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Wang C, Luo J, He W, Huang A, Lu W, Lin Y, Ou Y. Genome-wide identification and expression analysis of GDP-D-mannose pyrophosphorylase and KATANIN in Corymbia citriodora. FRONTIERS IN PLANT SCIENCE 2023; 14:1308354. [PMID: 38186597 PMCID: PMC10766700 DOI: 10.3389/fpls.2023.1308354] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/06/2023] [Accepted: 12/05/2023] [Indexed: 01/09/2024]
Abstract
The GDP-D-mannose pyrophosphorylase (GMP) and microtubule severing enzyme KATANIN (KTN) are crucial for wood formation. Although functional identification has been performed in Arabidopsis, few comprehensive studies have been conducted in forest trees. In this study, we discovered 8 CcGMP and 4 CcKTN genes by analyzing the whole genome sequence of Corymbia citriodora. The chromosomal location, genome synteny, phylogenetic relationship, protein domain, motif identification, gene structure, cis-acting regulatory elements, and protein-interaction of CcGMP and CcKTN were all investigated. KTN has just one pair of segmentally duplicated genes, while GMP has no duplication events. According to gene structure, two 5' UTRs were identified in CcGMP4. Furthermore, there is no protein-interaction between KTN and GMP. Based on real-time PCR, the expression of most genes showed a positive connection with DBH diameters. In addition, the expression of CcGMP4 and CcKTN4 genes were greater in different size tree, indicating that these genes are important in secondary xylem production. Overall, this findings will enhance our comprehension of the intricacy of CcGMP&CcKTN across diverse DBHs and furnish valuable insights for future functional characterization of specific genes in C. citriodora.
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Affiliation(s)
- Chubiao Wang
- College of Coastal Agricultural Sciences, Guangdong Ocean University, Zhanjiang, China
| | - Jianzhong Luo
- Research Institute of Fast-Growing Trees, Chinese Academy of Forestry, Zhanjiang, China
| | - Wenliang He
- Research Institute of Fast-Growing Trees, Chinese Academy of Forestry, Zhanjiang, China
| | - Anying Huang
- Research Institute of Fast-Growing Trees, Chinese Academy of Forestry, Zhanjiang, China
| | - Wanhong Lu
- Research Institute of Fast-Growing Trees, Chinese Academy of Forestry, Zhanjiang, China
| | - Yan Lin
- Research Institute of Fast-Growing Trees, Chinese Academy of Forestry, Zhanjiang, China
| | - Yuduan Ou
- College of Coastal Agricultural Sciences, Guangdong Ocean University, Zhanjiang, China
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2
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Murshed M, Wei D, Gu Y, Wang J. Simulation of microtubule-cytoplasm interaction revealed the importance of fluid dynamics in determining the organization of microtubules. PLANT DIRECT 2023; 7:e505. [PMID: 37502315 PMCID: PMC10368657 DOI: 10.1002/pld3.505] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/30/2022] [Revised: 03/24/2023] [Accepted: 05/30/2023] [Indexed: 07/29/2023]
Abstract
Although microtubules in plant cells have been extensively studied, the mechanisms that regulate the spatial organization of microtubules are poorly understood. We hypothesize that the interaction between microtubules and cytoplasmic flow plays an important role in the assembly and orientation of microtubules. To test this hypothesis, we developed a new computational modeling framework for microtubules based on theory and methods from the fluid-structure interaction. We employed the immersed boundary method to track the movement of microtubules in cytoplasmic flow. We also incorporated details of the encounter dynamics when two microtubules collide with each other. We verified our computational model through several numerical tests before applying it to the simulation of the microtubule-cytoplasm interaction in a growing plant cell. Our computational investigation demonstrated that microtubules are primarily oriented in the direction orthogonal to the axis of cell elongation. We validated the simulation results through a comparison with the measurement from laboratory experiments. We found that our computational model, with further calibration, was capable of generating microtubule orientation patterns that were qualitatively and quantitatively consistent with the experimental results. The computational model proposed in this study can be naturally extended to many other cellular systems that involve the interaction between microstructures and the intracellular fluid.
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Affiliation(s)
- Mohammad Murshed
- Department of MathematicsUniversity of Tennessee at ChattanoogaChattanoogaTennesseeUSA
| | - Donghui Wei
- Department of Biochemistry and Molecular BiologyPennsylvania State UniversityState CollegePennsylvaniaUSA
| | - Ying Gu
- Department of Biochemistry and Molecular BiologyPennsylvania State UniversityState CollegePennsylvaniaUSA
| | - Jin Wang
- Department of MathematicsUniversity of Tennessee at ChattanoogaChattanoogaTennesseeUSA
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Yang T, He Y, Niu S, Zhang Y. A YABBY gene CRABS CLAW a (CRCa) negatively regulates flower and fruit sizes in tomato. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2022; 320:111285. [PMID: 35643610 DOI: 10.1016/j.plantsci.2022.111285] [Citation(s) in RCA: 11] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/15/2021] [Revised: 03/28/2022] [Accepted: 04/10/2022] [Indexed: 06/15/2023]
Abstract
CRABS CLAW (CRC) is a YABBY transcription factor that plays a pivotal role in carpel development and flower meristem determinacy. Here, we characterized a CRC homolog SlCRCa and elucidated its specific roles in tomato (Solanum lycopersicum). SlCRCa is highly expressed in the petals and stamens, and is responsive to gibberellin (GA) treatment. Overexpression of SlCRCa in tomato reduces the sizes of petals, stamens, and fruits, while the inverse phenotypes are induced by knockdown of SlCRCa. Furthermore, histological investigation suggests that the smaller or larger fruits in SlCRCa-overexpressing or SlCRCa-RNAi plants are mainly determined by the decreases or increases in cell layers and cell sizes in pericarp, respectively. Through transcriptome and qRT-PCR analyses, we speculate that SlCRCa inhibits cell division by regulating the transcription of cell division-related genes, and also suppresses cell expansion by modulating the expansin genes and GA pathway in tomato fruits. Besides, SlCRCa is involved in the feedback regulation of GA biosynthesis. Our findings reveal that SlCRCa negatively regulates fruit size by affecting cell division and cell expansion, and it is also an inhibitor of floral organ sizes in tomato.
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Affiliation(s)
- Tongwen Yang
- College of Horticulture, Northwest A&F University, Yangling 712100, Shaanxi, PR China; Shaanxi Engineering Research Center for Vegetables, Northwest A&F University, Yangling 712100, Shaanxi, PR China.
| | - Yu He
- College of Horticulture, Northwest A&F University, Yangling 712100, Shaanxi, PR China; Shaanxi Engineering Research Center for Vegetables, Northwest A&F University, Yangling 712100, Shaanxi, PR China.
| | - Shaobo Niu
- College of Horticulture, Northwest A&F University, Yangling 712100, Shaanxi, PR China; Shaanxi Engineering Research Center for Vegetables, Northwest A&F University, Yangling 712100, Shaanxi, PR China.
| | - Yan Zhang
- College of Horticulture, Northwest A&F University, Yangling 712100, Shaanxi, PR China; Shaanxi Engineering Research Center for Vegetables, Northwest A&F University, Yangling 712100, Shaanxi, PR China.
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Parrotta L, Faleri C, Del Casino C, Mareri L, Aloisi I, Guerriero G, Hausman JF, Del Duca S, Cai G. Biochemical and cytological interactions between callose synthase and microtubules in the tobacco pollen tube. PLANT CELL REPORTS 2022; 41:1301-1318. [PMID: 35303156 PMCID: PMC9110548 DOI: 10.1007/s00299-022-02860-3] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/15/2021] [Accepted: 03/02/2022] [Indexed: 06/09/2023]
Abstract
KEY MESSAGE The article concerns the association between callose synthase and cytoskeleton by biochemical and ultrastructural analyses in the pollen tube. Results confirmed this association and immunogold labeling showed a colocalization. Callose is a cell wall polysaccharide involved in fundamental biological processes, from plant development to the response to abiotic and biotic stress. To gain insight into the deposition pattern of callose, it is important to know how the enzyme callose synthase is regulated through the interaction with the vesicle-cytoskeletal system. Actin filaments likely determine the long-range distribution of callose synthase through transport vesicles but the spatial/biochemical relationships between callose synthase and microtubules are poorly understood, although experimental evidence supports the association between callose synthase and tubulin. In this manuscript, we further investigated the association between callose synthase and microtubules through biochemical and ultrastructural analyses in the pollen tube model system, where callose is an essential component of the cell wall. Results by native 2-D electrophoresis, isolation of callose synthase complex and far-western blot confirmed that callose synthase is associated with tubulin and can therefore interface with cortical microtubules. In contrast, actin and sucrose synthase were not permanently associated with callose synthase. Immunogold labeling showed colocalization between the enzyme and microtubules, occasionally mediated by vesicles. Overall, the data indicate that pollen tube callose synthase exerts its activity in cooperation with the microtubular cytoskeleton.
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Affiliation(s)
- Luigi Parrotta
- Department of Biological, Geological and Environmental Sciences, University of Bologna, Via Irnerio 42, 40126, Bologna, Italy.
