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For: Haagmans BL, Andeweg AC, Osterhaus ADME. The application of genomics to emerging zoonotic viral diseases. PLoS Pathog 2009;5:e1000557. [PMID: 19855817 PMCID: PMC2734983 DOI: 10.1371/journal.ppat.1000557] [Citation(s) in RCA: 44] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]  Open
Number Cited by Other Article(s)
1
Rapid detection of φX-174 virus based on synchronous fluorescence of tryptophan. Anal Bioanal Chem 2022;415:509-515. [PMID: 36441232 PMCID: PMC9702944 DOI: 10.1007/s00216-022-04436-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/06/2022] [Revised: 11/09/2022] [Accepted: 11/10/2022] [Indexed: 11/29/2022]
2
Potential zoonotic swine enteric viruses: The risk ignored for public health. Virus Res 2022;315:198767. [PMID: 35421434 DOI: 10.1016/j.virusres.2022.198767] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2021] [Revised: 03/30/2022] [Accepted: 04/03/2022] [Indexed: 12/28/2022]
3
Marinov R, Markova N, Krumova S, Yotovska K, Zaharieva MM, Genova-Kalou P. Antiviral properties of chalcones and their synthetic derivatives: a mini review. PHARMACIA 2020. [DOI: 10.3897/pharmacia.67.e53842] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]  Open
4
Artika IM, Wiyatno A, Ma'roef CN. Pathogenic viruses: Molecular detection and characterization. INFECTION GENETICS AND EVOLUTION 2020;81:104215. [PMID: 32006706 PMCID: PMC7106233 DOI: 10.1016/j.meegid.2020.104215] [Citation(s) in RCA: 31] [Impact Index Per Article: 7.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/15/2019] [Revised: 01/23/2020] [Accepted: 01/28/2020] [Indexed: 12/14/2022]
5
Kaszab E, Doszpoly A, Lanave G, Verma A, Bányai K, Malik YS, Marton S. Metagenomics revealing new virus species in farm and pet animals and aquaculture. GENOMICS AND BIOTECHNOLOGICAL ADVANCES IN VETERINARY, POULTRY, AND FISHERIES 2020. [PMCID: PMC7149329 DOI: 10.1016/b978-0-12-816352-8.00002-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 10/31/2022]
6
Domingo E. Long-term virus evolution in nature. VIRUS AS POPULATIONS 2020. [PMCID: PMC7153321 DOI: 10.1016/b978-0-12-816331-3.00007-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
7
Cho M, Son HS. Prediction of cross-species infection propensities of viruses with receptor similarity. INFECTION GENETICS AND EVOLUTION 2019;73:71-80. [PMID: 31026604 PMCID: PMC7106226 DOI: 10.1016/j.meegid.2019.04.016] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/24/2018] [Revised: 02/21/2019] [Accepted: 04/19/2019] [Indexed: 11/16/2022]
8
Shi W, Li J, Zhou H, Gao GF. Pathogen genomic surveillance elucidates the origins, transmission and evolution of emerging viral agents in China. SCIENCE CHINA. LIFE SCIENCES 2017;60:1317-1330. [PMID: 29270793 PMCID: PMC7088571 DOI: 10.1007/s11427-017-9211-0] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Received: 10/20/2017] [Revised: 11/01/2017] [Indexed: 02/06/2023]
9
Mourani PM, Sontag MK. Ventilator-Associated Pneumonia in Critically Ill Children: A New Paradigm. Pediatr Clin North Am 2017;64:1039-1056. [PMID: 28941534 DOI: 10.1016/j.pcl.2017.06.005] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
10
Xiu L, Zhang C, Wu Z, Peng J. Establishment and Application of a Universal Coronavirus Screening Method Using MALDI-TOF Mass Spectrometry. Front Microbiol 2017;8:1510. [PMID: 28848521 PMCID: PMC5552709 DOI: 10.3389/fmicb.2017.01510] [Citation(s) in RCA: 38] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/2017] [Accepted: 07/27/2017] [Indexed: 12/13/2022]  Open
11
Dong X, Meng F, Hu T, Ju S, Li Y, Sun P, Wang Y, Chen W, Zhang F, Su H, Li S, Cui H, Chen J, Xu S, Fang L, Luan H, Zhang Z, Chang S, Li J, Wang L, Zhao P, Shi W, Cui Z. Dynamic Co-evolution and Interaction of Avian Leukosis Virus Genetic Variants and Host Immune Responses. Front Microbiol 2017;8:1168. [PMID: 28694798 PMCID: PMC5483431 DOI: 10.3389/fmicb.2017.01168] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/02/2017] [Accepted: 06/08/2017] [Indexed: 01/02/2023]  Open
12
