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Han B, Zhang W, Wang F, Yue P, Liu Z, Yue D, Zhang B, Ma Y, Lin Z, Yu Y, Wang Y, Zhang X, Yang X. Dissecting the Superior Drivers for the Simultaneous Improvement of Fiber Quality and Yield Under Drought Stress Via Genome-Wide Artificial Introgressions of Gossypium barbadense into Gossypium hirsutum. ADVANCED SCIENCE (WEINHEIM, BADEN-WURTTEMBERG, GERMANY) 2024; 11:e2400445. [PMID: 38984458 PMCID: PMC11425955 DOI: 10.1002/advs.202400445] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/12/2024] [Revised: 05/07/2024] [Indexed: 07/11/2024]
Abstract
Global water scarcity and extreme weather intensify drought stress, significantly reducing cotton yield and quality worldwide. Drought treatments are conducted using a population of chromosome segment substitution lines generated from E22 (G. hirsutum) and 3-79 (G. barbadense) as parental lines either show superior yields or fiber quality under both control and drought conditions. Fourteen datasets, covering 4 yields and 4 quality traits, are compiled and assessed for drought resistance using the drought resistance coefficient (DRC) and membership function value of drought resistance (MFVD). Genome-wide association studies, linkage analysis, and bulked segregant analysis are combined to analyze the DR-related QTL. A total of 121 significant QTL are identified by DRC and MFVD of the 8 traits. CRISPR/Cas9 and virus-induced gene silencing techniques verified DRR1 and DRT1 as pivotal genes in regulating drought resistant of cotton, with hap3-79 exhibiting greater drought resistance than hapE22 concerning DRR1 and DRT1. Moreover, 14 markers with superior yield and fiber quality are selected for drought treatment. This study offers valuable insights into yield and fiber quality variations between G. hirsutum and G. barbadense amid drought, providing crucial theoretical and technological backing for developing cotton varieties resilient to drought, with high yield and superior fiber quality.
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Affiliation(s)
- Bei Han
- National Key Laboratory of Crop Genetic ImprovementHuazhong Agricultural UniversityWuhan430070China
| | - Wenhao Zhang
- National Key Laboratory of Crop Genetic ImprovementHuazhong Agricultural UniversityWuhan430070China
| | - Fengjiao Wang
- National Key Laboratory of Crop Genetic ImprovementHuazhong Agricultural UniversityWuhan430070China
| | - Pengkai Yue
- National Key Laboratory of Crop Genetic ImprovementHuazhong Agricultural UniversityWuhan430070China
| | - Zhilin Liu
- National Key Laboratory of Crop Genetic ImprovementHuazhong Agricultural UniversityWuhan430070China
| | - Dandan Yue
- National Key Laboratory of Crop Genetic ImprovementHuazhong Agricultural UniversityWuhan430070China
| | - Bing Zhang
- National Key Laboratory of Crop Genetic ImprovementHuazhong Agricultural UniversityWuhan430070China
| | - Yizan Ma
- National Key Laboratory of Crop Genetic ImprovementHuazhong Agricultural UniversityWuhan430070China
| | - Zhongxu Lin
- National Key Laboratory of Crop Genetic ImprovementHuazhong Agricultural UniversityWuhan430070China
- Hubei Hongshan LaboratoryWuhan430070China
| | - Yu Yu
- Cotton InstituteXinjiang Academy of Agriculture and Reclamation ScienceShihezi832000China
| | - Yanqin Wang
- College of Life SciencesTarim UniversityAlar843300China
| | - Xianlong Zhang
- National Key Laboratory of Crop Genetic ImprovementHuazhong Agricultural UniversityWuhan430070China
- Hubei Hongshan LaboratoryWuhan430070China
| | - Xiyan Yang
- National Key Laboratory of Crop Genetic ImprovementHuazhong Agricultural UniversityWuhan430070China
- Hubei Hongshan LaboratoryWuhan430070China
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Chetverikov S, Kuzina E, Feoktistova A, Timergalin M, Rameev T, Bakaeva M, Zaitsev G, Davydychev A, Korshunova T. Mitigation of the Negative Effect of Drought and Herbicide Treatment on Growth, Yield, and Stress Markers in Bread Wheat as a Result of the Use of the Plant Growth Regulator Azolen ®. PLANTS (BASEL, SWITZERLAND) 2024; 13:2297. [PMID: 39204733 PMCID: PMC11359348 DOI: 10.3390/plants13162297] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/01/2024] [Revised: 07/28/2024] [Accepted: 08/16/2024] [Indexed: 09/04/2024]
Abstract
Most chemical pesticides, in addition to their main functions (protection against diseases, weeds, and pests), also have a noticeable inhibitory effect on target crops. In a laboratory experiment and two-year field experiments (Russia, Trans-Urals), a study was made of the effect of the biopreparation Azolen® (Azotobacter vinelandii IB-4) on plants of the Ekada 113 wheat variety under conditions of drought and stress caused by the exposure to the herbicide Chistalan (2.4-D and dicamba). The biopreparation and the herbicide were used separately and together on wheat during the tillering phase. Treatment with the biological preparation under stressful conditions had a significant effect on the hormonal balance of plants (a decrease in the amount of abscisic acid and a normalization of the balance of indolyl-3-acetic acid and cytokinins in shoots and roots of plants was noted), while the osmoprotective, antioxidant, and photosynthetic systems of plants were activated. In drought conditions, the treatment of plants with biological preparation prevented the inhibition of root growth caused by the use of the herbicide. This, in turn, improved the absorption of water by plants and ensured an increase in wheat yield (1.6 times). The results obtained give reason to believe that microbiological preparations can be used as antidotes that weaken the phytotoxic effect of herbicidal treatments, including in drought conditions.
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Affiliation(s)
| | | | | | | | | | | | - Gleb Zaitsev
- Ufa Institute of Biology, Ufa Federal Research Centre, Russian Academy of Sciences, Ufa 450054, Russia; (S.C.); (E.K.); (A.F.); (M.T.); (T.R.); (M.B.); (A.D.); (T.K.)
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Mokhtari N, Majidi MM, Mirlohi A. Physiological and antioxidant responses of synthetic hexaploid wheat germplasm under drought. BMC PLANT BIOLOGY 2024; 24:747. [PMID: 39098916 PMCID: PMC11299349 DOI: 10.1186/s12870-024-05445-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/29/2023] [Accepted: 07/22/2024] [Indexed: 08/06/2024]
Abstract
BACKGROUND As a result of the world population and climate change impact increases (especially in arid environments), there is a critical need for high-yield, drought-tolerant wheat. Synthetic hexaploid wheat derived lines (SHW-DL), were created artificially by crossing different durum wheat cultivars (AABB) with accessions of Aegilops tauschii (DD), a beneficial source of new genes for common bread wheat (Triticum aestivum L). Here, we studied the response of a panel of 91 SHW-DL for drought tolerance based on physiological, antioxidant enzyme activities, and drought tolerance indices. RESULTS A wide range of variation and high values of heritability observed for grain yield, physiological and antioxidant traits indicating that the SHW-DL panel constitutes a valuable gene source for drought tolerance improvement of wheat. Despite decreases in grain yield (YLD), leaf area index (LAI), and relative water content (RWC) an increase in the content of malondialdehyde (MDA) was observed. Moreover, drought streass increased the antioxidant enzyme activities of ascorbate peroxidase (APX), catalase (CAT) and peroxidase (POD), and also photosynthetic pigments, proline (Pro), and MDA content. With higher values of grain yield, physiological and biochemical traits such as photosynthetic pigments, and RWC, and lower content of MDA, and peroxidase (H2O2) activity, SHW-DL performed better compared to common wheat lines under water stress conditions. CONCLUSIONS Different responses to water stress within the germplasm and between synthetic and common wheat suggest that selection for adaptive and suitable genotypes is possible for drought tolerance in synthetic wheat germplasm. Genotypes 54, 98, 102, 105, 122, 124, 143, 159, 196, and 198 were identified to be directly used in breeding programs or indirectly by crossing them with other wheat germplasm collections.
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Affiliation(s)
- Niloofar Mokhtari
- Department of Agronomy and Plant Breeding, College of Agriculture, Isfahan University of Technology, Isfahan, 8415683111, Iran
| | - Mohammad Mahdi Majidi
- Department of Agronomy and Plant Breeding, College of Agriculture, Isfahan University of Technology, Isfahan, 8415683111, Iran.
| | - Aghafakhr Mirlohi
- Department of Agronomy and Plant Breeding, College of Agriculture, Isfahan University of Technology, Isfahan, 8415683111, Iran
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Makebe A, Shimelis H, Mashilo J. Selection of M5 mutant lines of wheat ( Triticum aestivum L.) for agronomic traits and biomass allocation under drought stress and non-stressed conditions. FRONTIERS IN PLANT SCIENCE 2024; 15:1314014. [PMID: 38419777 PMCID: PMC10899435 DOI: 10.3389/fpls.2024.1314014] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/10/2023] [Accepted: 01/22/2024] [Indexed: 03/02/2024]
Abstract
Introduction In the face of climate changes and limited water availability for irrigated crop production, enhanced drought tolerance and adaptation is vital to improve wheat productivity. The objective of this study was to determine the responses of newly bred and advanced mutant lines of wheat based on agronomic traits and biomass allocation under drought-stressed and non-stressed environments for production and breeding. Methods Fifty-three mutant lines, including the parental check and six check varieties, were evaluated under non-stressed (NS) and drought stressed (DS) conditions in the field and controlled environments using a 20 x 3 alpha lattice design with two replicates. The following agronomic data were collected: days to 50% heading (DTH), days to maturity (DTM), plant height (PH), number of productive tillers (PTN), shoot biomass (SB), root biomass (RB), total biomass (TB), root: shoot ratio (RSR), spike length (SL), thousand seeds weight (TSW) and grain yield (GY). Data were analyzed and summarized using various statistical procedures and drought tolerance indices were computed based on grain yield under NS and DS conditions. Results Significant (P < 0.05) differences were recorded among the mutant lines for most assessed traits under NS and DS conditions. Grain yield positively and significantly (p < 0.001) correlated with PTN (r = 0.85), RB (r = 0.75), SB (r = 0.80), SL (r =0.73), TB (r = 0.65), and TSW (r = 0.67) under DS condition. Principal component analysis revealed three components contributing to 78.55% and 77.21% of the total variability for the assessed agronomic traits under DS and NS conditions, respectively. The following traits: GY, RB, SB, and PTN explained most of the variation with high loading scores under DS condition. Geometric mean productivity (GMP), mean productivity (MP), harmonic mean (HM), and stress tolerance index (STI) were identified as the best drought tolerance indices for the identification of tolerant lines with positive correlations with GY under NS and DS conditions. Discussion Among the advanced lines tested, LMA16, LMA37, LMA47, LMA2, and LMA42 were selected as the superior lines with high performance and drought tolerance. The selected lines are recommended for multi-environment trails and release for production in water-limited environments in South Africa.
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Affiliation(s)
- Athenkosi Makebe
- African Centre for Crop Improvement (ACCI), University of KwaZulu-Natal, Pietermaritzburg, South Africa
| | - Hussein Shimelis
- African Centre for Crop Improvement (ACCI), University of KwaZulu-Natal, Pietermaritzburg, South Africa
| | - Jacob Mashilo
- African Centre for Crop Improvement (ACCI), University of KwaZulu-Natal, Pietermaritzburg, South Africa
- Limpopo Department of Agriculture and Rural Development, Bela-Bela, South Africa
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Qiu H, Sun C, Dormatey R, Bai J, Bi Z, Liu Y, Liu Z, Wei J, Mao S, Yao P. Thiamethoxam Application Improves Yield and Drought Resistance of Potatoes ( Solanum tuberosum L.). PLANTS (BASEL, SWITZERLAND) 2024; 13:477. [PMID: 38498458 PMCID: PMC10891895 DOI: 10.3390/plants13040477] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/06/2023] [Revised: 02/01/2024] [Accepted: 02/03/2024] [Indexed: 03/20/2024]
Abstract
(1) Background: Potato is the most important tuber crop in the world that can contribute to food security. However, the crop has been shown to be sensitive to drought and its yields decline significantly during successive periods of stress. Drought triggers a number of responses in potato, ranging from physiological changes to fluctuations in growth rates and yields. In light of global climate change, it is important to understand the effects of thiamethoxam on potato growth and yield under drought conditions. (2) Methods: The objective was to evaluate the impact of thiamethoxam on improving drought resistance and yield of potato under drought conditions. The drought-tolerant and sensitive-genotypes Qingshu No. 9 and Atlantic were used for a two-year pot experiment. Potato seeds were coated with 70% thiamethoxam before sowing (treatment group (T)), with a control group without treatment (NT). Two experimental treatments were applied: normal irrigation (ND) and drought stress (D). (3) Results: The results showed that root length, plant yield, chlorophyll content and superoxide dismutase (SOD) activity significantly increased under both genotypes, while malondialdehyde (MDA) and proline (Pro) content were reduced under thiamethoxam under drought stress. The best indicators were obtained in the comprehensive evaluation for the T-D treatment, suggesting that the application of thiamethoxam under drought stress was more effective than normal irrigation. (4) Conclusions: Our results suggest that the application of thiamethoxam improves potato growth, thereby increasing drought tolerance and potato yield. However, thiamethoxam is a neonicotinoid pesticide, and the limitation of this study is that it did not explore the ecological effects of thiamethoxam, which need to be systematically studied in the future. Moreover, considering the potential risks of thiamethoxam to the environment, specific agronomic measures to effectively degrade thiamethoxam residue should be taken when it is applied in agricultural production.
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Affiliation(s)
- Hailong Qiu
- State Key Laboratory of Aridland Crop Science/College of Agronomy, Gansu Agricultural University, Lanzhou 730070, China; (H.Q.); (C.S.); (R.D.); (J.B.); (Z.B.); (Y.L.); (Z.L.); (J.W.); (S.M.)
| | - Chao Sun
- State Key Laboratory of Aridland Crop Science/College of Agronomy, Gansu Agricultural University, Lanzhou 730070, China; (H.Q.); (C.S.); (R.D.); (J.B.); (Z.B.); (Y.L.); (Z.L.); (J.W.); (S.M.)
| | - Richard Dormatey
- State Key Laboratory of Aridland Crop Science/College of Agronomy, Gansu Agricultural University, Lanzhou 730070, China; (H.Q.); (C.S.); (R.D.); (J.B.); (Z.B.); (Y.L.); (Z.L.); (J.W.); (S.M.)
