H. Janzen
- Department of Biology University of Pennsylvania Philadelphia PA USA
| | - Winnie Hallwachs
- Department of Biology University of Pennsylvania Philadelphia PA USA
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Arias-Penna DC, Whitfield JB, Janzen DH, Winifred Hallwachs, Dyer LA, Smith MA, Hebert PD, Fernández-Triana JL. A species-level taxonomic review and host associations of Glyptapanteles (Hymenoptera, Braconidae, Microgastrinae) with an emphasis on 136 new reared species from Costa Rica and Ecuador. Zookeys 2019; 890:1-685. [PMID: 31798309 PMCID: PMC6881475 DOI: 10.3897/zookeys.890.35786] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/27/2019] [Accepted: 07/15/2019] [Indexed: 01/01/2023] Open
Abstract
The descriptive taxonomic study reported here is focused on Glyptapanteles, a species-rich genus of hymenopteran parasitoid wasps. The species were found within the framework of two independent long-term Neotropical caterpillar rearing projects: northwestern Costa Rica (Área de Conservación Guanacaste, ACG) and eastern Andes, Ecuador (centered on Yanayacu Biological Station, YBS). One hundred thirty-six new species of Glyptapanteles Ashmead are described and all of them are authored by Arias-Penna. None of them was recorded in both countries; thus, 78 are from Costa Rica and the remaining 58 from Ecuador. Before this revision, the number of Neotropical described Glyptapanteles did not reach double digits. Reasonable boundaries among species were generated by integrating three datasets: Cytochrome Oxidase I (COI) gene sequencing data, natural history (host records), and external morphological characters. Each species description is accompanied by images and known geographical distribution. Characteristics such as shape, ornamentation, and location of spun Glyptapanteles cocoons were imaged as well. Host-parasitoid associations and food plants are also here published for the first time. A total of 88 species within 84 genera in 15 Lepidoptera families was encountered as hosts in the field. With respect to food plants, these wild-caught parasitized caterpillars were reared on leaves of 147 species within 118 genera in 60 families. The majority of Glyptapanteles species appeared to be relatively specialized on one family of Lepidoptera or even on some much lower level of taxonomic refinement. Those herbivores in turn are highly food-plant specialized, and once caterpillars were collected, early instars (1-3) yielded more parasitoids than later instars. Glyptapanteles jimmilleri Arias-Penna, sp. nov. is the first egg-larval parasitoid recorded within the genus, though there may be many more since such natural history requires a more focused collection of eggs. The rate of hyperparasitoidism within the genus was approximately 4% and was represented by Mesochorus spp. (Ichneumonidae). A single case of multiparasitoidism was reported, Copidosoma floridanum Ashmead (Encyrtidae) and Glyptapanteles ilarisaaksjarvi Arias-Penna, sp. nov. both parasitoid species emerged from the caterpillar of Noctuidae: Condica cupienta (Cramer). Bodyguard behavior was observed in two Glyptapanteles species: G. howelldalyi Arias-Penna, sp. nov. and G. paulhansoni Arias-Penna, sp. nov. A dichotomous key for all the new species is provided. The numerous species described here, and an equal number already reared but not formally described, signal a far greater Glyptapanteles species richness in the Neotropics than suggested by the few described previously.
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Affiliation(s)
- Diana Carolina Arias-Penna
- Department of Entomology, University of Illinois, 320 Morrill Hall, 505 S. Goodwin Ave., Urbana, IL 61801, USA
| | - James B. Whitfield
- Department of Entomology, University of Illinois, 320 Morrill Hall, 505 S. Goodwin Ave., Urbana, IL 61801, USA
| | - Daniel H. Janzen
- Department of Biology, University of Pennsylvania, 102 Leidy Laboratories, 433 S. University Ave., Philadelphia, PA 19104, USA
| | - Winifred Hallwachs
- Department of Biology, University of Pennsylvania, 3400 Chestnut St, Philadelphia, PA 19104, USA
| | - Lee A. Dyer
- Department of Biology, University of Nevada, 1664 N. Virginia Street, Reno, NV 89557, USA
| | - M. Alex Smith
- Department of Integrative Biology, University of Guelph, 50 Stone Road East, Guelph, Ontario, N1G 2W1, Canada
| | - Paul D.N. Hebert
- Biodiversity Institute of Ontario, University of Guelph, 579 Gordon St., Guelph, Ontario, N1G 1Y2, Canada
| | - José L. Fernández-Triana
- Canadian National Collection of Insects, Agriculture and Agri-Food Canada, 960 Carling Avenue, Ottawa, Ontario, K1A 0C6, Canada
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33
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Goldstein PZ, Janzen D, Hallwachs W. Aprica: a new genus and life history for the pteridivore Xanthia patula Druce, 1898 (Lepidoptera, Noctuidae). Zookeys 2019; 866:127-145. [PMID: 31388326 PMCID: PMC6669218 DOI: 10.3897/zookeys.866.27647] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/19/2018] [Accepted: 05/31/2019] [Indexed: 12/01/2022] Open
Abstract
Aprica Goldstein, gen. nov. is described to accommodate Xanthiapatula Druce, 1898. Recent discovery of its larva, which has been recorded eating foliage of species in six families of leptosporangiate ferns, suggest a possible subfamily assignment within the Eriopinae, but this cannot be substantiated based on adult morphology. This species has no obvious close relatives either among the core noctuid pteridivore genera currently recognized in the Eriopinae (e.g., Callopistria Hübner, [1821]), nor among genera more recently discovered to be fern-feeders but which remain incertae sedis with respect to subfamily (e.g., Leucosigma Druce, 1908, Lophomyra Schaus, 1911). The recorded foodplant profile is similar to that of another ambiguously placed Nearctic species Fagitanalittera (Guenée, 1852) (Noctuidae: Noctuinae: Xylenini, incertae sedis) with which it shares no obvious synapomorphies.