- Interdepartmental Centre for Agri-Food Industrial Research, University of Bologna, Via Quinto Bucci 336, 47521, Cesena, Italy.
| | - Claudia Faleri
- Department of Life Sciences, University of Siena, Via P.A. Mattioli 4, 53100, Siena, Italy
| | - Cecilia Del Casino
- Department of Life Sciences, University of Siena, Via P.A. Mattioli 4, 53100, Siena, Italy
| | - Lavinia Mareri
- Department of Life Sciences, University of Siena, Via P.A. Mattioli 4, 53100, Siena, Italy
| | - Iris Aloisi
- Department of Biological, Geological and Environmental Sciences, University of Bologna, Via Irnerio 42, 40126, Bologna, Italy
| | - Gea Guerriero
- Research and Innovation Department, Luxembourg Institute of Science and Technology, 5 Avenue des Hauts-Fourneaux, 4362, Esch/Alzette, Luxembourg
| | - Jean-Francois Hausman
- Research and Innovation Department, Luxembourg Institute of Science and Technology, 5 Avenue des Hauts-Fourneaux, 4362, Esch/Alzette, Luxembourg
| | - Stefano Del Duca
- Department of Biological, Geological and Environmental Sciences, University of Bologna, Via Irnerio 42, 40126, Bologna, Italy
- Interdepartmental Centre for Agri-Food Industrial Research, University of Bologna, Via Quinto Bucci 336, 47521, Cesena, Italy
| | - Giampiero Cai
- Department of Life Sciences, University of Siena, Via P.A. Mattioli 4, 53100, Siena, Italy
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Chukhchin DG, Vashukova K, Novozhilov E. Bordered Pit Formation in Cell Walls of Spruce Tracheids. PLANTS 2021; 10:plants10091968. [PMID: 34579500 PMCID: PMC8469699 DOI: 10.3390/plants10091968] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/02/2021] [Revised: 09/17/2021] [Accepted: 09/18/2021] [Indexed: 12/02/2022]
Abstract
The process of pit formation in plants still has various questions unaddressed and unknown, which opens up many interesting and new research opportunities. The aim of this work was elucidation of the mechanism for the formation of bordered pits of the spruce (Picea abies (L.) Karst.) tracheid with exosomes participation and mechanical deformation of the cell wall. Sample sections were prepared from spruce stem samples after cryomechanical destruction with liquid nitrogen. The study methods included scanning electron microscopy and enzymatic treatment. Enzymatic treatment of the elements of the bordered pit made it possible to clarify the localization of cellulose and pectin. SEM images of intermediate stages of bordered pit formation in the radial and tangential directions were obtained. An asynchronous mechanism of formation of bordered-pit pairs in tracheids is proposed. The formation of the pit pair begins from the side of the initiator cell and is associated with enzymatic hydrolysis of the secondary cell wall and subsequent mechanical deformation of the primary cell walls. Enzymatic hydrolysis of the S1 layer of the secondary cell wall is carried out by exosome-delivered endoglucanases.
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Yang Y, Chen B, Dang X, Zhu L, Rao J, Ren H, Lin C, Qin Y, Lin D. Arabidopsis IPGA1 is a microtubule-associated protein essential for cell expansion during petal morphogenesis. JOURNAL OF EXPERIMENTAL BOTANY 2019; 70:5231-5243. [PMID: 31198941 PMCID: PMC6793458 DOI: 10.1093/jxb/erz284] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/08/2019] [Accepted: 06/05/2019] [Indexed: 05/23/2023]
Abstract
Unlike animal cells, plant cells do not possess centrosomes that serve as microtubule organizing centers; how microtubule arrays are organized throughout plant morphogenesis remains poorly understood. We report here that Arabidopsis INCREASED PETAL GROWTH ANISOTROPY 1 (IPGA1), a previously uncharacterized microtubule-associated protein, regulates petal growth and shape by affecting cortical microtubule organization. Through a genetic screen, we showed that IPGA1 loss-of-function mutants displayed a phenotype of longer and narrower petals, as well as increased anisotropic cell expansion of the petal epidermis in the late phases of flower development. Map-based cloning studies revealed that IPGA1 encodes a previously uncharacterized protein that colocalizes with and directly binds to microtubules. IPGA1 plays a negative role in the organization of cortical microtubules into parallel arrays oriented perpendicular to the axis of cell elongation, with the ipga1-1 mutant displaying increased microtubule ordering in petal abaxial epidermal cells. The IPGA1 family is conserved among land plants and its homologs may have evolved to regulate microtubule organization. Taken together, our findings identify IPGA1 as a novel microtubule-associated protein and provide significant insights into IPGA1-mediated microtubule organization and petal growth anisotropy.
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Affiliation(s)
- Yanqiu Yang
- College of Life Science, Basic Forestry and Proteomics Research Center, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Binqinq Chen
- College of Life Science, Basic Forestry and Proteomics Research Center, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Xie Dang
- College of Life Science, Basic Forestry and Proteomics Research Center, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Fujian Agriculture and Forestry University, Fuzhou, China
- State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, Guangxi Key Lab of Sugarcane Biology, College of Agriculture, Guangxi University, Nanning, China
| | - Lilan Zhu
- College of Life Science, Basic Forestry and Proteomics Research Center, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Jinqiu Rao
- College of Life Science, Basic Forestry and Proteomics Research Center, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Huibo Ren
- College of Life Science, Basic Forestry and Proteomics Research Center, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Chentao Lin
- Department of Molecular, Cell, and Developmental Biology, University of California, Los Angeles, Los Angeles, CA, USA
| | - Yuan Qin
- State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, Guangxi Key Lab of Sugarcane Biology, College of Agriculture, Guangxi University, Nanning, China
- State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Center for Genomics and Biotechnology, College of Plant Protection, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Deshu Lin
- College of Life Science, Basic Forestry and Proteomics Research Center, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Fujian Agriculture and Forestry University, Fuzhou, China
- State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, Guangxi Key Lab of Sugarcane Biology, College of Agriculture, Guangxi University, Nanning, China
- Correspondence:
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Parrotta L, Faleri C, Guerriero G, Cai G. Cold stress affects cell wall deposition and growth pattern in tobacco pollen tubes. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2019; 283:329-342. [PMID: 31128704 DOI: 10.1016/j.plantsci.2019.03.010] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/16/2018] [Revised: 01/29/2019] [Accepted: 03/15/2019] [Indexed: 05/08/2023]
Abstract
Cold is an abiotic stress seriously threatening crop productivity by decreasing biomass production. The pollen tube is a target of cold stress, but also a useful model to address questions on cell wall biosynthesis. We here provide (immuno)cytological data relative to the impact of cold on the pollen tube cell wall. We clearly show that the growth pattern is severely affected by the stress, since the typical pulsed-growth mechanism accompanied by the periodic deposition of pectin rings is absent/severely reduced. Additionally, pectins and cellulose accumulate in bulges provoked by the stress, while callose, which colocalizes with pectins in the periodic rings formed during pulsed growth, accumulates randomly in the stressed samples. The altered distribution of the cell wall components is accompanied by differences in the localization of glucan synthases: cellulose synthase shows a more diffuse localization, while callose synthase shows a more frequent cytoplasmic accumulation, thereby denoting a failure in plasma membrane insertion. The cell wall observations are complemented by the analysis of intracellular Ca2+, pH and reactive oxygen species (ROS): while in the case of pH no major differences are observed, a less focused Ca2+ and ROS gradients are present in the stressed samples. The standard oscillatory growth of pollen tubes is recovered by transient changes of turgor pressure induced by hypoosmotic media. Overall our data contribute to the understanding of the impact that cold stress has on the normal development of the pollen tube and unveil the cell wall-related aberrant features accompanying the observed alterations.
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Affiliation(s)
- Luigi Parrotta
- Università di Bologna, Dipartimento di Scienze Biologiche, Geologiche e Ambientali, Via Irnerio 42, Bologna, Italy
| | - Claudia Faleri
- Università di Siena, Dipartimento di Scienze della Vita, via P.A. Mattioli 4, Siena, Italy
| | - Gea Guerriero
- Research and Innovation Department, Luxembourg Institute of Science and Technology, 5 avenue des Hauts-Fourneaux, L-4362, Esch/Alzette, Luxembourg
| | - Giampiero Cai
- Università di Siena, Dipartimento di Scienze della Vita, via P.A. Mattioli 4, Siena, Italy.
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Long Y, Boudaoud A. Emergence of robust patterns from local rules during plant development. CURRENT OPINION IN PLANT BIOLOGY 2019; 47:127-137. [PMID: 30577002 DOI: 10.1016/j.pbi.2018.11.002] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/14/2018] [Revised: 11/28/2018] [Accepted: 11/28/2018] [Indexed: 06/09/2023]
Abstract
The formation of spatial and temporal patterns is an essential component of organismal development. Patterns can be observed on every level from subcellular to organismal and may emerge from local rules that correspond to the interactions between molecules, cells, or tissues. The emergence of robust patterns may seem in contradiction with the prominent heterogeneity at subcellular and cellular scales, however it has become increasingly clear that heterogeneity can be instrumental for pattern formation. Here we review recent examples in plant development, involving genetic regulation, cell arrangement, growth and signal gradient. We discuss how patterns emerge from local rules, whether heterogeneity is stochastic or can be patterned, and whether stochastic noise is amplified or requires filtering for robust patterns to be achieved. We also stress the importance of modelling in investigating such questions.
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Affiliation(s)
- Yuchen Long
- Laboratoire Reproduction et Développement des Plantes, Université de Lyon, ENS de Lyon, UCB Lyon 1, CNRS, INRA, F-69342, Lyon, France
| | - Arezki Boudaoud
- Laboratoire Reproduction et Développement des Plantes, Université de Lyon, ENS de Lyon, UCB Lyon 1, CNRS, INRA, F-69342, Lyon, France.
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9
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Le PY, Jeon HW, Kim MH, Park EJ, Lee H, Hwang I, Han KH, Ko JH. Gain-of-function mutation of AtDICE1, encoding a putative endoplasmic reticulum-localized membrane protein, causes defects in anisotropic cell elongation by disturbing cell wall integrity in Arabidopsis. ANNALS OF BOTANY 2018; 122:151-164. [PMID: 29659701 PMCID: PMC6025203 DOI: 10.1093/aob/mcy049] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/14/2017] [Accepted: 03/15/2018] [Indexed: 05/30/2023]
Abstract
Background and Aims Anisotropic cell elongation depends on cell wall relaxation and cellulose microfibril arrangement. The aim of this study was to characterize the molecular function of AtDICE1 encoding a novel transmembrane protein involved in anisotropic cell elongation in Arabidopsis. Methods Phenotypic characterizations of transgenic Arabidopsis plants mis-regulating AtDICE1 expression with different pharmacological treatments were made, and biochemical, cell biological and transcriptome analyses were performed. Key Results Upregulation of AtDICE1 in Arabidopsis (35S::AtDICE1) resulted in severe dwarfism, probably caused by defects in anisotropic cell elongation. Epidermal cell swelling was evident in all tissues, and abnormal secondary wall thickenings were observed in pith cells of stems. These phenotypes were reproduced not only by inducible expression of AtDICE1 but also by overexpression of its poplar homologue in Arabidopsis. RNA interference suppression lines of AtDICE1 resulted in no observable phenotypic changes. Interestingly, wild-type plants treated with isoxaben, a cellulose biosynthesis inhibitor, phenocopied the 35S::AtDICE1 plants, suggesting that cellulose biosynthesis was compromised in the 35S::AtDICE1 plants. Indeed, disturbed cortical microtubule arrangements in 35S::AtDICE1/GFP-TuA6 plants were observed, and the cellulose content was significantly reduced in 35S::AtDICE1 plants. A promoter::GUS analysis showed that AtDICE1 is mainly expressed in vascular tissue, and transient expression of GFP:AtDICE1 in tobacco suggests that AtDICE1 is probably localized in the endoplasmic reticulum (ER). In addition, the external N-terminal conserved domain of AtDICE1 was found to be necessary for AtDICE1 function. Whole transcriptome analyses of 35S::AtDICE1 revealed that many genes involved in cell wall modification and stress/defence responses were mis-regulated. Conclusions AtDICE1, a novel ER-localized transmembrane protein, may contribute to anisotropic cell elongation in the formation of vascular tissue by affecting cellulose biosynthesis.