- CSIR-Crops Research Institute, P.O. Box 3785, Kumasi 00233, Ghana
| | - Jiangping Bai
- State Key Laboratory of Aridland Crop Science/College of Agronomy, Gansu Agricultural University, Lanzhou 730070, China; (H.Q.); (C.S.); (R.D.); (J.B.); (Z.B.); (Y.L.); (Z.L.); (J.W.); (S.M.)
| | - Zhenzhen Bi
- State Key Laboratory of Aridland Crop Science/College of Agronomy, Gansu Agricultural University, Lanzhou 730070, China; (H.Q.); (C.S.); (R.D.); (J.B.); (Z.B.); (Y.L.); (Z.L.); (J.W.); (S.M.)
| | - Yuhui Liu
- State Key Laboratory of Aridland Crop Science/College of Agronomy, Gansu Agricultural University, Lanzhou 730070, China; (H.Q.); (C.S.); (R.D.); (J.B.); (Z.B.); (Y.L.); (Z.L.); (J.W.); (S.M.)
| | - Zhen Liu
- State Key Laboratory of Aridland Crop Science/College of Agronomy, Gansu Agricultural University, Lanzhou 730070, China; (H.Q.); (C.S.); (R.D.); (J.B.); (Z.B.); (Y.L.); (Z.L.); (J.W.); (S.M.)
| | - Jingui Wei
- State Key Laboratory of Aridland Crop Science/College of Agronomy, Gansu Agricultural University, Lanzhou 730070, China; (H.Q.); (C.S.); (R.D.); (J.B.); (Z.B.); (Y.L.); (Z.L.); (J.W.); (S.M.)
| | - Shoufa Mao
- State Key Laboratory of Aridland Crop Science/College of Agronomy, Gansu Agricultural University, Lanzhou 730070, China; (H.Q.); (C.S.); (R.D.); (J.B.); (Z.B.); (Y.L.); (Z.L.); (J.W.); (S.M.)
| | - Panfeng Yao
- State Key Laboratory of Aridland Crop Science/College of Agronomy, Gansu Agricultural University, Lanzhou 730070, China; (H.Q.); (C.S.); (R.D.); (J.B.); (Z.B.); (Y.L.); (Z.L.); (J.W.); (S.M.)
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Pandey J, Gautam S, Scheuring DC, Koym JW, Vales MI. Variation and genetic basis of mineral content in potato tubers and prospects for genomic selection. FRONTIERS IN PLANT SCIENCE 2023; 14:1301297. [PMID: 38186596 PMCID: PMC10766833 DOI: 10.3389/fpls.2023.1301297] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/24/2023] [Accepted: 12/05/2023] [Indexed: 01/09/2024]
Abstract
Malnutrition is a major public health concern in many parts of the world. Among other nutrients, minerals are necessary in the human diet. Potato tubers are a good source of minerals; they contribute 18% of the recommended dietary allowance of potassium; 6% of copper, phosphorus, and magnesium; and 2% of calcium and zinc. Increased public interest in improving the nutritional value of foods has prompted the evaluation of mineral content in tubers of advanced genotypes from the Texas A&M Potato Breeding Program and the investigation of the genetics underlying mineral composition in tubers. The objectives of this study were to i) assess phenotypic variation for mineral content in tubers of advanced potato genotypes, ii) identify genomic regions associated with tuber mineral content, and iii) obtain genomic-estimated breeding values. A panel of 214 advanced potato genotypes and reference varieties was phenotyped in three field environments in Texas for the content of 12 minerals in tubers and genotyped using the Infinium Illumina 22K V3 single nucleotide polymorphism (SNP) Array. There was significant variation between potato genotypes for all minerals evaluated except iron. As a market group, red-skinned potatoes had the highest amount of minerals, whereas russets had the lowest mineral content. Reds had significantly higher P, K, S, and Zn than russets and significantly higher P and Mg than chippers. Russets had significantly higher Ca, Mg, and Na than chippers. However, the chippers had significantly higher K than the russets. A genome-wide association study for mineral content using GWASpoly identified three quantitative trait loci (QTL) associated with potassium and manganese content on chromosome 5 and two QTL associated with zinc content on chromosome 7. The loci identified will contribute to a better understanding of the genetic basis of mineral content in potatoes. Genomic-estimated breeding values for mineral macro and micronutrients in tubers obtained with StageWise will guide the selection of parents and the advancement of genotypes in the breeding program to increase mineral content in potato tubers.
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Affiliation(s)
- Jeewan Pandey
- Department of Horticultural Sciences, Texas A&M University, College Station, TX, United States
| | - Sanjeev Gautam
- Department of Horticultural Sciences, Texas A&M University, College Station, TX, United States
| | - Douglas C. Scheuring
- Department of Horticultural Sciences, Texas A&M University, College Station, TX, United States
| | - Jeffrey W. Koym
- Texas A&M AgriLife Research and Extension Center, Lubbock, TX, United States
| | - M. Isabel Vales
- Department of Horticultural Sciences, Texas A&M University, College Station, TX, United States
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Rabieyan E, Bihamta MR, Moghaddam ME, Alipour H, Mohammadi V, Azizyan K, Javid S. Analysis of genetic diversity and genome-wide association study for drought tolerance related traits in Iranian bread wheat. BMC PLANT BIOLOGY 2023; 23:431. [PMID: 37715130 PMCID: PMC10503013 DOI: 10.1186/s12870-023-04416-3] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/02/2022] [Accepted: 08/20/2023] [Indexed: 09/17/2023]
Abstract
BACKGROUND Drought is most likely the most significant abiotic stress affecting wheat yield. The discovery of drought-tolerant genotypes is a promising strategy for dealing with the world's rapidly diminishing water resources and growing population. A genome-wide association study (GWAS) was conducted on 298 Iranian bread wheat landraces and cultivars to investigate the genetic basis of yield, yield components, and drought tolerance indices in two cropping seasons (2018-2019 and 2019-2020) under rainfed and well-watered environments. RESULTS A heatmap display of hierarchical clustering divided cultivars and landraces into four categories, with high-yielding and drought-tolerant genotypes clustering in the same group. The results of the principal component analysis (PCA) demonstrated that selecting genotypes based on the mean productivity (MP), geometric mean productivity (GMP), harmonic mean (HM), and stress tolerance index (STI) can help achieve high-yield genotypes in the environment. Genome B had the highest number of significant marker pairs in linkage disequilibrium (LD) for both landraces (427,017) and cultivars (370,359). Similar to cultivars, marker pairs on chromosome 4A represented the strongest LD (r2 = 0.32). However, the genomes D, A, and B have the highest LD, respectively. The single-locus mixed linear model (MLM) and multi-locus random-SNP-effect mixed linear model (mrMLM) identified 1711 and 1254 significant marker-trait association (MTAs) (-log10 P > 3) for all traits, respectively. A total of 874 common quantitative trait nucleotides (QTNs) were simultaneously discovered by both MLM and mrMLM methods. Gene ontology revealed that 11, 18, 6, and 11 MTAs were found in protein-coding regions (PCRs) for spike weight (SW), thousand kernel weight (TKW), grain number per spike (GN), and grain yield (GY), respectively. CONCLUSION The results identified rich regions of quantitative trait loci (QTL) on Ch. 4A and 5A suggest that these chromosomes are important for drought tolerance and could be used in wheat breeding programs. Furthermore, the findings indicated that landraces studied in Iranian bread wheat germplasm possess valuable alleles, that are responsive to water-limited conditions. This GWAS experiment is one of the few types of research conducted on drought tolerance that can be exploited in the genome-mediated development of novel varieties of wheat.
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Affiliation(s)
- Ehsan Rabieyan
- Department of Agronomy and Plant Breeding, Faculty of Agricultural Sciences and Engineering, University of Tehran, Karaj, Iran
| | - Mohammad Reza Bihamta
- Department of Agronomy and Plant Breeding, Faculty of Agricultural Sciences and Engineering, University of Tehran, Karaj, Iran.
| | - Mohsen Esmaeilzadeh Moghaddam
- Cereal Department, Seed and Plant Improvement Institute, Agricultural Research, Education and Extension Organization (AREEO), Karaj, Iran
| | - Hadi Alipour
- Department of Plant Production and Genetics, Faculty of Agriculture, Urmia University, Urmia, Iran.
| | - Valiollah Mohammadi
- Department of Agronomy and Plant Breeding, Faculty of Agricultural Sciences and Engineering, University of Tehran, Karaj, Iran
| | - Kobra Azizyan
- Department of Agronomy and Plant Breeding, Faculty of Agricultural Sciences and Engineering, University of Tehran, Karaj, Iran
| | - Saeideh Javid
- Department of Agronomy and Plant Breeding, Faculty of Agricultural Sciences and Engineering, University of Tehran, Karaj, Iran
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Tian X, Sang Z, Lan Z, Liu W, Feng Y, Hu J, Chen F, Liu Y. Fine-Scale analysis of both wild and cultivated horned galls provides insight into their quality differentiation. BMC PLANT BIOLOGY 2023; 23:426. [PMID: 37710158 PMCID: PMC10500821 DOI: 10.1186/s12870-023-04442-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/06/2022] [Accepted: 09/06/2023] [Indexed: 09/16/2023]
Abstract
BACKGROUND Galla chinensis is a traditional Chinese medicine (TCM) produced due to the interaction between the Fordinae aphids and the Rhus plant species. Horned galls with high tannin content are the most widely cultivated gall type, and Wufeng county of Hubei province in China is the center of cultivation. However, long-term artificial cultivation and domestication of horned galls to meet the increasing production demand have led to quality degradation. Understanding the reasons underlying quality degradation is urgent for horned gall production and application. The present study used a combination of metabolic, genetic, and ecological analyses to investigate the quality and genetic differentiation of the horned galls under long-term domestication as well as the potential relationships between them. RESULTS Analysis of gallic acid content and other three phenotypic traits (fresh weight, gall size, and wall thickness) revealed quality differentiation of horned galls collected from five locations in Wufeng, in which the cultivated samples from Wang Jiaping (WJP) showed the highest degradation. Genetic differentiation between the cultivated and wild Rhus chinensis trees in WJP, and between WJP and the other populations was detected based on SSR molecular markers, however, no significant difference in genetic structure was seen for the aphid populations. Among the various ecological factors examined, temperature was identified as the primary one affecting the quality of horned galls. CONCLUSIONS Both genetic and ecological factors caused quality differentiation of horned galls. The collection of diverse germplasm of host trees and aphids will help reduce the quality degradation of horned galls in Wufeng.
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Affiliation(s)
- Xufang Tian
- College of Pharmacy, Hubei University of Chinese Medicine, Wuhan, 430065, People's Republic of China
| | - Ziyang Sang
- Forestry Science Research Institute of Wufeng County, Yichang, 443400, People's Republic of China
| | - Zhaohui Lan
- College of Pharmacy, Hubei University of Chinese Medicine, Wuhan, 430065, People's Republic of China
| | - Wei Liu
- College of Pharmacy, Hubei University of Chinese Medicine, Wuhan, 430065, People's Republic of China
| | - Ying Feng
- College of Pharmacy, Hubei University of Chinese Medicine, Wuhan, 430065, People's Republic of China
| | - Juan Hu
- College of Pharmacy, Hubei University of Chinese Medicine, Wuhan, 430065, People's Republic of China
| | - Faju Chen
- Biotechnology Research Center, China Three Gorges University, Yichang, 443002, People's Republic of China
| | - Yifei Liu
- College of Pharmacy, Hubei University of Chinese Medicine, Wuhan, 430065, People's Republic of China.
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Lozo J, Ristović N, Kungulovski G, Jovanović Ž, Rakić T, Stanković S, Radović S. Rhizosphere microbiomes of resurrection plants Ramonda serbica and R. nathaliae: comparative analysis and search for bacteria mitigating drought stress in wheat (Triticum aestivum L.). World J Microbiol Biotechnol 2023; 39:256. [PMID: 37474779 DOI: 10.1007/s11274-023-03702-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/26/2023] [Accepted: 07/12/2023] [Indexed: 07/22/2023]
Abstract
Rhizosphere microbial communities play an important role in maintaining the health and productivity of the plant host. The rhizobacteria Pseudomonas putida P2 of Ramonda serbica and Bacillus cereus P5 of R. nathaliae were selected for treatment of the Belija wheat cultivar because of their plant growth-promoting (PGP) properties. Compared to the non-treated drought-stressed plants, the plants treated with rhizobacteria showed increased activity of the two major antioxidant enzymes, superoxide dismutase, and ascorbate peroxidase. Plants treated with the B. cereus P5 strain exhibited higher proline content under drought stress, suggesting that proline accumulation depends on the relative water content (RWC) status of the plants studied. Inoculation of wheat seeds with the P. putida P2 strain improved water status by increasing RWC and alleviating oxidative stress by reducing H2O2 and malondialdehyde concentrations in plants exposed to severe drought, possibly also helping plants to overcome drought through its 1-aminocyclopropane-1-carboxylic acid deaminase activity. Analysis of data from Next Generation sequencing (NGS) revealed that the dominant bacterial taxa in the rhizosphere of resurrection plants R. serbica and R. nathaliae were extremophilic, thermotolerant, Vicinamibacter silvestris, Chthoniobacter flavus, and Gaiella occulta. From the fungi detected Penicillium was the most abundant in both samples, while Fusarium and Mucor were present only in the rhizosphere of R. serbica and the entomopathogenic fungi Metarhizium, and Tolypocladiumu only in the rhizosphere of R. nathaliae. The fungal communities varied among plants, suggesting a stronger environmental influence than plant species. Our study demonstrates the importance of in vivo experiments to confirm the properties of PGP bacteria and indicates that the rhizosphere of resurrection plants is a valuable source of unique microorganisms that can be used to improve the drought stress tolerance of crops.
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Affiliation(s)
- Jelena Lozo
- Faculty of Biology, University of Belgrade, Studentski trg 16, Belgrade, 11000, Serbia.
- Faculty of Biology, Centre for biological control and plant growth promotion, University of Belgrade, Belgrade, Serbia.
| | - Nemanja Ristović
- Faculty of Biology, University of Belgrade, Studentski trg 16, Belgrade, 11000, Serbia
| | | | - Živko Jovanović
- Faculty of Biology, University of Belgrade, Studentski trg 16, Belgrade, 11000, Serbia
| | - Tamara Rakić
- Faculty of Biology, University of Belgrade, Studentski trg 16, Belgrade, 11000, Serbia
| | - Slaviša Stanković
- Faculty of Biology, University of Belgrade, Studentski trg 16, Belgrade, 11000, Serbia
- Faculty of Biology, Centre for biological control and plant growth promotion, University of Belgrade, Belgrade, Serbia
| | - Svetlana Radović
- Faculty of Biology, University of Belgrade, Studentski trg 16, Belgrade, 11000, Serbia
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Ali I, Anwar S, Ali A, Ullah Z, Binjawhar DN, Sher H, Abdel-Hameed UK, Khan MA, Majeed K, Jaremko M. Biochemical and phenological characterization of diverse wheats and their association with drought tolerance genes. BMC PLANT BIOLOGY 2023; 23:326. [PMID: 37331960 DOI: 10.1186/s12870-023-04278-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/11/2022] [Accepted: 05/11/2023] [Indexed: 06/20/2023]
Abstract
Drought is one of the most important wheat production limiting factor, and can lead to severe yield losses. This study was designed to examine the effect of drought stress on wheat physiology and morphology under three different field capacities (FC) viz. 80% (control), 50% (moderate) and 30% (severe drought stress) in a diverse collection of wheat germplasm including cultivars, landraces, synthetic hexaploid and their derivatives. Traits like grain weight, thousand grain weight and biomass were reduced by 38.23%, 18.91% and 26.47% respectively at 30% FC, whereas the reduction rate for these traits at 50% FC were 19.57%, 8.88% and 18.68%. In principal component analysis (PCA), the first two components PC1 and PC2 accounted for 58.63% of the total variation and separated the cultivars and landraces from synthetic-based germplasm. Landraces showed wide range of phenotypic variations at 30% FC compared to synthetic-based germplasm and improved cultivars. However, least reduction in grain weight was observed in improved cultivars which indicated the progress in developing drought resilient cultivars. Allelic variations of the drought-related genes including TaSnRK2.9-5A, TaLTPs-11, TaLTPs-12, TaSAP-7B-, TaPPH-13, Dreb-B1 and 1fehw3 were significantly associated with the phenological traits under drought stress in all 91 wheats including 40 landraces, 9 varieties, 34 synthetic hexaploids and 8 synthetic derivatives. The favorable haplotypes of 1fehw3, Dreb-B1, TaLTPs-11 and TaLTPs-12 increased grain weight, and biomass. Our results iterated the fact that landraces could be promising source to deploy drought adaptability in wheat breeding. The study further identified drought tolerant wheat genetic resources across various backgrounds and identified favourable haplotypes of water-saving genes which should be considered to develop drought tolerant varieties.
