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For: De-la-Peña C, Nic-Can GI, Galaz-Ávalos RM, Avilez-Montalvo R, Loyola-Vargas VM. The role of chromatin modifications in somatic embryogenesis in plants. Front Plant Sci 2015;6:635. [PMID: 26347757 PMCID: PMC4539545 DOI: 10.3389/fpls.2015.00635] [Citation(s) in RCA: 35] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/13/2015] [Accepted: 07/31/2015] [Indexed: 05/20/2023]
Number Cited by Other Article(s)
1
Wójcikowska B, Chwiałkowska K, Nowak K, Citerne S, Morończyk J, Wójcik AM, Kiwior-Wesołowska A, Francikowski J, Kwaśniewski M, Gaj MD. Transcriptomic profiling reveals histone acetylation-regulated genes involved in somatic embryogenesis in Arabidopsis thaliana. BMC Genomics 2024;25:788. [PMID: 39148037 PMCID: PMC11325840 DOI: 10.1186/s12864-024-10623-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/18/2024] [Accepted: 07/15/2024] [Indexed: 08/17/2024]  Open
2
Ramakrishnan M, Zhou M, Ceasar SA, Ali DJ, Maharajan T, Vinod KK, Sharma A, Ahmad Z, Wei Q. Epigenetic modifications and miRNAs determine the transition of somatic cells into somatic embryos. PLANT CELL REPORTS 2023;42:1845-1873. [PMID: 37792027 DOI: 10.1007/s00299-023-03071-0] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/02/2023] [Accepted: 09/13/2023] [Indexed: 10/05/2023]
3
Lepri A, Longo C, Messore A, Kazmi H, Madia VN, Di Santo R, Costi R, Vittorioso P. Plants and Small Molecules: An Up-and-Coming Synergy. PLANTS (BASEL, SWITZERLAND) 2023;12:1729. [PMID: 37111951 PMCID: PMC10145415 DOI: 10.3390/plants12081729] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 04/07/2023] [Revised: 04/16/2023] [Accepted: 04/18/2023] [Indexed: 06/19/2023]
4
Jiang K, Guo H, Zhai J. Interplay of phytohormones and epigenetic regulation: A recipe for plant development and plasticity. JOURNAL OF INTEGRATIVE PLANT BIOLOGY 2023;65:381-398. [PMID: 36223083 DOI: 10.1111/jipb.13384] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/20/2022] [Accepted: 10/10/2022] [Indexed: 06/16/2023]
5
Kang D, Khan MA, Song P, Liu Y, Wu Y, Ai P, Li Z, Wang Z. Comparative analysis of the chrysanthemum transcriptome with DNA methylation inhibitors treatment and silencing MET1 lines. BMC PLANT BIOLOGY 2023;23:47. [PMID: 36670371 PMCID: PMC9862865 DOI: 10.1186/s12870-023-04036-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/28/2022] [Accepted: 01/02/2023] [Indexed: 06/17/2023]
6
Aflaki F, Gutzat R, Mozgová I. Chromatin during plant regeneration: Opening towards root identity? CURRENT OPINION IN PLANT BIOLOGY 2022;69:102265. [PMID: 35988353 DOI: 10.1016/j.pbi.2022.102265] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/12/2022] [Revised: 06/01/2022] [Accepted: 06/28/2022] [Indexed: 06/15/2023]
7
A Comparative Transcriptome Analysis Reveals the Molecular Mechanisms That Underlie Somatic Embryogenesis in Peaonia ostii ‘Fengdan’. Int J Mol Sci 2022;23:ijms231810595. [PMID: 36142512 PMCID: PMC9505998 DOI: 10.3390/ijms231810595] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2022] [Revised: 09/05/2022] [Accepted: 09/08/2022] [Indexed: 11/20/2022]  Open
8
de Araújo Silva-Cardoso IM, Gomes ACMM, Scherwinski-Pereira JE. Cellular responses of oil palm genotypes during somatic embryogenesis involve participation of procambial cells, DNA demethylation, and auxin accumulation. PLANT CELL REPORTS 2022;41:1875-1893. [PMID: 35776139 DOI: 10.1007/s00299-022-02898-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/06/2022] [Accepted: 06/15/2022] [Indexed: 06/15/2023]
9