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Affiliation(s)
- Phi-Yen Le
- Department of Plant & Environmental New Resources, Kyung Hee University, Yongin, Republic of Korea
| | - Hyung-Woo Jeon
- Department of Plant & Environmental New Resources, Kyung Hee University, Yongin, Republic of Korea
| | - Min-Ha Kim
- Department of Plant & Environmental New Resources, Kyung Hee University, Yongin, Republic of Korea
| | - Eung-Jun Park
- Division of Forest Biotechnology, Korea Forest Research Institute, Suwon, Republic of Korea
| | - Hyoshin Lee
- Division of Forest Biotechnology, Korea Forest Research Institute, Suwon, Republic of Korea
| | - Indeok Hwang
- Department of Horticulture and Department of Forestry, Michigan State University, East Lansing, MI, USA
| | - Kyung-Hwan Han
- Department of Horticulture and Department of Forestry, Michigan State University, East Lansing, MI, USA
| | - Jae-Heung Ko
- Department of Plant & Environmental New Resources, Kyung Hee University, Yongin, Republic of Korea
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10
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Differential gene expression revealed with RNA-Seq and parallel genotype selection of the ornithine decarboxylase gene in fish inhabiting polluted areas. Sci Rep 2018; 8:4820. [PMID: 29556088 PMCID: PMC5859300 DOI: 10.1038/s41598-018-23182-z] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/03/2017] [Accepted: 03/07/2018] [Indexed: 02/05/2023] Open
Abstract
How organisms adapt to unfavorable environmental conditions by means of plasticity or selection of favorable genetic variants is a central issue in evolutionary biology. In the Maipo River basin, the fish Basilichthys microlepidotus inhabits polluted and non-polluted areas. Previous studies have suggested that directional selection drives genomic divergence between these areas in 4% of Amplified Fragment Length Polymorphism (AFLP) loci, but the underlying genes and functions remain unknown. We hypothesized that B. microlepidotus in this basin has plastic and/or genetic responses to these conditions. Using RNA-Seq, we identified differentially expressed genes in individuals from two polluted sites compared with fish inhabiting non-polluted sites. In one polluted site, the main upregulated genes were related to cellular proliferation as well as suppression and progression of tumors, while biological processes and molecular functions involved in apoptotic processes were overrepresented in the upregulated genes of the second polluted site. The ornithine decarboxylase gene (related to tumor promotion and progression), which was overexpressed in both polluted sites, was sequenced, and a parallel pattern of a heterozygote deficiency and increase of the same homozygote genotype in both polluted sites compared with fish inhabiting the non-polluted sites was detected. These results suggest the occurrence of both a plastic response in gene expression and an interplay between phenotypic change and genotypic selection in the face of anthropogenic pollution.
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11
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Nelson CE, Rogowski A, Morland C, Wilhide JA, Gilbert HJ, Gardner JG. Systems analysis in Cellvibrio japonicus resolves predicted redundancy of β-glucosidases and determines essential physiological functions. Mol Microbiol 2017; 104:294-305. [PMID: 28118504 DOI: 10.1111/mmi.13625] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 01/17/2017] [Indexed: 12/29/2022]
Abstract
Degradation of polysaccharides forms an essential arc in the carbon cycle, provides a percentage of our daily caloric intake, and is a major driver in the renewable chemical industry. Microorganisms proficient at degrading insoluble polysaccharides possess large numbers of carbohydrate active enzymes (CAZymes), many of which have been categorized as functionally redundant. Here we present data that suggests that CAZymes that have overlapping enzymatic activities can have unique, non-overlapping biological functions in the cell. Our comprehensive study to understand cellodextrin utilization in the soil saprophyte Cellvibrio japonicus found that only one of four predicted β-glucosidases is required in a physiological context. Gene deletion analysis indicated that only the cel3B gene product is essential for efficient cellodextrin utilization in C. japonicus and is constitutively expressed at high levels. Interestingly, expression of individual β-glucosidases in Escherichia coli K-12 enabled this non-cellulolytic bacterium to be fully capable of using cellobiose as a sole carbon source. Furthermore, enzyme kinetic studies indicated that the Cel3A enzyme is significantly more active than the Cel3B enzyme on the oligosaccharides but not disaccharides. Our approach for parsing related CAZymes to determine actual physiological roles in the cell can be applied to other polysaccharide-degradation systems.
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Affiliation(s)
- Cassandra E Nelson
- Department of Biological Sciences, University of Maryland - Baltimore County, Baltimore, Maryland, USA
| | - Artur Rogowski
- Institute for Cell and Molecular Biosciences, Newcastle University, Newcastle Upon Tyne, UK
| | - Carl Morland
- Institute for Cell and Molecular Biosciences, Newcastle University, Newcastle Upon Tyne, UK
| | - Joshua A Wilhide
- Molecular Characterization and Analysis Complex, University of Maryland - Baltimore County, Maryland, USA
| | - Harry J Gilbert
- Molecular Characterization and Analysis Complex, University of Maryland - Baltimore County, Maryland, USA
| | - Jeffrey G Gardner
- Department of Biological Sciences, University of Maryland - Baltimore County, Baltimore, Maryland, USA
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12
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Bhaskara GB, Wen TN, Nguyen TT, Verslues PE. Protein Phosphatase 2Cs and Microtubule-Associated Stress Protein 1 Control Microtubule Stability, Plant Growth, and Drought Response. THE PLANT CELL 2017; 29:169-191. [PMID: 28011693 PMCID: PMC5304354 DOI: 10.1105/tpc.16.00847] [Citation(s) in RCA: 66] [Impact Index Per Article: 9.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/10/2016] [Revised: 12/22/2016] [Accepted: 12/22/2016] [Indexed: 05/03/2023]
Abstract
Plant growth is coordinated with environmental factors, including water availability during times of drought. Microtubules influence cell expansion; however, the mechanisms by which environmental signals impinge upon microtubule organization and whether microtubule-related factors limit growth during drought remains unclear. We found that three Clade E Growth-Regulating (EGR) Type 2C protein phosphatases act as negative growth regulators to restrain growth during drought. Quantitative phosphoproteomics indicated that EGRs target cytoskeleton and plasma membrane-associated proteins. Of these, Microtubule-Associated Stress Protein 1 (MASP1), an uncharacterized protein, increased in abundance during stress treatment and could bind, bundle, and stabilize microtubules in vitro. MASP1 overexpression enhanced growth, in vivo microtubule stability, and recovery of microtubule organization during drought acclimation. These MASP1 functions in vivo were dependent on phosphorylation of a single serine. For all EGR and MASP1 mutants and transgenic lines examined, enhanced microtubule recovery and stability were associated with increased growth during drought stress. The EGR-MASP1 system selectively regulates microtubule recovery and stability to adjust plant growth and cell expansion in response to changing environmental conditions. Modification of EGR-MASP1 signaling may be useful to circumvent negative growth regulation limiting plant productivity. EGRs are likely to regulate additional proteins involved in microtubule stability and stress signaling.
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Affiliation(s)
| | - Tuan-Nan Wen
- Institute of Plant and Microbial Biology, Academia Sinica, Taipei 11529, Taiwan
| | - Thao Thi Nguyen
- Institute of Plant and Microbial Biology, Academia Sinica, Taipei 11529, Taiwan
| | - Paul E Verslues
- Institute of Plant and Microbial Biology, Academia Sinica, Taipei 11529, Taiwan
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13
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Rosero A, Oulehlová D, Stillerová L, Schiebertová P, Grunt M, Žárský V, Cvrčková F. Arabidopsis FH1 Formin Affects Cotyledon Pavement Cell Shape by Modulating Cytoskeleton Dynamics. PLANT & CELL PHYSIOLOGY 2016; 57:488-504. [PMID: 26738547 DOI: 10.1093/pcp/pcv209] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/07/2015] [Accepted: 12/24/2015] [Indexed: 05/03/2023]
Abstract
Plant cell morphogenesis involves concerted rearrangements of microtubules and actin microfilaments. We previously reported that FH1, the main Arabidopsis thaliana housekeeping Class I membrane-anchored formin, contributes to actin dynamics and microtubule stability in rhizodermis cells. Here we examine the effects of mutations affecting FH1 (At3g25500) on cell morphogenesis and above-ground organ development in seedlings, as well as on cytoskeletal organization and dynamics, using a combination of confocal and variable angle epifluorescence microscopy with a pharmacological approach. Homozygous fh1 mutants exhibited cotyledon epinasty and had larger cotyledon pavement cells with more pronounced lobes than the wild type. The pavement cell shape alterations were enhanced by expression of the fluorescent microtubule marker GFP-microtubule-associated protein 4 (MAP4). Mutant cotyledon pavement cells exhibited reduced density and increased stability of microfilament bundles, as well as enhanced dynamics of microtubules. Analogous results were also obtained upon treatments with the formin inhibitor SMIFH2 (small molecule inhibitor of formin homology 2 domains). Pavement cell shape in wild-type (wt) and fh1 plants in some situations exhibited a differential response towards anti-cytoskeletal drugs, especially the microtubule disruptor oryzalin. Our observations indicate that FH1 participates in the control of microtubule dynamics, possibly via its effects on actin, subsequently influencing cell morphogenesis and macroscopic organ development.
