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Gao H, Wu F. Physiological and transcriptomic analysis of tomato in response to sub-optimal temperature stress. PLANT SIGNALING & BEHAVIOR 2024; 19:2332018. [PMID: 38511566 PMCID: PMC10962623 DOI: 10.1080/15592324.2024.2332018] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/16/2023] [Accepted: 02/06/2024] [Indexed: 03/22/2024]
Abstract
Tomato (Solanum lycopersicum L.) is one of the most important economic crops in China. However, its quality and yield are susceptible to the adverse effects of low temperatures. In our study, two tomato cultivars, showing different tolerance to low temperatures, namely the cold-sensitive tomato cultivar (S708) and cold-tolerant tomato cultivar (T722), were grown at optimal (25/18°C) and sub-optimal (15/10°C) temperature conditions for 5 days. Our study aimed to explore the effect of sub-optimal temperature on fresh weight, chlorophyll content and chlorophyll fluorescence, soluble sugars and proline content of two tomato cultivars. Moreover, we employed RNA-Seq to analyze the transcriptomic response of tomato roots to sub-optimal temperature. The results revealed that S708 showed a more significant reduction in fresh weight, chlorophyll content, photochemical efficiency of PSII (YII), maximum quantum yield of PSII (Fv/Fm), photochemical quenching (qP) and electron transport rate (ETR) compared to T722 under the sub-optimal temperature condition. Notably, T722 maintained higher level of soluble sugars and proline in comparison to S708 uner sub-optimal temperature. RNA-seq data showed that up-regulated DEGs in both tomato cultivars were involved in "plant-pathogen interaction", "MAPK signaling pathway", "plant hormone signal transduction", and "phosphatidylinositol signaling system". Furthermore, "Amino sugar and nucleotide sugar metabolism" pathway was enriched only in T722. Moreover, under sub-optimal temperature, transcription factor genes and osmoregulation genes showed varying degrees of response in both tomato cultivars. Conclusion: In summary, our results offer detailed insights into the response characteristics of tomato to sub-optimal temperature, providing valuable references for the practical management of tomato crops under sub-optimal temperature condition.
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Affiliation(s)
- Huan Gao
- College of Advanced Agriculture and Ecological Environment, Heilongjiang University, Harbin, China
| | - Fengzhi Wu
- Key Laboratory of Biology and Genetic Improvement of Horticultural Crops (Northeast Region), Ministry of Agriculture and Rural Affairs, Northeast Agricultural University, Harbin, China
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2
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Radosavljević M, Belović M, Cvetanović Kljakić A, Torbica A. Production, modification and degradation of fructans and fructooligosacharides by enzymes originated from plants. Int J Biol Macromol 2024; 269:131668. [PMID: 38649077 DOI: 10.1016/j.ijbiomac.2024.131668] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/26/2023] [Revised: 04/04/2024] [Accepted: 04/15/2024] [Indexed: 04/25/2024]
Abstract
Non-starch polysaccharides exhibit numerous beneficial health effects but compounds belonging to FODMAP (Fermentable Oligo- Di- and Monosaccharides and Polyols) has been recently connected to several gastrointestinal disorders. This review presents integrated literature data on the occurrence and types of fructans and fructooligosaccharids (classified as FODMAPs) as well as their degrading enzymes present in plants. Plants from the family Asteraceae and many monocotyledones, including families Poaceae and Liliaceae, are the most abundant sources of both fructans and fructan-degrading enzymes. So far, vast majority of publications concerning the application of these specific plants in production of bakery products is related to increase of dietary fibre content in these products. However, there is limited research on their effect on FODMAP content and fibre balance. The authors emphasize the possibility of application of enzyme rich plant extract in food production casting light on the new scientific approach to fibre modification.
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Affiliation(s)
- Miloš Radosavljević
- University of Novi Sad, Faculty of Technology, Bulevar cara Lazara 1, 21102 Novi Sad, Serbia.
| | - Miona Belović
- University of Novi Sad, Institute of Food Technology, Bulevar cara Lazara 1, 21102 Novi Sad, Serbia
| | | | - Aleksandra Torbica
- University of Novi Sad, Institute of Food Technology, Bulevar cara Lazara 1, 21102 Novi Sad, Serbia
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3
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Tornacı S, Erginer M, Gökalsın B, Aysan A, Çetin M, Sadauki M, Fındıklı N, Genç S, Sesal C, Toksoy Öner E. Investigating the cryoprotective efficacy of fructans in mammalian cell systems via a structure-functional perspective. Carbohydr Polym 2024; 328:121704. [PMID: 38220340 DOI: 10.1016/j.carbpol.2023.121704] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/28/2023] [Revised: 12/13/2023] [Accepted: 12/14/2023] [Indexed: 01/16/2024]
Abstract
Fructans have long been known with their role in protecting organisms against various stress factors due to their ability to induce controlled dehydration and support membrane stability. Considering the vital importance of such features in cryo-technologies, this study aimed to explore the cryoprotective efficacy of fructans in mammalian cell systems where structurally different fructan polymers were examined on in vitro cell models derived from organs such as the liver, frequently used in transplantation, osteoblast, and cord cells, commonly employed in cell banking, as well as human seminal fluids that are of vital importance in assisted reproductive technology. To gain insights into the fructan/membrane interplay, structural differences were linked to rheological properties as well as to lipid membrane interactions where both fluorescein leakage from unilamellar liposomes and membrane integrity of osteoblast cells were monitored. High survival rates obtained with human endothelial, osteoblast and liver cells for up to two months clearly showed that fructans could be considered as effective non-permeating cryoprotectants, especially for extended periods of cryopreservation. In trials with human seminal fluid, short chained levan in combination with human serum albumin and glycerol proved very effective in preserving semen samples across multiple patients without any morphological abnormalities.
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Affiliation(s)
- Selay Tornacı
- IBSB-Industrial Biotechnology and Systems Biology Research Group, Department of Bioengineering, Marmara University, Istanbul, Turkey
| | - Merve Erginer
- Istanbul University-Cerrahpaşa, Institute of Nanotechnology and Biotechnology, Istanbul, Turkey
| | - Barış Gökalsın
- Marmara University, Department of Biology, Istanbul, Turkey
| | - Arzu Aysan
- Gebze Technical University, Department of Molecular Biology and Genetics, Kocaeli, Turkey
| | - Metin Çetin
- Gebze Technical University, Department of Molecular Biology and Genetics, Kocaeli, Turkey
| | - Mubarak Sadauki
- IBSB-Industrial Biotechnology and Systems Biology Research Group, Department of Bioengineering, Marmara University, Istanbul, Turkey
| | - Necati Fındıklı
- Department of Biomedical Engineering, Beykent University, Istanbul, Turkey; Bahceci Health Group, Istanbul, Turkey
| | - Seval Genç
- Marmara University, Department of Metallurgical & Materials Engineering, Istanbul, Turkey
| | - Cenk Sesal
- Marmara University, Department of Biology, Istanbul, Turkey
| | - Ebru Toksoy Öner
- IBSB-Industrial Biotechnology and Systems Biology Research Group, Department of Bioengineering, Marmara University, Istanbul, Turkey.
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4
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Shi Y, Si D, Zhang X, Chen D, Han Z. Plant fructans: Recent advances in metabolism, evolution aspects and applications for human health. Curr Res Food Sci 2023; 7:100595. [PMID: 37744554 PMCID: PMC10517269 DOI: 10.1016/j.crfs.2023.100595] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/01/2022] [Revised: 04/26/2023] [Accepted: 09/14/2023] [Indexed: 09/26/2023] Open
Abstract
Fructans, fructose polymers, are one of the three major reserve carbohydrate in plants. The nutritional and therapeutic benefits of natural fructans in plants have attracted increasing interest by consumers and food industry. In the course of evolution, many plants have developed the ability of regulating plant fructans metabolism to produce fructans with different structures and chain lengths, which are strongly correlated with their survival in harsh environments. Exploring these evolution-related genes in fructans biosynthesis and de novo domestication of fructans-rich plants based on genome editing is a viable and promising approach to improve human dietary quality and reduce the risk of chronic disease. These advances will greatly facilitate breeding and production of tailor-made fructans as a healthy food ingredient from wild plants such as huangjing (Polygonatum cyrtonema). The purpose of this review is to broaden our knowledge on plant fructans biosynthesis, evolution and benefits to human health.