Yue J, Dong Y, Liu S, Jia Y, Li C, Wang Z, Gong S. Integrated Proteomic and Metabolomic Analyses Provide Insights Into Acquisition of Embryogenic Ability in Agapanthus praecox. FRONTIERS IN PLANT SCIENCE 2022;13:858065. [PMID: 35665191 PMCID: PMC9158531 DOI: 10.3389/fpls.2022.858065] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/19/2022] [Accepted: 04/20/2022] [Indexed: 06/15/2023]
10
Li Y, Zhu S, Yao J, Fang S, Li T, Li B, Wang X, Wang M, Wu L, Pan J, Feng X, Chen W, Zhang Y. Genome-wide Characterization of the JmjC Domain-Containing Histone Demethylase Gene Family Reveals GhJMJ24 and GhJMJ49 Involving in Somatic Embryogenesis Process in Cotton. Front Mol Biosci 2022;9:888983. [PMID: 35573733 PMCID: PMC9091307 DOI: 10.3389/fmolb.2022.888983] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/03/2022] [Accepted: 04/08/2022] [Indexed: 11/16/2022]  Open
11
Joshi S, Paul P, Hartman JM, Perry SE. AGL15 Promotion of Somatic Embryogenesis: Role and Molecular Mechanism. FRONTIERS IN PLANT SCIENCE 2022;13:861556. [PMID: 35419012 PMCID: PMC8996056 DOI: 10.3389/fpls.2022.861556] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/24/2022] [Accepted: 03/01/2022] [Indexed: 06/14/2023]
12
Li M, Wrobel-Marek J, Heidmann I, Horstman A, Chen B, Reis R, Angenent GC, Boutilier K. Auxin biosynthesis maintains embryo identity and growth during BABY BOOM-induced somatic embryogenesis. PLANT PHYSIOLOGY 2022;188:1095-1110. [PMID: 34865162 PMCID: PMC8825264 DOI: 10.1093/plphys/kiab558] [Citation(s) in RCA: 24] [Impact Index Per Article: 12.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/10/2021] [Accepted: 11/03/2021] [Indexed: 05/18/2023]
13
Zhang YC, Zhou YF, Cheng Y, Huang JH, Lian JP, Yang L, He RR, Lei MQ, Liu YW, Yuan C, Zhao WL, Xiao S, Chen YQ. Genome-wide analysis and functional annotation of chromatin-enriched noncoding RNAs in rice during somatic cell regeneration. Genome Biol 2022;23:28. [PMID: 35045887 PMCID: PMC8772118 DOI: 10.1186/s13059-022-02608-y] [Citation(s) in RCA: 12] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/22/2021] [Accepted: 01/12/2022] [Indexed: 12/14/2022]  Open
14
Zhou L, Yarra R, Jin L, Yang Y, Cao H, Zhao Z. Identification and expression analysis of histone modification gene (HM) family during somatic embryogenesis of oil palm. BMC Genomics 2022;23:11. [PMID: 34983381 PMCID: PMC8729141 DOI: 10.1186/s12864-021-08245-2] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/18/2021] [Accepted: 12/07/2021] [Indexed: 11/23/2022]  Open
15
Mujib A, Bansal Y, Malik MQ, Syeed R, Mamgain J, Ejaz B. Internal and External Regulatory Elements Controlling Somatic Embryogenesis in Catharanthus: A Model Medicinal Plant. Methods Mol Biol 2022;2527:11-27. [PMID: 35951180 DOI: 10.1007/978-1-0716-2485-2_2] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/15/2023]
16
Pereira C, Castander-Olarieta A, Sales E, Montalbán IA, Canhoto J, Moncaleán P. Heat Stress in Pinus halepensis Somatic Embryogenesis Induction: Effect in DNA Methylation and Differential Expression of Stress-Related Genes. PLANTS (BASEL, SWITZERLAND) 2021;10:plants10112333. [PMID: 34834696 PMCID: PMC8622292 DOI: 10.3390/plants10112333] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/03/2021] [Revised: 10/25/2021] [Accepted: 10/26/2021] [Indexed: 05/13/2023]
17