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Affiliation(s)
- Amparo Rosero
- Department of Experimental Plant Biology, Faculty of Sciences, Charles University, Viničná 5, CZ 128 44 Praha 2, Czech Republic Colombian Institute for Agricultural Research-CORPOICA-Turipana, Km 13 via Monteria, Cereté, Cordoba, Colombia Department of Cell Biology, Faculty of Science, Palacký University Olomouc, Centre of the Region Haná for Biotechnological and Agricultural Research, Šlechtitelů 586/11, CZ 783 71 Olomouc-Holice, Czech Republic
| | - Denisa Oulehlová
- Department of Experimental Plant Biology, Faculty of Sciences, Charles University, Viničná 5, CZ 128 44 Praha 2, Czech Republic Institute of Experimental Botany, Academy of Sciences of the Czech Republic, Rozvojová 135, CZ 160 00 Prague 6, Czech Republic
| | - Lenka Stillerová
- Department of Experimental Plant Biology, Faculty of Sciences, Charles University, Viničná 5, CZ 128 44 Praha 2, Czech Republic
| | - Petra Schiebertová
- Department of Experimental Plant Biology, Faculty of Sciences, Charles University, Viničná 5, CZ 128 44 Praha 2, Czech Republic
| | - Michal Grunt
- Department of Experimental Plant Biology, Faculty of Sciences, Charles University, Viničná 5, CZ 128 44 Praha 2, Czech Republic
| | - Viktor Žárský
- Department of Experimental Plant Biology, Faculty of Sciences, Charles University, Viničná 5, CZ 128 44 Praha 2, Czech Republic Institute of Experimental Botany, Academy of Sciences of the Czech Republic, Rozvojová 135, CZ 160 00 Prague 6, Czech Republic
| | - Fatima Cvrčková
- Department of Experimental Plant Biology, Faculty of Sciences, Charles University, Viničná 5, CZ 128 44 Praha 2, Czech Republic
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14
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Celler K, Fujita M, Kawamura E, Ambrose C, Herburger K, Holzinger A, Wasteneys GO. Microtubules in Plant Cells: Strategies and Methods for Immunofluorescence, Transmission Electron Microscopy, and Live Cell Imaging. Methods Mol Biol 2016; 1365:155-84. [PMID: 26498784 DOI: 10.1007/978-1-4939-3124-8_8] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Abstract
Microtubules (MTs) are required throughout plant development for a wide variety of processes, and different strategies have evolved to visualize and analyze them. This chapter provides specific methods that can be used to analyze microtubule organization and dynamic properties in plant systems and summarizes the advantages and limitations for each technique. We outline basic methods for preparing samples for immunofluorescence labeling, including an enzyme-based permeabilization method, and a freeze-shattering method, which generates microfractures in the cell wall to provide antibodies access to cells in cuticle-laden aerial organs such as leaves. We discuss current options for live cell imaging of MTs with fluorescently tagged proteins (FPs), and provide chemical fixation, high-pressure freezing/freeze substitution, and post-fixation staining protocols for preserving MTs for transmission electron microscopy and tomography.
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Affiliation(s)
- Katherine Celler
- Department of Botany, The University of British Columbia, Vancouver, BC, Canada
| | - Miki Fujita
- Department of Botany, The University of British Columbia, Vancouver, BC, Canada
| | - Eiko Kawamura
- Western College of Veterinary Medicine, University of Saskatchewan, Saskatoon, SK, Canada
| | - Chris Ambrose
- Department of Biology, University of Saskatchewan, Saskatoon, SK, Canada
| | - Klaus Herburger
- Functional Plant Biology, Institute of Botany, University of Innsbruck, Sternwartestraße 15, 6020, Innsbruck, Austria
| | - Andreas Holzinger
- Functional Plant Biology, Institute of Botany, University of Innsbruck, Sternwartestraße 15, 6020, Innsbruck, Austria.
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15
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Li S, Lei L, Yingling YG, Gu Y. Microtubules and cellulose biosynthesis: the emergence of new players. CURRENT OPINION IN PLANT BIOLOGY 2015; 28:76-82. [PMID: 26476686 DOI: 10.1016/j.pbi.2015.09.002] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/29/2015] [Revised: 08/28/2015] [Accepted: 09/03/2015] [Indexed: 06/05/2023]
Abstract
Microtubules determine the orientation of newly formed cellulose microfibrils in expanding cells. There are many hypotheses regarding how the information is transduced across the plasma membrane from microtubules to cellulose microfibrils. However, the molecular mechanisms underlying the co-alignment between microtubules and cellulose microfibrils were not revealed until the recent discovery of cellulose synthase interacting (CSI) proteins. Characterization of CSIs and additional cellulose synthase-associated proteins will greatly advance the knowledge of how cellulose microfibrils are organized.
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Affiliation(s)
- Shundai Li
- Department of Biochemistry and Molecular Biology, Pennsylvania State University, University Park, PA 16802, United States
| | - Lei Lei
- Department of Biochemistry and Molecular Biology, Pennsylvania State University, University Park, PA 16802, United States
| | - Yaroslava G Yingling
- Department of Materials Science and Engineering, North Carolina State University, Raleigh, NC 27695, United States
| | - Ying Gu
- Department of Biochemistry and Molecular Biology, Pennsylvania State University, University Park, PA 16802, United States.
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16
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Fu Y. The cytoskeleton in the pollen tube. CURRENT OPINION IN PLANT BIOLOGY 2015; 28:111-9. [PMID: 26550939 DOI: 10.1016/j.pbi.2015.10.004] [Citation(s) in RCA: 53] [Impact Index Per Article: 5.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/03/2015] [Revised: 10/07/2015] [Accepted: 10/12/2015] [Indexed: 05/10/2023]
Abstract
The cytoskeleton in pollen tubes has been intensively studied, because of its abundance and prominent roles and because the pollen tube is an excellent experimental system for cell biological studies. Pollen actin microfilaments (MFs) exist as multiple distinct populations, each participating in a specific cellular trafficking or organization process. Consequently, MFs are essential for pollen tube growth and are tightly regulated in response to various signals. Pollen microtubules (MTs) are non-essential and less characterized, but recent studies have implicated MTs in vesicle trafficking and cell wall construction in pollen tubes. This review summarizes recent advances in understanding the organization and regulation of both MFs and MTs and discusses their roles in cellular trafficking and the modulation of pollen-tube tip growth.
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Affiliation(s)
- Ying Fu
- State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University, Beijing 100193, China.
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17
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Takatani S, Otani K, Kanazawa M, Takahashi T, Motose H. Structure, function, and evolution of plant NIMA-related kinases: implication for phosphorylation-dependent microtubule regulation. JOURNAL OF PLANT RESEARCH 2015; 128:875-91. [PMID: 26354760 DOI: 10.1007/s10265-015-0751-6] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/26/2015] [Accepted: 08/20/2015] [Indexed: 05/25/2023]
Abstract
Microtubules are highly dynamic structures that control the spatiotemporal pattern of cell growth and division. Microtubule dynamics are regulated by reversible protein phosphorylation involving both protein kinases and phosphatases. Never in mitosis A (NIMA)-related kinases (NEKs) are a family of serine/threonine kinases that regulate microtubule-related mitotic events in fungi and animal cells (e.g. centrosome separation and spindle formation). Although plants contain multiple members of the NEK family, their functions remain elusive. Recent studies revealed that NEK6 of Arabidopsis thaliana regulates cell expansion and morphogenesis through β-tubulin phosphorylation and microtubule destabilization. In addition, plant NEK members participate in organ development and stress responses. The present phylogenetic analysis indicates that plant NEK genes are diverged from a single NEK6-like gene, which may share a common ancestor with other kinases involved in the control of microtubule organization. On the contrary, another mitotic kinase, polo-like kinase, might have been lost during the evolution of land plants. We propose that plant NEK members have acquired novel functions to regulate cell growth, microtubule organization, and stress responses.
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Affiliation(s)
- Shogo Takatani
- Division of Bioscience, Graduate School of Natural Science and Technology, Okayama University, Tsushimanaka 3-1-1, Okayama, 700-8530, Japan
| | - Kento Otani
- Division of Bioscience, Graduate School of Natural Science and Technology, Okayama University, Tsushimanaka 3-1-1, Okayama, 700-8530, Japan
| | - Mai Kanazawa
- Department of Biology, Faculty of Science, Okayama University, Tsushimanaka 3-1-1, Okayama, 700-8530, Japan
| | - Taku Takahashi
- Division of Bioscience, Graduate School of Natural Science and Technology, Okayama University, Tsushimanaka 3-1-1, Okayama, 700-8530, Japan
- Department of Biology, Faculty of Science, Okayama University, Tsushimanaka 3-1-1, Okayama, 700-8530, Japan
| | - Hiroyasu Motose
- Division of Bioscience, Graduate School of Natural Science and Technology, Okayama University, Tsushimanaka 3-1-1, Okayama, 700-8530, Japan.
- Department of Biology, Faculty of Science, Okayama University, Tsushimanaka 3-1-1, Okayama, 700-8530, Japan.
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18
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Liu Z, Persson S, Zhang Y. The connection of cytoskeletal network with plasma membrane and the cell wall. JOURNAL OF INTEGRATIVE PLANT BIOLOGY 2015; 57:330-40. [PMID: 25693826 PMCID: PMC4405036 DOI: 10.1111/jipb.12342] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/14/2014] [Accepted: 02/14/2015] [Indexed: 05/18/2023]
Abstract
The cell wall provides external support of the plant cells, while the cytoskeletons including the microtubules and the actin filaments constitute an internal framework. The cytoskeletons contribute to the cell wall biosynthesis by spatially and temporarily regulating the transportation and deposition of cell wall components. This tight control is achieved by the dynamic behavior of the cytoskeletons, but also through the tethering of these structures to the plasma membrane. This tethering may also extend beyond the plasma membrane and impact on the cell wall, possibly in the form of a feedback loop. In this review, we discuss the linking components between the cytoskeletons and the plasma membrane, and/or the cell wall. We also discuss the prospective roles of these components in cell wall biosynthesis and modifications, and aim to provide a platform for further studies in this field.