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Affiliation(s)
| | | | - Xinfeng Zhang
- State Key Laboratory of Subtropical Silviculture, Zhejiang A&F University, Hangzhou, 311300, China
| | - Donghong Chen
- State Key Laboratory of Subtropical Silviculture, Zhejiang A&F University, Hangzhou, 311300, China
| | - Zhigang Han
- State Key Laboratory of Subtropical Silviculture, Zhejiang A&F University, Hangzhou, 311300, China
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5
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Gaffey J, Rajuaria G, McMahon H, Ravindran R, Dominguez C, Jensen MA, Souza MF, Meers E, Aragonés MM, Skunca D, Sanders JPM. Green Biorefinery systems for the production of climate-smart sustainable products from grasses, legumes and green crop residues. Biotechnol Adv 2023; 66:108168. [PMID: 37146921 DOI: 10.1016/j.biotechadv.2023.108168] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/09/2022] [Revised: 04/10/2023] [Accepted: 05/02/2023] [Indexed: 05/07/2023]
Abstract
Grasses, legumes and green plant wastes represent a ubiquitous feedstock for developing a bioeconomy in regions across Europe. These feedstocks are often an important source of ruminant feed, although much remains unused or underutilised. In addition to proteins, these materials are rich in fibres, sugars, minerals and other components that could also be used as inputs for bio-based product development. Green Biorefinery processes and initiatives are being developed to better capitalise on the potential of these feedstocks to produce sustainable food, feed, materials and energy in an integrated way. Such systems may support a more sustainable primary production sector, enable the valorisation of green waste streams, and provide new business models for farmers. This review presents the current developments in Green Biorefining, focusing on a broad feedstock and product base to include different models of Green Biorefinery. It demonstrates the potential and wide applicability of Green Biorefinery systems, the range of bio-based product opportunities and highlights the way forward for their broader implementation. While the potential for new products is extensive, quality control approval will be required prior to market entry.
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Affiliation(s)
- James Gaffey
- Circular Bioeconomy Research Group, Shannon Applied Biotechnology Centre, Munster Technological University, Tralee V92 CX88, Ireland; BiOrbic Bioeconomy Research Centre, University College Dublin, Belfield, Dublin 4, Ireland; Dept. of Environmental Engineering, University of Limerick, Castletroy, Limerick V94 T9PX, Ireland.
| | - Gaurav Rajuaria
- Circular Bioeconomy Research Group, Shannon Applied Biotechnology Centre, Munster Technological University, Tralee V92 CX88, Ireland; BiOrbic Bioeconomy Research Centre, University College Dublin, Belfield, Dublin 4, Ireland
| | - Helena McMahon
- Circular Bioeconomy Research Group, Shannon Applied Biotechnology Centre, Munster Technological University, Tralee V92 CX88, Ireland; BiOrbic Bioeconomy Research Centre, University College Dublin, Belfield, Dublin 4, Ireland
| | - Rajeev Ravindran
- Circular Bioeconomy Research Group, Shannon Applied Biotechnology Centre, Munster Technological University, Tralee V92 CX88, Ireland; BiOrbic Bioeconomy Research Centre, University College Dublin, Belfield, Dublin 4, Ireland
| | - Carmen Dominguez
- Circular Bioeconomy Research Group, Shannon Applied Biotechnology Centre, Munster Technological University, Tralee V92 CX88, Ireland; BiOrbic Bioeconomy Research Centre, University College Dublin, Belfield, Dublin 4, Ireland
| | - Morten Ambye Jensen
- Aarhus University, Department of Biological and Chemical Engineering, Nørregade 44, 8000 Aarhus C, Denmark
| | - Macella F Souza
- Laboratory of Bioresource Recovery (RE-SOURCE LAB), Ghent University, Coupure Links 653, 9000 Ghent, Belgium
| | - Erik Meers
- Laboratory of Bioresource Recovery (RE-SOURCE LAB), Ghent University, Coupure Links 653, 9000 Ghent, Belgium
| | - Marta Macias Aragonés
- Technological Corporation of Andalusia (CTA), C Albert Einstein S/N, INSUR building, 4th floor, 41092 Seville, Spain
| | - Dubravka Skunca
- Faculty of Business and Law, MB University, Teodora Drajzera 27, 11040 Belgrade, Serbia
| | - Johan P M Sanders
- Grassa BV, Villafloraweg 1, 5928, SZ Venlo, the Netherlands; Valorization of Plant Production Chains, Wageningen University, Bornse Weilanden 9, 6708 WG Wageningen, the Netherlands
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6
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Sustek-Sánchez F, Rognli OA, Rostoks N, Sõmera M, Jaškūnė K, Kovi MR, Statkevičiūtė G, Sarmiento C. Improving abiotic stress tolerance of forage grasses - prospects of using genome editing. FRONTIERS IN PLANT SCIENCE 2023; 14:1127532. [PMID: 36824201 PMCID: PMC9941169 DOI: 10.3389/fpls.2023.1127532] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/19/2022] [Accepted: 01/24/2023] [Indexed: 06/18/2023]
Abstract
Due to an increase in the consumption of food, feed, and fuel and to meet global food security needs for the rapidly growing human population, there is a necessity to obtain high-yielding crops that can adapt to future climate changes. Currently, the main feed source used for ruminant livestock production is forage grasses. In temperate climate zones, perennial grasses grown for feed are widely distributed and tend to suffer under unfavorable environmental conditions. Genome editing has been shown to be an effective tool for the development of abiotic stress-resistant plants. The highly versatile CRISPR-Cas system enables increasingly complex modifications in genomes while maintaining precision and low off-target frequency mutations. In this review, we provide an overview of forage grass species that have been subjected to genome editing. We offer a perspective view on the generation of plants resilient to abiotic stresses. Due to the broad factors contributing to these stresses the review focuses on drought, salt, heat, and cold stresses. The application of new genomic techniques (e.g., CRISPR-Cas) allows addressing several challenges caused by climate change and abiotic stresses for developing forage grass cultivars with improved adaptation to the future climatic conditions. Genome editing will contribute towards developing safe and sustainable food systems.
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Affiliation(s)
- Ferenz Sustek-Sánchez
- Department of Chemistry and Biotechnology, Tallinn University of Technology, Tallinn, Estonia
| | - Odd Arne Rognli
- Department of Plant Sciences, Faculty of Biosciences, Norwegian University of Life Sciences (NMBU), Ås, Norway
| | - Nils Rostoks
- Department of Microbiology and Biotechnology, Faculty of Biology, University of Latvia, Riga, Latvia
| | - Merike Sõmera
- Department of Chemistry and Biotechnology, Tallinn University of Technology, Tallinn, Estonia
| | - Kristina Jaškūnė
- Laboratory of Genetics and Physiology, Institute of Agriculture, Lithuanian Research Centre for Agriculture and Forestry, Akademija, Lithuania
| | - Mallikarjuna Rao Kovi
- Department of Plant Sciences, Faculty of Biosciences, Norwegian University of Life Sciences (NMBU), Ås, Norway
| | - Gražina Statkevičiūtė
- Laboratory of Genetics and Physiology, Institute of Agriculture, Lithuanian Research Centre for Agriculture and Forestry, Akademija, Lithuania
| | - Cecilia Sarmiento
- Department of Chemistry and Biotechnology, Tallinn University of Technology, Tallinn, Estonia
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7
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Wang M, Cheong KL. Preparation, Structural Characterisation, and Bioactivities of Fructans: A Review. Molecules 2023; 28:molecules28041613. [PMID: 36838601 PMCID: PMC9967297 DOI: 10.3390/molecules28041613] [Citation(s) in RCA: 15] [Impact Index Per Article: 15.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/23/2023] [Revised: 02/03/2023] [Accepted: 02/06/2023] [Indexed: 02/11/2023] Open
Abstract
Polysaccharides are important components of higher plants and have attracted increasing attention due to their many nutraceutical benefits in humans. Fructans, heterogeneous fructose polymers that serve as storage carbohydrates in various plants, represent one of the most important types of natural polysaccharides. Fructans have various physiological and therapeutic effects, which are beneficial to health, and have the ability to prevent or treat various diseases, allowing their wide use in the food, nutraceutical, and pharmaceutical industries. This article reviews the occurrence, metabolism, preparation, characterisation, analysis, and bioactivity of fructans. Further, their molecular weight, monosaccharide composition, linkages, and structural determination are described. Taken together, this review provides a theoretical foundation for further research into the structure-function relationships of fructans, as well as valuable new information and directions for further research and application of fructans in functional foods.