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Affiliation(s)
- Iftikhar Ali
- Center for Plant Science and Biodiversity, University of Swat, Charbagh Swat, 19120, Pakistan.
- Department of Genetics and Development, Columbia University Irving Medical Center, New York, NY, 10032, USA.
- School of Life Sciences & Center of Novel Biomaterials, The Chinese University of Hong Kong, Hong Kong, 999077, Hong Kong.
| | - Saeed Anwar
- Center for Plant Science and Biodiversity, University of Swat, Charbagh Swat, 19120, Pakistan
| | - Ahmad Ali
- Center for Plant Science and Biodiversity, University of Swat, Charbagh Swat, 19120, Pakistan.
| | - Zahid Ullah
- Center for Plant Science and Biodiversity, University of Swat, Charbagh Swat, 19120, Pakistan
| | - Dalal Nasser Binjawhar
- Department of Chemistry, College of Science, Princess Nourah Bint Abdulrahman University, Riyadh, 11671, Saudi Arabia.
| | - Hassan Sher
- Center for Plant Science and Biodiversity, University of Swat, Charbagh Swat, 19120, Pakistan
| | - Usama K Abdel-Hameed
- Biology Department, College of Science, Taibah University, Al-Madinah Al-Munawarah, 42353, Saudi Arabia
- Botany Department, Faculty of Science, Ain Shams University, Cairo, 11566, Egypt
| | | | - Khawar Majeed
- Department of Plant Sciences, Quaid-I-Azam University, Islamabad, Pakistan
| | - Mariusz Jaremko
- Smart-Health Initiative (SHI) and Red Sea Research Center (RSRC), Division of Biological and Environmental Sciences and Engineering (BESE), King Abdullah University of Science and Technology (KAUST), Thuwal, 329555-6900, Saudi Arabia
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11
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Chaouachi L, Marín-Sanz M, Kthiri Z, Boukef S, Harbaoui K, Barro F, Karmous C. The opportunity of using durum wheat landraces to tolerate drought stress: screening morpho-physiological components. AOB PLANTS 2023; 15:plad022. [PMID: 37228421 PMCID: PMC10205476 DOI: 10.1093/aobpla/plad022] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/17/2022] [Accepted: 04/30/2023] [Indexed: 05/27/2023]
Abstract
Local genetic resources could constitute a promising solution to overcome drought stress. Thus, eight (8) durum wheat landraces and one improved variety were assessed for drought tolerance in pots under controlled conditions. Three water treatments were tested: control (100 % of the field capacity (FC)), medium (50 % FC) and severe (25 % FC) stress. The assessment was carried out at the seedling stage to mimic stress during crop set-up. Results showed that increased water stress led to a decrease in biomass and morpho-physiological parameters and an increase in antioxidant enzyme activities. Severe water stress decreased the chlorophyll fluorescence parameters, relative water content (RWC) and water potential of the investigated genotypes by 56.45, 20.58, 50.18 and 139.4 %, respectively. Besides, the phenolic compounds content increased by 169.2 % compared to the control. Catalase and guaiacol peroxidase activities increased 17 days after treatment for most genotypes except Karim and Hmira. A principal component analysis showed that the most contributed drought tolerance traits were chlorophyll fluorescence parameters, RWC and electrolyte conductivity. Unweighted pair group method with arithmetic mean clustering showed that the landraces Aouija, Biskri and Hedhba exhibited a higher adaptive response to drought stress treatments, indicating that water stress-adaptive traits are included in Tunisian landraces germplasm.
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Affiliation(s)
- Latifa Chaouachi
- Laboratory of Genetics and Cereal Breeding (LR14 AGR01), National Institute of Agronomy of Tunisia, Carthage University, 1082 Tunis, Tunisia
| | - Miriam Marín-Sanz
- Department of Plant Breeding, Institute for Sustainable Agriculture-Spanish National Research Council (IAS-CSIC), 14004 Córdoba, Spain
| | - Zayneb Kthiri
- Laboratory of Genetics and Cereal Breeding (LR14 AGR01), National Institute of Agronomy of Tunisia, Carthage University, 1082 Tunis, Tunisia
| | - Sameh Boukef
- High Institute of Agronomy of Chott Mariam, Sousse University, Chott-Mariem 13, Sousse 4042, Tunisia
| | - Kalthoum Harbaoui
- Higher School of Agriculture of Mateur, Carthage University, 7030 Route de Tabarka, Tunisia
| | - Francisco Barro
- Department of Plant Breeding, Institute for Sustainable Agriculture-Spanish National Research Council (IAS-CSIC), 14004 Córdoba, Spain
| | - Chahine Karmous
- Laboratory of Genetics and Cereal Breeding (LR14 AGR01), National Institute of Agronomy of Tunisia, Carthage University, 1082 Tunis, Tunisia
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12
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Ajayi OO, Bregitzer P, Klos K, Hu G, Walling JG, Mahalingam R. QTL mapping of shoot and seed traits impacted by Drought in Barley using a recombinant inbred line Population. BMC PLANT BIOLOGY 2023; 23:283. [PMID: 37245001 DOI: 10.1186/s12870-023-04292-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/02/2023] [Accepted: 05/17/2023] [Indexed: 05/29/2023]
Abstract
BACKGROUND With ongoing climate change, drought events are severely limiting barley production worldwide and pose a significant risk to the malting, brewing and food industry. The genetic diversity inherent in the barley germplasm offers an important resource to develop stress resiliency. The purpose of this study was to identify novel, stable, and adaptive Quantitative Trait Loci (QTL), and candidate genes associated with drought tolerance. A recombinant inbred line (RIL) population (n = 192) developed from a cross between the drought tolerant 'Otis' barley variety, and susceptible 'Golden Promise'(GP) was subjected to short-term progressive drought during heading in the biotron. This population was also evaluated under irrigated and rainfed conditions in the field for yields and seed protein content. RESULTS Barley 50k iSelect SNP Array was used to genotype the RIL population to elucidate drought-adaptive QTL. Twenty-three QTL (eleven for seed weight, eight for shoot dry weight and four for protein content) were identified across several barley chromosomes. QTL analysis identified genomic regions on chromosome 2 and 5 H that appear to be stable across both environments and accounted for nearly 60% variation in shoot weight and 17.6% variation in seed protein content. QTL at approximately 29 Mbp on chromosome 2 H and 488 Mbp on chromosome 5 H are in very close proximity to ascorbate peroxidase (APX) and in the coding sequence of the Dirigent (DIR) gene, respectively. Both APX and DIR are well-known key players in abiotic stress tolerance in several plants. In the quest to identify key recombinants with improved tolerance to drought (like Otis) and good malting profiles (like GP), five drought tolerant RILs were selected for malt quality analysis. The selected drought tolerant RILs exhibited one or more traits that were outside the realms of the suggested limits for acceptable commercial malting quality. CONCLUSIONS The candidate genes can be used for marker assisted selection and/or genetic manipulation to develop barley cultivars with improved tolerance to drought. RILs with genetic network reshuffling necessary to generate drought tolerance of Otis and favorable malting quality attributes of GP may be realized by screening a larger population.
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Affiliation(s)
- Oyeyemi O Ajayi
- Cereal Crops Research Unit, USDA-ARS, 502 Walnut Street, Madison, WI, 53762, USA
| | - Phil Bregitzer
- Small Grains and Potato Germplasm Research, USDA-ARS, Aberdeen, ID, USA
| | - Kathy Klos
- Small Grains and Potato Germplasm Research, USDA-ARS, Aberdeen, ID, USA
| | - Gongshe Hu
- Small Grains and Potato Germplasm Research, USDA-ARS, Aberdeen, ID, USA
| | - Jason G Walling
- Cereal Crops Research Unit, USDA-ARS, 502 Walnut Street, Madison, WI, 53762, USA
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13
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Anwar Z, Ijaz A, Ditta A, Wang B, Liu F, Khan SMUD, Haidar S, Hassan HM, Khan MKR. Genomic Dynamics and Functional Insights under Salt Stress in Gossypium hirsutum L. Genes (Basel) 2023; 14:1103. [PMID: 37239463 PMCID: PMC10218025 DOI: 10.3390/genes14051103] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/07/2022] [Revised: 04/25/2023] [Accepted: 04/26/2023] [Indexed: 05/28/2023] Open
Abstract
The changing climate is intensifying salt stress globally. Salt stress is a menace to cotton crop quality and yield. The seedling, germination, and emergence phases are more prone to the effects of salt stress than other stages. Higher levels of salt can lead to delayed flowering, a reduced number of fruiting positions, shedding of fruits, decreased boll weight, and yellowing of fiber, all of which have an adverse effect on the yield and quality of the seed cotton. However, sensitivity toward salt stress is dependent on the salt type, cotton growth phase, and genotype. As the threat of salt stress continues to grow, it is crucial to gain a comprehensive understanding of the mechanisms underlying salt tolerance in plants and to identify potential avenues for enhancing the salt tolerance of cotton. The emergence of marker-assisted selection, in conjunction with next-generation sequencing technologies, has streamlined cotton breeding efforts. This review begins by providing an overview of the causes of salt stress in cotton, as well as the underlying theory of salt tolerance. Subsequently, it summarizes the breeding methods that utilize marker-assisted selection, genomic selection, and techniques for identifying elite salt-tolerant markers in wild species or mutated materials. Finally, novel cotton breeding possibilities based on the approaches stated above are presented and debated.
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Affiliation(s)
- Zunaira Anwar
- Nuclear Institute for Agriculture and Biology College (NIAB-C), Pakistan Institute of Engineering and Applied Sciences (PIEAS), Islamabad 45650, Pakistan; (Z.A.); (A.I.); (A.D.); (S.M.-U.-D.K.); (S.H.); (H.M.H.)
| | - Aqsa Ijaz
- Nuclear Institute for Agriculture and Biology College (NIAB-C), Pakistan Institute of Engineering and Applied Sciences (PIEAS), Islamabad 45650, Pakistan; (Z.A.); (A.I.); (A.D.); (S.M.-U.-D.K.); (S.H.); (H.M.H.)
| | - Allah Ditta
- Nuclear Institute for Agriculture and Biology College (NIAB-C), Pakistan Institute of Engineering and Applied Sciences (PIEAS), Islamabad 45650, Pakistan; (Z.A.); (A.I.); (A.D.); (S.M.-U.-D.K.); (S.H.); (H.M.H.)
- Nuclear Institute for Agriculture and Biology (NIAB), Faisalabad 38000, Pakistan
| | - Baohua Wang
- School of Life Sciences, Nantong University, Nantong 226000, China
| | - Fang Liu
- State Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Science, Anyang 455000, China;
| | - Sana Muhy-Ud-Din Khan
- Nuclear Institute for Agriculture and Biology College (NIAB-C), Pakistan Institute of Engineering and Applied Sciences (PIEAS), Islamabad 45650, Pakistan; (Z.A.); (A.I.); (A.D.); (S.M.-U.-D.K.); (S.H.); (H.M.H.)
| | - Sajjad Haidar
- Nuclear Institute for Agriculture and Biology College (NIAB-C), Pakistan Institute of Engineering and Applied Sciences (PIEAS), Islamabad 45650, Pakistan; (Z.A.); (A.I.); (A.D.); (S.M.-U.-D.K.); (S.H.); (H.M.H.)
- Nuclear Institute for Agriculture and Biology (NIAB), Faisalabad 38000, Pakistan
| | - Hafiz Mumtaz Hassan
- Nuclear Institute for Agriculture and Biology College (NIAB-C), Pakistan Institute of Engineering and Applied Sciences (PIEAS), Islamabad 45650, Pakistan; (Z.A.); (A.I.); (A.D.); (S.M.-U.-D.K.); (S.H.); (H.M.H.)
- Nuclear Institute for Agriculture and Biology (NIAB), Faisalabad 38000, Pakistan
| | - Muhammad Kashif Riaz Khan
- Nuclear Institute for Agriculture and Biology College (NIAB-C), Pakistan Institute of Engineering and Applied Sciences (PIEAS), Islamabad 45650, Pakistan; (Z.A.); (A.I.); (A.D.); (S.M.-U.-D.K.); (S.H.); (H.M.H.)
- Nuclear Institute for Agriculture and Biology (NIAB), Faisalabad 38000, Pakistan
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14
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Abd-El-Aty MS, Abo-Youssef MI, Bahgt MM, Ibrahim OM, Faltakh H, Nouri H, Korany SM, Alsherif EA, AbdElgawad H, El-Tahan AM. Mode of gene action and heterosis for physiological, biochemical, and agronomic traits in some diverse rice genotypes under normal and drought conditions. FRONTIERS IN PLANT SCIENCE 2023; 14:1108977. [PMID: 37063192 PMCID: PMC10103692 DOI: 10.3389/fpls.2023.1108977] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/26/2022] [Accepted: 02/20/2023] [Indexed: 06/19/2023]
Abstract
Water scarcity is a crucial environmental stress that constrains rice growth and production. Thus, breeding for developing high-yielding and drought-tolerant rice genotypes is decisive in sustaining rice production and ensuring global food security, particularly under stress conditions. To this end, this study was conducted to evaluate the effects of water deficit on 31 genotypes of rice (seven lines, viz., Puebla, Hispagran, IET1444, WAB1573, Giza177, Sakha101, and Sakha105, and three testers, viz., Sakha106, Sakha107, and Sakha108) and their 21 crosses produced by line × tester mating design under normal and water deficit conditions; this was to estimate the combining ability, heterosis, and gene action for some traits of physiological, biochemical, and yield components. This study was performed during the summer seasons of 2017 and 2018. The results showed that water deficit significantly decreased relative water content, total chlorophyll content, grain yield, and several yield attributes. However, osmolyte (proline) content and antioxidant enzyme activities (CAT and APX) were significantly increased compared with the control condition. Significant mean squares were recorded for the genotypes and their partitions under control and stress conditions, except for total chlorophyll under normal irrigation. Significant differences were also detected among the lines, testers, and line × tester for all the studied traits under both irrigation conditions. The value of the σ²GCA variance was less than the value of the σ²SCA variance for all the studied traits. In addition, the dominance genetic variance (σ2D) was greater than the additive genetic variance (σ2A) in controlling the inheritance of all the studied traits under both irrigation conditions; this reveals that the non-additive gene effects played a significant role in the genetic expression of the studied traits. The two parental genotypes (Puebla and Hispagran) were identified as good combiners for most physiological and biochemical traits, earliness, shortness, grain yield, and 1,000-grains weight traits. Additionally, the cross combinations Puebla × Sakha107, Hispagran × Sakha108, and Giza177 × Sakha107 were the most promising. These results demonstrated the substantial and desirable specific combining ability effects on all the studied traits, which suggested that it could be considered for use in rice hybrid breeding programs.