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Affiliation(s)
- Zengyu Liu
- Max-Planck Institute for Molecular Plant Physiology14476 Potsdam, Germany
| | - Staffan Persson
- Max-Planck Institute for Molecular Plant Physiology14476 Potsdam, Germany
- ARC Centre of Excellence in Plant Cell Walls, School of Botany, University of MelbourneParkville, 3010, Victoria, Australia
| | - Yi Zhang
- Max-Planck Institute for Molecular Plant Physiology14476 Potsdam, Germany
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19
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Moscatelli A, Gagliardi A, Maneta-Peyret L, Bini L, Stroppa N, Onelli E, Landi C, Scali M, Idilli AI, Moreau P. Characterisation of detergent-insoluble membranes in pollen tubes of Nicotiana tabacum (L.). Biol Open 2015; 4:378-99. [PMID: 25701665 PMCID: PMC4359744 DOI: 10.1242/bio.201410249] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/02/2023] Open
Abstract
Pollen tubes are the vehicle for sperm cell delivery to the embryo sac during fertilisation of Angiosperms. They provide an intriguing model for unravelling mechanisms of growing to extremes. The asymmetric distribution of lipids and proteins in the pollen tube plasma membrane modulates ion fluxes and actin dynamics and is maintained by a delicate equilibrium between exocytosis and endocytosis. The structural constraints regulating polarised secretion and asymmetric protein distribution on the plasma membrane are mostly unknown. To address this problem, we investigated whether ordered membrane microdomains, namely membrane rafts, might contribute to sperm cell delivery. Detergent insoluble membranes, rich in sterols and sphingolipids, were isolated from tobacco pollen tubes. MALDI TOF/MS analysis revealed that actin, prohibitins and proteins involved in methylation reactions and in phosphoinositide pattern regulation are specifically present in pollen tube detergent insoluble membranes. Tubulins, voltage-dependent anion channels and proteins involved in membrane trafficking and signalling were also present. This paper reports the first evidence of membrane rafts in Angiosperm pollen tubes, opening new perspectives on the coordination of signal transduction, cytoskeleton dynamics and polarised secretion.
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Affiliation(s)
- Alessandra Moscatelli
- Dipartimento di Bioscienze, Università degli Studi di Milano, Via Celoria 26, 20133 Milan, Italy
| | - Assunta Gagliardi
- Laboratorio di Proteomica Funzionale, Dipartimento di Scienze della Vita, Università degli Studi di Siena, Via Aldo Moro 2, 53100 Siena, Italy
| | - Lilly Maneta-Peyret
- Laboratoire de Biogenèse Membranaire, Université Bordeaux Segalen, 71 Avenue Edouard Bourlaux, 33883 Villenave d'Ornon, France
| | - Luca Bini
- Laboratorio di Proteomica Funzionale, Dipartimento di Scienze della Vita, Università degli Studi di Siena, Via Aldo Moro 2, 53100 Siena, Italy
| | - Nadia Stroppa
- Dipartimento di Bioscienze, Università degli Studi di Milano, Via Celoria 26, 20133 Milan, Italy
| | - Elisabetta Onelli
- Dipartimento di Bioscienze, Università degli Studi di Milano, Via Celoria 26, 20133 Milan, Italy
| | - Claudia Landi
- Laboratorio di Proteomica Funzionale, Dipartimento di Scienze della Vita, Università degli Studi di Siena, Via Aldo Moro 2, 53100 Siena, Italy
| | - Monica Scali
- Dipartimento di Scienze della Vita, Università degli Studi di Siena, Via P. A. Mattioli 4, 53100 Siena, Italy
| | - Aurora Irene Idilli
- Dipartimento di Bioscienze, Università degli Studi di Milano, Via Celoria 26, 20133 Milan, Italy Present address: Institute of Biophysics, National Research Council and FBK, 38123 Trento, Italy
| | - Patrick Moreau
- Laboratoire de Biogenèse Membranaire, Université Bordeaux Segalen, 71 Avenue Edouard Bourlaux, 33883 Villenave d'Ornon, France
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20
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Worden N, Wilkop TE, Esteve VE, Jeannotte R, Lathe R, Vernhettes S, Weimer B, Hicks G, Alonso J, Labavitch J, Persson S, Ehrhardt D, Drakakaki G. CESA TRAFFICKING INHIBITOR inhibits cellulose deposition and interferes with the trafficking of cellulose synthase complexes and their associated proteins KORRIGAN1 and POM2/CELLULOSE SYNTHASE INTERACTIVE PROTEIN1. PLANT PHYSIOLOGY 2015; 167:381-93. [PMID: 25535279 PMCID: PMC4326758 DOI: 10.1104/pp.114.249003] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/02/2023]
Abstract
Cellulose synthase complexes (CSCs) at the plasma membrane (PM) are aligned with cortical microtubules (MTs) and direct the biosynthesis of cellulose. The mechanism of the interaction between CSCs and MTs, and the cellular determinants that control the delivery of CSCs at the PM, are not yet well understood. We identified a unique small molecule, CESA TRAFFICKING INHIBITOR (CESTRIN), which reduces cellulose content and alters the anisotropic growth of Arabidopsis (Arabidopsis thaliana) hypocotyls. We monitored the distribution and mobility of fluorescently labeled cellulose synthases (CESAs) in live Arabidopsis cells under chemical exposure to characterize their subcellular effects. CESTRIN reduces the velocity of PM CSCs and causes their accumulation in the cell cortex. The CSC-associated proteins KORRIGAN1 (KOR1) and POM2/CELLULOSE SYNTHASE INTERACTIVE PROTEIN1 (CSI1) were differentially affected by CESTRIN treatment, indicating different forms of association with the PM CSCs. KOR1 accumulated in bodies similar to CESA; however, POM2/CSI1 dissociated into the cytoplasm. In addition, MT stability was altered without direct inhibition of MT polymerization, suggesting a feedback mechanism caused by cellulose interference. The selectivity of CESTRIN was assessed using a variety of subcellular markers for which no morphological effect was observed. The association of CESAs with vesicles decorated by the trans-Golgi network-localized protein SYNTAXIN OF PLANTS61 (SYP61) was increased under CESTRIN treatment, implicating SYP61 compartments in CESA trafficking. The properties of CESTRIN compared with known CESA inhibitors afford unique avenues to study and understand the mechanism under which PM-associated CSCs are maintained and interact with MTs and to dissect their trafficking routes in etiolated hypocotyls.
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Affiliation(s)
- Natasha Worden
- Departments of Plant Sciences (N.W., T.E.W., V.E.E., J.L., G.D.) and Veterinary Medicine (R.J., B.W.), University of California, Davis, California 95616;Max-Planck-Institute of Molecular Plant Physiology, Science Campus, 14476 Golm, Germany (R.L., S.P.);Institut National de la Recherche Agronomique, Institute Jean-Pierre Bourgin, 78026 Versailles, France (S.V.);Department of Botany and Plant Sciences, University of California, Riverside, California 92521 (G.H.);Department of Plant and Microbial Biology, North Caroline State University, Raleigh, North Carolina 27695 (J.A.);Australian Research Council Centre of Excellence in Plant Cell Walls, School of Botany, University of Melbourne, Parkville, Victoria 3010, Australia (S.P.); andDepartment of Plant Biology, Carnegie Institution for Science, Stanford, California 94305 (D.E.)
| | - Thomas E Wilkop
- Departments of Plant Sciences (N.W., T.E.W., V.E.E., J.L., G.D.) and Veterinary Medicine (R.J., B.W.), University of California, Davis, California 95616;Max-Planck-Institute of Molecular Plant Physiology, Science Campus, 14476 Golm, Germany (R.L., S.P.);Institut National de la Recherche Agronomique, Institute Jean-Pierre Bourgin, 78026 Versailles, France (S.V.);Department of Botany and Plant Sciences, University of California, Riverside, California 92521 (G.H.);Department of Plant and Microbial Biology, North Caroline State University, Raleigh, North Carolina 27695 (J.A.);Australian Research Council Centre of Excellence in Plant Cell Walls, School of Botany, University of Melbourne, Parkville, Victoria 3010, Australia (S.P.); andDepartment of Plant Biology, Carnegie Institution for Science, Stanford, California 94305 (D.E.)
| | - Victor Esteva Esteve
- Departments of Plant Sciences (N.W., T.E.W., V.E.E., J.L., G.D.) and Veterinary Medicine (R.J., B.W.), University of California, Davis, California 95616;Max-Planck-Institute of Molecular Plant Physiology, Science Campus, 14476 Golm, Germany (R.L., S.P.);Institut National de la Recherche Agronomique, Institute Jean-Pierre Bourgin, 78026 Versailles, France (S.V.);Department of Botany and Plant Sciences, University of California, Riverside, California 92521 (G.H.);Department of Plant and Microbial Biology, North Caroline State University, Raleigh, North Carolina 27695 (J.A.);Australian Research Council Centre of Excellence in Plant Cell Walls, School of Botany, University of Melbourne, Parkville, Victoria 3010, Australia (S.P.); andDepartment of Plant Biology, Carnegie Institution for Science, Stanford, California 94305 (D.E.)
| | - Richard Jeannotte
- Departments of Plant Sciences (N.W., T.E.W., V.E.E., J.L., G.D.) and Veterinary Medicine (R.J., B.W.), University of California, Davis, California 95616;Max-Planck-Institute of Molecular Plant Physiology, Science Campus, 14476 Golm, Germany (R.L., S.P.);Institut National de la Recherche Agronomique, Institute Jean-Pierre Bourgin, 78026 Versailles, France (S.V.);Department of Botany and Plant Sciences, University of California, Riverside, California 92521 (G.H.);Department of Plant and Microbial Biology, North Caroline State University, Raleigh, North Carolina 27695 (J.A.);Australian Research Council Centre of Excellence in Plant Cell Walls, School of Botany, University of Melbourne, Parkville, Victoria 3010, Australia (S.P.); andDepartment of Plant Biology, Carnegie Institution for Science, Stanford, California 94305 (D.E.)