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Affiliation(s)
- Min Wang
- Guangdong Provincial Key Laboratory of Aquatic Product Processing and Safety, Guangdong Province Engineering Laboratory for Marine Biological Products, Guangdong Provincial Engineering Technology Research Center of Seafood, Guangdong Provincial Science and Technology Innovation Center for Subtropical Fruit and Vegetable Processing, College of Food Science and Technology, Guangdong Ocean University, Zhanjiang 524088, China
- Postgraduate College, Guangdong Ocean University, Zhanjiang 524088, China
| | - Kit-Leong Cheong
- Guangdong Provincial Key Laboratory of Aquatic Product Processing and Safety, Guangdong Province Engineering Laboratory for Marine Biological Products, Guangdong Provincial Engineering Technology Research Center of Seafood, Guangdong Provincial Science and Technology Innovation Center for Subtropical Fruit and Vegetable Processing, College of Food Science and Technology, Guangdong Ocean University, Zhanjiang 524088, China
- Correspondence:
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8
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Han X, Yao F, Xue TT, Wang ZL, Wang Y, Cao X, Hui M, Wu D, Li YH, Wang H, Li H. Sprayed biodegradable liquid film improved the freezing tolerance of cv. Cabernet Sauvignon by up-regulating soluble protein and carbohydrate levels and alleviating oxidative damage. FRONTIERS IN PLANT SCIENCE 2022; 13:1021483. [PMID: 36388526 PMCID: PMC9663820 DOI: 10.3389/fpls.2022.1021483] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/17/2022] [Accepted: 10/12/2022] [Indexed: 06/16/2023]
Abstract
Most cultivars of Vitis vinifera L. are very sensitive to cold. As an exogenous protectant, Biodegradable Liquid Film (BLF) is considered to protect winegrapes from low temperatures and dry winds for safe overwintering. This study aimed to reveal the physiological and biochemical mechanisms of BLF regulating the freezing tolerance of wine grapes. Groups of ten-year-old vines (Cabernet Sauvignon) were sprayed with BLF in November 2020 and 2021, or left untreated as a control treatment, and field plant mortality after overwintering were investigated. Branch samples were collected monthly for determination of biochemical indicators. Dormant two-year-old cuttings (Cabernet Sauvignon) were also used for the determination of relative expression levels of key genes. The results showed that the application of BLF reduced the branch semi-lethal temperature in January and February samples compared with control, and reduced the mortality of above-ground parts, branches and buds. The physiological status of shoots was greatly affected by the climatic conditions of the year, but BLF treatment increased the levels of soluble protein and soluble sugar, and also decreased the content of superoxide anion and malondialdehyde at most sampling times. Correlation analysis showed that the differences in freezing tolerance between BLF and no treated overwintering(CK) vines were mainly related to peroxidase activity, soluble sugar, reducing sugar and starch content. Low temperature stress activated the over expression of ICE1, CBF1, and CBF3, especially for 12h. BLF treatment significantly increased the expression levels of CBF1 and CBF3 under low temperature stress. Overall, these results demonstrate that BLF treatment protects vines from freezing damage by upregulating osmo-regulatory substances and alleviating oxidative damage.
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Affiliation(s)
- Xing Han
- College of Enology, Northwest A & F University, Yangling, China
| | - Fei Yao
- College of Enology, Northwest A & F University, Yangling, China
| | | | - Zhi-lei Wang
- College of Enology, Northwest A & F University, Yangling, China
| | - Ying Wang
- College of Enology, Northwest A & F University, Yangling, China
| | - Xiao Cao
- College of Enology, Northwest A & F University, Yangling, China
| | - Miao Hui
- College of Enology, Northwest A & F University, Yangling, China
| | - Dong Wu
- College of Enology, Northwest A & F University, Yangling, China
| | - Yi-han Li
- College of Enology, Northwest A & F University, Yangling, China
| | - Hua Wang
- College of Enology, Northwest A & F University, Yangling, China
- China Wine Industry Technology Institute, Yinchuan, China
- Shaanxi Engineering Research Center for Viti-Viniculture, Yangling, China
- Engineering Research Center for Viti-Viniculture, National Forestry and Grassland Administration, Yangling, China
| | - Hua Li
- College of Enology, Northwest A & F University, Yangling, China
- China Wine Industry Technology Institute, Yinchuan, China
- Shaanxi Engineering Research Center for Viti-Viniculture, Yangling, China
- Engineering Research Center for Viti-Viniculture, National Forestry and Grassland Administration, Yangling, China
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9
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Márquez-López RE, Loyola-Vargas VM, Santiago-García PA. Interaction between fructan metabolism and plant growth regulators. PLANTA 2022; 255:49. [PMID: 35084581 DOI: 10.1007/s00425-022-03826-1] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/15/2021] [Accepted: 01/08/2022] [Indexed: 06/14/2023]
Abstract
The relationship of fructan to plant growth regulators is clearly more complicated than it looks and is likely related to differences between fructan molecules in size and structure as well as localization. Fructans are a complex group of carbohydrates composed mainly of fructose units linked to a sucrose molecule. Fructans are present in plants as heterogeneous mixtures with diverse molecular structures and mass, different polymerization degrees, and linkage types between fructosyl residues. Like sucrose, they are frequently stored in leaves and other organs, acting as carbohydrate reserves. Fructans are synthesized in the cell vacuole by fructosyltransferase enzymes and catabolized by fructan exohydrolase enzymes. Several publications have shown that fructan metabolism varies with the stage of plant development and in response to the environment. Recent studies have shown a correlation between plant growth regulators (PGR), fructan metabolism, and tolerance to drought and cold. PGR are compounds that profoundly influence the growth and differentiation of plant cells, tissues, and organs. They play a fundamental role in regulating plant responses to developmental and environmental signals. In this review, we summarize the most up-to-date knowledge on the metabolism of fructans and their crosstalk with PGR signaling pathways. We identify areas that require more research to complete our understanding of the role of fructans in plants.
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Affiliation(s)
- Ruth E Márquez-López
- Instituto Politécnico Nacional, Centro Interdisciplinario de Investigación Para el Desarrollo Integral Regional - Unidad Oaxaca, C.P. 71230, Santa Cruz Xoxocotlán, Oaxaca, Mexico
| | - Víctor M Loyola-Vargas
- Unidad de Bioquímica y Biología Molecular de Plantas, Centro de Investigación Científica de Yucatán, Calle 43, No. 130, Col. Chuburná de Hidalgo, C.P. 97205, Mérida, Yucatán, Mexico
| | - Patricia Araceli Santiago-García
- Instituto Politécnico Nacional, Centro Interdisciplinario de Investigación Para el Desarrollo Integral Regional - Unidad Oaxaca, C.P. 71230, Santa Cruz Xoxocotlán, Oaxaca, Mexico.
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10
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Wu S, Greiner S, Ma C, Zhong J, Huang X, Rausch T, Zhao H. A Fructan Exohydrolase from Maize Degrades Both Inulin and Levan and Co-Exists with 1-Kestotriose in Maize. Int J Mol Sci 2021; 22:5149. [PMID: 34068004 PMCID: PMC8152283 DOI: 10.3390/ijms22105149] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/12/2021] [Revised: 04/24/2021] [Accepted: 04/27/2021] [Indexed: 12/03/2022] Open
Abstract
Enzymes with fructan exohydrolase (FEH) activity are present not only in fructan-synthesizing species but also in non-fructan plants. This has led to speculation about their functions in non-fructan species. Here, a cell wall invertase-related Zm-6&1-FEH2 with no "classical" invertase motif was identified in maize. Following heterologous expression in Pichia pastoris and in Nicotiana benthamiana leaves, the enzyme activity of recombinant Zm-6&1-FEH2 displays substrate specificity with respect to inulin and levan. Subcellular localization showed Zm-6&1-FEH2 exclusively localized in the apoplast, and its expression profile was strongly dependent on plant development and in response to drought and abscisic acid. Furthermore, formation of 1-kestotriose, an oligofructan, was detected in vivo and in vitro and could be hydrolyzed by Zm-6&1-FEH2. In summary, these results support that Zm-6&1-FEH2 enzyme from maize can degrade both inulin-type and levan-type fructans, and the implications of the co-existence of Zm-6&1-FEH2 and 1-kestotriose are discussed.
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Affiliation(s)
- Silin Wu
- Key Laboratory of Biology and Genetic Improvement of Horticultural Crops, College of Horticulture, South China Agricultural University, Ministry of Agriculture and Rural Affairs, Guangzhou 510642, China; (S.W.); (X.H.)
| | - Steffen Greiner
- Centre for Organismal Studies Heidelberg, Department of Plant Molecular Physiology, University of Heidelberg, 69120 Heidelberg, Germany; (S.G.); (J.Z.); (T.R.)
| | - Chongjian Ma
- Department of Horticulture, Henry Fok College of Biology and Agricultural Science, Shaoguan University, Shaoguan 512005, China;
| | - Jiaxin Zhong
- Centre for Organismal Studies Heidelberg, Department of Plant Molecular Physiology, University of Heidelberg, 69120 Heidelberg, Germany; (S.G.); (J.Z.); (T.R.)
| | - Xiaojia Huang
- Key Laboratory of Biology and Genetic Improvement of Horticultural Crops, College of Horticulture, South China Agricultural University, Ministry of Agriculture and Rural Affairs, Guangzhou 510642, China; (S.W.); (X.H.)
| | - Thomas Rausch
- Centre for Organismal Studies Heidelberg, Department of Plant Molecular Physiology, University of Heidelberg, 69120 Heidelberg, Germany; (S.G.); (J.Z.); (T.R.)
| | - Hongbo Zhao
- Key Laboratory of Biology and Genetic Improvement of Horticultural Crops, College of Horticulture, South China Agricultural University, Ministry of Agriculture and Rural Affairs, Guangzhou 510642, China; (S.W.); (X.H.)