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34
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Fleming AJ, Wood DM, Smith MA, Dapkey T, Hallwachs W, Janzen D. Twenty-two new species in the genus Hyphantrophaga Townsend (Diptera: Tachinidae) from Area de Conservación Guanacaste, with a key to the species of Mesoamerica. Biodivers Data J 2019; 7:e29553. [PMID: 31308823 PMCID: PMC6611774 DOI: 10.3897/bdj.7.e29553] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2018] [Accepted: 06/18/2019] [Indexed: 11/12/2022] Open
Abstract
Background We describe 22 new species in the genus Hyphantrophaga Townsend, 1892 (Diptera: Tachinidae) from Area de Conservación Guanacaste (ACG) in north-western Costa Rica. All species were reared from an ongoing inventory of wild-caught caterpillars spanning a variety of families (Lepidoptera: Bombycidae, Crambidae, Depressariidae, Doidae, Erebidae, Euteliidae, Gelechiidae, Geometridae, Hedylidae, Hesperiidae, Immidae, Lasiocampidae, Limacodidae, Megalopygidae, Mimaloniidae, Noctuidae, Nolidae, Notodontidae, Nymphalidae, Papilionidae, Pieridae, Phiditiidae, Pterophoridae, Pyralidae, Riodinidae, Saturniidae, Sphingidae, Thyrididae, Tortricidae and Zygaenidae). We provide a morphological description of each species together with information on life history, molecular data and photographic documentation. In addition to the new species, we provide a redescription of the genus, as well as the redescription of three previously described species, which were also collected within ACG during this study: Hyphantrophaga angustata (van der Wulp), Hyphantrophaga myersi (Aldrich) and Hyphantrophaga virilis (Aldrich & Webber). New information The following 22 new species of Hyphantrophaga are described: Hyphantrophaga adrianguadamuzi Fleming & Wood sp. n., Hyphantrophaga albopilosa Fleming & Wood sp. n., Hyphantrophaga anacordobae Fleming & Wood sp. n., Hyphantrophaga calixtomoragai Fleming & Wood sp. n., Hyphantrophaga calva Fleming & Wood sp. n.., Hyphantrophaga ciriloumanai Fleming & Wood sp. n., Hyphantrophaga danausophaga Fleming & Wood sp. n., Hyphantrophaga diniamartinezae Fleming & Wood sp. n., Hyphantrophaga duniagarciae Fleming & Wood sp. n., Hyphantrophaga edwinapui Fleming & Wood sp. n., Hyphantrophaga eldaarayae Fleming & Wood sp. n., Hyphantrophaga eliethcantillanoe Fleming & Wood sp. n., Hyphantrophaga gilberthampiei Fleming & Wood sp. n., Hyphantrophaga guillermopereirai Fleming & Wood sp. n., Hyphantrophaga hazelcambroneroae Fleming & Wood sp. n., Hyphantrophaga luciariosae Fleming & Wood sp. n., Hyphantrophaga manuelriosi Fleming & Wood sp. n., Hyphantrophaga morphophaga Fleming & Wood sp. n., Hyphantrophaga nigricauda Fleming & Wood sp. n., Hyphantrophaga osvaldoespinozai Fleming & Wood sp. n., Hyphantrophaga pabloumanai Fleming & Wood sp. n. and Hyphantrophaga similis Fleming & Wood sp. n.The following are proposed by Wood as new synonyms of Hyphantrophaga Townsend, 1892: Brachymasicera Townsend, 1911 syn. n., Ommasicera Townsend, 1911 syn. n., Ophirosturmia Townsend, 1911 syn. n., Patillalia Curran, 1934 syn. n. and Ypophaemyiops Townsend, 1935 syn. n.The following nine new combinations are proposed as a result of the new synonymies: Hyphantrophaga adamsoni (Thompson, 1963), comb. n., Hyphantrophaga fasciata (Curran, 1934), comb. n., Hyphantrophaga glauca (Giglio-Tos, 1893), comb. n., Hyphantrophaga gowdeyi (Curran, 1926), comb. n., Hyphantrophaga myersi (Aldrich, 1933), comb. n., Hyphantrophaga nigripes (Townsend, 1928), comb. n., Hyphantrophaga optica (Schiner, 1868), comb. n., Hyphantrophaga polita (Townsend, 1911), comb. n., Hyphantrophaga subpolita (Townsend, 1912), comb. n.
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Affiliation(s)
- A J Fleming
- Agriculture Agri-Food Canada, Ottawa, Canada Agriculture Agri-Food Canada Ottawa Canada
| | - D Monty Wood
- Agriculture Agri-Food Canada, Ottawa, Canada Agriculture Agri-Food Canada Ottawa Canada
| | - M Alex Smith
- University of Guelph, Guelph, Canada University of Guelph Guelph Canada
| | - Tanya Dapkey
- Department of Biology, University of Pennsylvania, Philadelphia, United States of America Department of Biology, University of Pennsylvania Philadelphia United States of America
| | - Winnie Hallwachs
- Department of Biology, University of Pennsylvania, Philadelphia, United States of America Department of Biology, University of Pennsylvania Philadelphia United States of America
| | - Daniel Janzen
- Department of Biology, University of Pennsylvania, Philadelphia, United States of America Department of Biology, University of Pennsylvania Philadelphia United States of America
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35
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Fernandez-Triana J, Boudreault C, Dapkey T, Alex Smith M, Hallwachs W, Janzen D. A revision of Dolichogenidea (Hymenoptera, Braconidae, Microgastrinae) with the second mediotergite broadly rectangular from Area de Conservación Guanacaste, Costa Rica. Zookeys 2019; 835:87-123. [PMID: 31043850 PMCID: PMC6477850 DOI: 10.3897/zookeys.835.33440] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/28/2019] [Accepted: 03/16/2019] [Indexed: 12/03/2022] Open
Abstract
The first species of Dolichogenidea (Hymenoptera: Braconidae, Microgastrinae) with the second mediotergite broadly quadrate to rectangular are revised, and eight new species from Area de Conservación Guanacaste (ACG), Costa Rica are described, all authored by Fernandez-Triana & Boudreault: alejandromasisi, angelagonzalezae, carlosmanuelrodriguezi, genuarnunezi, josealfredohernandezi, melaniamunozae, rogerblancoi, and yeimycedenoae. A new species group (carlosmanuelrodriguezi) within the genus is proposed to accommodate those species, as well as additional undescribed species from the Neotropical region found in collections. All new species are found in rainforests (120–900 m) and all are parasitoids of Depressariidae (except for one species parasitizing Choreutidae). The unique shape of the second mediotergite and long ovipositor are features shared with the alejandromorai species group in the genus Apanteles, an example of convergent evolution; both wasp groups also parasitize similar hosts in ACG.