Kakoulidou I, Avramidou EV, Baránek M, Brunel-Muguet S, Farrona S, Johannes F, Kaiserli E, Lieberman-Lazarovich M, Martinelli F, Mladenov V, Testillano PS, Vassileva V, Maury S. Epigenetics for Crop Improvement in Times of Global Change. BIOLOGY 2021;10:766. [PMID: 34439998 PMCID: PMC8389687 DOI: 10.3390/biology10080766] [Citation(s) in RCA: 37] [Impact Index Per Article: 12.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/29/2021] [Revised: 08/04/2021] [Accepted: 08/06/2021] [Indexed: 12/15/2022]
18
Mladenov V, Fotopoulos V, Kaiserli E, Karalija E, Maury S, Baranek M, Segal N, Testillano PS, Vassileva V, Pinto G, Nagel M, Hoenicka H, Miladinović D, Gallusci P, Vergata C, Kapazoglou A, Abraham E, Tani E, Gerakari M, Sarri E, Avramidou E, Gašparović M, Martinelli F. Deciphering the Epigenetic Alphabet Involved in Transgenerational Stress Memory in Crops. Int J Mol Sci 2021;22:7118. [PMID: 34281171 PMCID: PMC8268041 DOI: 10.3390/ijms22137118] [Citation(s) in RCA: 27] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/24/2021] [Revised: 06/16/2021] [Accepted: 06/27/2021] [Indexed: 12/11/2022]  Open
19
Histone Deacetylase Inhibitors Increase the Embryogenic Potential and Alter the Expression of Embryogenesis-Related and HDAC-Encoding Genes in Grapevine (Vitis vinifera L., cv. Mencía). PLANTS 2021;10:plants10061164. [PMID: 34201224 PMCID: PMC8228518 DOI: 10.3390/plants10061164] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/15/2021] [Revised: 06/03/2021] [Accepted: 06/04/2021] [Indexed: 01/08/2023]
20
Castander-Olarieta A, Pereira C, Sales E, Meijón M, Arrillaga I, Cañal MJ, Goicoa T, Ugarte MD, Moncaleán P, Montalbán IA. Induction of Radiata Pine Somatic Embryogenesis at High Temperatures Provokes a Long-Term Decrease in DNA Methylation/Hydroxymethylation and Differential Expression of Stress-Related Genes. PLANTS 2020;9:plants9121762. [PMID: 33322106 PMCID: PMC7762990 DOI: 10.3390/plants9121762] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/17/2020] [Revised: 12/08/2020] [Accepted: 12/11/2020] [Indexed: 01/29/2023]
21
Osorio-Montalvo P, De-la-Peña C, Oropeza C, Nic-Can G, Córdova-Lara I, Castillo-Castro E, Sáenz-Carbonell L. A peak in global DNA methylation is a key step to initiate the somatic embryogenesis of coconut palm (Cocos nucifera L). PLANT CELL REPORTS 2020;39:1345-1357. [PMID: 32789543 DOI: 10.1007/s00299-020-02568-2] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/04/2020] [Revised: 06/25/2020] [Accepted: 07/10/2020] [Indexed: 05/08/2023]
22
Olivares-García CA, Mata-Rosas M, Peña-Montes C, Quiroz-Figueroa F, Segura-Cabrera A, Shannon LM, Loyola-Vargas VM, Monribot-Villanueva JL, Elizalde-Contreras JM, Ibarra-Laclette E, Ramirez-Vázquez M, Guerrero-Analco JA, Ruiz-May E. Phenylpropanoids Are Connected to Cell Wall Fortification and Stress Tolerance in Avocado Somatic Embryogenesis. Int J Mol Sci 2020;21:ijms21165679. [PMID: 32784357 PMCID: PMC7460882 DOI: 10.3390/ijms21165679] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2020] [Revised: 08/02/2020] [Accepted: 08/03/2020] [Indexed: 12/13/2022]  Open
23
Guo H, Fan Y, Guo H, Wu J, Yu X, Wei J, Lian X, Zhang L, Gou Z, Fan Y, Zeng F. Somatic embryogenesis critical initiation stage-specific m CHH hypomethylation reveals epigenetic basis underlying embryogenic redifferentiation in cotton. PLANT BIOTECHNOLOGY JOURNAL 2020;18:1648-1650. [PMID: 31925881 PMCID: PMC7336376 DOI: 10.1111/pbi.13336] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/04/2019] [Accepted: 01/07/2020] [Indexed: 05/23/2023]
24
Ibáñez S, Carneros E, Testillano PS, Pérez-Pérez JM. Advances in Plant Regeneration: Shake, Rattle and Roll. PLANTS (BASEL, SWITZERLAND) 2020;9:E897. [PMID: 32708602 PMCID: PMC7412315 DOI: 10.3390/plants9070897] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/25/2020] [Revised: 07/13/2020] [Accepted: 07/14/2020] [Indexed: 01/23/2023]