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11
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Patchett A, Newman JA. Comparison of Plant Metabolites in Root Exudates of Lolium perenne Infected with Different Strains of the Fungal Endophyte Epichloë festucae var. lolii. J Fungi (Basel) 2021; 7:jof7020148. [PMID: 33670493 PMCID: PMC7922862 DOI: 10.3390/jof7020148] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/16/2021] [Revised: 02/07/2021] [Accepted: 02/09/2021] [Indexed: 11/16/2022] Open
Abstract
Lolium perenne infected with the fungal endophyte Epichloë festucae var. lolii have specific, endophyte strain-dependent, chemical phenotypes in their above-ground tissues. Differences in these chemical phenotypes have been largely associated with classes of fungal-derived alkaloids which protect the plant against many insect pests. However, the use of new methodologies, such as various omic techniques, has demonstrated that many other chemical changes occur in both primary and secondary metabolites. Few studies have investigated changes in plant metabolites exiting the plant in the form of root exudates. As root exudates play an essential role in the acquisition of nutrients, microbial associations, and defense in the below-ground environment, it is of interest to understand how plant root exudate chemistry is influenced by the presence of strains of a fungal endophyte. In this study, we tested the influence of four strains of E. festucae var. lolii (E+ (also known as Lp19), AR1, AR37, NEA2), and uninfected controls (E-), on L. perenne growth and the composition of root exudate metabolites. Root exudates present in the hydroponic water were assessed by untargeted metabolomics using Accurate-Mass Quadrupole Time-of-Flight (Q-TOF) liquid chromatography-mass spectrometry (LC-MS). The NEA2 endophyte strain resulted in the greatest plant biomass and the lowest endophyte concentration. We found 84 metabolites that were differentially expressed in at least one of the endophyte treatments compared to E- plants. Two compounds were strongly associated with one endophyte treatment, one in AR37 (m/z 135.0546 RT 1.17), and one in E+ (m/z 517.1987 RT 9.26). These results provide evidence for important changes in L. perenne physiology in the presence of different fungal endophyte strains. Further research should aim to connect changes in root exudate chemical composition with soil ecosystem processes.
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Affiliation(s)
- Aurora Patchett
- Department of Earth Sciences, University of Gothenburg, 405 30 Gothenburg, Sweden;
| | - Jonathan A. Newman
- Department of Biology, Wilfrid Laurier University, Waterloo, ON N2L 3C5, Canada
- Correspondence:
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Transcriptome Sequencing Analysis of Birch (Betula platyphylla Sukaczev) under Low-Temperature Stress. FORESTS 2020. [DOI: 10.3390/f11090970] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Abstract
Low temperature is one of the common abiotic stresses that adversely affect the growth and development of plants. In this study, we used RNA-Seq to identify low-temperature-responsive genes in birch and further analyzed the underlying molecular mechanism. Birch seedlings were treated by the low temperature (6 °C) for 0, 1, 1.5, 2, 2.5, and 3 h, respectively. A total of 3491 genes were differentially expressed after low-temperature stress. Gene Ontology (GO) and Kyoto Encyclopedia of Gene and Genomes (KEGG) functional enrichment analysis were performed for the differentially expressed genes (DEGs). GO analysis indicated that 3491 DEGs were distributed into 1002 categories, and these DEGs were enriched in “cell process”, “metabolic process”, and “stimulus response”, under the “biological process” category; in “organelles” and “cell components”, under the “cell component” category; and in “catalytic activity” and “adhesion”, under the “molecular function” category. The KEGG enrichment indicated that 119 DEGs were involved in Ca2+ and plant hormone signal transduction; 205 DEGs were involved in secondary metabolic processes, such as lipid metabolism and phenylpropanoid biosynthesis pathway; and 20 DEGs were involved in photosynthesis. In addition, a total of 362 transcription factors (TFs) were differentially expressed under low-temperature stress, including AP2/ERF, C2H2, MYB-HB-like, WRKY, bHLH, WD40-like, and GRAS families. Gene Bpev01.c0480.g0081 (calmodulin-like CML38), Bpev01.c1074.g0005 (calmodulin-like CML25), Bpev01.c1074.g0001 (Calcium-binding EF-hand family protein), Bpev01.c2029.g0005 (calmodulin-like protein), Bpev01.c0154.g0008 (POD), Bpev01.c0015.g0143 (N-acetyl-1-glutamate synthase), and Bpev01.c0148.g0010 (branched chain amino acid transferase) were up-regulated at a high level, under low-temperature stress.
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Witzel K, Matros A. Fructans Are Differentially Distributed in Root Tissues of Asparagus. Cells 2020; 9:E1943. [PMID: 32842694 PMCID: PMC7565981 DOI: 10.3390/cells9091943] [Citation(s) in RCA: 18] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/07/2020] [Revised: 08/12/2020] [Accepted: 08/21/2020] [Indexed: 12/23/2022] Open
Abstract
Inulin- and neoseries-type fructans [fructooligosaccharides (FOS) and fructopolysaccharides] accumulate in storage roots of asparagus (Asparagus officinalis L.), which continue to grow throughout the lifespan of this perennial plant. However, little is known about the storage of fructans at the spatial level in planta, and the degree of control by the plant is largely uncertain. We have utilized mass spectrometry imaging (MSI) to resolve FOS distribution patterns in asparagus roots (inner, middle, and outer tissues). Fructan and proteome profiling were further applied to validate the differential abundance of various fructan structures and to correlate observed tissue-specific metabolite patterns with the abundance of related fructan biosynthesis enzymes. Our data revealed an increased abundance of FOS with higher degree of polymerization (DP > 5) and of fructopolysaccharides (DP11 to DP17) towards the inner root tissues. Three isoforms of fructan:fructan 6G-fructosyltransferase (6G-FFT), forming 6G-kestose with a β (2-6) linkage using sucrose as receptor and 1-kestose as donor, were similarly detected in all three root tissues. In contrast, one ß-fructofuranosidase, which likely exhibits fructan:fructan 1-fructosyltransferase (1-FFT) activity, showed very high abundance in the inner tissues and lower levels in the outer tissues. We concluded a tight induction of the biosynthesis of fructans with DP > 5, following a gradient from the outer root cortex to the inner vascular tissues, which also correlates with high levels of sucrose metabolism in inner tissues, observed in our study.
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Affiliation(s)
- Katja Witzel
- Leibniz Institute of Vegetable and Ornamental Crops, Großbeeren, 14979 Brandenburg, Germany;
| | - Andrea Matros
- ARC Centre of Excellence in Plant Energy Biology, Food and Wine, School of Agriculture, University of Adelaide, Urrbrae, SA 5064, Australia
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Dong W, Ma X, Jiang H, Zhao C, Ma H. Physiological and transcriptome analysis of Poa pratensis var. anceps cv. Qinghai in response to cold stress. BMC PLANT BIOLOGY 2020; 20:362. [PMID: 32736517 PMCID: PMC7393922 DOI: 10.1186/s12870-020-02559-1] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/28/2020] [Accepted: 07/19/2020] [Indexed: 05/03/2023]
Abstract
BACKGROUND Low temperature limits the growth and development and geographical distribution of plants. Poa pratensis is a cool-season turfgrass mainly grown in urban areas. However, low winter temperature or cold events in spring and autumn may cause P.pratensis mortality, affecting the appearance of lawns. P.pratensis var. anceps cv. Qinghai (PQ) is widely distributed in the Qinghai-Tibet Plateau above 3000 m. PQ has greater cold tolerance than the commercially cultivated P.pratensis varieties. However, existing studies on the response mechanism of PQ to low temperatures have mainly focused on physiological and biochemical perspectives, while changes in the PQ transcriptome during the response to cold stress have not been reported. RESULTS To investigate the molecular mechanism of the PQ cold response and identify genes to improve the low-temperature tolerance of P.pratensis, we analyzed and compared the transcriptomes of PQ and the cold-sensitive P.pratensis cv. 'Baron' (PB) under cold stress using RNA sequencing. We identified 5996 and 3285 differentially expressed genes (DEGs) between the treatment vs control comparison of PQ and PB, respectively, with 5612 DEGs specific to PQ. Based on the DEGs, important Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways, such as "starch and sucrose metabolism", "protein processing in endoplasmic reticulum", "phenylalanine metabolism" and "glycolysis/gluconeogenesis" were significantly enriched in PQ, and "starch and sucrose metabolism", "phenylpropanoid biosynthesis", "galactose metabolism" and "glutathione metabolism" were significantly enriched in PB. In addition, the "glycolysis" and "citrate cycle (TCA cycle)" pathways were identified as involved in cold tolerance of P.pratensis. CONCLUSIONS As we know, this is the first study to explore the transcriptome of P.pratensis var. anceps cv. Qinghai. Our study not noly provides important insights into the molecular mechanisms of P.pratensis var. anceps cv. Qinghai responds to cold stress, but also systematically reveals the changes of key genes and products of glycolysis and TCA cycle in response to cold stress, which is conductive to the breeding of cold-tolerance P.pratensis genotype.