| | - Rahul Lathe
- Departments of Plant Sciences (N.W., T.E.W., V.E.E., J.L., G.D.) and Veterinary Medicine (R.J., B.W.), University of California, Davis, California 95616;Max-Planck-Institute of Molecular Plant Physiology, Science Campus, 14476 Golm, Germany (R.L., S.P.);Institut National de la Recherche Agronomique, Institute Jean-Pierre Bourgin, 78026 Versailles, France (S.V.);Department of Botany and Plant Sciences, University of California, Riverside, California 92521 (G.H.);Department of Plant and Microbial Biology, North Caroline State University, Raleigh, North Carolina 27695 (J.A.);Australian Research Council Centre of Excellence in Plant Cell Walls, School of Botany, University of Melbourne, Parkville, Victoria 3010, Australia (S.P.); andDepartment of Plant Biology, Carnegie Institution for Science, Stanford, California 94305 (D.E.)
| | - Samantha Vernhettes
- Departments of Plant Sciences (N.W., T.E.W., V.E.E., J.L., G.D.) and Veterinary Medicine (R.J., B.W.), University of California, Davis, California 95616;Max-Planck-Institute of Molecular Plant Physiology, Science Campus, 14476 Golm, Germany (R.L., S.P.);Institut National de la Recherche Agronomique, Institute Jean-Pierre Bourgin, 78026 Versailles, France (S.V.);Department of Botany and Plant Sciences, University of California, Riverside, California 92521 (G.H.);Department of Plant and Microbial Biology, North Caroline State University, Raleigh, North Carolina 27695 (J.A.);Australian Research Council Centre of Excellence in Plant Cell Walls, School of Botany, University of Melbourne, Parkville, Victoria 3010, Australia (S.P.); andDepartment of Plant Biology, Carnegie Institution for Science, Stanford, California 94305 (D.E.)
| | - Bart Weimer
- Departments of Plant Sciences (N.W., T.E.W., V.E.E., J.L., G.D.) and Veterinary Medicine (R.J., B.W.), University of California, Davis, California 95616;Max-Planck-Institute of Molecular Plant Physiology, Science Campus, 14476 Golm, Germany (R.L., S.P.);Institut National de la Recherche Agronomique, Institute Jean-Pierre Bourgin, 78026 Versailles, France (S.V.);Department of Botany and Plant Sciences, University of California, Riverside, California 92521 (G.H.);Department of Plant and Microbial Biology, North Caroline State University, Raleigh, North Carolina 27695 (J.A.);Australian Research Council Centre of Excellence in Plant Cell Walls, School of Botany, University of Melbourne, Parkville, Victoria 3010, Australia (S.P.); andDepartment of Plant Biology, Carnegie Institution for Science, Stanford, California 94305 (D.E.)
| | - Glenn Hicks
- Departments of Plant Sciences (N.W., T.E.W., V.E.E., J.L., G.D.) and Veterinary Medicine (R.J., B.W.), University of California, Davis, California 95616;Max-Planck-Institute of Molecular Plant Physiology, Science Campus, 14476 Golm, Germany (R.L., S.P.);Institut National de la Recherche Agronomique, Institute Jean-Pierre Bourgin, 78026 Versailles, France (S.V.);Department of Botany and Plant Sciences, University of California, Riverside, California 92521 (G.H.);Department of Plant and Microbial Biology, North Caroline State University, Raleigh, North Carolina 27695 (J.A.);Australian Research Council Centre of Excellence in Plant Cell Walls, School of Botany, University of Melbourne, Parkville, Victoria 3010, Australia (S.P.); andDepartment of Plant Biology, Carnegie Institution for Science, Stanford, California 94305 (D.E.)
| | - Jose Alonso
- Departments of Plant Sciences (N.W., T.E.W., V.E.E., J.L., G.D.) and Veterinary Medicine (R.J., B.W.), University of California, Davis, California 95616;Max-Planck-Institute of Molecular Plant Physiology, Science Campus, 14476 Golm, Germany (R.L., S.P.);Institut National de la Recherche Agronomique, Institute Jean-Pierre Bourgin, 78026 Versailles, France (S.V.);Department of Botany and Plant Sciences, University of California, Riverside, California 92521 (G.H.);Department of Plant and Microbial Biology, North Caroline State University, Raleigh, North Carolina 27695 (J.A.);Australian Research Council Centre of Excellence in Plant Cell Walls, School of Botany, University of Melbourne, Parkville, Victoria 3010, Australia (S.P.); andDepartment of Plant Biology, Carnegie Institution for Science, Stanford, California 94305 (D.E.)
| | - John Labavitch
- Departments of Plant Sciences (N.W., T.E.W., V.E.E., J.L., G.D.) and Veterinary Medicine (R.J., B.W.), University of California, Davis, California 95616;Max-Planck-Institute of Molecular Plant Physiology, Science Campus, 14476 Golm, Germany (R.L., S.P.);Institut National de la Recherche Agronomique, Institute Jean-Pierre Bourgin, 78026 Versailles, France (S.V.);Department of Botany and Plant Sciences, University of California, Riverside, California 92521 (G.H.);Department of Plant and Microbial Biology, North Caroline State University, Raleigh, North Carolina 27695 (J.A.);Australian Research Council Centre of Excellence in Plant Cell Walls, School of Botany, University of Melbourne, Parkville, Victoria 3010, Australia (S.P.); andDepartment of Plant Biology, Carnegie Institution for Science, Stanford, California 94305 (D.E.)
| | - Staffan Persson
- Departments of Plant Sciences (N.W., T.E.W., V.E.E., J.L., G.D.) and Veterinary Medicine (R.J., B.W.), University of California, Davis, California 95616;Max-Planck-Institute of Molecular Plant Physiology, Science Campus, 14476 Golm, Germany (R.L., S.P.);Institut National de la Recherche Agronomique, Institute Jean-Pierre Bourgin, 78026 Versailles, France (S.V.);Department of Botany and Plant Sciences, University of California, Riverside, California 92521 (G.H.);Department of Plant and Microbial Biology, North Caroline State University, Raleigh, North Carolina 27695 (J.A.);Australian Research Council Centre of Excellence in Plant Cell Walls, School of Botany, University of Melbourne, Parkville, Victoria 3010, Australia (S.P.); andDepartment of Plant Biology, Carnegie Institution for Science, Stanford, California 94305 (D.E.)
| | - David Ehrhardt
- Departments of Plant Sciences (N.W., T.E.W., V.E.E., J.L., G.D.) and Veterinary Medicine (R.J., B.W.), University of California, Davis, California 95616;Max-Planck-Institute of Molecular Plant Physiology, Science Campus, 14476 Golm, Germany (R.L., S.P.);Institut National de la Recherche Agronomique, Institute Jean-Pierre Bourgin, 78026 Versailles, France (S.V.);Department of Botany and Plant Sciences, University of California, Riverside, California 92521 (G.H.);Department of Plant and Microbial Biology, North Caroline State University, Raleigh, North Carolina 27695 (J.A.);Australian Research Council Centre of Excellence in Plant Cell Walls, School of Botany, University of Melbourne, Parkville, Victoria 3010, Australia (S.P.); andDepartment of Plant Biology, Carnegie Institution for Science, Stanford, California 94305 (D.E.)
| | - Georgia Drakakaki
- Departments of Plant Sciences (N.W., T.E.W., V.E.E., J.L., G.D.) and Veterinary Medicine (R.J., B.W.), University of California, Davis, California 95616;Max-Planck-Institute of Molecular Plant Physiology, Science Campus, 14476 Golm, Germany (R.L., S.P.);Institut National de la Recherche Agronomique, Institute Jean-Pierre Bourgin, 78026 Versailles, France (S.V.);Department of Botany and Plant Sciences, University of California, Riverside, California 92521 (G.H.);Department of Plant and Microbial Biology, North Caroline State University, Raleigh, North Carolina 27695 (J.A.);Australian Research Council Centre of Excellence in Plant Cell Walls, School of Botany, University of Melbourne, Parkville, Victoria 3010, Australia (S.P.); andDepartment of Plant Biology, Carnegie Institution for Science, Stanford, California 94305 (D.E.)
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21
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Jiang L, Yan S, Yang W, Li Y, Xia M, Chen Z, Wang Q, Yan L, Song X, Liu R, Zhang X. Transcriptomic analysis reveals the roles of microtubule-related genes and transcription factors in fruit length regulation in cucumber (Cucumis sativus L.). Sci Rep 2015; 5:8031. [PMID: 25619948 PMCID: PMC5379036 DOI: 10.1038/srep08031] [Citation(s) in RCA: 55] [Impact Index Per Article: 6.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/15/2014] [Accepted: 12/18/2014] [Indexed: 11/09/2022] Open
Abstract
Cucumber (Cucumis sativus L.) fruit is a type of fleshy fruit that is harvested immaturely. Early fruit development directly determines the final fruit length and diameter, and consequently the fruit yield and quality. Different cucumber varieties display huge variations of fruit length, but how fruit length is determined at the molecular level remains poorly understood. To understand the genes and gene networks that regulate fruit length in cucumber, high throughout RNA-Seq data were used to compare the transcriptomes of early fruit from two near isogenic lines with different fruit lengths. 3955 genes were found to be differentially expressed, among which 2368 genes were significantly up-regulated and 1587 down-regulated in the line with long fruit. Microtubule and cell cycle related genes were dramatically activated in the long fruit, and transcription factors were implicated in the fruit length regulation in cucumber. Thus, our results built a foundation for dissecting the molecular mechanism of fruit length control in cucumber, a key agricultural trait of significant economic importance.