25
Genes, proteins and other networks regulating somatic embryogenesis in plants. J Genet Eng Biotechnol 2020;18:31. [PMID: 32661633 PMCID: PMC7359197 DOI: 10.1186/s43141-020-00047-5] [Citation(s) in RCA: 26] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2020] [Accepted: 07/01/2020] [Indexed: 11/21/2022]
26
Uc-Chuc MA, Pérez-Hernández C, Galaz-Ávalos RM, Brito-Argaez L, Aguilar-Hernández V, Loyola-Vargas VM. YUCCA-Mediated Biosynthesis of the Auxin IAA Is Required during the Somatic Embryogenic Induction Process in Coffea canephora. Int J Mol Sci 2020;21:E4751. [PMID: 32635392 PMCID: PMC7369726 DOI: 10.3390/ijms21134751] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/18/2020] [Revised: 06/24/2020] [Accepted: 06/28/2020] [Indexed: 12/24/2022]  Open
27
Jekayinoluwa T, Tripathi JN, Obiero G, Muge E, Tripathi L. Phytochemical Analysis and Establishment of Embryogenic Cell Suspension and Agrobacterium-mediated Transformation for Farmer Preferred Cultivars of West African Plantain (Musa spp.). PLANTS 2020;9:plants9060789. [PMID: 32599771 PMCID: PMC7357122 DOI: 10.3390/plants9060789] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/23/2020] [Revised: 06/15/2020] [Accepted: 06/20/2020] [Indexed: 12/23/2022]
28
Guo H, Guo H, Zhang L, Fan Y, Wu J, Tang Z, Zhang Y, Fan Y, Zeng F. Dynamic Transcriptome Analysis Reveals Uncharacterized Complex Regulatory Pathway Underlying Genotype-Recalcitrant Somatic Embryogenesis Transdifferentiation in Cotton. Genes (Basel) 2020;11:E519. [PMID: 32392816 PMCID: PMC7290922 DOI: 10.3390/genes11050519] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/10/2020] [Revised: 04/21/2020] [Accepted: 05/05/2020] [Indexed: 11/27/2022]  Open
29
Azizi P, Hanafi MM, Sahebi M, Harikrishna JA, Taheri S, Yassoralipour A, Nasehi A. Epigenetic changes and their relationship to somaclonal variation: a need to monitor the micropropagation of plantation crops. FUNCTIONAL PLANT BIOLOGY : FPB 2020;47:508-523. [PMID: 32349860 DOI: 10.1071/fp19077] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/22/2019] [Accepted: 02/23/2020] [Indexed: 06/11/2023]
30
Radoeva T, Albrecht C, Piepers M, de Vries S, Weijers D. Suspensor-derived somatic embryogenesis in Arabidopsis. Development 2020;147:dev.188912. [DOI: 10.1242/dev.188912] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/29/2020] [Accepted: 06/08/2020] [Indexed: 01/16/2023]
31
Li HL, Guo D, Zhu JH, Wang Y, Peng SQ. Identification of histone methylation modifiers and their expression patterns during somatic embryogenesis in Hevea brasiliensis. Genet Mol Biol 2019;43:e20180141. [PMID: 31441928 PMCID: PMC7229888 DOI: 10.1590/1678-4685-gmb-2018-0141] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/16/2018] [Accepted: 03/10/2019] [Indexed: 12/17/2022]  Open
32
Homeologous regulation of Frigida-like genes provides insights on reproductive development and somatic embryogenesis in the allotetraploid Coffea arabica. Sci Rep 2019;9:8446. [PMID: 31186437 PMCID: PMC6560031 DOI: 10.1038/s41598-019-44666-6] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/16/2018] [Accepted: 05/22/2019] [Indexed: 01/10/2023]  Open
33
Testillano PS. Microspore embryogenesis: targeting the determinant factors of stress-induced cell reprogramming for crop improvement. JOURNAL OF EXPERIMENTAL BOTANY 2019;70:2965-2978. [PMID: 30753698 DOI: 10.1093/jxb/ery464] [Citation(s) in RCA: 44] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/31/2018] [Accepted: 12/17/2018] [Indexed: 05/17/2023]