Sano K, Naoi Y, Kishimoto M, Masuda T, Tanabe H, Ito M, Niira K, Haga K, Asano K, Tsuchiaka S, Omatsu T, Furuya T, Katayama Y, Oba M, Ouchi Y, Yamasato H, Ishida M, Shirai J, Katayama K, Mizutani T, Nagai M. Identification of further diversity among posaviruses. Arch Virol 2016;161:3541-3548. [PMID: 27619795 DOI: 10.1007/s00705-016-3048-8] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/08/2016] [Accepted: 09/01/2016] [Indexed: 02/06/2023]
13
Domingo E. Long-Term Virus Evolution in Nature. VIRUS AS POPULATIONS 2016. [PMCID: PMC7149407 DOI: 10.1016/b978-0-12-800837-9.00007-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
14
Datta S, Budhauliya R, Das B, Chatterjee S, Vanlalhmuaka, Veer V. Next-generation sequencing in clinical virology: Discovery of new viruses. World J Virol 2015;4:265-276. [PMID: 26279987 PMCID: PMC4534817 DOI: 10.5501/wjv.v4.i3.265] [Citation(s) in RCA: 53] [Impact Index Per Article: 5.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 01/24/2015] [Revised: 03/23/2015] [Accepted: 05/08/2015] [Indexed: 02/05/2023]  Open
15
McGruder B, Leibowitz JL. A review of genetic methods and models for analysis of coronavirus-induced severe pneumonitis. J Gen Virol 2014;96:494-506. [PMID: 25252685 PMCID: PMC4811657 DOI: 10.1099/vir.0.069732-0] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]  Open
16
Polar profile of antiviral peptides from AVPpred Database. Cell Biochem Biophys 2014;70:1469-77. [PMID: 24993579 PMCID: PMC7091296 DOI: 10.1007/s12013-014-0084-4] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
17
Bhattacharjee S. Role of genomic and proteomic tools in the study of host-virus interactions and virus evolution. INDIAN JOURNAL OF VIROLOGY : AN OFFICIAL ORGAN OF INDIAN VIROLOGICAL SOCIETY 2013;24:306-11. [PMID: 24426292 PMCID: PMC3832694 DOI: 10.1007/s13337-013-0150-3] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/28/2013] [Accepted: 07/24/2013] [Indexed: 01/05/2023]
18
Cotten M, Lam TT, Watson SJ, Palser AL, Petrova V, Grant P, Pybus OG, Rambaut A, Guan Y, Pillay D, Kellam P, Nastouli E. Full-genome deep sequencing and phylogenetic analysis of novel human betacoronavirus. Emerg Infect Dis 2013;19:736-42B. [PMID: 23693015 PMCID: PMC3647518 DOI: 10.3201/eid1905.130057] [Citation(s) in RCA: 120] [Impact Index Per Article: 10.9] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]  Open
19
Smits SL, Osterhaus AD. Virus discovery: one step beyond. Curr Opin Virol 2013;3:e1-e6. [PMID: 23578938 PMCID: PMC7102788 DOI: 10.1016/j.coviro.2013.03.007] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/12/2013] [Accepted: 03/14/2013] [Indexed: 02/07/2023]
20
van den Ham HJ, de Waal L, Zaaraoui-Boutahar F, Bijl M, van Ijcken WFJ, Osterhaus ADME, de Boer RJ, Andeweg AC. Early divergence of Th1 and Th2 transcriptomes involves a small core response and sets of transiently expressed genes. Eur J Immunol 2013;43:1074-84. [PMID: 23436590 DOI: 10.1002/eji.201242979] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/11/2012] [Revised: 12/03/2012] [Accepted: 01/28/2013] [Indexed: 12/24/2022]
21
Barh D, Dhawan D, Ganguly NK. Pharmacogenomics of Viral Diseases. OMICS FOR PERSONALIZED MEDICINE 2013. [PMCID: PMC7120516 DOI: 10.1007/978-81-322-1184-6_28] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Indexed: 01/11/2023]
22
Kahn RE, Morozov I, Feldmann H, Richt JA. 6th International Conference on Emerging Zoonoses. Zoonoses Public Health 2012;59 Suppl 2:2-31. [PMID: 22958247 PMCID: PMC7165835 DOI: 10.1111/j.1863-2378.2012.01539.x] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
23
Domingo E, Sheldon J, Perales C. Viral quasispecies evolution. Microbiol Mol Biol Rev 2012;76:159-216. [PMID: 22688811 PMCID: PMC3372249 DOI: 10.1128/mmbr.05023-11] [Citation(s) in RCA: 682] [Impact Index Per Article: 56.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]  Open
24
Animal virus discovery: improving animal health, understanding zoonoses, and opportunities for vaccine development. Curr Opin Virol 2012;2:344-52. [PMID: 22463981 PMCID: PMC3378828 DOI: 10.1016/j.coviro.2012.02.012] [Citation(s) in RCA: 50] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2012] [Revised: 02/09/2012] [Accepted: 02/15/2012] [Indexed: 01/26/2023]
25