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Affiliation(s)
- Jose Fernandez-Triana
- Canadian National Collection of insects, Ottawa, Canada Canadian National Collection of Insects Ottawa Canada
| | - Caroline Boudreault
- Canadian National Collection of insects, Ottawa, Canada Canadian National Collection of Insects Ottawa Canada
| | - Tanya Dapkey
- Department of Biology, University of Pennsylvania, Philadelphia, PA 19194, USA University of Pennsylvania Philadelphia United States of America
| | - M Alex Smith
- Department of Integrative Biology, University of Guelph, Guelph, Ontario, Canada University of Guelph Guelph Canada
| | - Winnie Hallwachs
- Department of Biology, University of Pennsylvania, Philadelphia, PA 19194, USA University of Pennsylvania Philadelphia United States of America
| | - Daniel Janzen
- Department of Biology, University of Pennsylvania, Philadelphia, PA 19194, USA University of Pennsylvania Philadelphia United States of America
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36
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Puschendorf R, Wallace M, Chavarría MM, Crawford AJ, Wynne F, Knight M, Janzen DH, Hallwachs W, Palmer C, Price SJ. Cryptic diversity and ranavirus infection of a critically endangered Neotropical frog before and after population collapse. Anim Conserv 2019. [DOI: 10.1111/acv.12498] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
Affiliation(s)
- R. Puschendorf
- School of Biological and Marine Sciences University of Plymouth Devon UK
| | - M. Wallace
- Department of Zoology University of Oxford Oxford UK
| | - M. M. Chavarría
- Programa de Investigación Área de Conservación Guanacaste Liberia Costa Rica
| | - A. J. Crawford
- Departamento de Ciencias Biológicas Universidad de los Andes Bogotá Colombia
| | - F. Wynne
- School of Biological and Marine Sciences University of Plymouth Devon UK
| | - M. Knight
- School of Biological and Marine Sciences University of Plymouth Devon UK
| | - D. H. Janzen
- Department of Biology University of Pennsylvania Philadelphia PA USA
| | - W. Hallwachs
- Department of Biology University of Pennsylvania Philadelphia PA USA
| | - C.V. Palmer
- School of Biological and Marine Sciences University of Plymouth Devon UK
| | - S. J. Price
- UCL Genetics Institute London UK
- Institute of Zoology, ZSL London UK
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Fleming AJ, Wood DM, Smith MA, Dapkey T, Hallwachs W, Janzen DH. A new species of Trismegistomya Reinhard (Diptera: Tachinidae) from Area de Conservación Guanacaste in northwestern Costa Rica. Biodivers Data J 2019; 7:e29130. [PMID: 31048976 PMCID: PMC6477854 DOI: 10.3897/bdj.7.e29130] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/16/2018] [Accepted: 03/27/2019] [Indexed: 11/24/2022] Open
Abstract
Background The New World genus Trismegistomya Reinhard, 1967b (Diptera: Tachinidae) previously included only the type species Trismegistomyapumilis (Reinhard, 1967a) from Arizona, U.S.A. New information We describe a new species of Trismegistomya, Trismegistomyajimoharai Fleming & Wood sp. n., from Area de Conservación Guanacaste (ACG) in northwestern Costa Rica, reared from wild-caught caterpillars of Melipotisjanuaris (Guenée, 1852) (Lepidoptera: Erebidae). Our study provides a concise description of the new species using morphology, life history, molecular data and photographic documentation. In addition to the new species description, we provide a redescription of the genus, as well as of its type species Trismegistomyapumilis.
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Affiliation(s)
- A J Fleming
- Agriculture Agri-Food Canada, Ottawa, Canada Agriculture Agri-Food Canada Ottawa Canada
| | - D Monty Wood
- Agriculture Agri-Food Canada, Ottawa, Canada Agriculture Agri-Food Canada Ottawa Canada
| | - M Alex Smith
- Department of Integrative Biology and the Biodiversity Institute of Ontario, Guelph, Canada Department of Integrative Biology and the Biodiversity Institute of Ontario Guelph Canada
| | - Tanya Dapkey
- Department of Biology, University of Pennsylvania, Philadelphia, United States of America Department of Biology, University of Pennsylvania Philadelphia United States of America
| | - Winnie Hallwachs
- Department of Biology, University of Pennsylvania, Philadelphia, United States of America Department of Biology, University of Pennsylvania Philadelphia United States of America
| | - Daniel H Janzen
- Department of Biology, University of Pennsylvania, Philadelphia, United States of America Department of Biology, University of Pennsylvania Philadelphia United States of America
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Li W, Cong Q, Shen J, Zhang J, Hallwachs W, Janzen DH, Grishin NV. Genomes of skipper butterflies reveal extensive convergence of wing patterns. Proc Natl Acad Sci U S A 2019; 116:6232-6237. [PMID: 30877254 PMCID: PMC6442542 DOI: 10.1073/pnas.1821304116] [Citation(s) in RCA: 59] [Impact Index Per Article: 11.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
For centuries, biologists have used phenotypes to infer evolution. For decades, a handful of gene markers have given us a glimpse of the genotype to combine with phenotypic traits. Today, we can sequence entire genomes from hundreds of species and gain yet closer scrutiny. To illustrate the power of genomics, we have chosen skipper butterflies (Hesperiidae). The genomes of 250 representative species of skippers reveal rampant inconsistencies between their current classification and a genome-based phylogeny. We use a dated genomic tree to define tribes (six new) and subtribes (six new), to overhaul genera (nine new) and subgenera (three new), and to display convergence in wing patterns that fooled researchers for decades. We find that many skippers with similar appearance are distantly related, and several skippers with distinct morphology are close relatives. These conclusions are strongly supported by different genomic regions and are consistent with some morphological traits. Our work is a forerunner to genomic biology shaping biodiversity research.