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Affiliation(s)
- Mohamed S. Abd-El-Aty
- Agronomy Department, Faculty of Agriculture, Kafr El-Sheikh University, Kafr El-Sheikh, Egypt
| | - Mahmoud I. Abo-Youssef
- Rice Research and Training Center, Field Crops Research Institute, Agricultural Research Center, Egypt
| | - Mohamed M. Bahgt
- Agronomy Department, Faculty of Agriculture, Kafr El-Sheikh University, Kafr El-Sheikh, Egypt
| | - Omar M. Ibrahim
- Plant Production Department, Arid Lands Cultivation Research Institute, The City of Scientific Research and Technological Applications, SRTA-City, Borg El Arab, Alexandria, Egypt
| | - Hana Faltakh
- Department of Basic Sciences, Deanship of Preparatory Year and Supporting Studies, Imam Abdulrahman Bin Faisal University, P.O. Box 1982, Dammam, 34212, Saudi Arabia
| | - Hela Nouri
- Department of Basic Sciences, Deanship of Preparatory Year and Supporting Studies, Imam Abdulrahman Bin Faisal University, P.O. Box 1982, Dammam, 34212, Saudi Arabia
| | - Shereen Magdy Korany
- Department of Biology, College of Science, Princess Nourah bint Abdulrahman University, P.O. Box 84428, Riyadh 11671, Saudi Arabia
| | - Emad A. Alsherif
- Biology Department, College of Science and Arts at Khulis, University of Jeddah, Jeddah 21959, Saudi Arabia
- Botany and Microbiology Department, Faculty of Science, Beni-Suef University, Beni‒Suef 62521, Egypt
| | - Hamada AbdElgawad
- Botany and Microbiology Department, Faculty of Science, Beni-Suef University, Beni‒Suef 62521, Egypt
| | - Amira M. El-Tahan
- Plant Production Department, Arid Lands Cultivation Research Institute, The City of Scientific Research and Technological Applications, SRTA-City, Borg El Arab, Alexandria, Egypt
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15
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Oğuz MÇ, Oğuz E, Güler M. Seed priming with essential oils for sustainable wheat agriculture in semi-arid region. PeerJ 2023; 11:e15126. [PMID: 37009155 PMCID: PMC10062347 DOI: 10.7717/peerj.15126] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2022] [Accepted: 03/04/2023] [Indexed: 03/29/2023] Open
Abstract
Drought is one of the major constraints to global crop production. A number of sustainable systems have focused on the development of environmentally friendly innovative biotechnological interventions to prevent yield losses. The use of essential oils as a seed priming agent can make an important contribution as a natural stimulant in increasing drought stress tolerance. This study focuses on the effects of seeds coated with different doses (D0 (0%), D1 (0.01%), D2 (0.05%), D3 (0.10%) and D4 (0.25%)) of sage, rosemary and lavender essential oils on wheat germination, seedling establishment and yield parameters. Turkey’s local wheat genotype Köse was used as plant material. The impact of the seed priming on germination rate, coleoptile length, shoot length, root length, shoot fresh and dry weight, root fresh and dry weight, relative water content (RWC), proline, and chlorophyll contents was assessed in laboratory experiments. In addition, the effect of essential oil types on yield parameters and agronomic components (plant height, spike height, number of grains per spike, grain yield per spike, grain yield per unit area, thousand-grain weight) was evaluated in a field experiment during the 2019–2020 crop seasons in a semi-arid climate. According to laboratory results, the highest germination rate among all treatment doses was determined in the D2 treatment (rosemary 93.30%, sage 94.00% and lavender 92.50%), while the lowest germination rates for all essential oil types were determined in the D4 treatment (rosemary 41.70%, sage 40.90% and lavender 40.90%). Increasing treatment doses showed a similar suppressive effect on the other parameters. In the field experiment, the highest grain yield (256.52 kg/da) and thousand-grain weight (43.30 g) were determined in the rosemary treatment. However, the priming treatment has an insignificant on the number of grains per spike and the spike length. The light of these results, the effects of essential oil types and doses on yield parameters were discussed. The findings highlight the importance of using essential oils in seed priming methods for sustainable agricultural practices.
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16
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Ltaief S, Krouma A. Functional Dissection of the Physiological Traits Promoting Durum Wheat ( Triticum durum Desf.) Tolerance to Drought Stress. PLANTS (BASEL, SWITZERLAND) 2023; 12:1420. [PMID: 37050046 PMCID: PMC10096688 DOI: 10.3390/plants12071420] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/28/2022] [Revised: 02/09/2023] [Accepted: 03/03/2023] [Indexed: 06/19/2023]
Abstract
In Tunisia's arid and semi-arid lands, drought stress remains the most critical factor limiting agricultural production due to low and irregular precipitation. The situation is even more difficult because of the scarcity of underground water for irrigation and the climate change that has intensified and expanded the aridity. One of the most efficient and sustainable approaches to mitigating drought stress is exploring genotypic variability to screen tolerant genotypes and identify useful tolerance traits. To this end, six Tunisian wheat genotypes (Triticum durum Desf.) were cultivated in the field, under a greenhouse and natural light, to be studied for their differential tolerance to drought stress. Many morpho-physiological and biochemical traits were analyzed, and interrelationships were established. Depending on the genotypes, drought stress significantly decreased plant growth, chlorophyll biosynthesis, and photosynthesis; stimulated osmolyte accumulation and disturbed water relations. The most tolerant genotypes (salim and karim) accumulated more potassium (K) and proline in their shoots, allowing them to maintain better tissue hydration and physiological functioning. The osmotic adjustment (OA), in which potassium and proline play a key role, determines wheat tolerance to drought stress. The calculated drought index (DI), drought susceptible index (DSI), drought tolerance index (DTI), K use efficiency (KUE), and water use efficiency (WUE) discriminated the studied genotypes and confirmed the relative tolerance of salim and karim.
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Affiliation(s)
- Salim Ltaief
- Faculty of Sciences of Gafsa, Sidi Ahmed Zarroug, Gafsa 2112, Tunisia
- Faculty of Sciences and Techniques, Sidi Bouzid 9100, Tunisia
| | - Abdelmajid Krouma
- Faculty of Sciences and Techniques, Sidi Bouzid 9100, Tunisia
- Faculty of Sciences of Sfax, Road la Soukra km 4-BP, Sfax 1171-3000, Tunisia
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17
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Dvojković K, Plavšin I, Novoselović D, Šimić G, Lalić A, Čupić T, Horvat D, Viljevac Vuletić M. Early Antioxidative Response to Desiccant-Stimulated Drought Stress in Field-Grown Traditional Wheat Varieties. PLANTS (BASEL, SWITZERLAND) 2023; 12:249. [PMID: 36678962 PMCID: PMC9867156 DOI: 10.3390/plants12020249] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/16/2022] [Revised: 12/26/2022] [Accepted: 01/02/2023] [Indexed: 06/17/2023]
Abstract
Extended drought affects the production and quality of wheat (Triticum aestivum L.), one of the world's most important food crops. Breeding for increased drought resistance is becoming increasingly important due to the rising demand for food production. Four old traditional Croatian wheat cultivars were used in the present study to examine the early antioxidant response of flag leaves to desiccant-stimulated drought stress and to identify drought-tolerant cultivars accordingly. The results indicate that the enzymatic antioxidant system plays the most significant role in the early response of adult wheat plants to drought stress and the removal of excessive H2O2, particularly GPOD and APX. Nada and Dubrava cultivars revealed the strongest activation of the enzymatic defense mechanism, which prevented H2O2 accumulation and lipid peroxidation. Additionally, the Nada cultivar also showed increased synthesis of proline and specific phenolic compounds, which both contribute to the increased stress tolerance. Among the cultivars investigated, cultivar Nada has the broadest genetic base, which may explain why it possesses the ability to activate both enzymatic and non-enzymatic defense mechanisms in an early response to drought stress. This suggests that old traditional wheat cultivars with broad genetic bases can be a valuable source of drought tolerance, which is especially important given the current climate change.
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Affiliation(s)
- Krešimir Dvojković
- Agricultural Institute Osijek, Južno Predgrađe 17, 31000 Osijek, Croatia
| | - Ivana Plavšin
- Agricultural Institute Osijek, Južno Predgrađe 17, 31000 Osijek, Croatia
- Centre of Excellence for Biodiversity and Molecular Plant Breeding (CoE CroP-BioDiv), Svetošimunska Cesta 25, 10000 Zagreb, Croatia
| | - Dario Novoselović
- Agricultural Institute Osijek, Južno Predgrađe 17, 31000 Osijek, Croatia
- Centre of Excellence for Biodiversity and Molecular Plant Breeding (CoE CroP-BioDiv), Svetošimunska Cesta 25, 10000 Zagreb, Croatia
| | - Gordana Šimić
- Agricultural Institute Osijek, Južno Predgrađe 17, 31000 Osijek, Croatia
| | - Alojzije Lalić
- Agricultural Institute Osijek, Južno Predgrađe 17, 31000 Osijek, Croatia
| | - Tihomir Čupić
- Agricultural Institute Osijek, Južno Predgrađe 17, 31000 Osijek, Croatia
| | - Daniela Horvat
- Agricultural Institute Osijek, Južno Predgrađe 17, 31000 Osijek, Croatia
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18
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Verbeke S, Padilla-Díaz CM, Martínez-Arias C, Goossens W, Haesaert G, Steppe K. Mechanistic modeling reveals the importance of turgor-driven apoplastic water transport in wheat stem parenchyma during carbohydrate mobilization. THE NEW PHYTOLOGIST 2023; 237:423-440. [PMID: 36259090 DOI: 10.1111/nph.18547] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/09/2022] [Accepted: 10/03/2022] [Indexed: 06/16/2023]
Abstract
During stem elongation, wheat (Triticum aestivum) increases its stem carbohydrate content before anthesis as a reserve for grain filling. Hydraulic functioning during this mobilization process is not well understood, and contradictory results exist on the direct effect of drought on carbohydrate mobilization. In a dedicated experiment, wheat plants were subjected to drought stress during carbohydrate mobilization. Measurements, important to better understand stem physiology, showed some unexpected patterns that could not be explained by our current knowledge on water transport. Traditional water flow and storage models failed to properly describe the drought response in wheat stems during carbohydrate mobilization. To explain the measured patterns, hypotheses were formulated and integrated in a dedicated model for wheat. The new mechanistic model simulates two hypothetical water storage compartments: one where water is quickly exchanged with the xylem and one that contains the carbohydrate storage. Water exchange between these compartments is turgor-driven. The model was able to simulate the measured increase in stored carbohydrate concentrations with a decrease in water content and stem diameter. Calibration of the model showed the importance of turgor-driven apoplastic water flow during carbohydrate mobilization. This resulted in an increase in stem hydraulic capacitance, which became more important under drought stress.
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Affiliation(s)
- Sarah Verbeke
- Laboratory of Plant Ecology, Department of Plants and Crops, Faculty of Bioscience Engineering, Ghent University, Coupure Links 653, B-9000, Ghent, Belgium
| | - Carmen María Padilla-Díaz
- Laboratory of Plant Ecology, Department of Plants and Crops, Faculty of Bioscience Engineering, Ghent University, Coupure Links 653, B-9000, Ghent, Belgium
| | - Clara Martínez-Arias
- Departamento de Sistemas y Recursos Naturales, ETSI Montes, Forestal y del Medio Natural, Universidad Politécnica de Madrid, 28040, Madrid, Spain
| | - Willem Goossens
- Laboratory of Plant Ecology, Department of Plants and Crops, Faculty of Bioscience Engineering, Ghent University, Coupure Links 653, B-9000, Ghent, Belgium
| | - Geert Haesaert
- Department of Plants and Crops, Faculty of Bioscience Engineering, Ghent University, Coupure Links 653, B-9000, Ghent, Belgium
| | - Kathy Steppe
- Laboratory of Plant Ecology, Department of Plants and Crops, Faculty of Bioscience Engineering, Ghent University, Coupure Links 653, B-9000, Ghent, Belgium
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19
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Quagliata G, Abdirad S, Celletti S, Sestili F, Astolfi S. Screening of Triticum turgidum genotypes for tolerance to drought stress. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2023; 194:271-280. [PMID: 36442359 DOI: 10.1016/j.plaphy.2022.11.025] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/15/2022] [Revised: 11/14/2022] [Accepted: 11/19/2022] [Indexed: 06/16/2023]
Abstract
Drought is one of the major abiotic stresses leading to reduced yields and economic losses. Effective germplasm screening for drought tolerance particularly under managed water-deficit conditions is an effective way of selecting materials for advanced breeding programs. Here, 37 Triticum turgidum genotypes, including landraces, ancient and modern genotypes, along with 2 tritordeum cultivars, were subjected to water-deficit stress through the application of 10% (w/v) PEG 6000 and to re-watering treatment in controlled environment, and at the end of each treatment, several physiological and morphological traits were investigated. Our results revealed large variation in shoot and root fresh weight, proline, chlorophyll, and MDA concentration, and also in root morphological traits across the 37 genotypes. The hierarchical clustering of the physiological and morphological traits led to the identification of tolerant and sensitive genotypes to water-deficit stress and also reveals those genotypes characterized by deep-rooting and shallow-rooting systems. By integrating both datasets, three outstanding genotypes, namely Karim, Svems 20, and Svems 18 were identified as the most tolerant genotypes with deep-rooting system. On the other hand, Iride and Bulel tritordeum, were introduced as the most sensitive genotypes with shallow-rooting system.
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Affiliation(s)
- G Quagliata
- Department of Agricultural and Forestry Sciences (DAFNE), University of Tuscia, Viterbo, Italy
| | - S Abdirad
- Department of Agricultural and Forestry Sciences (DAFNE), University of Tuscia, Viterbo, Italy
| | - S Celletti
- Department of Agricultural and Forestry Sciences (DAFNE), University of Tuscia, Viterbo, Italy
| | - F Sestili
- Department of Agricultural and Forestry Sciences (DAFNE), University of Tuscia, Viterbo, Italy
| | - S Astolfi
- Department of Agricultural and Forestry Sciences (DAFNE), University of Tuscia, Viterbo, Italy.