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Affiliation(s)
- Wenke Dong
- Key Laboratory of Grassland Ecosystem of Ministry of Education, College of Grassland Science, Gansu Agricultural University, Lanzhou, 730070, China
| | - Xiang Ma
- Key Laboratory of Superior Forage Germplasm in the Qinghai-Tibetan Plateau, Qinghai Academy of Animal Science and Veterinary Medicine, Xining, 810016, China
| | - Hanyu Jiang
- Department of Physic, Nanjing Normal University, Nanjing, 210097, China
| | - Chunxu Zhao
- Key Laboratory of Grassland Ecosystem of Ministry of Education, College of Grassland Science, Gansu Agricultural University, Lanzhou, 730070, China
| | - Huiling Ma
- Key Laboratory of Grassland Ecosystem of Ministry of Education, College of Grassland Science, Gansu Agricultural University, Lanzhou, 730070, China.
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Barros KA, Esteves-Ferreira AA, Inaba M, Meally H, Finnan J, Barth S, Davis SJ, Sulpice R. Diurnal patterns of growth and transient reserves of sink and source tissues are affected by cold nights in barley. PLANT, CELL & ENVIRONMENT 2020; 43:1404-1420. [PMID: 32012288 DOI: 10.1111/pce.13735] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/04/2019] [Revised: 12/18/2019] [Accepted: 01/25/2020] [Indexed: 06/10/2023]
Abstract
Barley is described to mostly use sucrose for night carbon requirements. To understand how the transient carbon is accumulated and utilized in response to cold, barley plants were grown in a combination of cold days and/or nights. Both daytime and night cold reduced growth. Sucrose was the main carbohydrate supplying growth at night, representing 50-60% of the carbon consumed. Under warm days and nights, starch was the second contributor with 26% and malate the third with 15%. Under cold nights, the contribution of starch was severely reduced, due to an inhibition of its synthesis, including under warm days, and malate was the second contributor to C requirements with 24-28% of the total amount of carbon consumed. We propose that malate plays a critical role as an alternative carbon source to sucrose and starch in barley. Hexoses, malate, and sucrose mobilization and starch accumulation were affected in barley elf3 clock mutants, suggesting a clock regulation of their metabolism, without affecting growth and photosynthesis however. Altogether, our data suggest that the mobilization of sucrose and malate and/or barley growth machinery are sensitive to cold.
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Affiliation(s)
- Kallyne A Barros
- Plant Systems Biology Lab, School of Natural Sciences, Ryan Institute, National University of Ireland, Galway H91 TK33, Ireland
| | - Alberto A Esteves-Ferreira
- Plant Systems Biology Lab, School of Natural Sciences, Ryan Institute, National University of Ireland, Galway H91 TK33, Ireland
| | - Masami Inaba
- Plant Systems Biology Lab, School of Natural Sciences, Ryan Institute, National University of Ireland, Galway H91 TK33, Ireland
| | - Helena Meally
- Crop Science Department, Teagasc, Carlow R93 XE12, Ireland
| | - John Finnan
- Crop Science Department, Teagasc, Carlow R93 XE12, Ireland
| | - Susanne Barth
- Crop Science Department, Teagasc, Carlow R93 XE12, Ireland
| | - Seth J Davis
- Department of Biology Heslington, University of York, York YO10 5NG, UK
- State Key Laboratory of Crop Stress Biology, School of Life Sciences, Henan University, Kaifeng, China
| | - Ronan Sulpice
- Plant Systems Biology Lab, School of Natural Sciences, Ryan Institute, National University of Ireland, Galway H91 TK33, Ireland
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Volaire F, Morvan-Bertrand A, Prud’homme MP, Benot ML, Augusti A, Zwicke M, Roy J, Landais D, Picon-Cochard C. The resilience of perennial grasses under two climate scenarios is correlated with carbohydrate metabolism in meristems. JOURNAL OF EXPERIMENTAL BOTANY 2020; 71:370-385. [PMID: 31557303 PMCID: PMC6913708 DOI: 10.1093/jxb/erz424] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/09/2019] [Accepted: 09/10/2019] [Indexed: 05/30/2023]
Abstract
Extreme climatic events (ECEs) such as droughts and heat waves affect ecosystem functioning and species turnover. This study investigated the effect of elevated CO2 on species' resilience to ECEs. Monoliths of intact soil and their plant communities from an upland grassland were exposed to 2050 climate scenarios with or without an ECE under ambient (390 ppm) or elevated (520 ppm) CO2. Ecophysiological traits of two perennial grasses (Dactylis glomerata and Holcus lanatus) were measured before, during, and after ECE. At similar soil water content, leaf elongation was greater under elevated CO2 for both species. The resilience of D. glomerata increased under enhanced CO2 (+60%) whereas H. lanatus mostly died during ECE. D. glomerata accumulated 30% more fructans, which were more highly polymerized, and 4-fold less sucrose than H. lanatus. The fructan concentration in leaf meristems was significantly increased under elevated CO2. Their relative abundance changed during the ECE, resulting in a more polymerized assemblage in H. lanatus and a more depolymerized assemblage in D. glomerata. The ratio of low degree of polymerization fructans to sucrose in leaf meristems was the best predictor of resilience across species. This study underlines the role of carbohydrate metabolism and the species-dependent effect of elevated CO2 on the resilience of grasses to ECE.
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Affiliation(s)
| | | | | | - Marie-Lise Benot
- UCA, INRA, VetAgro Sup, UMR 874, Clermont-Ferrand, France
- INRA and Université de Bordeaux, UMR 1202 BIOGECO33610, Cestas, France
| | - Angela Augusti
- UCA, INRA, VetAgro Sup, UMR 874, Clermont-Ferrand, France
- CNR-Institute of Research on Terrestrial Ecosystems, Porano (TR), Italy
| | - Marine Zwicke
- UCA, INRA, VetAgro Sup, UMR 874, Clermont-Ferrand, France
| | - Jacques Roy
- CNRS, UPS 3248, Ecotron Européen de Montpellier, Montferrier-sur-Lez, France
| | - Damien Landais
- CNRS, UPS 3248, Ecotron Européen de Montpellier, Montferrier-sur-Lez, France
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Deng S, Ma J, Zhang L, Chen F, Sang Z, Jia Z, Ma L. De novo transcriptome sequencing and gene expression profiling of Magnolia wufengensis in response to cold stress. BMC PLANT BIOLOGY 2019; 19:321. [PMID: 31319815 PMCID: PMC6637634 DOI: 10.1186/s12870-019-1933-5] [Citation(s) in RCA: 33] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/25/2019] [Accepted: 07/09/2019] [Indexed: 05/05/2023]
Abstract
BACKGROUND Magnolia wufengensis is a new species of Magnolia L. and has considerable ornamental and economic value due to its unique characteristics. However, because of its characteristic of poor low temperature resistance, M. wufengensis is hardly popularization and application in the north of China. Furthermore, the mechanisms of gene regulation and signaling pathways involved in the cold-stress response remained unclear in this species. In order to solve the above-mentioned problems, we performed de novo transcriptome assembly and compared the gene expression under the natural (25 °C) and cold (4 °C) conditions for M. wufengensis seedlings. RESULTS More than 46 million high-quality clean reads were produced from six samples (RNA was extracted from the leaves) and were used for performing de novo transcriptome assembly. A total of 59,764 non-redundant unigenes with an average length of 899 bp (N50 = 1,110) were generated. Among these unigenes, 31,038 unigenes exhibited significant sequence similarity to known genes, as determined by BLASTx searches (E-value ≤1.0E-05) against the Nr, SwissProt, String, GO, KEGG, and Cluster of COG databases. Based on a comparative transcriptome analysis, 3,910 unigenes were significantly differentially expressed (false discovery rate [FDR] < 0.05 and |log2FC (CT/CK)| ≥ 1) in the cold-treated samples, and 2,616 and 1,294 unigenes were up- and down-regulated by cold stress, respectively. Analysis of the expression patterns of 16 differentially expressed genes (DEGs) by quantitative real-time RT-PCR (qRT-PCR) confirmed the accuracy of the RNA-Seq results. Gene Ontology and KEGG pathway functional enrichment analyses allowed us to better understand these differentially expressed unigenes. The most significant transcriptomic changes observed under cold stress were related to plant hormone and signal transduction pathways, primary and secondary metabolism, and photosynthesis. In addition, 113 transcription factors, including members of the AP2-EREBP, bHLH, WRKY, MYB, NAC, HSF, and bZIP families, were identified as cold responsive. CONCLUSION We generated a genome-wide transcript profile of M. wufengensis and a de novo-assembled transcriptome that can be used to analyze genes involved in biological processes. In this study, we provide the first report of transcriptome sequencing of cold-stressed M. wufengensis. Our findings provide important clues not only for understanding the molecular mechanisms of cold stress in plants but also for introducing cold hardiness into M. wufengensis.