34
Méndez-Hernández HA, Ledezma-Rodríguez M, Avilez-Montalvo RN, Juárez-Gómez YL, Skeete A, Avilez-Montalvo J, De-la-Peña C, Loyola-Vargas VM. Signaling Overview of Plant Somatic Embryogenesis. FRONTIERS IN PLANT SCIENCE 2019;10:77. [PMID: 30792725 PMCID: PMC6375091 DOI: 10.3389/fpls.2019.00077] [Citation(s) in RCA: 113] [Impact Index Per Article: 22.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/17/2018] [Accepted: 01/17/2019] [Indexed: 05/17/2023]
35
Detection of Histone Modifications Associated with miRNAs. Methods Mol Biol 2019. [PMID: 30701512 DOI: 10.1007/978-1-4939-9042-9_25] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register]
36
Li J, Wang M, Li Y, Zhang Q, Lindsey K, Daniell H, Jin S, Zhang X. Multi-omics analyses reveal epigenomics basis for cotton somatic embryogenesis through successive regeneration acclimation process. PLANT BIOTECHNOLOGY JOURNAL 2019;17:435-450. [PMID: 29999579 PMCID: PMC6335067 DOI: 10.1111/pbi.12988] [Citation(s) in RCA: 72] [Impact Index Per Article: 14.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/04/2018] [Revised: 07/04/2018] [Accepted: 07/10/2018] [Indexed: 05/20/2023]
37
Sugimoto K, Temman H, Kadokura S, Matsunaga S. To regenerate or not to regenerate: factors that drive plant regeneration. CURRENT OPINION IN PLANT BIOLOGY 2019;47:138-150. [PMID: 30703741 DOI: 10.1016/j.pbi.2018.12.002] [Citation(s) in RCA: 25] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/22/2018] [Revised: 12/19/2018] [Accepted: 12/21/2018] [Indexed: 05/23/2023]
38
Pais MS. Somatic Embryogenesis Induction in Woody Species: The Future After OMICs Data Assessment. FRONTIERS IN PLANT SCIENCE 2019;10:240. [PMID: 30984207 PMCID: PMC6447717 DOI: 10.3389/fpls.2019.00240] [Citation(s) in RCA: 21] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/17/2018] [Accepted: 02/12/2019] [Indexed: 05/15/2023]
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Osorio-Montalvo P, Sáenz-Carbonell L, De-la-Peña C. 5-Azacytidine: A Promoter of Epigenetic Changes in the Quest to Improve Plant Somatic Embryogenesis. Int J Mol Sci 2018;19:E3182. [PMID: 30332727 PMCID: PMC6214027 DOI: 10.3390/ijms19103182] [Citation(s) in RCA: 30] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/25/2018] [Revised: 10/09/2018] [Accepted: 10/10/2018] [Indexed: 02/06/2023]  Open
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Karim R, Tan YS, Singh P, Khalid N, Harikrishna JA. Expression and DNA methylation of SERK, BBM, LEC2 and WUS genes in in vitro cultures of Boesenbergia rotunda (L.) Mansf. PHYSIOLOGY AND MOLECULAR BIOLOGY OF PLANTS : AN INTERNATIONAL JOURNAL OF FUNCTIONAL PLANT BIOLOGY 2018;24:741-751. [PMID: 30150851 PMCID: PMC6103949 DOI: 10.1007/s12298-018-0566-8] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/30/2017] [Revised: 06/01/2018] [Accepted: 06/05/2018] [Indexed: 05/20/2023]
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Winnicki K, Żabka A, Polit JT, Maszewski J. Mitogen-activated protein kinases concentrate in the vicinity of chromosomes and may regulate directly cellular patterning in Vicia faba embryos. PLANTA 2018;248:307-322. [PMID: 29721610 DOI: 10.1007/s00425-018-2905-y] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/02/2018] [Accepted: 04/26/2018] [Indexed: 06/08/2023]