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20
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Poggi GM, Corneti S, Aloisi I, Ventura F. Environment-oriented selection criteria to overcome controversies in breeding for drought resistance in wheat. JOURNAL OF PLANT PHYSIOLOGY 2023; 280:153895. [PMID: 36529076 DOI: 10.1016/j.jplph.2022.153895] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/14/2022] [Revised: 11/17/2022] [Accepted: 12/05/2022] [Indexed: 06/17/2023]
Abstract
Wheat is one of the most important cereal crops, representing a fundamental source of calories and protein for the global human population. Drought stress (DS) is a widespread phenomenon, already affecting large wheat-growing areas worldwide, and a major threat for cereal productivity, resulting in consistent losses in average grain yield (GY). Climate change is projected to exacerbate DS incidence and severity by increasing temperatures and changing rainfall patterns. Estimating that wheat production has to substantially increase to guarantee food security to a demographically expanding human population, the need for breeding programs focused on improving wheat drought resistance is manifest. Drought occurrence, in terms of time of appearance, duration, frequency, and severity, along the plant's life cycle varies significantly among different environments and different agricultural years, making it difficult to identify reliable phenological, morphological, and functional traits to be used as effective breeding tools. The situation is further complicated by the presence of confounding factors, e.g., other concomitant abiotic stresses, in an open-field context. Consequently, the relationship between morpho-functional traits and GY under water deficit is often contradictory; moreover, controversies have emerged not only on which traits are to be preferred, but also on how one specific trait should be desired. In this review, we attempt to identify the possible causes of these disputes and propose the most suitable selection criteria in different target environments and, thus, the best trait combinations for breeders in different drought contexts. In fact, an environment-oriented approach could be a valuable solution to overcome controversies in identifying the proper selection criteria for improving wheat drought resistance.
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Affiliation(s)
- Giovanni Maria Poggi
- Department of Biological, Geological and Environmental Sciences (BiGeA), Alma Mater Studiorum, University of Bologna, Bologna, Italy; Department of Agricultural and Food Sciences (DISTAL), Alma Mater Studiorum, University of Bologna, Bologna, Italy
| | - Simona Corneti
- Department of Biological, Geological and Environmental Sciences (BiGeA), Alma Mater Studiorum, University of Bologna, Bologna, Italy
| | - Iris Aloisi
- Department of Biological, Geological and Environmental Sciences (BiGeA), Alma Mater Studiorum, University of Bologna, Bologna, Italy.
| | - Francesca Ventura
- Department of Agricultural and Food Sciences (DISTAL), Alma Mater Studiorum, University of Bologna, Bologna, Italy
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21
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Sanwal SK, Kesh H, Kumar A, Dubey BK, Khar A, Rouphael Y, Kumar P. Salt Tolerance Potential in Onion: Confirmation through Physiological and Biochemical Traits. PLANTS (BASEL, SWITZERLAND) 2022; 11:3325. [PMID: 36501363 PMCID: PMC9739851 DOI: 10.3390/plants11233325] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/04/2022] [Revised: 11/22/2022] [Accepted: 11/29/2022] [Indexed: 06/17/2023]
Abstract
Production of many crops, including onion, under salinity is lagging due to limited information on the physiological, biochemical and molecular mechanisms of salt stress tolerance in plants. Hence, the present study was conducted to identify salt-tolerant onion genotypes based on physiological and biochemical mechanisms associated with their differential responses. Thirty-six accessions were evaluated under control and salt stress conditions, and based on growth and bulb yield. Results revealed that plant height (6.07%), number of leaves per plant (3.07%), bulb diameter (11.38%), bulb yield per plant (31.24%), and total soluble solids (8.34%) were reduced significantly compared to control. Based on percent bulb yield reduction, seven varieties were classified as salt tolerant (with <20% yield reduction), seven as salt-sensitive (with >40% yield reduction) and the remaining as moderately tolerant (with 20 to 40% yield reduction). Finally, seven salt-tolerant and seven salt-sensitive accessions were selected for detailed study of their physiological and biochemical traits and their differential responses under salinity. High relative water content (RWC), membrane stability index (MSI), proline content (PRO), and better antioxidants such as super oxide dismutase (SOD), peroxidase (POX), catalase (CAT), and ascorbate peroxidase (APX) were observed in tolerant accessions, viz. POS35, NHRDF Red (L-28), GWO 1, POS36, NHRDF Red-4 (L-744), POS37, and POS38. Conversely, increased malondialdehyde (MDA) and hydrogen peroxide (H2O2) content, reduced activity of antioxidants, more membrane injury, and high Na+/K+ ratio were observed in sensitive accessions, viz. ALR, GJWO 3, Kalyanpur Red Round, NHRDF Red-3 (L-652), Agrifound White, and NHRDF (L-920). Stepwise regression analysis identified bulb diameter), plant height, APX, stomatal conductance (gS), POX, CAT, MDA, MSI, and bulb Na+/K+ ratio as predictor traits accounting for maximum variation in bulb yield under salinity. The identified seven salt-tolerant varieties can be used in future onion breeding programs for developing tolerant genotypes for salt-prone areas.
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Affiliation(s)
| | - Hari Kesh
- ICAR—Central Soil Salinity Research Institute, Karnal 132001, India
| | - Arvind Kumar
- ICAR—Central Soil Salinity Research Institute, Karnal 132001, India
| | - Bhanu Kumar Dubey
- National Horticultural Research and Development Foundation, Karnal 132001, India
| | - Anil Khar
- ICAR—Indian Agricultural Research Institute, New Delhi 110012, India
| | - Youssef Rouphael
- Department of Agricultural Sciences, University of Naples Federico II, 80055 Portici, Italy
| | - Pradeep Kumar
- ICAR—Central Arid Zone Research Institute, Jodhpur 342003, India
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22
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Potentials of synthetic hexaploid wheats to improve drought tolerance. Sci Rep 2022; 12:20482. [PMID: 36443382 PMCID: PMC9705419 DOI: 10.1038/s41598-022-24678-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/02/2022] [Accepted: 11/18/2022] [Indexed: 11/29/2022] Open
Abstract
Synthetic hexaploid wheat-derived lines (SHW-DL) offers new hope for breeders to restore genes lost during the evolutionary bottleneck. The study of adaptability, variation, and the possibility of selection in SHW-DL for drought tolerance is poorly understood in arid environments. The potential of 184 SHW-DL and their variation for agro-morphological traits were assessed under normal and water stress conditions for 2 years. The mean values of grain yield (YLD) varied from 683.9 g/m2 (water stress) to 992.1 g/m2 (normal conditions). Grain yield decreased by 64 and 71% under water stress in the two growing seasons. High genotypic variation was found for measured traits and drought tolerance. Heritability ranged from 19 (harvest index) to 47% (spike length), whereas grain yield indicated a moderate heritability (32%). Using the assessment of the interrelationship of traits, hectoliter (a quality trait) was correlated with drought tolerance and stability indices. Therefore, it can be considered as an important trait to select drought tolerant genotypes. In the following, the priority of yield components entering the regression model was different in two moisture conditions suggesting different strategies in indirect selection programs to improve yield. Spike m-2 and grain spike-1 indirectly and negatively affected yield through thousand-grain weight (TGW) under normal and water stress conditions, respectively. Furthermore, SHW-DL compared to ordinary wheat were significantly superior in terms of early maturity, dwarfing, yield, TGW, stem diameter, and harvest index. Overall, our findings suggest that SHW-DL are a valuable source for improving wheat yield and drought tolerance, and indirect selection might be possible to improve these complex traits.
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23
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Ashfaq W, Brodie G, Fuentes S, Gupta D. Infrared Thermal Imaging and Morpho-Physiological Indices Used for Wheat Genotypes Screening under Drought and Heat Stress. PLANTS (BASEL, SWITZERLAND) 2022; 11:3269. [PMID: 36501309 PMCID: PMC9739054 DOI: 10.3390/plants11233269] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/22/2022] [Revised: 11/20/2022] [Accepted: 11/21/2022] [Indexed: 06/17/2023]
Abstract
Bread wheat, one of the largest broadacre crops, often experiences various environmental stresses during critical growth stages. Terminal drought and heat stress are the primary causes of wheat yield reduction worldwide. This study aimed to determine the drought and heat stress tolerance level of a group of 46 diverse wheat genotypes procured from the Australian Grains Gene Bank, Horsham, VIC Australia. Two separate drought stress (DS) and heat stress (HS) pot experiments were conducted in separate growth chambers. Ten days after complete anthesis, drought (40 ± 3% field capacity for 14 days) and heat stress (36/22 °C for three consecutive days) were induced. A significant genotype × environment interaction was observed and explained by various morpho-physiological traits, including rapid, non-destructive infrared thermal imaging for computational water stress indices. Except for a spike length in DS and harvest index in HS, the analysis of variance showed significant differences for all the recorded traits. Results showed grains per spike, grains weight per spike, spike fertility, delayed flag leaf senescence, and cooler canopy temperature were positively associated with grain yield under DS and HS. The flag leaf senescence and chlorophyll fluorescence were used to measure each genotype's stay-green phenotype and photosystem II activity after DS and HS. This study identified the top ten best and five lowest-performing genotypes from drought and heat stress experiments based on their overall performance. Results suggest that if heat or drought adaptive traits are brought together in a single genotype, grain yield can be improved further, particularly in a rainfed cropping environment.
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Affiliation(s)
- Waseem Ashfaq
- School of Agriculture and Food, Faculty of Veterinary and Agricultural Sciences, The University of Melbourne, Melbourne, VIC 3010, Australia
| | - Graham Brodie
- College of Science and Engineering, James Cook University, Townsville, QLD 4811, Australia
| | - Sigfredo Fuentes
- School of Agriculture and Food, Faculty of Veterinary and Agricultural Sciences, The University of Melbourne, Melbourne, VIC 3010, Australia
| | - Dorin Gupta
- School of Agriculture and Food, Faculty of Veterinary and Agricultural Sciences, The University of Melbourne, Melbourne, VIC 3010, Australia
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24
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Guo C, Liu L, Sun H, Wang N, Zhang K, Zhang Y, Zhu J, Li A, Bai Z, Liu X, Dong H, Li C. Predicting F v /F m and evaluating cotton drought tolerance using hyperspectral and 1D-CNN. FRONTIERS IN PLANT SCIENCE 2022; 13:1007150. [PMID: 36330250 PMCID: PMC9623111 DOI: 10.3389/fpls.2022.1007150] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/30/2022] [Accepted: 09/06/2022] [Indexed: 06/16/2023]
Abstract
The chlorophyll fluorescence parameter Fv/Fm is significant in abiotic plant stress. Current acquisition methods must deal with the dark adaptation of plants, which cannot achieve rapid, real-time, and high-throughput measurements. However, increased inputs on different genotypes based on hyperspectral model recognition verified its capabilities of handling large and variable samples. Fv/Fm is a drought tolerance index reflecting the best drought tolerant cotton genotype. Therefore, Fv/Fm hyperspectral prediction of different cotton varieties, and drought tolerance evaluation, are worth exploring. In this study, 80 cotton varieties were studied. The hyperspectral cotton data were obtained during the flowering, boll setting, and boll opening stages under normal and drought stress conditions. Next, One-dimensional convolutional neural networks (1D-CNN), Categorical Boosting (CatBoost), Light Gradient Boosting Machines (LightBGM), eXtreme Gradient Boosting (XGBoost), Decision Trees (DT), Random Forests (RF), Gradient elevation decision trees (GBDT), Adaptive Boosting (AdaBoost), Extra Trees (ET), and K-Nearest Neighbors (KNN) were modeled with F v /F m. The Savitzky-Golay + 1D-CNN model had the best robustness and accuracy (RMSE = 0.016, MAE = 0.009, MAPE = 0.011). In addition, the F v /F m prediction drought tolerance coefficient and the manually measured drought tolerance coefficient were similar. Therefore, cotton varieties with different drought tolerance degrees can be monitored using hyperspectral full band technology to establish a 1D-CNN model. This technique is non-destructive, fast and accurate in assessing the drought status of cotton, which promotes smart-scale agriculture.
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Affiliation(s)
- Congcong Guo
- State Key Laboratory of North China Crop Improvement and Regulation/Key Laboratory of Crop Growth Regulation of Hebei Province/College of Agronomy, Hebei Agricultural University, Baoding, China
| | - Liantao Liu
- State Key Laboratory of North China Crop Improvement and Regulation/Key Laboratory of Crop Growth Regulation of Hebei Province/College of Agronomy, Hebei Agricultural University, Baoding, China
| | - Hongchun Sun
- State Key Laboratory of North China Crop Improvement and Regulation/Key Laboratory of Crop Growth Regulation of Hebei Province/College of Agronomy, Hebei Agricultural University, Baoding, China
| | - Nan Wang
- State Key Laboratory of North China Crop Improvement and Regulation/Key Laboratory of Crop Growth Regulation of Hebei Province/College of Agronomy, Hebei Agricultural University, Baoding, China
- Institute of Cereal and Oil Crops, Hebei Academy of Agriculture and Forestry Sciences, Shijiazhuang, China
| | - Ke Zhang
- State Key Laboratory of North China Crop Improvement and Regulation/Key Laboratory of Crop Growth Regulation of Hebei Province/College of Agronomy, Hebei Agricultural University, Baoding, China
| | - Yongjiang Zhang
- State Key Laboratory of North China Crop Improvement and Regulation/Key Laboratory of Crop Growth Regulation of Hebei Province/College of Agronomy, Hebei Agricultural University, Baoding, China
| | - Jijie Zhu
- Cotton Research Center, Shandong Key Lab for Cotton Culture and Physiology, Shandong Academy of Agricultural Sciences, Jinan, China
| | - Anchang Li
- State Key Laboratory of North China Crop Improvement and Regulation/Key Laboratory of Crop Growth Regulation of Hebei Province/College of Agronomy, Hebei Agricultural University, Baoding, China
| | - Zhiying Bai
- State Key Laboratory of North China Crop Improvement and Regulation/Key Laboratory of Crop Growth Regulation of Hebei Province/College of Agronomy, Hebei Agricultural University, Baoding, China
| | - Xiaoqing Liu
- State Key Laboratory of North China Crop Improvement and Regulation/Key Laboratory of Crop Growth Regulation of Hebei Province/College of Agronomy, Hebei Agricultural University, Baoding, China
| | - Hezhong Dong
- College of Mechanical and Electrical Engineering, Hebei Agricultural University, Baoding, Hebei, China
| | - Cundong Li
- State Key Laboratory of North China Crop Improvement and Regulation/Key Laboratory of Crop Growth Regulation of Hebei Province/College of Agronomy, Hebei Agricultural University, Baoding, China
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25
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Ahmed AAM, Dawood MFA, Elfarash A, Mohamed EA, Hussein MY, Börner A, Sallam A. Genetic and morpho-physiological analyses of the tolerance and recovery mechanisms in seedling stage spring wheat under drought stress. Front Genet 2022; 13:1010272. [PMID: 36303538 PMCID: PMC9593057 DOI: 10.3389/fgene.2022.1010272] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/02/2022] [Accepted: 09/07/2022] [Indexed: 11/16/2022] Open
Abstract
Drought is one of the complex abiotic stresses that affect the growth and production of wheat in arid and semiarid countries. In this study, a set of 172 diverse spring wheat genotypes from 20 different countries were assessed under drought stress at the seedling stage. Besides seedling length, two types of traits were recorded, namely: tolerance traits (days to wilting, leaf wilting, and the sum of leaf wilting), and recovery traits (days to regrowth, regrowth biomass, and drought survival rate). In addition, tolerance index, recovery index, and drought tolerance index (DTI) were estimated to select the most drought tolerant genotypes. Moreover, leaf protein content (P), amino acid (AM), proline content (PRO), glucose (G), fructose (F), and total soluble carbohydrates (TSC) were measured under control and drought conditions to study the changes in each physiological trait due to drought stress. All genotypes showed a high significant genetic variation in all the physio-morphological traits scored under drought stress. High phenotypic and genotypic correlations were found among all seedling morphological traits. Among the studied indices, the drought tolerance index (DTI) had the highest phenotypic and genotypic correlations with all tolerance and recovery traits. The broad-sense heritability (H2) estimates were high for morphological traits (83.85–92.27), while the physiological traits ranged from 96.41 to 98.68 under the control conditions and from 97.13 to 99.99 under drought stress. The averages of the physiological traits (proteins, amino acids, proline, glucose, fructose, and total soluble carbohydrates) denoted under drought stress were higher than those recorded under well-watered conditions except for proteins. In this regard, amino acids, glucose, and total soluble carbohydrates had a significant correlation with all morphological traits. The selection for drought tolerance revealed 10 tolerant genotypes from different countries (8 genotypes from Egypt, one from Morocco, and one from the United States). These selected genotypes were screened for the presence of nine specific TaDREB1 alleles. Six primers were polymorphic among the selected genotypes. Genetic diversity among the selected genotypes was investigated using 21,450 SNP markers. The results of the study shed light on the different mechanisms for drought tolerance that wheat plants use to tolerate and survive under drought stress. The genetic analysis performed in this study suggested the most suitable genotypes for selective breeding at the seedling stage under water deficit.