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Affiliation(s)
- Shixin Deng
- Ministry of Education Key Laboratory of Silviculture and Conservation, Forestry College, Beijing Forestry University, Beijing, 100083 People’s Republic of China
| | - Jiang Ma
- Ministry of Education Key Laboratory of Silviculture and Conservation, Forestry College, Beijing Forestry University, Beijing, 100083 People’s Republic of China
| | - Lili Zhang
- School of Landscape Architecture, Beijing Forestry University, Beijing, 100083 People’s Republic of China
| | - Faju Chen
- Biotechnology Research Center, China Three Gorges University, Yichang, Hubei Province 443002 People’s Republic of China
| | - Ziyang Sang
- Forestry Bureau of Wufeng County, Wufeng, Hubei Province 443400 People’s Republic of China
| | - Zhongkui Jia
- Ministry of Education Key Laboratory of Silviculture and Conservation, Forestry College, Beijing Forestry University, Beijing, 100083 People’s Republic of China
| | - Luyi Ma
- Ministry of Education Key Laboratory of Silviculture and Conservation, Forestry College, Beijing Forestry University, Beijing, 100083 People’s Republic of China
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Li M, He X, Hao D, Wu J, Zhao J, Yang Q, Chen X. 6-SFT, a Protein from Leymus mollis, Positively Regulates Salinity Tolerance and Enhances Fructan Levels in Arabidopsis thaliana. Int J Mol Sci 2019; 20:E2691. [PMID: 31159261 PMCID: PMC6600527 DOI: 10.3390/ijms20112691] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/21/2019] [Revised: 05/16/2019] [Accepted: 05/28/2019] [Indexed: 11/26/2022] Open
Abstract
Fructans play vital roles in abiotic stress tolerance in plants. In this study, we isolated the sucrose:6-fructosyltransferase gene, which is involved in the synthesis of fructans, from Leymus mollis by rapid amplification of cDNA ends. The Lm-6-SFT gene was introduced into Arabidopsis thaliana cv. Columbia by Agrobacterium-mediated transformation. The transgenic plants were evaluated under salt stress conditions. The results showed that the expression of Lm-6-SFT was significantly induced by light, abscisic acid (ABA), salicylic acid (SA), and salt treatment in L. mollis plants. Overexpression of Lm-6-SFT in Arabidopsis promoted seed germination and primary root growth during the early vegetative growth stage under salt stress. We also found that the transgenic plants expressing Lm-6-SFT had increased proline and fructan levels. β-Glucuronidase staining and promoter analysis indicated that the promoter of Lm-6-SFT was regulated by light, ABA, and salt stress. Quantitative PCR suggested that overexpression of Lm-6-SFT could improve salt tolerance by interacting with the expression of some salt stress tolerance genes. Thus, we demonstrated that the Lm-6-SFT gene is a candidate gene that potentially confers salt stress tolerance to plants. Our study will aid the elucidation of the regulatory mechanism of 6-SFT genes in herb plants.
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Affiliation(s)
- Mao Li
- College of Agronomy, Northwest A&F University, Yangling 712100, Shaanxi, China.
| | - Xiaolan He
- College of Environment and Life Science, Kaili University, Kaili 556011, GuiZhou, China.
| | - Dongdong Hao
- College of Agronomy, Northwest A&F University, Yangling 712100, Shaanxi, China.
| | - Jun Wu
- College of Agronomy, Northwest A&F University, Yangling 712100, Shaanxi, China.
| | - Jixin Zhao
- College of Agronomy, Northwest A&F University, Yangling 712100, Shaanxi, China.
| | - Qunhui Yang
- College of Agronomy, Northwest A&F University, Yangling 712100, Shaanxi, China.
| | - Xinhong Chen
- College of Agronomy, Northwest A&F University, Yangling 712100, Shaanxi, China.
- Shaanxi Key Laboratory of Genetic Engineering for Plant Breeding, China.
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Tarkowski ŁP, Van de Poel B, Höfte M, Van den Ende W. Sweet Immunity: Inulin Boosts Resistance of Lettuce ( Lactuca sativa) against Grey Mold ( Botrytis cinerea) in an Ethylene-Dependent Manner. Int J Mol Sci 2019; 20:E1052. [PMID: 30823420 PMCID: PMC6429215 DOI: 10.3390/ijms20051052] [Citation(s) in RCA: 39] [Impact Index Per Article: 7.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/12/2019] [Revised: 02/12/2019] [Accepted: 02/22/2019] [Indexed: 11/17/2022] Open
Abstract
The concept of "Sweet Immunity" postulates that sugar metabolism and signaling influence plant immune networks. In this study, we tested the potential of commercially available inulin-type fructans to limit disease symptoms caused by Botrytis cinerea in lettuce. Spraying mature lettuce leaves, with inulin-type fructans derived from burdock or chicory was as effective in reducing grey mold disease symptoms caused by Botrytis cinerea as spraying with oligogalacturonides (OGs). OGs are well-known defense elicitors in several plant species. Spraying with inulin and OGs induced accumulation of hydrogen peroxide and levels further increased upon pathogen infection. Inulin and OGs were no longer able to limit Botrytis infection when plants were treated with the ethylene signaling inhibitor 1-methylcyclopropene (1-MCP), indicating that a functional ethylene signaling pathway is needed for the enhanced defense response. Soluble sugars accumulated in leaves primed with OGs, while 1-MCP treatment had an overall negative effect on the sucrose pool. Accumulation of γ-aminobutyric acid (GABA), a stress-associated non-proteinogenic amino acid and possible signaling compound, was observed in inulin-treated samples after infection and negatively affected by the 1-MCP treatment. We have demonstrated for the first time that commercially available inulin-type fructans and OGs can improve the defensive capacity of lettuce, an economically important species. We discuss our results in the context of a possible recognition of fructans as Damage or Microbe Associated Molecular Patterns.
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Affiliation(s)
- Łukasz Paweł Tarkowski
- Laboratory of Molecular Plant Biology, KU Leuven, Kasteelpark Arenberg 31, 3001 Leuven, Belgium.
| | - Bram Van de Poel
- Laboratory of Molecular Plant Hormone Physiology, Division of Crop Biotechnics, Department of Biosystems, KU Leuven, 3001 Leuven, Belgium.
| | - Monica Höfte
- Laboratory of Phytopathology, Department of Plants and Crops, UGhent, 9000 Ghent, Belgium.
| | - Wim Van den Ende
- Laboratory of Molecular Plant Biology, KU Leuven, Kasteelpark Arenberg 31, 3001 Leuven, Belgium.
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Versluys M, Kirtel O, Toksoy Öner E, Van den Ende W. The fructan syndrome: Evolutionary aspects and common themes among plants and microbes. PLANT, CELL & ENVIRONMENT 2018; 41:16-38. [PMID: 28925070 DOI: 10.1111/pce.13070] [Citation(s) in RCA: 50] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/15/2017] [Revised: 08/30/2017] [Accepted: 09/09/2017] [Indexed: 05/13/2023]
Abstract
Fructans are multifunctional fructose-based water soluble carbohydrates found in all biological kingdoms but not in animals. Most research has focused on plant and microbial fructans and has received a growing interest because of their practical applications. Nevertheless, the origin of fructan production, the so-called "fructan syndrome," is still unknown. Why fructans only occur in a limited number of plant and microbial species remains unclear. In this review, we provide an overview of plant and microbial fructan research with a focus on fructans as an adaptation to the environment and their role in (a)biotic stress tolerance. The taxonomical and biogeographical distribution of fructans in both kingdoms is discussed and linked (where possible) to environmental factors. Overall, the fructan syndrome may be related to water scarcity and differences in physicochemical properties, for instance, water retaining characteristics, at least partially explain why different fructan types with different branching levels are found in different species. Although a close correlation between environmental stresses and fructan production is quite clear in plants, this link seems to be missing in microbes. We hypothesize that this can be at least partially explained by differential evolutionary timeframes for plants and microbes, combined with potential redundancy effects.