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Affiliation(s)
- Wenlin Li
- Department of Biophysics, University of Texas Southwestern Medical Center, Dallas, TX 75390-9050
- Department of Biochemistry, University of Texas Southwestern Medical Center, Dallas, TX 75390-9050
| | - Qian Cong
- Department of Biophysics, University of Texas Southwestern Medical Center, Dallas, TX 75390-9050
- Department of Biochemistry, University of Texas Southwestern Medical Center, Dallas, TX 75390-9050
| | - Jinhui Shen
- Department of Biophysics, University of Texas Southwestern Medical Center, Dallas, TX 75390-9050
- Department of Biochemistry, University of Texas Southwestern Medical Center, Dallas, TX 75390-9050
| | - Jing Zhang
- Department of Biophysics, University of Texas Southwestern Medical Center, Dallas, TX 75390-9050
- Department of Biochemistry, University of Texas Southwestern Medical Center, Dallas, TX 75390-9050
| | - Winnie Hallwachs
- Department of Biology, University of Pennsylvania, Philadelphia, PA 19104
| | - Daniel H Janzen
- Department of Biology, University of Pennsylvania, Philadelphia, PA 19104;
| | - Nick V Grishin
- Department of Biophysics, University of Texas Southwestern Medical Center, Dallas, TX 75390-9050;
- Department of Biochemistry, University of Texas Southwestern Medical Center, Dallas, TX 75390-9050
- Howard Hughes Medical Institute, University of Texas Southwestern Medical Center, Dallas, TX 75390-9050
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39
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Delabye S, Rougerie R, Bayendi S, Andeime-Eyene M, Zakharov EV, deWaard JR, Hebert PD, Kamgang R, Le Gall P, Lopez-Vaamonde C, Mavoungou JF, Moussavou G, Moulin N, Oslisly R, Rahola N, Sebag D, Decaëns T. Characterization and comparison of poorly known moth communities through DNA barcoding in two Afrotropical environments in Gabon. Genome 2019; 62:96-107. [DOI: 10.1139/gen-2018-0063] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
Biodiversity research in tropical ecosystems—popularized as the most biodiverse habitats on Earth—often neglects invertebrates, yet invertebrates represent the bulk of local species richness. Insect communities in particular remain strongly impeded by both Linnaean and Wallacean shortfalls, and identifying species often remains a formidable challenge inhibiting the use of these organisms as indicators for ecological and conservation studies. Here we use DNA barcoding as an alternative to the traditional taxonomic approach for characterizing and comparing the diversity of moth communities in two different ecosystems in Gabon. Though sampling remains very incomplete, as evidenced by the high proportion (59%) of species represented by singletons, our results reveal an outstanding diversity. With about 3500 specimens sequenced and representing 1385 BINs (Barcode Index Numbers, used as a proxy to species) in 23 families, the diversity of moths in the two sites sampled is higher than the current number of species listed for the entire country, highlighting the huge gap in biodiversity knowledge for this country. Both seasonal and spatial turnovers are strikingly high (18.3% of BINs shared between seasons, and 13.3% between sites) and draw attention to the need to account for these when running regional surveys. Our results also highlight the richness and singularity of savannah environments and emphasize the status of Central African ecosystems as hotspots of biodiversity.