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Affiliation(s)
- Li Jiang
- Department of Vegetable Sciences, Beijing Key Laboratory of Growth and Developmental Regulation for Protected Vegetable Crops, China Agricultural University, Beijing 100193, China
| | - Shuangshuang Yan
- Department of Vegetable Sciences, Beijing Key Laboratory of Growth and Developmental Regulation for Protected Vegetable Crops, China Agricultural University, Beijing 100193, China
| | - Wencai Yang
- Department of Vegetable Sciences, Beijing Key Laboratory of Growth and Developmental Regulation for Protected Vegetable Crops, China Agricultural University, Beijing 100193, China
| | - Yanqiang Li
- Shanghai Center for Plant Stress Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai 201602, China
| | - Mengxue Xia
- Department of Vegetable Sciences, Beijing Key Laboratory of Growth and Developmental Regulation for Protected Vegetable Crops, China Agricultural University, Beijing 100193, China
| | - Zijing Chen
- Department of Vegetable Sciences, Beijing Key Laboratory of Growth and Developmental Regulation for Protected Vegetable Crops, China Agricultural University, Beijing 100193, China
| | - Qian Wang
- Department of Vegetable Sciences, Beijing Key Laboratory of Growth and Developmental Regulation for Protected Vegetable Crops, China Agricultural University, Beijing 100193, China
| | - Liying Yan
- College of Horticulture Science and Technology, Qinhuangdao 066004, China
| | - Xiaofei Song
- Analysis and Testing Centre, Hebei Normal University of Science and Technology, Qinhuangdao 066004, China
| | - Renyi Liu
- Shanghai Center for Plant Stress Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai 201602, China
| | - Xiaolan Zhang
- Department of Vegetable Sciences, Beijing Key Laboratory of Growth and Developmental Regulation for Protected Vegetable Crops, China Agricultural University, Beijing 100193, China
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22
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Cai G, Parrotta L, Cresti M. Organelle trafficking, the cytoskeleton, and pollen tube growth. JOURNAL OF INTEGRATIVE PLANT BIOLOGY 2015; 57:63-78. [PMID: 25263392 DOI: 10.1111/jipb.12289] [Citation(s) in RCA: 40] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/29/2014] [Accepted: 09/23/2014] [Indexed: 06/03/2023]
Abstract
The pollen tube is fundamental for the reproduction of seed plants. Characteristically, it grows relatively quickly and uni-directionally ("polarized growth") to extend the male gametophyte to reach the female gametophyte. The pollen tube forms a channel through which the sperm cells move so that they can reach their targets in the ovule. To grow quickly and directionally, the pollen tube requires an intense movement of organelles and vesicles that allows the cell's contents to be distributed to sustain the growth rate. While the various organelles distribute more or less uniformly within the pollen tube, Golgi-released secretory vesicles accumulate massively at the pollen tube apex, that is, the growing region. This intense movement of organelles and vesicles is dependent on the dynamics of the cytoskeleton, which reorganizes differentially in response to external signals and coordinates membrane trafficking with the growth rate of pollen tubes.
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Affiliation(s)
- Giampiero Cai
- Department of Life Sciences, University of Siena, Siena, 53100, Italy
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23
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Onelli E, Idilli AI, Moscatelli A. Emerging roles for microtubules in angiosperm pollen tube growth highlight new research cues. FRONTIERS IN PLANT SCIENCE 2015; 6:51. [PMID: 25713579 PMCID: PMC4322846 DOI: 10.3389/fpls.2015.00051] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/14/2014] [Accepted: 01/20/2015] [Indexed: 05/21/2023]
Abstract
In plants, actin filaments have an important role in organelle movement and cytoplasmic streaming. Otherwise microtubules (MTs) have a role in restricting organelles to specific areas of the cell and in maintaining organelle morphology. In somatic plant cells, MTs also participate in cell division and morphogenesis, allowing cells to take their definitive shape in order to perform specific functions. In the latter case, MTs influence assembly of the cell wall, controlling the delivery of enzymes involved in cellulose synthesis and of wall modulation material to the proper sites. In angiosperm pollen tubes, organelle movement is generally attributed to the acto-myosin system, the main role of which is in distributing organelles in the cytoplasm and in carrying secretory vesicles to the apex for polarized growth. Recent data on membrane trafficking suggests a role of MTs in fine delivery and repositioning of vesicles to sustain pollen tube growth. This review examines the role of MTs in secretion and endocytosis, highlighting new research cues regarding cell wall construction and pollen tube-pistil crosstalk, that help unravel the role of MTs in polarized growth.
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Affiliation(s)
| | - Aurora I. Idilli
- Institute of Biophysics, National Research Council and Fondazione Bruno Kessler, Trento, Italy
| | - Alessandra Moscatelli
- Department of Biosciences, University of Milan, Milan, Italy
- *Correspondence: Alessandra Moscatelli, Department of Biosciences, University of Milan, Via Celoria, 26, 20113 Milano, Italy e-mail:
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24
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Lang I, Sassmann S, Schmidt B, Komis G. Plasmolysis: Loss of Turgor and Beyond. PLANTS (BASEL, SWITZERLAND) 2014; 3:583-93. [PMID: 27135521 PMCID: PMC4844282 DOI: 10.3390/plants3040583] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/10/2014] [Revised: 10/15/2014] [Accepted: 11/14/2014] [Indexed: 11/17/2022]
Abstract
Plasmolysis is a typical response of plant cells exposed to hyperosmotic stress. The loss of turgor causes the violent detachment of the living protoplast from the cell wall. The plasmolytic process is mainly driven by the vacuole. Plasmolysis is reversible (deplasmolysis) and characteristic to living plant cells. Obviously, dramatic structural changes are required to fulfill a plasmolytic cycle. In the present paper, the fate of cortical microtubules and actin microfilaments is documented throughout a plasmolytic cycle in living cells of green fluorescent protein (GFP) tagged Arabidopsis lines. While the microtubules became wavy and highly bundled during plasmolysis, cortical filamentous actin remained in close vicinity to the plasma membrane lining the sites of concave plasmolysis and adjusting readily to the diminished size of the protoplast. During deplasmolysis, cortical microtubule re-organization progressed slowly and required up to 24 h to complete the restoration of the original pre-plasmolytic pattern. Actin microfilaments, again, recovered faster and organelle movement remained intact throughout the whole process. In summary, the hydrostatic skeleton resulting from the osmotic state of the plant vacuole "overrules" the stabilization by cortical cytoskeletal elements.
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Affiliation(s)
- Ingeborg Lang
- Cell Imaging and Ultrastructure Research, University of Vienna, Althanstrasse 14, A-1090 Vienna, Austria.
| | - Stefan Sassmann
- Cell Imaging and Ultrastructure Research, University of Vienna, Althanstrasse 14, A-1090 Vienna, Austria.
| | - Brigitte Schmidt
- Cell Imaging and Ultrastructure Research, University of Vienna, Althanstrasse 14, A-1090 Vienna, Austria.
| | - George Komis
- CR-Hana, Palacký University Olomouc, Šlechtitelů 586/11, 783 71 Olomouc-Holice, Czech Republic.
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25
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Vain T, Crowell EF, Timpano H, Biot E, Desprez T, Mansoori N, Trindade LM, Pagant S, Robert S, Höfte H, Gonneau M, Vernhettes S. The Cellulase KORRIGAN Is Part of the Cellulose Synthase Complex. PLANT PHYSIOLOGY 2014; 165:1521-1532. [PMID: 24948829 PMCID: PMC4119035 DOI: 10.1104/pp.114.241216] [Citation(s) in RCA: 118] [Impact Index Per Article: 11.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/02/2023]
Abstract
Plant growth and organ formation depend on the oriented deposition of load-bearing cellulose microfibrils in the cell wall. Cellulose is synthesized by a large relative molecular weight cellulose synthase complex (CSC), which comprises at least three distinct cellulose synthases. Cellulose synthesis in plants or bacteria also requires the activity of an endo-1,4-β-d-glucanase, the exact function of which in the synthesis process is not known. Here, we show, to our knowledge for the first time, that a leaky mutation in the Arabidopsis (Arabidopsis thaliana) membrane-bound endo-1,4-β-d-glucanase KORRIGAN1 (KOR1) not only caused reduced CSC movement in the plasma membrane but also a reduced cellulose synthesis inhibitor-induced accumulation of CSCs in intracellular compartments. This suggests a role for KOR1 both in the synthesis of cellulose microfibrils and in the intracellular trafficking of CSCs. Next, we used a multidisciplinary approach, including live cell imaging, gel filtration chromatography analysis, split ubiquitin assays in yeast (Saccharomyces cerevisiae NMY51), and bimolecular fluorescence complementation, to show that, in contrast to previous observations, KOR1 is an integral part of the primary cell wall CSC in the plasma membrane.
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Affiliation(s)
- Thomas Vain
- Institut National de la Recherche Agronomique, Unité Mixte de Recherche 1318, Institut Jean-Pierre Bourgin, Saclay Plant Sciences, F-78000 Versailles, France (T.V., E.F.C., H.T., E.B., T.D., S.P., S.R., H.H., M.G., S.V.);AgroParisTech, Institut Jean-Pierre Bourgin, F-78000 Versailles, France (T.V., E.F.C., H.T., E.B., T.D., H.H., M.G., S.V.); andWageningen University and Research Plant Breeding, Wageningen University and Research Centre, 6708 PD Wageningen, The Netherlands (N.M., L.M.T.)
| | - Elizabeth Faris Crowell
- Institut National de la Recherche Agronomique, Unité Mixte de Recherche 1318, Institut Jean-Pierre Bourgin, Saclay Plant Sciences, F-78000 Versailles, France (T.V., E.F.C., H.T., E.B., T.D., S.P., S.R., H.H., M.G., S.V.);AgroParisTech, Institut Jean-Pierre Bourgin, F-78000 Versailles, France (T.V., E.F.C., H.T., E.B., T.D., H.H., M.G., S.V.); andWageningen University and Research Plant Breeding, Wageningen University and Research Centre, 6708 PD Wageningen, The Netherlands (N.M., L.M.T.)
| | - Hélène Timpano
- Institut National de la Recherche Agronomique, Unité Mixte de Recherche 1318, Institut Jean-Pierre Bourgin, Saclay Plant Sciences, F-78000 Versailles, France (T.V., E.F.C., H.T., E.B., T.D., S.P., S.R., H.H., M.G., S.V.);AgroParisTech, Institut Jean-Pierre Bourgin, F-78000 Versailles, France (T.V., E.F.C., H.T., E.B., T.D., H.H., M.G., S.V.); andWageningen University and Research Plant Breeding, Wageningen University and Research Centre, 6708 PD Wageningen, The Netherlands (N.M., L.M.T.)