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Mamedes-Rodrigues TC, Batista DS, Vieira NM, Matos EM, Fernandes D, Nunes-Nesi A, Cruz CD, Viccini LF, Nogueira FTS, Otoni WC. Regenerative potential, metabolic profile, and genetic stability of Brachypodium distachyon embryogenic calli as affected by successive subcultures. PROTOPLASMA 2018;255:655-667. [PMID: 29080994 DOI: 10.1007/s00709-017-1177-x] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/09/2017] [Accepted: 10/17/2017] [Indexed: 06/07/2023]
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Lee K, Seo PJ. Dynamic Epigenetic Changes during Plant Regeneration. TRENDS IN PLANT SCIENCE 2018;23:235-247. [PMID: 29338924 DOI: 10.1016/j.tplants.2017.11.009] [Citation(s) in RCA: 89] [Impact Index Per Article: 14.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/06/2017] [Revised: 11/28/2017] [Accepted: 11/29/2017] [Indexed: 05/18/2023]
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Escobedo-Gracia-Medrano RM, Burgos-Tan MJ, Ku-Cauich JR, Quiroz-Moreno A. Using Flow Cytometry Analysis in Plant Tissue Culture Derived Plants. Methods Mol Biol 2018;1815:317-332. [PMID: 29981132 DOI: 10.1007/978-1-4939-8594-4_22] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
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Aguilar-Hernández V, Loyola-Vargas VM. Advanced Proteomic Approaches to Elucidate Somatic Embryogenesis. FRONTIERS IN PLANT SCIENCE 2018;9:1658. [PMID: 30524454 PMCID: PMC6262180 DOI: 10.3389/fpls.2018.01658] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/13/2018] [Accepted: 10/25/2018] [Indexed: 05/06/2023]
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Loyola-Vargas VM, Ochoa-Alejo N. An Introduction to Plant Tissue Culture: Advances and Perspectives. Methods Mol Biol 2018;1815:3-13. [PMID: 29981111 DOI: 10.1007/978-1-4939-8594-4_1] [Citation(s) in RCA: 25] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
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Magnani E, Jiménez-Gómez JM, Soubigou-Taconnat L, Lepiniec L, Fiume E. Profiling the onset of somatic embryogenesis in Arabidopsis. BMC Genomics 2017;18:998. [PMID: 29284399 PMCID: PMC5747089 DOI: 10.1186/s12864-017-4391-1] [Citation(s) in RCA: 34] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/14/2017] [Accepted: 12/15/2017] [Indexed: 11/10/2022]  Open
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Horstman A, Bemer M, Boutilier K. A transcriptional view on somatic embryogenesis. ACTA ACUST UNITED AC 2017;4:201-216. [PMID: 29299323 PMCID: PMC5743784 DOI: 10.1002/reg2.91] [Citation(s) in RCA: 104] [Impact Index Per Article: 14.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/22/2016] [Revised: 09/15/2017] [Accepted: 10/04/2017] [Indexed: 12/12/2022]
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Yakovlev IA, Fossdal CG. In Silico Analysis of Small RNAs Suggest Roles for Novel and Conserved miRNAs in the Formation of Epigenetic Memory in Somatic Embryos of Norway Spruce. Front Physiol 2017;8:674. [PMID: 28943851 PMCID: PMC5596105 DOI: 10.3389/fphys.2017.00674] [Citation(s) in RCA: 37] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/14/2017] [Accepted: 08/23/2017] [Indexed: 12/27/2022]  Open
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Tikhenko N, Rutten T, Senula A, Rubtsova M, Keller ERJ, Börner A. The changes in the reproductive barrier between hexaploid wheat (Triticum aestivum L.) and rye (Secale cereale L.): different states lead to different fates. PLANTA 2017;246:377-388. [PMID: 28424873 DOI: 10.1007/s00425-017-2694-8] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/31/2017] [Accepted: 04/12/2017] [Indexed: 06/07/2023]
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