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Affiliation(s)
- Asmaa A. M. Ahmed
- Department of Genetics, Faculty of Agriculture, Assiut University, Assiut, Egypt
| | - Mona F. A. Dawood
- Department of Botany and Microbiology, Faculty of Science, Assiut University, Assiut, Egypt
| | - Ameer Elfarash
- Department of Genetics, Faculty of Agriculture, Assiut University, Assiut, Egypt
| | - Elsayed A. Mohamed
- Department of Genetics, Faculty of Agriculture, Assiut University, Assiut, Egypt
| | - Mohamed Y. Hussein
- Department of Genetics, Faculty of Agriculture, Assiut University, Assiut, Egypt
| | - Andreas Börner
- Resources Genetics and Reproduction, Department Genebank, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK), Gatersleben, Germany
| | - Ahmed Sallam
- Department of Genetics, Faculty of Agriculture, Assiut University, Assiut, Egypt
- Resources Genetics and Reproduction, Department Genebank, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK), Gatersleben, Germany
- *Correspondence: Ahmed Sallam, ,
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26
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Hassan A, Parveen A, Hussain S, Hussain I, Rasheed R. Investigating the role of different maize (Zea mays L.) cultivars by studying morpho-physiological attributes in chromium-stressed environment. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2022; 29:72886-72897. [PMID: 35614358 DOI: 10.1007/s11356-022-19398-2] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/01/2021] [Accepted: 02/20/2022] [Indexed: 06/15/2023]
Abstract
Because of global land surface warming, heavy metal toxicity is expected to occur more often and more intensely, affecting the growth and development of the major cereal crops such as maize (Zea mays L.) in several ways, thus affecting the production component of food security. Hence, it is important to know the best cultivars of Z. mays in abiotic stress environment to fulfill the market demand of this staple food. For this purpose, we investigate the present study to find the best Z. mays cultivar to be grown in chromium (Cr)-contaminated sand (200 µM). In this experiment, we have studied 10 cultivars (Malka, Sadaf, Pearl, CZP, YY, YH, MMRI-yellow, Sahiwal, EV-20, and EV-77) of Z. mays grown in plastic pots for 4 weeks (in addition with seed germination) under Cr - (0 µM) and Cr + (200 µM) in sand medium. Based on the findings of the current experiment, we illustrated that Cr toxicity induced a significant (P < 0.05) reduction in shoot length, root length, shoot fresh weight, root fresh weight, shoot dry weight and root dry weight, chlorophyll a, chlorophyll b, total chlorophyll, and carotenoid content and induced oxidative damage to membrane-bounded organelles by increasing the malondialdehyde and hydrogen peroxide which were manifested by flavonoid and phenolic contents. Moreover, Cr uptake was also higher in the plants grown in the Cr-contaminated sand compared to the plants grown without the Cr-contaminated sand. We also noticed that Pearl, CZP, and Sahiwal cultivars are suggested to be Cr-tolerant cultivars as showed better growth and development in Cr-contaminated sand while Sadaf, MMRI, and EV-77 showed lower growth and composition in Cr-contaminated sand. The overall pattern of Z. mays cultivars grown in Cr-contaminated sand is as follows: Pearl > CZP > Sahiwal > YY > YH > EV-20 > Malka > EV-77 > MMRI-yellow > Sadaf. Conclusively, it can be identified that when grown in Cr-contaminated sand, Pearl, CZP, and Sahiwal have greater ability to grow in polluted soils. Overall, Z. mays cultivars showed better growth in Cr-stressed environment due to defense mechanism but further experiments needed to be conducted on molecular level.
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Affiliation(s)
- Amara Hassan
- Department of Botany, Government College University, Allama Iqbal Road, Faisalabad, 38000, Pakistan
| | - Abida Parveen
- Department of Botany, Government College University, Allama Iqbal Road, Faisalabad, 38000, Pakistan.
| | - Saddam Hussain
- Department of Agronomy, University of Agriculture, Faisalabad, 38040, Punjab, Pakistan
| | - Iqbal Hussain
- Department of Botany, Government College University, Allama Iqbal Road, Faisalabad, 38000, Pakistan
| | - Rizwan Rasheed
- Department of Botany, Government College University, Allama Iqbal Road, Faisalabad, 38000, Pakistan
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27
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Harish MN, Choudhary AK, Bhupenchandra I, Dass A, Rajanna GA, Singh VK, Bana RS, Varatharajan T, Verma P, George S, Kashinath GT, Bhavya M, Chongtham SK, Devi EL, Kumar S, Devi SH, Bhutia TL. Double zero-tillage and foliar-P nutrition coupled with bio-inoculants enhance physiological photosynthetic characteristics and resilience to nutritional and environmental stresses in maize-wheat rotation. FRONTIERS IN PLANT SCIENCE 2022; 13:959541. [PMID: 36186084 PMCID: PMC9520575 DOI: 10.3389/fpls.2022.959541] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/01/2022] [Accepted: 08/22/2022] [Indexed: 06/16/2023]
Abstract
Conventionally tilled maize-wheat cropping system (MWCS) is an emerging cereal production system in semi-arid region of south-Asia. This system involves excessive tillage operations that result in numerous resource- and production-vulnerabilities besides impeding environmental-stresses. Likewise, phosphorus is a vital nutrient that limits crop growth and development. It's a matter of great concern when ∼80% of Indian soils are low to medium in available-P due to its sparing solubility, resulting in crop stress and low yields. Hence, crop productivity, photosynthetic parameters and resilience to nutritional and environmental stresses were assessed in a MWCS using four crop-establishment and tillage management (CETM) practices [FBCT-FBCT (Flat bed-conventional tillage both in maize and wheat); RBCT-RBZT (Raised bed-CT in maize and raised bed-zero tillage in wheat); FBZT-FBZT (FBZT both in maize and wheat); PRBZT-PRBZT (Permanent raised bed-ZT both in maize and wheat)], and five P-fertilization practices [P100 (100% soil applied-P); P50+2FSP (50% soil applied-P + 2 foliar-sprays of P through 2% DAP both in maize and wheat); P50+PSB+AM-fungi; P50+PSB+AMF+2FSP; and P0 (100% NK with no-P)] in split-plot design replicated-thrice. The results indicated that double zero-tilled PRBZT-PRBZT system significantly enhanced the grain yield (6.1; 5.4 t ha-1), net photosynthetic rate (Pn) (41.68; 23.33 μ mol CO2 m-2 s-1), stomatal conductance (SC) (0.44; 0.26 mol H2O m-2 s-1), relative water content (RWC) (83.3; 77.8%), and radiation-use efficiency (RUE) (2.9; 2.36 g MJ-1) by 12.8-15.8 and 8.5-44.4% in maize and wheat crops, respectively over conventional tilled FBCT-FBCT. P50+PSB+AMF+2FSP conjugating soil applied-P, microbial-inoculants and foliar-P, had significantly higher Pn, SC, RUE and RWC over P100 besides saving ∼34.7% fertilizer-P under MWCS. P50+PSB+AMF+2FSP practice also had higher NDVI, PAR, transpiration efficiency and PHI over P100. Whereas lower stomatal limitation index (Ls) was observed under PRBZT-PRBZT system as compared to the conventional FBCT-FBCT system indicating that P is the limiting factor but not stomata. Hence, optimum P supply through foliar P-fertilization along with other sources resulted in higher grain yield by 21.4% over control. Overall, double zero-tilled PRBZT-PRBZT with crop residue retention at 6 t/ha per year, as well as P50+PSB+AMF+2FSP in MWCS, may prove beneficial in enhancing the crop productivity and, thereby, bolstering food security in semi-arid south-Asia region.
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Affiliation(s)
- M. N. Harish
- Division of Agronomy, ICAR–Indian Agricultural Research Institute, New Delhi, India
- ICAR–Indian Institute of Horticultural Research, Farm Science Centre, Gonikoppal, India
| | - Anil K. Choudhary
- Division of Agronomy, ICAR–Indian Agricultural Research Institute, New Delhi, India
- Division of Crop Production, ICAR–Central Potato Research Institute, Shimla, India
| | - Ingudam Bhupenchandra
- ICAR–KVK, Tamenglong, ICAR Research Complex for NEH Region, Manipur Centre, Manipur, India
| | - Anchal Dass
- Division of Agronomy, ICAR–Indian Agricultural Research Institute, New Delhi, India
| | - G. A. Rajanna
- Division of Agronomy, ICAR–Indian Agricultural Research Institute, New Delhi, India
- ICAR–Directorate of Groundnut Research, Regional Station, Anantapur, India
| | - Vinod K. Singh
- Division of Agronomy, ICAR–Indian Agricultural Research Institute, New Delhi, India
- ICAR–Central Research Institute for Dryland Agriculture, Hyderabad, India
| | - R. S. Bana
- Division of Agronomy, ICAR–Indian Agricultural Research Institute, New Delhi, India
| | - T. Varatharajan
- Division of Agronomy, ICAR–Indian Agricultural Research Institute, New Delhi, India
| | - Parkash Verma
- Division of Agronomy, ICAR–Indian Agricultural Research Institute, New Delhi, India
- Agronomy Section, ICAR–National Dairy Research Institute, Karnal, India
| | - Saju George
- ICAR–Indian Institute of Horticultural Research, Farm Science Centre, Gonikoppal, India
| | - G. T. Kashinath
- Department of Agronomy, Mahatma Phule Krishi Vidyapeeth, Rahuri, India
| | - M. Bhavya
- Department of Agronomy, KSN University of Agricultural and Horticultural Sciences, Shivamogga, India
| | - S. K. Chongtham
- Multi Technology Testing Centre and Vocational Training Centre, CAEPHT, CAU, Ranipool, India
| | - E. Lamalakshmi Devi
- ICAR–Research Complex for North Eastern Region, Sikkim Centre, Tadong, India
| | - Sushil Kumar
- Division of Crop Production, ICAR–Central Potato Research Institute, Shimla, India
| | - Soibam Helena Devi
- Department of Crop Physiology, Assam Agricultural University, Jorhat, India
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Mabuza NM, Mavengahama S, Mokolobate M. Agronomic, Genetic and Quantitative Trait Characterization of Nightshade Accessions. PLANTS (BASEL, SWITZERLAND) 2022; 11:1489. [PMID: 35684262 PMCID: PMC9182925 DOI: 10.3390/plants11111489] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 04/20/2022] [Revised: 05/15/2022] [Accepted: 05/29/2022] [Indexed: 06/15/2023]
Abstract
Nightshades are among many underutilized and neglected African indigenous leafy vegetable (AILVs) species, and if adequately exploited, they could improve food, nutrition and income among the rural population. Morphological characterization of available accessions is key for the breeder to identify and select superior accessions as parents for utilization in breeding programs. Fifteen accessions of nightshade were evaluated for morpho-agronomic variation in an open field trial implemented in a randomized complete block design with three replicates across the two growing seasons. The accessions exhibited significant (p < 0.0001) differences in all quantitative traits. The data analysis showed that Scabrum (805.30 g/plant) followed by Ncampus (718.60 g/plant) produced the highest fresh leaf yield; for fruit fresh yield, the accession NigSN18 (1782.00 g/plant) recorded the highest, followed by ManTown (1507.90 g/plant). The accession N5547 had the tallest plants (66.83 cm), followed by accession Timbali (62.31 cm). The first four principal components (PCs) accounted for 86.82% of the total variation, which had an eigenvalue greater than 1. The cluster analysis grouped the accessions into 14 clusters based on their genetic similarity. Results of genetic studies revealed that phenotypic coefficient variation was higher than genotypic coefficient of variation for all parameters evaluated, indicating the environmental influence on the expression of these traits. Both GCV and PCV were higher for the largest leaf area, moderate to high for the remaining characters and low for leaf fresh yield per plant. High heritability coupled with genetic advance as a mean percentage (H2-70.59%, GAM-142.4%), indicating the presence of additive gene effects. Hence, selection can be employed for the improvement of this trait in nightshades. The study revealed sufficient genetic variability in the nightshade accessions, which can be exploited for crop improvement.
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Bapela T, Shimelis H, Tsilo TJ, Mathew I. Genetic Improvement of Wheat for Drought Tolerance: Progress, Challenges and Opportunities. PLANTS (BASEL, SWITZERLAND) 2022; 11:1331. [PMID: 35631756 PMCID: PMC9144332 DOI: 10.3390/plants11101331] [Citation(s) in RCA: 15] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/28/2022] [Revised: 04/27/2022] [Accepted: 05/04/2022] [Indexed: 06/01/2023]
Abstract
Wheat production and productivity are challenged by recurrent droughts associated with climate change globally. Drought and heat stress resilient cultivars can alleviate yield loss in marginal production agro-ecologies. The ability of some crop genotypes to thrive and yield in drought conditions is attributable to the inherent genetic variation and environmental adaptation, presenting opportunities to develop drought-tolerant varieties. Understanding the underlying genetic, physiological, biochemical, and environmental mechanisms and their interactions is key critical opportunity for drought tolerance improvement. Therefore, the objective of this review is to document the progress, challenges, and opportunities in breeding for drought tolerance in wheat. The paper outlines the following key aspects: (1) challenges associated with breeding for adaptation to drought-prone environments, (2) opportunities such as genetic variation in wheat for drought tolerance, selection methods, the interplay between above-ground phenotypic traits and root attributes in drought adaptation and drought-responsive attributes and (3) approaches, technologies and innovations in drought tolerance breeding. In the end, the paper summarises genetic gains and perspectives in drought tolerance breeding in wheat. The review will serve as baseline information for wheat breeders and agronomists to guide the development and deployment of drought-adapted and high-performing new-generation wheat varieties.