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Affiliation(s)
- Sylvain Delabye
- Faculty of Science, University of South Bohemia in České Budějovice, Branišovská 1760, 37005, České Budjovice, Czech Republic
- Biology Center, Institute of Entomology, The Czech Academy of Science, Branišovská 31, 37005, České Budějovice, Czech Republic
| | - Rodolphe Rougerie
- Institut de Systématique, Evolution, Biodiversité (ISYEB), Muséum national d’Histoire naturelle, CNRS, Sorbonne Université, EPHE, 57 rue Cuvier, CP 50, 75005 Paris, France
| | - Sandrine Bayendi
- Institut de Recherches Agronomique et Forestière (IRAF–CENAREST), Libreville, Gabon
| | | | - Evgeny V. Zakharov
- Centre for Biodiversity Genomics, Biodiversity Institute of Ontario, University of Guelph, Guelph, ON N1G 2W1, Canada
| | - Jeremy R. deWaard
- Centre for Biodiversity Genomics, Biodiversity Institute of Ontario, University of Guelph, Guelph, ON N1G 2W1, Canada
| | - Paul D.N. Hebert
- Centre for Biodiversity Genomics, Biodiversity Institute of Ontario, University of Guelph, Guelph, ON N1G 2W1, Canada
| | - Roger Kamgang
- Laboratoire Evolution, Génomes, Comportement, Ecologie (EGCE UMR 247, IRD–CNRS–Université Paris-Sud), Avenue de la Terrasse, Bâtiment 13, Boite Postale 1, 91198 Gif sur Yvette, France
| | - Philippe Le Gall
- Laboratoire Evolution, Génomes, Comportement, Ecologie (EGCE UMR 247, IRD–CNRS–Université Paris-Sud), Avenue de la Terrasse, Bâtiment 13, Boite Postale 1, 91198 Gif sur Yvette, France
| | - Carlos Lopez-Vaamonde
- INRA, UR633, Zoologie Forestière, F-45075 Orléans, France; Institut de Recherche sur la Biologie de l’Insecte, UMR 7261 CNRS, Université de Tours, UFR Sciences et Techniques, Tours, France
| | - Jacques-François Mavoungou
- Institut de Recherches en Ecologie Tropicale (IRET–CENAREST), Libreville, Gabon
- Département de Biologie, Faculté des Sciences, Université des Sciences et Techniques de Masuku, BP 943, Franceville, Gabon
| | - Ghislain Moussavou
- Institut de Recherches en Ecologie Tropicale (IRET–CENAREST), Libreville, Gabon
| | - Nicolas Moulin
- Nicolas Moulin Entomologiste, 82 route de l’Ecole, 76680 Montérolier, France
| | - Richard Oslisly
- Agence Nationale des Parcs Nationaux (ANPN), BP 20379, Libreville, Gabon
- Laboratoire Patrimoines Locaux et Gouvernance (PALOC) UMR 208, IRD-MNHN, 57 rue Cuvier - Case Postale 26, 75231 Paris cedex 05, France
| | - Nil Rahola
- International Centre for Medical Research (CIRMF), Franceville, Gabon
| | - David Sebag
- Normandie Université, UNIROUEN, UNICAEN, CNRS, M2C UMR 6143, Place Emile Blondel - Bâtiment IRESE A, 76821 Mont Saint Aignan Cedex, France
| | - Thibaud Decaëns
- Centre d’Ecologie Fonctionnelle et Evolutive (CEFE UMR 5175, CNRS–Université de Montpellier–Université Paul-Valéry Montpellier–EPHE), 1919 Route de Mende, F-34293 Montpellier, France
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Goldstein PZ, Janzen DH, Proshek B, Dapkey T, Hallwachs W. Review of Lophomyra Schaus, 1911 (Lepidoptera, Noctuidae): a new combination and re-descriptions of species newly associated with ferns (Polypodiaceae). Zookeys 2018:135-165. [PMID: 30337827 PMCID: PMC6189221 DOI: 10.3897/zookeys.788.21235] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2017] [Accepted: 04/08/2018] [Indexed: 11/12/2022] Open
Abstract
Lophomyra Schaus, 1911 (Noctuidae) is the smaller of two noctuid genera originally described by Schaus that include species recently associated with ferns (Pteridophyta), in this case Polypodiaceae, as larval food plants. Following an examination of type material and reared specimens accompanied by DNA barcode data, Lophomyra is revised to include L.tacita Schaus, 1911, L.santista (Jones, 1914), and L.commixta (Schaus, 1914), comb. n., the last of which is transferred from Chytonidia Schaus, 1914 (= Leucosigma Druce, 1908). Lophomyra is characterized based on adult and larval morphology, especially that of the male genitalia. Structures associated with the valvae are discussed with reference to dissected and in situ images. Larvae of L.commixta and L.tacita are described from images, and the recorded food plants of both species are discussed in the context of known New World noctuid pteridivores.
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Affiliation(s)
- Paul Z Goldstein
- Systematic Entomology Laboratory, USDA, National Museum of Natural History, E-502, P.O. Box 37012, MRC 168, Washington, DC 20013-7012 National Museum of Natural History Washington United States of America
| | - Daniel H Janzen
- Department of Biology, University of Pennsylvania, Philadelphia, PA 19104 University of Pennsylvania Philadelphia United States of America
| | - Benjamin Proshek
- Systematic Entomology Laboratory, USDA, National Museum of Natural History, E-502, P.O. Box 37012, MRC 168, Washington, DC 20013-7012 National Museum of Natural History Washington United States of America
| | - Tanya Dapkey
- Department of Biology, University of Pennsylvania, Philadelphia, PA 19104 University of Pennsylvania Philadelphia United States of America
| | - Winnie Hallwachs
- Department of Biology, University of Pennsylvania, Philadelphia, PA 19104 University of Pennsylvania Philadelphia United States of America
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Goldstein PZ, Janzen DH, Proshek B, Dapkey T, Hallwachs W. A review of Leucosigma Druce, 1908: a newly discovered case of fern-feeding and descriptions of three new species (Lepidoptera, Noctuidae). Zookeys 2018:87-133. [PMID: 30337826 PMCID: PMC6189229 DOI: 10.3897/zookeys.788.21222] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2017] [Accepted: 04/05/2018] [Indexed: 11/30/2022] Open
Abstract
Chytonidia Schaus, 1914, is one of two noctuine genera originally described by Schaus that includes species recently found to feed on fern foliage (Pteridophyta) as larvae. By examining museum specimens, including type material and reared specimens accompanied by DNA barcode data, Chytonidia Schaus, 1914, syn. n. is synonymized with Leucosigma Druce, 1908, all currently recognized species are re-described, including males of three species described from female holotypes, and three new species are described: Leucosigmasolisae Goldstein, sp. n., Leucosigmapoolei Goldstein, sp. n., and L.schausi Goldstein, sp. n. Images of adults and, where available, larvae as well as dissected genitalia are presented, with a key to adults.