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Affiliation(s)
- Maxime Versluys
- Laboratory of Molecular Plant Biology, KU Leuven, Leuven, Belgium
| | - Onur Kirtel
- Industrial Biotechnology and Systems Biology Research Group, Bioengineering Department, Marmara University, Istanbul, 34722, Turkey
| | - Ebru Toksoy Öner
- Industrial Biotechnology and Systems Biology Research Group, Bioengineering Department, Marmara University, Istanbul, 34722, Turkey
| | - Wim Van den Ende
- Laboratory of Molecular Plant Biology, KU Leuven, Leuven, Belgium
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21
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Foito A, Hackett CA, Stewart D, Velmurugan J, Milbourne D, Byrne SL, Barth S. Quantitative trait loci associated with different polar metabolites in perennial ryegrass - providing scope for breeding towards increasing certain polar metabolites. BMC Genet 2017; 18:84. [PMID: 29017444 PMCID: PMC5634963 DOI: 10.1186/s12863-017-0552-0] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/15/2017] [Accepted: 09/21/2017] [Indexed: 01/09/2023] Open
Abstract
Background Recent advances in the mapping of biochemical traits have been reported in Lolium perenne. Although the mapped traits, including individual sugars and fatty acids, contribute greatly towards ruminant productivity, organic acids and amino acids have been largely understudied despite their influence on the ruminal microbiome. Results In this study, we used a targeted gas-chromatography mass spectrometry (GC-MS) approach to profile the levels of 25 polar metabolites from different classes (sugars, amino acids, phenolic acids, organic acids and other nitrogen-containing compounds) present in a L. perenne F2 population consisting of 325 individuals. A quantitative trait (QTL) mapping approach was applied and successfully identified QTLs regulating seven of those polar metabolites (L-serine, L-leucine, glucose, fructose, myo-inositol, citric acid and 2, 3-hydroxypropanoic acid).Two QTL mapping approaches were carried out using SNP markers on about half of the population only and an imputation approach using SNP and DArT markers on the entire population. The imputation approach confirmed the four QTLs found in the SNP-only analysis and identified a further seven QTLs. Conclusions These results highlight the potential of utilising molecular assisted breeding in perennial ryegrass to modulate a range of biochemical quality traits with downstream effects in livestock productivity and ruminal digestion. Electronic supplementary material The online version of this article (10.1186/s12863-017-0552-0) contains supplementary material, which is available to authorized users.
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Affiliation(s)
- Alexandre Foito
- Teagasc, Crops Environment and Land Use Programme, Oak Park Research Centre, Carlow, Ireland.,Enhancing Crop Productivity and Utilisation, The James Hutton Institute, Invergowrie, Dundee, DD2 5DA, UK
| | | | - Derek Stewart
- Enhancing Crop Productivity and Utilisation, The James Hutton Institute, Invergowrie, Dundee, DD2 5DA, UK.,Engineering and Physical Sciences, Heriot-Watt University, Edinburgh, EH14 4AS, UK.,Norwegian Institute of Bioeconomy Research, Pb 115, -1431, Ås, NO, Norway
| | - Janaki Velmurugan
- Teagasc, Crops Environment and Land Use Programme, Oak Park Research Centre, Carlow, Ireland
| | - Dan Milbourne
- Teagasc, Crops Environment and Land Use Programme, Oak Park Research Centre, Carlow, Ireland
| | - Stephen L Byrne
- Teagasc, Crops Environment and Land Use Programme, Oak Park Research Centre, Carlow, Ireland
| | - Susanne Barth
- Teagasc, Crops Environment and Land Use Programme, Oak Park Research Centre, Carlow, Ireland.
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22
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Bredow M, Walker VK. Ice-Binding Proteins in Plants. FRONTIERS IN PLANT SCIENCE 2017; 8:2153. [PMID: 29312400 PMCID: PMC5744647 DOI: 10.3389/fpls.2017.02153] [Citation(s) in RCA: 42] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/29/2017] [Accepted: 12/05/2017] [Indexed: 05/04/2023]
Abstract
Sub-zero temperatures put plants at risk of damage associated with the formation of ice crystals in the apoplast. Some freeze-tolerant plants mitigate this risk by expressing ice-binding proteins (IBPs), that adsorb to ice crystals and modify their growth. IBPs are found across several biological kingdoms, with their ice-binding activity and function uniquely suited to the lifestyle they have evolved to protect, be it in fishes, insects or plants. While IBPs from freeze-avoidant species significantly depress the freezing point, plant IBPs typically have a reduced ability to lower the freezing temperature. Nevertheless, they have a superior ability to inhibit the recrystallization of formed ice. This latter activity prevents ice crystals from growing larger at temperatures close to melting. Attempts to engineer frost-hardy plants by the controlled transfer of IBPs from freeze-avoiding fish and insects have been largely unsuccessful. In contrast, the expression of recombinant IBP sequences from freeze-tolerant plants significantly reduced electrolyte leakage and enhanced freezing survival in freeze-sensitive plants. These promising results have spurred additional investigations into plant IBP localization and post-translational modifications, as well as a re-evaluation of IBPs as part of the anti-stress and anti-pathogen axis of freeze-tolerant plants. Here we present an overview of plant freezing stress and adaptation mechanisms and discuss the potential utility of IBPs for the generation of freeze-tolerant crops.
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Affiliation(s)
- Melissa Bredow
- Department of Biology, Queen’s University, Kingston, ON, Canada
- *Correspondence: Melissa Bredow,
| | - Virginia K. Walker
- Department of Biomedical and Molecular Sciences, and School of Environmental Studies, Queen’s University, Kingston, ON, Canada
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23
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Fu J, Miao Y, Shao L, Hu T, Yang P. De novo transcriptome sequencing and gene expression profiling of Elymus nutans under cold stress. BMC Genomics 2016; 17:870. [PMID: 27814694 PMCID: PMC5097361 DOI: 10.1186/s12864-016-3222-0] [Citation(s) in RCA: 37] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2016] [Accepted: 10/27/2016] [Indexed: 12/25/2022] Open
Abstract
BACKGROUND Elymus nutans Griseb., is an important alpine perennial forage of Pooideae subfamily with strong inherited cold tolerance. To get a deeper insight into its molecular mechanisms of cold tolerance, we compared the transcriptome profiling by RNA-Seq in two genotypes of Elymus nutans Griseb. the tolerant Damxung (DX) and the sensitive Gannan (GN) under cold stress. RESULTS The new E. nutans transcriptomes were assembled and comprised 200,520 and 181,331 transcripts in DX and GN, respectively. Among them, 5436 and 4323 genes were differentially expressed in DX and GN, with 170 genes commonly expressed over time. Early cold responses involved numerous genes encoding transcription factors and signal transduction in both genotypes. The AP2/EREBP famliy of transcription factors was predominantly expressed in both genotypes. The most significant transcriptomic changes in the later phases of cold stress are associated with oxidative stress, primary and secondary metabolism, and photosynthesis. Higher fold expressions of fructan, trehalose, and alpha-linolenic acid metabolism-related genes were detected in DX. The DX-specific dehydrins may be promising candidates to improve cold tolerance. Twenty-six hub genes played a central role in both genotypes under cold stress. qRT-PCR analysis of 26 genes confirmed the RNA-Seq results. CONCLUSIONS The stronger transcriptional differentiation during cold stress in DX explains its better cold tolerance compared to GN. The identified fructan biosynthesis, alpha-linolenic acid metabolism, and DX-specific dehydrin-related genes may provide genetic resources for the improvement of cold-tolerant characters in DX. Our findings provide important clues for further studies of the molecular mechanisms underlying cold stress responses in plants.
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Affiliation(s)
- Juanjuan Fu
- Department of grassland science, College of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi, 712100, China
| | - Yanjun Miao
- College of Plant Science, Agriculture and Animal Husbandry College of Tibet University, Linzhi, Tibet, 860000, China
| | - Linhui Shao
- Institute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing, 100101, China
| | - Tianming Hu
- Department of grassland science, College of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi, 712100, China.
| | - Peizhi Yang
- Department of grassland science, College of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi, 712100, China.
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24
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Zhang J, Dell B, Ma W, Vergauwen R, Zhang X, Oteri T, Foreman A, Laird D, Van den Ende W. Contributions of Root WSC during Grain Filling in Wheat under Drought. FRONTIERS IN PLANT SCIENCE 2016; 7:904. [PMID: 27446134 PMCID: PMC4917532 DOI: 10.3389/fpls.2016.00904] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/09/2016] [Accepted: 06/08/2016] [Indexed: 05/26/2023]
Abstract
As the first organ in plants to sense water-deficit in the soil, roots have important roles for improving crop adaption to water limited environments. Stem water soluble carbohydrates (WSC) are a major carbon source for grain filling under drought conditions. The contributions of root WSC during grain filling under drought has not been revealed. Wheat parental lines of Westonia, Kauz and their derived four double haploid (DH) lines, namely, DH 125, DH 139, DH 307, and DH 338 were used in a field drought experiment with four replications. Through measurements of the root and stem WSC components, and the associated enzyme activities during grain filling, we identified that the levels of root WSC and fructan were one third of the levels in stems. In particular, root glucose and 6-kestose levels were one third of the stem, while the root fructose and bifurcose level were almost half of the stem and sucrose level was two third of the stem. The accumulation and the degradation patterns of root fructan levels were similar to that in the stem, especially under drought. Correlations between root fructan levels and grain assimilation were highly significant, indicating that under terminal drought, root WSC represents a redistributed carbon source for grain filling rather than deep rooting. The significantly higher root sucrose levels under drought suggest that sucrose may act as a signal under drought stress. As compared with stem fructose levels, the earlier increased root fructose levels in DH 307, DH 139, and DH 338 provided agile response to drought stress. Our root results further confirmed that β-(2-6) linkages predominate in wheat with patterns of 6-kestose being closely correlated with overall fructan patterns. Further research will focus on the roles of 6-FEH during fructan remobilization in stems.