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Affiliation(s)
- Theresa Bapela
- African Centre for Crop Improvement, University of Kwa-Zulu Natal, Private Bag X01, Scottsville, Pietermaritzburg 3209, South Africa; (H.S.); (I.M.)
- Agricultural Research Council—Small Grain, Bethlehem 9700, South Africa;
| | - Hussein Shimelis
- African Centre for Crop Improvement, University of Kwa-Zulu Natal, Private Bag X01, Scottsville, Pietermaritzburg 3209, South Africa; (H.S.); (I.M.)
| | - Toi John Tsilo
- Agricultural Research Council—Small Grain, Bethlehem 9700, South Africa;
| | - Isack Mathew
- African Centre for Crop Improvement, University of Kwa-Zulu Natal, Private Bag X01, Scottsville, Pietermaritzburg 3209, South Africa; (H.S.); (I.M.)
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The regulatory role of γ-aminobutyric acid in chickpea plants depends on drought tolerance and water scarcity level. Sci Rep 2022; 12:7034. [PMID: 35487936 PMCID: PMC9054827 DOI: 10.1038/s41598-022-10571-8] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/29/2021] [Accepted: 03/31/2022] [Indexed: 11/10/2022] Open
Abstract
γ-Aminobutyric acid (GABA) is a non-protein amino acid with multifunctional roles in dynamic plant responses. To determine the effects of exogenous GABA application (0, 25 and 50 µM) on drought response, two chickpea cultivars with contrasting tolerance to water deficit were examined. Plants were exposed to four irrigation levels (irrigation to 100, 60, 40 and 20% field capacity). Water deficit decreased growth, chlorophyll content, and photosynthetic efficiency. It increased electrolyte leakage and lipid peroxidation owing to both higher ROS accumulation and lower antioxidant enzyme activity. These negative effects of water deficit and the alleviating role of GABA application were more prominent in the sensitive, as compared to the tolerant cultivar. Water deficit also increased proline and GABA contents more in the tolerant cultivar, whereas their content was more enhanced by GABA application in the sensitive one. This may confer an additional level of regulation that results in better alleviation of drought damage in tolerant chickpea cultivars. In conclusion, the stimulatory effect of GABA on growth and physiological modulation depends on both the water stress severity and the cultivar sensitivity to it, implying a probable unknown GABA-related mechanism established by tolerant chickpea cultivars; a lost or not gained mechanism in susceptible ones.
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Kamara MM, Rehan M, Mohamed AM, El Mantawy RF, Kheir AMS, Abd El-Moneim D, Safhi FA, ALshamrani SM, Hafez EM, Behiry SI, Ali MMA, Mansour E. Genetic Potential and Inheritance Patterns of Physiological, Agronomic and Quality Traits in Bread Wheat under Normal and Water Deficit Conditions. PLANTS (BASEL, SWITZERLAND) 2022; 11:plants11070952. [PMID: 35406932 PMCID: PMC9002629 DOI: 10.3390/plants11070952] [Citation(s) in RCA: 12] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/04/2022] [Revised: 03/26/2022] [Accepted: 03/28/2022] [Indexed: 05/26/2023]
Abstract
Water scarcity is a major environmental stress that adversatively impacts wheat growth, production, and quality. Furthermore, drought is predicted to be more frequent and severe as a result of climate change, particularly in arid regions. Hence, breeding for drought-tolerant and high-yielding wheat genotypes has become more decisive to sustain its production and ensure global food security with continuing population growth. The present study aimed at evaluating different parental bread wheat genotypes (exotic and local) and their hybrids under normal and drought stress conditions. Gene action controlling physiological, agronomic, and quality traits through half-diallel analysis was applied. The results showed that water-deficit stress substantially decreased chlorophyll content, photosynthetic efficiency (FV/Fm), relative water content, grain yield, and yield attributes. On the other hand, proline content, antioxidant enzyme activities (CAT, POD, and SOD), grain protein content, wet gluten content, and dry gluten content were significantly increased compared to well-watered conditions. The 36 evaluated genotypes were classified based on drought tolerance indices into 5 groups varying from highly drought-tolerant (group A) to highly drought-sensitive genotypes (group E). The parental genotypes P3 and P8 were identified as good combiners to increase chlorophyll b, total chlorophyll content, relative water content, grain yield, and yield components under water deficit conditions. Additionally, the cross combinations P2 × P4, P3 × P5, P3 × P8, and P6 × P7 were the most promising combinations to increase yield traits and multiple physiological parameters under water deficit conditions. Furthermore, P1, P2, and P5 were recognized as promising parents to improve grain protein content and wet and dry gluten contents under drought stress. In addition, the crosses P1 × P4, P2 × P3, P2 × P5, P2 × P6, P4 × P7, P5 × P7, P5 × P8, P6 × P8, and P7 × P8 were the best combinations to improve grain protein content under water-stressed and non-stressed conditions. Certain physiological traits displayed highly positive associations with grain yield and its contributing traits under drought stress such as chlorophyll a, chlorophyll b, total chlorophyll content, photosynthetic efficiency (Fv/Fm), proline content, and relative water content, which suggest their importance for indirect selection under water deficit conditions. Otherwise, grain protein content was negatively correlated with grain yield, indicating that selection for higher grain yield could reduce grain protein content under drought stress conditions.
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Affiliation(s)
- Mohamed M. Kamara
- Department of Agronomy, Faculty of Agriculture, Kafrelsheikh University, Kafr El-Sheikh 33516, Egypt; (M.M.K.); (E.M.H.)
| | - Medhat Rehan
- Department of Plant Production and Protection, College of Agriculture and Veterinary Medicine, Qassim University, Burydah 51452, Saudi Arabia
- Department of Genetics, College of Agriculture, Kafrelsheikh University, Kafr El-Sheikh 33516, Egypt
| | - Amany M. Mohamed
- Seed Technology Research Department, Field Crops Research Institute, Agricultural Research Center, Giza 12619, Egypt;
| | - Rania F. El Mantawy
- Crop Physiology Research Department, Field Crops Research Institute, Agricultural Research Center, Giza 12619, Egypt;
| | - Ahmed M. S. Kheir
- Soils, Water and Environment Research Institute, Agricultural Research Center, Giza 12112, Egypt;
- International Center for Biosaline Agriculture, Directorate of Programs, Dubai 14660, United Arab Emirates
| | - Diaa Abd El-Moneim
- Department of Plant Production (Genetic Branch), Faculty of Environmental Agricultural Sciences, Arish University, El-Arish 45511, Egypt;
| | - Fatmah Ahmed Safhi
- Department of Biology, College of Science, Princess Nourah bint Abdulrahman University, P.O. Box 84428, Riyadh 11671, Saudi Arabia;
| | - Salha M. ALshamrani
- Department of Biology, College of Science, University of Jeddah, Jeddah 21959, Saudi Arabia;
| | - Emad M. Hafez
- Department of Agronomy, Faculty of Agriculture, Kafrelsheikh University, Kafr El-Sheikh 33516, Egypt; (M.M.K.); (E.M.H.)
| | - Said I. Behiry
- Agricultural Botany Department, Faculty of Agriculture (Saba Basha), Alexandria University, Alexandria 21531, Egypt;
| | - Mohamed M. A. Ali
- Department of Crop Science, Faculty of Agriculture, Zagazig University, Zagazig 44519, Egypt; (M.M.A.A.); (E.M.)
| | - Elsayed Mansour
- Department of Crop Science, Faculty of Agriculture, Zagazig University, Zagazig 44519, Egypt; (M.M.A.A.); (E.M.)
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Vuković R, Čamagajevac IŠ, Vuković A, Šunić K, Begović L, Mlinarić S, Sekulić R, Sabo N, Španić V. Physiological, Biochemical and Molecular Response of Different Winter Wheat Varieties under Drought Stress at Germination and Seedling Growth Stage. Antioxidants (Basel) 2022; 11:antiox11040693. [PMID: 35453378 PMCID: PMC9028496 DOI: 10.3390/antiox11040693] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/10/2022] [Revised: 03/29/2022] [Accepted: 03/30/2022] [Indexed: 01/24/2023] Open
Abstract
Due to climate change in recent years, there has been an increasing water deficit during the winter wheat sowing period. This study evaluated six Croatian winter wheat varieties’ physiological, biochemical, and molecular responses under two drought stress levels at the germination/seedling growth stage. Lipid peroxidation was mainly induced under both drought stress treatments, while the antioxidative response was variety-specific. The most significant role in the antioxidative response had glutathione along with the ascorbate-glutathione pathway. Under drought stress, wheat seedlings responded in proline accumulation that was correlated with the P5CS gene expression. Expression of genes encoding dehydrins (DHN5, WZY2) was highly induced under the drought stress in all varieties, while genes encoding transcription factors were differentially regulated. Expression of DREB1 was upregulated under severe drought stress in most varieties, while the expression of WRKY2 was downregulated or revealed control levels. Different mechanisms were shown to contribute to the drought tolerance in different varieties, which was mainly associated with osmotic adjustment and dehydrins expression. Identifying different mechanisms in drought stress response would advance our understanding of the complex strategies contributing to wheat tolerance to drought in the early growth stage and could contribute to variety selection useful for developing new drought-tolerant varieties.
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Affiliation(s)
- Rosemary Vuković
- Department of Biology, University of Osijek, 31000 Osijek, Croatia; (R.V.); (I.Š.Č.); (A.V.); (L.B.); (S.M.); (R.S.); (N.S.)
| | - Ivna Štolfa Čamagajevac
- Department of Biology, University of Osijek, 31000 Osijek, Croatia; (R.V.); (I.Š.Č.); (A.V.); (L.B.); (S.M.); (R.S.); (N.S.)
| | - Ana Vuković
- Department of Biology, University of Osijek, 31000 Osijek, Croatia; (R.V.); (I.Š.Č.); (A.V.); (L.B.); (S.M.); (R.S.); (N.S.)
| | - Katarina Šunić
- Department of Small Cereal Crops, Agricultural Institute Osijek, 31000 Osijek, Croatia;
| | - Lidija Begović
- Department of Biology, University of Osijek, 31000 Osijek, Croatia; (R.V.); (I.Š.Č.); (A.V.); (L.B.); (S.M.); (R.S.); (N.S.)
| | - Selma Mlinarić
- Department of Biology, University of Osijek, 31000 Osijek, Croatia; (R.V.); (I.Š.Č.); (A.V.); (L.B.); (S.M.); (R.S.); (N.S.)
| | - Ramona Sekulić
- Department of Biology, University of Osijek, 31000 Osijek, Croatia; (R.V.); (I.Š.Č.); (A.V.); (L.B.); (S.M.); (R.S.); (N.S.)
| | - Nikolina Sabo
- Department of Biology, University of Osijek, 31000 Osijek, Croatia; (R.V.); (I.Š.Č.); (A.V.); (L.B.); (S.M.); (R.S.); (N.S.)
| | - Valentina Španić
- Department of Small Cereal Crops, Agricultural Institute Osijek, 31000 Osijek, Croatia;
- Correspondence:
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Abstract
Wheat is a cereal grain crop that is commonly cultivated and is a good source of nutrients that are beneficial to human health. In recent years, the productivity of wheat has been steadily declining, with abiotic pressures accounting for almost half of all yield losses. Drought stress is a significant limiting factor for plant development and production around the planet. The influence of polyethylene glycol (PEG) (at concentrations of 5, 10, and 15%)-induced drought stress on the morphological, physiological, and biochemical characteristics of fifteen wheat genotypes was investigated in this work. Overall, it was discovered that morphological and physiological indicators such as germination % and shoot-root lengths during the seedling stage had reduced significantly. The proline content, on the other hand, was shown to be positively correlated with the concentration of PEG treatments. There was a significant difference between the genotypes HD2733, HD2888, and RAJ3765 regarding tolerance to abiotic stress caused by drought. A further finding was that under stressful settings, the first three main components explained 56.65 percent, 65.06 percent, and 72.47 percent of the total variability in PEG treatment levels of five, ten, and fifteen percent, respectively. These collective morphological and physiological parameters, and analyses of their diverse responses, could be used for screening of drought tolerance among the 15 wheat genotypes to select for significant drought tolerance and diverse molecular responses during breeding of stress resistant forms.
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Verbeke S, Padilla-Díaz CM, Haesaert G, Steppe K. Osmotic Adjustment in Wheat ( Triticum aestivum L.) During Pre- and Post-anthesis Drought. FRONTIERS IN PLANT SCIENCE 2022; 13:775652. [PMID: 35173756 PMCID: PMC8841719 DOI: 10.3389/fpls.2022.775652] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/14/2021] [Accepted: 01/10/2022] [Indexed: 05/20/2023]
Abstract
Pre-anthesis drought is expected to greatly increase yield losses in wheat (Triticum aestivum L.), one of the most important crops worldwide. Most studies investigate the effects of pre-anthesis drought only at maturity. The physiology of the plant before anthesis and how it is affected during drought is less studied. Our study focused on physiological patterns in wheat plants during pre- and post-anthesis drought. To this end, we measured leaf xylem water potential, osmotic potential and water content in different plant parts at a high temporal frequency: every 3 days, three times a day. The experiment started just before booting until 2 weeks after flowering. Drought stress was induced by withholding irrigation with rewatering upon turgor loss, which occurred once before and once after anthesis. The goal was to investigate the patterns of osmotic adjustment, when it is used for protection against drought, and if the strategy changes during the phenological development of the plant. Our data gave no indication of daily osmotic adjustment, but did show a delicate control of the osmotic potential during drought in both leaves and stem. Under high drought stress, osmotic potential decreased to avoid further water loss. Before anthesis, rewatering restored leaf water potential and osmotic potential quickly. After anthesis, rewatering restored water potential in the flag leaves, but the osmotic potential in the stem and flag leaf remained low longer. Osmotic adjustment was thus maintained longer after anthesis, showing that the plants invest more energy in the osmotic adjustment after anthesis than before anthesis. We hypothesize that this is because the plants consider the developing ear after anthesis a more important carbohydrate sink than the stem, which is a carbohydrate sink before anthesis, to be used later as a reserve. Low osmotic potential in the stem allowed turgor maintenance, while the low osmotic potential in the flag leaf led to an increase in leaf turgor beyond the level of the control plants. This allowed leaf functioning under drought and assured that water was redirected to the flag leaf and not used to refill the stem storage.