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Affiliation(s)
- Paul Z Goldstein
- Systematic Entomology Laboratory, USDA, National Museum of Natural History, P.O. Box 37012, MRC 168, Washington, DC 20013-7012, USA
| | - Daniel H Janzen
- Department of Biology, University of Pennsylvania, Philadelphia, PA 19104, USA
| | - Benjamin Proshek
- Systematic Entomology Laboratory, USDA, National Museum of Natural History, P.O. Box 37012, MRC 168, Washington, DC 20013-7012, USA
| | - Tanya Dapkey
- Department of Biology, University of Pennsylvania, Philadelphia, PA 19104, USA
| | - Winnie Hallwachs
- Department of Biology, University of Pennsylvania, Philadelphia, PA 19104, USA
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Orton MG, May JA, Ly W, Lee DJ, Adamowicz SJ. Is molecular evolution faster in the tropics? Heredity (Edinb) 2018; 122:513-524. [PMID: 30202084 PMCID: PMC6461915 DOI: 10.1038/s41437-018-0141-7] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2017] [Revised: 06/26/2018] [Accepted: 06/28/2018] [Indexed: 11/30/2022] Open
Abstract
The evolutionary speed hypothesis (ESH) suggests that molecular evolutionary rates are higher among species inhabiting warmer environments. Previously, the ESH has been investigated using small numbers of latitudinally-separated sister lineages; in animals, these studies typically focused on subsets of Chordata and yielded mixed support for the ESH. This study analyzed public DNA barcode sequences from the cytochrome c oxidase subunit I (COI) gene for six of the largest animal phyla (Arthropoda, Chordata, Mollusca, Annelida, Echinodermata, and Cnidaria) and paired latitudinally-separated taxa together informatically. Of 8037 lineage pairs, just over half (51.6%) displayed a higher molecular rate in the lineage inhabiting latitudes closer to the equator, while the remainder (48.4%) displayed a higher rate in the higher-latitude lineage. To date, this study represents the most comprehensive analysis of latitude-related molecular rate differences across animals. While a statistically-significant pattern was detected from our large sample size, our findings suggest that the EHS may not serve as a strong universal mechanism underlying the latitudinal diversity gradient and that COI molecular clocks may generally be applied across latitudes. This study also highlights the merits of using automation to analyze large DNA barcode datasets.
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Affiliation(s)
- Matthew G Orton
- Department of Integrative Biology & Biodiversity Institute of Ontario, University of Guelph, 50 Stone Road East, Guelph, ON, N1G 2W1, Canada.,School of Biological Sciences and Applied Chemistry, Seneca College, 1750 Finch Ave E, North York, ON, M2J 2X5, Canada
| | - Jacqueline A May
- Department of Integrative Biology & Biodiversity Institute of Ontario, University of Guelph, 50 Stone Road East, Guelph, ON, N1G 2W1, Canada
| | - Winfield Ly
- School of Biological Sciences and Applied Chemistry, Seneca College, 1750 Finch Ave E, North York, ON, M2J 2X5, Canada
| | - David J Lee
- School of Biological Sciences and Applied Chemistry, Seneca College, 1750 Finch Ave E, North York, ON, M2J 2X5, Canada
| | - Sarah J Adamowicz
- Department of Integrative Biology & Biodiversity Institute of Ontario, University of Guelph, 50 Stone Road East, Guelph, ON, N1G 2W1, Canada.
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Insect diversity in the Saharo-Arabian region: Revealing a little-studied fauna by DNA barcoding. PLoS One 2018; 13:e0199965. [PMID: 29985924 PMCID: PMC6037371 DOI: 10.1371/journal.pone.0199965] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/13/2018] [Accepted: 06/18/2018] [Indexed: 11/19/2022] Open
Abstract
Although insects dominate the terrestrial fauna, sampling constraints and the poor taxonomic knowledge of many groups have limited assessments of their diversity. Passive sampling techniques and DNA-based species assignments now make it possible to overcome these barriers. For example, Malaise traps collect specimens with minimal intervention while the Barcode Index Number (BIN) system automates taxonomic assignments. The present study employs Malaise traps and DNA barcoding to extend understanding of insect diversity in one of the least known zoogeographic regions, the Saharo-Arabian. Insects were collected at four sites in three countries (Egypt, Pakistan, Saudi Arabia) by deploying Malaise traps. The collected specimens were analyzed by sequencing 658 bp of cytochrome oxidase I (DNA barcode) and assigning BINs on the Barcode of Life Data Systems. The year-long deployment of a Malaise trap in Pakistan and briefer placements at two Egyptian sites and at one in Saudi Arabia collected 53,092 specimens. They belonged to 17 insect orders with Diptera and Hymenoptera dominating the catch. Barcode sequences were recovered from 44,432 (84%) of the specimens, revealing the occurrence of 3,682 BINs belonging to 254 families. Many of these taxa were uncommon as 25% of the families and 50% of the BINs from Pakistan were only present in one sample. Family and BIN counts varied significantly through the year, but diversity indices did not. Although more than 10,000 specimens were analyzed from each nation, just 2% of BINs were shared by Pakistan and Saudi Arabia, 4% by Egypt and Pakistan, and 7% by Egypt and Saudi Arabia. The present study demonstrates how the BIN system can circumvent the barriers imposed by limited access to taxonomic specialists and by the fact that many insect species in the Saharo-Arabian region are undescribed.
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Mayence C, Mathien C, Sanna A, Houcke S, Tabard P, Roux A, Valentin C, Resiere D, Lemonnier D, Nkont Cho F, Hommel D, Fan HW, Kallel H. Lonomia caterpillar envenoming in French Guiana reversed by the Brazilian antivenom: A successful case of international cooperation for a rare but deadly tropical hazard. Toxicon 2018; 151:74-78. [PMID: 29890231 DOI: 10.1016/j.toxicon.2018.06.068] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/17/2018] [Revised: 05/31/2018] [Accepted: 06/08/2018] [Indexed: 11/28/2022]
Abstract
In the American continent, larval forms (caterpillars) of the Lonomia genus can cause systemic reactions in human beings. In this Paper, we report the third case of Lonomia envenoming recorded in French Guiana in 25 years, and the first in which specific antivenom was administered. Severe symptoms of the envenoming were observed in our patient including pain; coagulopathy and systemic hemorrhage. They are caused by skin contact with caterpillars. Recovery, however, was quite satisfactory thanks to the international cooperation of the health authorities in both France and Brazil.