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Affiliation(s)
- Jingjuan Zhang
- School of Veterinary and Life Sciences, Murdoch University, MurdochWA, Australia
| | - Bernard Dell
- School of Veterinary and Life Sciences, Murdoch University, MurdochWA, Australia
| | - Wujun Ma
- School of Veterinary and Life Sciences, Murdoch University, MurdochWA, Australia
| | - Rudy Vergauwen
- Laboratory of Molecular Plant Biology, KU LeuvenLeuven, Belgium
| | - Xinmin Zhang
- School of Veterinary and Life Sciences, Murdoch University, MurdochWA, Australia
| | - Tina Oteri
- School of Engineering and Information Technology, Murdoch University, MurdochWA, Australia
| | - Andrew Foreman
- School of Engineering and Information Technology, Murdoch University, MurdochWA, Australia
| | - Damian Laird
- School of Engineering and Information Technology, Murdoch University, MurdochWA, Australia
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Gasperl A, Morvan-Bertrand A, Prud'homme MP, van der Graaff E, Roitsch T. Exogenous Classic Phytohormones Have Limited Regulatory Effects on Fructan and Primary Carbohydrate Metabolism in Perennial Ryegrass (Lolium perenne L.). FRONTIERS IN PLANT SCIENCE 2016; 6:1251. [PMID: 26834764 PMCID: PMC4719101 DOI: 10.3389/fpls.2015.01251] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/08/2015] [Accepted: 12/21/2015] [Indexed: 05/05/2023]
Abstract
Fructans are polymers of fructose and one of the main constituents of water-soluble carbohydrates in forage grasses and cereal crops of temperate climates. Fructans are involved in cold and drought resistance, regrowth following defoliation and early spring growth, seed filling, have beneficial effects on human health and are used for industrial processes. Perennial ryegrass (Lolium perenne L.) serves as model species to study fructan metabolism. Fructan metabolism is under the control of both synthesis by fructosyltransferases (FTs) and breakdown through fructan exohydrolases (FEHs). The accumulation of fructans can be triggered by high sucrose levels and abiotic stress conditions such as drought and cold stress. However, detailed studies on the mechanisms involved in the regulation of fructan metabolism are scarce. Since different phytohormones, especially abscisic acid (ABA), are known to play an important role in abiotic stress responses, the possible short term regulation of the enzymes involved in fructan metabolism by the five classical phytohormones was investigated. Therefore, the activities of enzymes involved in fructan synthesis and breakdown, the expression levels for the corresponding genes and levels for water-soluble carbohydrates were determined following pulse treatments with ABA, auxin (AUX), ethylene (ET), gibberellic acid (GA), or kinetin (KIN). The most pronounced fast effects were a transient increase of FT activities by AUX, KIN, ABA, and ET, while minor effects were evident for 1-FEH activity with an increased activity in response to KIN and a decrease by GA. Fructan and sucrose levels were not affected. This observed discrepancy demonstrates the importance of determining enzyme activities to obtain insight into the physiological traits and ultimately the plant phenotype. The comparative analyses of activities for seven key enzymes of primary carbohydrate metabolism revealed no co-regulation between enzymes of the fructan and sucrose pool.
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Affiliation(s)
- Anna Gasperl
- Institute of Plant Sciences, Karl-Franzens-Universität GrazGraz, Austria
| | - Annette Morvan-Bertrand
- Normandie UniversitéCaen, France
- UMR 950 Ecophysiologie Végétale, Agronomie et Nutritions NCS, Université de Caen NormandieCaen, France
- INRA, UMR 950 Ecophysiologie Végétale, Agronomie et Nutritions NCSCaen, France
| | - Marie-Pascale Prud'homme
- Normandie UniversitéCaen, France
- UMR 950 Ecophysiologie Végétale, Agronomie et Nutritions NCS, Université de Caen NormandieCaen, France
- INRA, UMR 950 Ecophysiologie Végétale, Agronomie et Nutritions NCSCaen, France
| | | | - Thomas Roitsch
- Institute of Plant Sciences, Karl-Franzens-Universität GrazGraz, Austria
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Levanase from Bacillus subtilis hydrolyses β-2,6 fructosyl bonds in bacterial levans and in grass fructans. Int J Biol Macromol 2016; 85:514-21. [PMID: 26773563 DOI: 10.1016/j.ijbiomac.2016.01.008] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/14/2015] [Revised: 12/22/2015] [Accepted: 01/02/2016] [Indexed: 01/01/2023]
Abstract
A Levanase, LevB, from Bacillus subtilis 168, was expressed as a His6-tagged protein in Escherichia coli. The enzyme was purified and characterised for its activity and substrate specificity. LevB has a pH optimum of 6.0-6.5 and a maximum observed specific activity of 3 U mg(-1) using levan from Erwinia herbicola as substrate. Hydrolysis products were analysed by HPAEC, TLC, and NMR using chicory root inulin, mixed linkage fructans purified from ryegrass (Lolium perenne) and levan from E. herbicola as substrates. This revealed that LevB is an endolevanase that selectively cleaves the (β-2,6) fructosyl bonds and does not hydrolyse inulin. Ryegrass fructans and bacterial levan was hydrolysed partially releasing oligosaccharides, but together with exoinulinase, LevB hydrolysed both ryegrass fructans and bacterial levan to near completion. We suggest that LevB can be used as a tool to achieve more structural information on complex fructans and to achieve complete degradation and quantification of mixed linkage fructans.
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27
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Abeynayake SW, Byrne S, Nagy I, Jonavičienė K, Etzerodt TP, Boelt B, Asp T. Changes in Lolium perenne transcriptome during cold acclimation in two genotypes adapted to different climatic conditions. BMC PLANT BIOLOGY 2015; 15:250. [PMID: 26474965 PMCID: PMC4609083 DOI: 10.1186/s12870-015-0643-x] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/02/2015] [Accepted: 10/12/2015] [Indexed: 05/20/2023]
Abstract
BACKGROUND Activation of numerous protective mechanisms during cold acclimation is important for the acquisition of freezing tolerance in perennial ryegrass (Lolium perenne L.). To elucidate the molecular mechanisms of cold acclimation in two genotypes ('Veyo' and 'Falster') of perennial ryegrass from distinct geographical origins, we performed transcriptome profiling during cold acclimation using RNA-Seq. METHODS We cold-acclimated plants from both genotypes in controlled conditions for a period of 17 days and isolated Total RNA at various time points for high throughput sequencing using Illumina technology. RNA-seq reads were aligned to genotype specific references to identify transcripts with significant changes in expression during cold acclimation. RESULTS The genes induced were involved in protective mechanisms such as cell response to abiotic stimulus, signal transduction, redox homeostasis, plasma membrane and cell wall modifications, and carbohydrate metabolism in both genotypes. 'Falster' genotype, adapted to cold climates, showed a stronger transcriptional differentiation during cold acclimation, and more differentially expressed transcripts related to stress, signal transduction, response to abiotic stimulus, and metabolic processes compared to 'Veyo'. 'Falster' genotype also showed an induction of more transcripts with sequence homology to fructosyltransferase genes (FTs) and a higher fold induction of fructan in response to low-temperature stress. The circadian rhythm network was perturbed in the 'Veyo' genotype adapted to warmer climates. CONCLUSION In this study, the differentially expressed genes during cold acclimation, potentially involved in numerous protective mechanisms, were identified in two genotypes of perennial ryegrass from distinct geographical origins. The observation that the circadian rhythm network was perturbed in 'Veyo' during cold acclimation may point to a low adaptability of 'Veyo' to low temperature stresses. This study also revealed the transcriptional mechanisms underlying carbon allocation towards fructan biosynthesis in perennial ryegrass.
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Affiliation(s)
- Shamila Weerakoon Abeynayake
- Department of Agroecology - Crop Health, Aarhus University, Slagelse, Denmark.
- Department of Molecular Biology and Genetics, Science and Technology, Aarhus University, Slagelse, Denmark.
| | - Stephen Byrne
- Department of Molecular Biology and Genetics, Science and Technology, Aarhus University, Slagelse, Denmark.
| | - Istvan Nagy
- Department of Molecular Biology and Genetics, Science and Technology, Aarhus University, Slagelse, Denmark.
| | - Kristina Jonavičienė
- Laboratory of Genetics and Physiology, Institute of Agriculture, Lithuanian Research Centre for Agriculture and Forestry, Kėdainiai distr, Lithuania.
| | | | - Birte Boelt
- Department of Agroecology - Crop Health, Aarhus University, Slagelse, Denmark.
| | - Torben Asp
- Department of Molecular Biology and Genetics, Science and Technology, Aarhus University, Slagelse, Denmark.
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