| | - Eric Biot
- Institut National de la Recherche Agronomique, Unité Mixte de Recherche 1318, Institut Jean-Pierre Bourgin, Saclay Plant Sciences, F-78000 Versailles, France (T.V., E.F.C., H.T., E.B., T.D., S.P., S.R., H.H., M.G., S.V.);AgroParisTech, Institut Jean-Pierre Bourgin, F-78000 Versailles, France (T.V., E.F.C., H.T., E.B., T.D., H.H., M.G., S.V.); andWageningen University and Research Plant Breeding, Wageningen University and Research Centre, 6708 PD Wageningen, The Netherlands (N.M., L.M.T.)
| | - Thierry Desprez
- Institut National de la Recherche Agronomique, Unité Mixte de Recherche 1318, Institut Jean-Pierre Bourgin, Saclay Plant Sciences, F-78000 Versailles, France (T.V., E.F.C., H.T., E.B., T.D., S.P., S.R., H.H., M.G., S.V.);AgroParisTech, Institut Jean-Pierre Bourgin, F-78000 Versailles, France (T.V., E.F.C., H.T., E.B., T.D., H.H., M.G., S.V.); andWageningen University and Research Plant Breeding, Wageningen University and Research Centre, 6708 PD Wageningen, The Netherlands (N.M., L.M.T.)
| | - Nasim Mansoori
- Institut National de la Recherche Agronomique, Unité Mixte de Recherche 1318, Institut Jean-Pierre Bourgin, Saclay Plant Sciences, F-78000 Versailles, France (T.V., E.F.C., H.T., E.B., T.D., S.P., S.R., H.H., M.G., S.V.);AgroParisTech, Institut Jean-Pierre Bourgin, F-78000 Versailles, France (T.V., E.F.C., H.T., E.B., T.D., H.H., M.G., S.V.); andWageningen University and Research Plant Breeding, Wageningen University and Research Centre, 6708 PD Wageningen, The Netherlands (N.M., L.M.T.)
| | - Luisa M Trindade
- Institut National de la Recherche Agronomique, Unité Mixte de Recherche 1318, Institut Jean-Pierre Bourgin, Saclay Plant Sciences, F-78000 Versailles, France (T.V., E.F.C., H.T., E.B., T.D., S.P., S.R., H.H., M.G., S.V.);AgroParisTech, Institut Jean-Pierre Bourgin, F-78000 Versailles, France (T.V., E.F.C., H.T., E.B., T.D., H.H., M.G., S.V.); andWageningen University and Research Plant Breeding, Wageningen University and Research Centre, 6708 PD Wageningen, The Netherlands (N.M., L.M.T.)
| | - Silvère Pagant
- Institut National de la Recherche Agronomique, Unité Mixte de Recherche 1318, Institut Jean-Pierre Bourgin, Saclay Plant Sciences, F-78000 Versailles, France (T.V., E.F.C., H.T., E.B., T.D., S.P., S.R., H.H., M.G., S.V.);AgroParisTech, Institut Jean-Pierre Bourgin, F-78000 Versailles, France (T.V., E.F.C., H.T., E.B., T.D., H.H., M.G., S.V.); andWageningen University and Research Plant Breeding, Wageningen University and Research Centre, 6708 PD Wageningen, The Netherlands (N.M., L.M.T.)
| | - Stéphanie Robert
- Institut National de la Recherche Agronomique, Unité Mixte de Recherche 1318, Institut Jean-Pierre Bourgin, Saclay Plant Sciences, F-78000 Versailles, France (T.V., E.F.C., H.T., E.B., T.D., S.P., S.R., H.H., M.G., S.V.);AgroParisTech, Institut Jean-Pierre Bourgin, F-78000 Versailles, France (T.V., E.F.C., H.T., E.B., T.D., H.H., M.G., S.V.); andWageningen University and Research Plant Breeding, Wageningen University and Research Centre, 6708 PD Wageningen, The Netherlands (N.M., L.M.T.)
| | - Herman Höfte
- Institut National de la Recherche Agronomique, Unité Mixte de Recherche 1318, Institut Jean-Pierre Bourgin, Saclay Plant Sciences, F-78000 Versailles, France (T.V., E.F.C., H.T., E.B., T.D., S.P., S.R., H.H., M.G., S.V.);AgroParisTech, Institut Jean-Pierre Bourgin, F-78000 Versailles, France (T.V., E.F.C., H.T., E.B., T.D., H.H., M.G., S.V.); andWageningen University and Research Plant Breeding, Wageningen University and Research Centre, 6708 PD Wageningen, The Netherlands (N.M., L.M.T.)
| | - Martine Gonneau
- Institut National de la Recherche Agronomique, Unité Mixte de Recherche 1318, Institut Jean-Pierre Bourgin, Saclay Plant Sciences, F-78000 Versailles, France (T.V., E.F.C., H.T., E.B., T.D., S.P., S.R., H.H., M.G., S.V.);AgroParisTech, Institut Jean-Pierre Bourgin, F-78000 Versailles, France (T.V., E.F.C., H.T., E.B., T.D., H.H., M.G., S.V.); andWageningen University and Research Plant Breeding, Wageningen University and Research Centre, 6708 PD Wageningen, The Netherlands (N.M., L.M.T.)
| | - Samantha Vernhettes
- Institut National de la Recherche Agronomique, Unité Mixte de Recherche 1318, Institut Jean-Pierre Bourgin, Saclay Plant Sciences, F-78000 Versailles, France (T.V., E.F.C., H.T., E.B., T.D., S.P., S.R., H.H., M.G., S.V.);AgroParisTech, Institut Jean-Pierre Bourgin, F-78000 Versailles, France (T.V., E.F.C., H.T., E.B., T.D., H.H., M.G., S.V.); andWageningen University and Research Plant Breeding, Wageningen University and Research Centre, 6708 PD Wageningen, The Netherlands (N.M., L.M.T.)
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26
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Lei L, Zhang T, Strasser R, Lee CM, Gonneau M, Mach L, Vernhettes S, Kim SH, J Cosgrove D, Li S, Gu Y. The jiaoyao1 Mutant Is an Allele of korrigan1 That Abolishes Endoglucanase Activity and Affects the Organization of Both Cellulose Microfibrils and Microtubules in Arabidopsis. THE PLANT CELL 2014; 26:2601-2616. [PMID: 24963054 PMCID: PMC4114954 DOI: 10.1105/tpc.114.126193] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/04/2023]
Abstract
In higher plants, cellulose is synthesized by plasma membrane-localized cellulose synthase complexes (CSCs). Arabidopsis thaliana GH9A1/KORRIGAN1 is a membrane-bound, family 9 glycosyl hydrolase that is important for cellulose synthesis in both primary and secondary cell walls. Most previously identified korrigan1 mutants show severe phenotypes such as embryo lethality; therefore, the role of GH9A1 in cellulose synthesis remains unclear. Here, we report a novel A577V missense mutation, designated jiaoyao1 (jia1), in the second of the glycosyl hydrolase family 9 active site signature motifs in GH9A1. jia1 is defective in cell expansion in dark-grown hypocotyls, roots, and adult plants. Consistent with its defect in cell expansion, this mutation in GH9A1 resulted in reduced cellulose content and reduced CSC velocity at the plasma membrane. Green fluorescent protein-GH9A1 is associated with CSCs at multiple locations, including the plasma membrane, Golgi, trans-Golgi network, and small CESA-containing compartments or microtubule-associated cellulose synthase compartments, indicating a tight association between GH9A1 and CSCs. GH9A1A577V abolishes the endoglucanase activity of GH9A1 in vitro but does not affect its interaction with CESAs in vitro, suggesting that endoglucanase activity is important for cellulose synthesis. Interestingly, jia1 results in both cellulose microfibril and microtubule disorganization. Our study establishes the important role of endoglucanase in cellulose synthesis and cellulose microfibril organization in plants.
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Affiliation(s)
- Lei Lei
- Department of Biochemistry and Molecular Biology, Pennsylvania State University, University Park, Pennsylvania 16802
| | - Tian Zhang
- Department of Biology, Pennsylvania State University, University Park, Pennsylvania 16802
| | - Richard Strasser
- Department of Applied Genetics and Cell Biology, University of Natural Resources and Life Sciences, A-1190 Vienna, Austria
| | - Christopher M Lee
- Chemical Engineering and Materials Research Institute, Pennsylvania State University, University Park, Pennsylvania 16802
| | - Martine Gonneau
- Institut Jean-Pierre Bourgin, Unité Mixte de Recherche 1318 INRA-AgroParisTech, 78026 Versailles, France
| | - Lukas Mach
- Department of Applied Genetics and Cell Biology, University of Natural Resources and Life Sciences, A-1190 Vienna, Austria
| | - Samantha Vernhettes
- Department of Applied Genetics and Cell Biology, University of Natural Resources and Life Sciences, A-1190 Vienna, Austria
| | - Seong H Kim
- Chemical Engineering and Materials Research Institute, Pennsylvania State University, University Park, Pennsylvania 16802
| | - Daniel J Cosgrove
- Department of Biology, Pennsylvania State University, University Park, Pennsylvania 16802
| | - Shundai Li
- Department of Biochemistry and Molecular Biology, Pennsylvania State University, University Park, Pennsylvania 16802
| | - Ying Gu
- Department of Biochemistry and Molecular Biology, Pennsylvania State University, University Park, Pennsylvania 16802
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27
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Thomas C, Staiger CJ. A dynamic interplay between membranes and the cytoskeleton critical for cell development and signaling. FRONTIERS IN PLANT SCIENCE 2014; 5:335. [PMID: 25076954 PMCID: PMC4099933 DOI: 10.3389/fpls.2014.00335] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/20/2014] [Accepted: 06/24/2014] [Indexed: 05/04/2023]
Affiliation(s)
- Clément Thomas
- Laboratory of Cellular and Molecular Oncology, Department of Oncology, Public Research Centre for HealthLuxembourg, Luxembourg
- *Correspondence: ;
| | - Christopher J. Staiger
- Department of Biological Sciences, Purdue UniversityWest Lafayette, IN, USA
- *Correspondence: ;
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