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Affiliation(s)
- C Mayence
- Intensive Care Unit, Cayenne General Hospital, French Guiana
| | - C Mathien
- Intensive Care Unit, Cayenne General Hospital, French Guiana
| | - A Sanna
- Regional Authority of Health, French Guiana
| | - S Houcke
- Intensive Care Unit, Cayenne General Hospital, French Guiana
| | - P Tabard
- Regional Authority of Health, French Guiana
| | - A Roux
- Intensive Care Unit, Cayenne General Hospital, French Guiana
| | - C Valentin
- Emergency Department, Kourou Hospital, French Guiana
| | - D Resiere
- Intensive Care Unit, Fort de France University Hospital, Martinique
| | - D Lemonnier
- Pharmacy Department, Cayenne General Hospital, French Guiana
| | | | - D Hommel
- Intensive Care Unit, Cayenne General Hospital, French Guiana
| | - H W Fan
- Butantan Institute, Sao Paulo, Brazil
| | - H Kallel
- Intensive Care Unit, Cayenne General Hospital, French Guiana.
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Sheldon KS, Huey RB, Kaspari M, Sanders NJ. Fifty Years of Mountain Passes: A Perspective on Dan Janzen’s Classic Article. Am Nat 2018; 191:553-565. [DOI: 10.1086/697046] [Citation(s) in RCA: 62] [Impact Index Per Article: 10.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
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46
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Whitfield JB, Nuelle RJ, Nuelle RJ. A new species of Cotesia Cameron (Hymenoptera, Braconidae, Microgastrinae) reared from the hickory horned devil, Citheronia regalis, and luna moth, Actias luna, in east Texas. Zookeys 2018:35-44. [PMID: 29674887 PMCID: PMC5904485 DOI: 10.3897/zookeys.740.242226] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/05/2018] [Accepted: 02/14/2018] [Indexed: 11/29/2022] Open
Abstract
The braconid wasp parasitoid Cotesianuellorum Whitfield, new species, is described from specimens reared from a caterpillar of the hickory horned devil, Citheroniaregalis (F.), and from a caterpillar of the luna moth, Actiasluna (L.), in eastern Texas. The species is diagnosed with respect to other species of Cotesia recorded from North American Saturniidae, and details of its biology are provided.
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Affiliation(s)
- James B Whitfield
- Department of Entomology, 320 Morrill Hall, University of Illinois, Urbana, IL 61801 USA
| | - Robert J Nuelle
- Research Associate, Entomology, Sam Houston State Natural History Collections Huntsville, TX 77340 USA
| | - Robert J Nuelle
- Research Associate, Entomology, Sam Houston State Natural History Collections Huntsville, TX 77340 USA
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Whitfield JB, Nuelle Jr. RJ, Nuelle III RJ. A new species of Cotesia Cameron (Hymenoptera, Braconidae, Microgastrinae) reared from the hickory horned devil, Citheronia regalis, and luna moth, Actias luna, in east Texas. Zookeys 2018. [DOI: 10.3897/zookeys.740.24226] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
The braconid wasp parasitoidCotesianuellorumWhitfield, new species, is described from specimens reared from a caterpillar of the hickory horned devil,Citheroniaregalis(F.), and from a caterpillar of the luna moth,Actiasluna(L.), in eastern Texas. The species is diagnosed with respect to other species ofCotesiarecorded from North American Saturniidae, and details of its biology are provided.
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Fleming AJ, Wood DM, Smith MA, Hallwachs W, Janzen DH. Revision of the Mesoamerican species of Calolydella Townsend (Diptera: Tachinidae) and description of twenty-three new species reared from caterpillars in Area de Conservación Guanacaste, northwestern Costa Rica. Biodivers Data J 2018:e11223. [PMID: 29674932 PMCID: PMC5904339 DOI: 10.3897/bdj.6.e11223] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/16/2016] [Accepted: 01/25/2018] [Indexed: 11/16/2022] Open
Abstract
Background Twenty-three new species of the genus Calolydella Townsend, 1927 (Diptera: Tachinidae) are described, all reared from multiple species of wild-caught caterpillars across a wide variety of families (Lepidoptera: Crambidae; Erebidae; Geometridae; Hesperiidae; Lycaenidae; Nymphalidae; Pieridae; Riodinidae; and Sphingidae). All caterpillars were collected within Area de Conservación Guanacaste (ACG), in northwestern Costa Rica. This study provides a concise description of each new species using morphology, life history, molecular data, and photographic documentation. In addition to the new species, we also provide a generic redescription and revised key to species of the genus Calolydella from Central and South America. New information The following 23 new species of Calolydella are described by Fleming and Wood: C.adelinamoralesaesp. n., C.alexanderjamesisp. n., C.argenteasp. n., C.aureofaciessp. n., C.bicolorsp. n., C.bifissussp. n., C.crocatasp. n., C.destitutasp. n., C.discalissp. n., C.erasmocoronadoisp. n., C.felipechavarriaisp. n., C.fredriksjobergisp. n., C.inflatipalpissp. n., C.interruptasp. n., C.nigripalpissp. n., C.omissasp. n., C.ordinalissp. n., C.renemalaiseisp. n., C.susanaroibasaesp. n., C.tanyadapkeyaesp. n., C.tenebrosasp. n., C.timjamesisp. n., C.virginiajamesaesp. n.Lydellafrugale Curran, 1934 is proposed as a new synonym of Pygophoriniaperuviana Townsend, 1927, syn. n., under the combination Calolydellafrugale (Curran, 1934), comb. n.