Yozwiak NL, Skewes-Cox P, Stenglein MD, Balmaseda A, Harris E, DeRisi JL. Virus identification in unknown tropical febrile illness cases using deep sequencing. PLoS Negl Trop Dis 2012;6:e1485. [PMID: 22347512 PMCID: PMC3274504 DOI: 10.1371/journal.pntd.0001485] [Citation(s) in RCA: 138] [Impact Index Per Article: 11.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/09/2011] [Accepted: 12/07/2011] [Indexed: 02/06/2023]  Open
26
Rowell JL, Dowling NF, Yu W, Yesupriya A, Zhang L, Gwinn M. Trends in population-based studies of human genetics in infectious diseases. PLoS One 2012;7:e25431. [PMID: 22347358 PMCID: PMC3274513 DOI: 10.1371/journal.pone.0025431] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/25/2011] [Accepted: 09/05/2011] [Indexed: 11/18/2022]  Open
27
Marusov G, Sweatt A, Pietrosimone K, Benson D, Geary SJ, Silbart LK, Challa S, Lagoy J, Lawrence DA, Lynes MA. A microarray biosensor for multiplexed detection of microbes using grating-coupled surface plasmon resonance imaging. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2012;46:348-59. [PMID: 22029256 PMCID: PMC3312245 DOI: 10.1021/es201239f] [Citation(s) in RCA: 31] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/19/2023]
28
Nelson KE, Jones-Nelson B. Pathogen Genomics and the Potential for Understanding Diseases in the Developing World. ADVANCES IN MICROBIAL ECOLOGY 2012. [PMCID: PMC7120252 DOI: 10.1007/978-1-4614-2182-5_5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
29
Gifford RJ. Viral evolution in deep time: lentiviruses and mammals. Trends Genet 2011;28:89-100. [PMID: 22197521 DOI: 10.1016/j.tig.2011.11.003] [Citation(s) in RCA: 76] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/30/2011] [Revised: 11/08/2011] [Accepted: 11/09/2011] [Indexed: 11/29/2022]
30
Metagenomic analysis of the viral flora of pine marten and European badger feces. J Virol 2011;86:2360-5. [PMID: 22171250 DOI: 10.1128/jvi.06373-11] [Citation(s) in RCA: 94] [Impact Index Per Article: 7.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
31
Lei F, Shi W. Prospective of Genomics in Revealing Transmission, Reassortment and Evolution of Wildlife-Borne Avian Influenza A (H5N1) Viruses. Curr Genomics 2011;12:466-74. [PMID: 22547954 PMCID: PMC3219842 DOI: 10.2174/138920211797904052] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2011] [Revised: 07/27/2011] [Accepted: 08/10/2011] [Indexed: 12/24/2022]  Open
32
Shan T, Li L, Simmonds P, Wang C, Moeser A, Delwart E. The fecal virome of pigs on a high-density farm. J Virol 2011;85:11697-708. [PMID: 21900163 PMCID: PMC3209269 DOI: 10.1128/jvi.05217-11] [Citation(s) in RCA: 260] [Impact Index Per Article: 20.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/25/2011] [Accepted: 08/23/2011] [Indexed: 12/14/2022]  Open
33
Eiros Bouza JM, Oteo Revuelta JA. [Zoonotic infectious diseases]. Enferm Infecc Microbiol Clin 2011;29 Suppl 3:51-4. [PMID: 21458712 PMCID: PMC7130333 DOI: 10.1016/s0213-005x(11)70028-3] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
34
Distinct severe acute respiratory syndrome coronavirus-induced acute lung injury pathways in two different nonhuman primate species. J Virol 2011;85:4234-45. [PMID: 21325418 DOI: 10.1128/jvi.02395-10] [Citation(s) in RCA: 59] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]  Open
35
Domingo E. Mechanisms of viral emergence. Vet Res 2010;41:38. [PMID: 20167200 PMCID: PMC2831534 DOI: 10.1051/vetres/2010010] [Citation(s) in RCA: 104] [Impact Index Per Article: 7.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/17/2009] [Accepted: 02/04/2010] [Indexed: 01/03/2023]  Open
36
Delcroix M, Riley LW. Cell-Penetrating Peptides for Antiviral Drug Development. Pharmaceuticals (Basel) 2010;3:448-470. [PMID: 27713263 PMCID: PMC4033964 DOI: 10.3390/ph3030448] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/24/2009] [Revised: 02/06/2010] [Accepted: 03/01/2010] [Indexed: 11/18/2022]  Open
37
Eisen JA, MacCallum CJ. Genomics of emerging infectious disease: A PLoS collection. PLoS Biol 2009;7:e1000224. [PMID: 19855830 PMCID: PMC2757914 DOI: 10.1371/journal.pbio.1000224] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]  Open
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