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Affiliation(s)
- A J Fleming
- Agriculture Agri-Food Canada, Rm. 3099I, 960 Carling Avenue, Ottawa, Ontario, Canada
| | - D Monty Wood
- Agriculture Agri-Food Canada, Rm. 3099I, 960 Carling Avenue, Ottawa, Ontario, Canada
| | - M Alex Smith
- Department of Integrative Biology, Guelph University, Guelph, Ontario, Canada
| | - Winnie Hallwachs
- Department of Biology, University of Pennsylvania, Philadelphia, Pennsylvania 19104, United States of America
| | - Daniel H Janzen
- Department of Biology, University of Pennsylvania, Philadelphia, Pennsylvania 19104, United States of America
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Whitfield JB, Austin AD, Fernandez-Triana JL. Systematics, Biology, and Evolution of Microgastrine Parasitoid Wasps. ANNUAL REVIEW OF ENTOMOLOGY 2018; 63:389-406. [PMID: 29058979 DOI: 10.1146/annurev-ento-020117-043405] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
Abstract
The braconid parasitoid wasp subfamily Microgastrinae is perhaps the most species-rich subfamily of animals on Earth. Despite their small size, they are familiar to agriculturalists and field ecologists alike as one of the principal groups of natural enemies of caterpillars feeding on plants. Their abundance and nearly ubiquitous terrestrial distribution, their intricate interactions with host insects, and their historical association with mutualistic polydnaviruses have all contributed to Microgastrinae becoming a key group of organisms for studying parasitism, parasitoid genomics, and mating biology. However, these rich sources of data have not yet led to a robust genus-level classification of the group, and some taxonomic confusion persists as a result. We present the current status of understanding of the general biology, taxonomic history, diversity, geographical patterns, host relationships, and phylogeny of Microgastrinae as a stimulus and foundation for further study. Current progress in elucidating the biology and taxonomy of this important group is rapid and promises a revolution in the classification of these wasps in the near future.
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Affiliation(s)
- James B Whitfield
- Department of Entomology, University of Illinois, Urbana, Illinois 61801, USA;
| | - Andrew D Austin
- Australian Centre for Evolutionary Biology and Biodiversity, School of Biological Sciences, The University of Adelaide, Adelaide, South Australia 5005, Australia;
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Kang I, Chapman EG, Janzen DH, Hallwachs W, Tanya Dapkey, Smith MA, Sharkey MJ. Revision of the species of Lytopylus from Area de Conservación Guanacaste, northwestern Costa Rica (Hymenoptera, Braconidae, Agathidinae). Zookeys 2017; 721:93-158. [PMID: 29308026 PMCID: PMC5740408 DOI: 10.3897/zookeys.721.20287] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/14/2016] [Accepted: 10/19/2017] [Indexed: 11/12/2022] Open
Abstract
Thirty two new species of Lytopylus (Agathidinae) are described with image plates for each species: Lytopylus alejandromasisisp. n., Lytopylus alfredomainierisp. n., Lytopylus anamariamongeaesp. n., Lytopylus angelagonzalezaesp. n., Lytopylus cesarmoraisp. n., Lytopylus eddysanchezisp. n., Lytopylus eliethcantillanoaesp. n., Lytopylus ericchapmanisp. n., Lytopylus gahyunaesp. n., Lytopylus gisukaesp. n., Lytopylus guillermopereiraisp. n., Lytopylus gustavoinduniisp. n., Lytopylus hartmanguidoisp. n., Lytopylus hernanbravoisp. n., Lytopylus hokwonisp. n., Lytopylus ivanniasandovalaesp. n., Lytopylus johanvalerioisp. n., Lytopylus josecortesisp. n., Lytopylus luisgaritaisp. n., Lytopylus mariamartachavarriaesp. n., Lytopylus miguelviquezisp. n., Lytopylus motohasegawaisp. n., Lytopylus okchunaesp. n., Lytopylus pablocobbisp. n., Lytopylus robertofernandezisp. n., Lytopylus rogerblancoisp. n., Lytopylus salvadorlopezisp. n., Lytopylus sangyeonisp. n., Lytopylus sarahmeierottoaesp. n., Lytopylus sergiobermudezisp. n., Lytopylus sigifredomarinisp. n., and Lytopylus youngcheaesp. n. A dichotomous key and a link to an electronic, interactive key are included. All specimens were reared from Lepidoptera larvae collected in Area de Conservación Guanacaste (ACG) and all are associated with ecological information including host caterpillar, collection date, eclosion date, caterpillar food plant, and locality. Neighbor-joining and maximum likelihood analyses of the barcode region of the mitochondrial cytochrome c oxidase subunit I gene (COI DNA barcode) were conducted to aid in species delimitation.
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Affiliation(s)
- Ilgoo Kang
- Department of Entomology, University of Kentucky, Lexington, KY 40546-0091, United States of America
| | - Eric G. Chapman
- Department of Entomology, University of Kentucky, Lexington, KY 40546-0091, United States of America
| | - Daniel H. Janzen
- Department of Biology, University of Pennsylvania, Philadelphia, PA 19104-6018, United States of America
| | - Winnie Hallwachs
- Department of Biology, University of Pennsylvania, Philadelphia, PA 19104-6018, United States of America
| | - Tanya Dapkey
- Department of Biology, University of Pennsylvania, Philadelphia, PA 19104-6018, United States of America
| | - M. Alex Smith
- Department of Integrative Biology, University of Guelph and Biodiversity Institute of Ontario, Guelph, Canada
| | - Michael J. Sharkey
- Department of Entomology, University of Kentucky, Lexington, KY 40546-0091, United States of America
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