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Affiliation(s)
- Sarah Verbeke
- Laboratory of Plant Ecology, Department of Plants and Crops, Faculty of Bioscience Engineering, Ghent University, Ghent, Belgium
- *Correspondence: Sarah Verbeke
| | - Carmen María Padilla-Díaz
- Laboratory of Plant Ecology, Department of Plants and Crops, Faculty of Bioscience Engineering, Ghent University, Ghent, Belgium
- Department of Plant Envirogenetics, Faculty of Science and Engineering, Maastricht University, Maastricht, Netherlands
| | - Geert Haesaert
- Department of Plants and Crops, Faculty of Bioscience Engineering, Ghent University, Ghent, Belgium
| | - Kathy Steppe
- Laboratory of Plant Ecology, Department of Plants and Crops, Faculty of Bioscience Engineering, Ghent University, Ghent, Belgium
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Aleem M, Riaz A, Raza Q, Aleem M, Aslam M, Kong K, Atif RM, Kashif M, Bhat JA, Zhao T. Genome-wide characterization and functional analysis of class III peroxidase gene family in soybean reveal regulatory roles of GsPOD40 in drought tolerance. Genomics 2022; 114:45-60. [PMID: 34813918 DOI: 10.1016/j.ygeno.2021.11.016] [Citation(s) in RCA: 22] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2021] [Revised: 10/18/2021] [Accepted: 11/11/2021] [Indexed: 12/31/2022]
Abstract
Class III peroxidases (PODs) are plant-specific glycoproteins, that play essential roles in various plant physiological processes and defence responses. To date, scarce information is available about the POD gene family in soybean. Hence, the present study is the first comprehensive report about the genome-wide characterization of GmPOD gene family in soybean (Glycine max L.). Here, we identified a total of 124 GmPOD genes in soybean, that are unevenly distributed across the genome. Phylogenetic analysis classified them into six distinct sub-groups (A-F), with one soybean specific subgroup. Exon-intron and motif analysis suggested the existence of structural and functional diversity among the sub-groups. Duplication analysis identified 58 paralogous gene pairs; segmental duplication and positive/Darwinian selection were observed as the major factors involved in the evolution of GmPODs. Furthermore, RNA-seq analysis revealed that 23 out of a total 124 GmPODs showed differential expression between drought-tolerant and drought-sensitive genotypes under stress conditions; however, two of them (GmPOD40 and GmPOD42) revealed the maximum deregulation in all contrasting genotypes. Overexpression (OE) lines of GsPOD40 showed considerably higher drought tolerance compared to wild type (WT) plants under stress treatment. Moreover, the OE lines showed enhanced photosynthesis and enzymatic antioxidant activities under drought stress, resulting in alleviation of ROS induced oxidative damage. Hence, the GsPOD40 enhanced drought tolerance in soybean by regulating the key physiological and biochemical pathways involved in the defence response. Lastly, the results of our study will greatly assist in further functional characterization of GsPODs in plant growth and stress tolerance in soybean.
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Affiliation(s)
- Muqadas Aleem
- National Center for Soybean Improvement, Key Laboratory of Biology and Genetics and Breeding for Soybean, Ministry of Agriculture, State Key Laboratory of Crop Genetics and Germplasm Enhancement, Nanjing Agricultural University, Nanjing 210095, China; Department of Plant Breeding and Genetics, University of Agriculture, Faisalabad, Pakistan
| | - Awais Riaz
- Molecular Breeding Laboratory, Rice Research Institute, Kala Shah Kaku, Sheikhupura, Punjab, Pakistan
| | - Qasim Raza
- Molecular Breeding Laboratory, Rice Research Institute, Kala Shah Kaku, Sheikhupura, Punjab, Pakistan
| | - Maida Aleem
- Government Post Graduate College Samanabad, Faisalabad, Pakistan
| | - Muhammad Aslam
- National Center for Soybean Improvement, Key Laboratory of Biology and Genetics and Breeding for Soybean, Ministry of Agriculture, State Key Laboratory of Crop Genetics and Germplasm Enhancement, Nanjing Agricultural University, Nanjing 210095, China
| | - Keke Kong
- National Center for Soybean Improvement, Key Laboratory of Biology and Genetics and Breeding for Soybean, Ministry of Agriculture, State Key Laboratory of Crop Genetics and Germplasm Enhancement, Nanjing Agricultural University, Nanjing 210095, China
| | - Rana Muhammad Atif
- Department of Plant Breeding and Genetics, University of Agriculture, Faisalabad, Pakistan
| | - Muhammad Kashif
- Department of Plant Breeding and Genetics, University of Agriculture, Faisalabad, Pakistan
| | - Javaid Akhtar Bhat
- National Center for Soybean Improvement, Key Laboratory of Biology and Genetics and Breeding for Soybean, Ministry of Agriculture, State Key Laboratory of Crop Genetics and Germplasm Enhancement, Nanjing Agricultural University, Nanjing 210095, China
| | - Tuanjie Zhao
- National Center for Soybean Improvement, Key Laboratory of Biology and Genetics and Breeding for Soybean, Ministry of Agriculture, State Key Laboratory of Crop Genetics and Germplasm Enhancement, Nanjing Agricultural University, Nanjing 210095, China.
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Jung WJ, Lee YJ, Kang CS, Seo YW. Identification of genetic loci associated with major agronomic traits of wheat (Triticum aestivum L.) based on genome-wide association analysis. BMC PLANT BIOLOGY 2021; 21:418. [PMID: 34517837 PMCID: PMC8436466 DOI: 10.1186/s12870-021-03180-6] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/16/2021] [Accepted: 08/11/2021] [Indexed: 05/06/2023]
Abstract
BACKGROUND Bread wheat (Triticum aestivum L.) is one of the most widely consumed cereal crops, but its complex genome makes it difficult to investigate the genetic effect on important agronomic traits. Genome-wide association (GWA) analysis is a useful method to identify genetic loci controlling complex phenotypic traits. With the RNA-sequencing based gene expression analysis, putative candidate genes governing important agronomic trait can be suggested and also molecular markers can be developed. RESULTS We observed major quantitative agronomic traits of wheat; the winter survival rate (WSR), days to heading (DTH), days to maturity (DTM), stem length (SL), spike length (SPL), awn length (AL), liter weight (LW), thousand kernel weight (TKW), and the number of seeds per spike (SPS), of 287 wheat accessions from diverse country origins. A significant correlation was observed between the observed traits, and the wheat genotypes were divided into three subpopulations according to the population structure analysis. The best linear unbiased prediction (BLUP) values of the genotypic effect for each trait under different environments were predicted, and these were used for GWA analysis based on a mixed linear model (MLM). A total of 254 highly significant marker-trait associations (MTAs) were identified, and 28 candidate genes closely located to the significant markers were predicted by searching the wheat reference genome and RNAseq data. Further, it was shown that the phenotypic traits were significantly affected by the accumulation of favorable or unfavorable alleles. CONCLUSIONS From this study, newly identified MTA and putative agronomically useful genes will help to study molecular mechanism of each phenotypic trait. Further, the agronomically favorable alleles found in this study can be used to develop wheats with superior agronomic traits.
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Affiliation(s)
- Woo Joo Jung
- Department of Plant Biotechnology, Korea University, Seoul, 02841, South Korea
| | - Yong Jin Lee
- Department of Biotechnology, Korea University, Seoul, 02841, South Korea
| | - Chon-Sik Kang
- National Institute of Crop Science, Rural Development Administration, Wanju, 55365, Republic of Korea
| | - Yong Weon Seo
- Department of Plant Biotechnology, Korea University, Seoul, 02841, South Korea.
- Department of Biotechnology, Korea University, Seoul, 02841, South Korea.
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Ecotypic Morphological and Physio-Biochemical Responses of Two Differentially Adapted Forage Grasses, Cenchrus ciliaris L. and Cyperus arenarius Retz. to Drought Stress. SUSTAINABILITY 2021. [DOI: 10.3390/su13148069] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
Abstract
Crop performance and yield are the results of genotypic expression as modulated by continuous interaction with the environment. Among the environmental aspects, drought and salinity are the most important factors, which limit the forages, including grasses, on a global basis. Grass species have the ability to grow under low water conditions and can produce high dry yield, proteins, and energy in areas exposed to drought stress. For this purpose, we conducted the present study to understand the response of forage grasses under drought stress from two different regions (Salt Range and Faisalabad) of Punjab, Pakistan. Two ecotypes of each grass species (Cenchrus ciliaris L. and Cyperus arenarius Retz.) were grown in pots at the botanical research area, Government College University Faisalabad, Pakistan. A group of plants were subjected to drought stress (60% field capacity) and controlled (100% field capacity) after three weeks of seed germination. The results from the present study depicted that the fresh and dry weights of root and shoot were decreased significantly under drought conditions. Moreover, C. ciliaris of the Salt Range area showed more resistance and higher growth production under drought stress. The chlorophyll (a and b) contents were also decreased significantly, while MDA, total soluble sugars, and proline levels were increased significantly under water-limited environments in the C. arenarius of Salt Range area. Enzymatic antioxidants (superoxidase dismutase (SOD) and peroxidase (POD)) and leaf Na+ were significantly raised in C. arenarius under drought stress collected from the Faisalabad region. Cenchrus ciliaris showed higher level of H2O2, total soluble proteins, glycinebetaine, catalase (CAT) and POD compared to C. arenarius. It also retained more leaf and root Ca2+, and root K+ under drought stress. It was concluded from the study that C. ciliaris is more resistant to drought in biomass production collected from the Salt Range area. The results suggested that C. ciliaris can be more widely used as a forage grass under water-scarce conditions as compared to C. arenarius.
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Chaudhry UK, Gökçe ZNÖ, Gökçe AF. Drought and salt stress effects on biochemical changes and gene expression of photosystem II and catalase genes in selected onion cultivars. Biologia (Bratisl) 2021. [DOI: 10.1007/s11756-021-00827-5] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
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EMS Derived Wheat Mutant BIG8-1 ( Triticum aestivum L.)-A New Drought Tolerant Mutant Wheat Line. Int J Mol Sci 2021; 22:ijms22105314. [PMID: 34070033 PMCID: PMC8158095 DOI: 10.3390/ijms22105314] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/19/2021] [Revised: 04/22/2021] [Accepted: 04/29/2021] [Indexed: 12/20/2022] Open
Abstract
Drought response in wheat is considered a highly complex process, since it is a multigenic trait; nevertheless, breeding programs are continuously searching for new wheat varieties with characteristics for drought tolerance. In a previous study, we demonstrated the effectiveness of a mutant known as RYNO3936 that could survive 14 days without water. In this study, we reveal another mutant known as BIG8-1 that can endure severe water deficit stress (21 days without water) with superior drought response characteristics. Phenotypically, the mutant plants had broader leaves, including a densely packed fibrous root architecture that was not visible in the WT parent plants. During mild (day 7) drought stress, the mutant could maintain its relative water content, chlorophyll content, maximum quantum yield of PSII (Fv/Fm) and stomatal conductance, with no phenotypic symptoms such as wilting or senescence despite a decrease in soil moisture content. It was only during moderate (day 14) and severe (day 21) water deficit stress that a decline in those variables was evident. Furthermore, the mutant plants also displayed a unique preservation of metabolic activity, which was confirmed by assessing the accumulation of free amino acids and increase of antioxidative enzymes (peroxidases and glutathione S-transferase). Proteome reshuffling was also observed, allowing slow degradation of essential proteins such as RuBisCO during water deficit stress. The LC-MS/MS data revealed a high abundance of proteins involved in energy and photosynthesis under well-watered conditions, particularly Serpin-Z2A and Z2B, SGT1 and Calnexin-like protein. However, after 21 days of water stress, the mutants expressed ABC transporter permeases and xylanase inhibitor protein, which are involved in the transport of amino acids and protecting cells, respectively. This study characterizes a new mutant BIG8-1 with drought-tolerant characteristics suited for breeding programs.
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Physio-Morphological and Biochemical Trait-Based Evaluation of Ethiopian and Chinese Wheat Germplasm for Drought Tolerance at the Seedling Stage. SUSTAINABILITY 2021. [DOI: 10.3390/su13094605] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
Abstract
For Ethiopia’s wheat production, drought is a major natural disaster. Exploration of drought-resistant varieties from a bulk of wheat germplasm conserved in the gene bank is of paramount importance for breeding climate change-resilient modern cultivars. The present study was aimed at identifying the best performing drought-resistant genotypes under non-stress and polyethylene glycol simulated (PEG) stress conditions in a growth chamber. Forty diverse Ethiopian bread and durum wheat cultivars along with three Chinese bread wheat cultivars possessing strong drought resistance and susceptibility were evaluated. After acclimation with the natural environment, the seedlings were imposed to severe drought stress (20% PEG6000), and 15 seedling traits including photosynthetic and free proline were investigated. Our findings indicated that drought stress caused a profound decline in plant water consumption (83.0%), shoot fresh weight (64.9%), stomatal conductance (61.6%), root dry weight (55.2%), and other investigated traits except root to shoot length ratio and proline content which showed a significant increase under drought stress. A significant and positive correlation was found between photosynthetic pigments in both growth conditions. Proline exhibited a negative correlation with most of the investigated traits except root to shoot length ratio and all photosynthetic pigments which showed a positive and non-significant association. Our result also showed a wide range of genetic variation (CV) ranging from 3.23% to 47.3%; the highest in shoot dry weight (SDW) (47.3%) followed by proline content (44.63%) and root dry weight (36.03%). Based on multivariate principal component biplot analysis and average sum of ranks (ASR), G12, G16 and G25 were identified as the best drought tolerant and G6, G42, G4, G11, and G9 as bottom five sensitive. The potential of these genotypes offers further investigation at a molecular and cellular level to identify the novel gene associated with the stress response.
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Effects of plant growth-promoting rhizobacteria strains producing ACC deaminase on photosynthesis, isoprene emission, ethylene formation and growth of Mucuna pruriens (L.) DC. in response to water deficit. J Biotechnol 2021; 331:53-62. [PMID: 33727083 DOI: 10.1016/j.jbiotec.2021.03.008] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/11/2020] [Revised: 01/06/2021] [Accepted: 03/07/2021] [Indexed: 11/20/2022]
Abstract
Agricultural sustainability is an increasing need considering the challenges posed by climate change and rapid human population growth. The use of plant growth-promoting rhizobacteria (PGPR) may represent an excellent, new agriculture practice to improve soil quality while promoting growth and yield of important crop species subjected to water stress conditions. In this study, two PGPR strains with 1-Aminocyclopropane-1-Carboxylate (ACC) deaminase activity were co-inoculated in velvet bean plants to verify the physiological, biochemical and molecular responses to progressive water stress. The results of our study show that the total biomass and the water use efficiency of inoculated plants were higher than uninoculated plants at the end of the water stress period. These positive effects may be derived from a lower root ACC content (-45 %) in water-stressed inoculated plants than in uninoculated ones resulting in lower root ethylene emission. Furthermore, the ability of inoculated plants to maintain higher levels of both isoprene emission, a priming compound that may help to protect leaves from oxidative damage, and carbon assimilation during water stress progression may indicate the underlining metabolic processes conferring water stress tolerance. Overall, the experimental results show that co-inoculation with ACC deaminase PGPR positively affects tolerance to water deficit, confirming the potential for biotechnological applications in water-stressed agricultural areas.
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Genome-Wide Association Mapping Unravels the Genetic Control of Seed Vigor under Low-Temperature Conditions in Rapeseed ( Brassica napus L.). PLANTS 2021; 10:plants10030426. [PMID: 33668258 PMCID: PMC7996214 DOI: 10.3390/plants10030426] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/20/2021] [Revised: 02/15/2021] [Accepted: 02/15/2021] [Indexed: 11/16/2022]
Abstract
Low temperature inhibits rapid germination and successful seedling establishment of rapeseed (Brassica napus L.), leading to significant productivity losses. Little is known about the genetic diversity for seed vigor under low-temperature conditions in rapeseed, which motivated our investigation of 13 seed germination- and emergence-related traits under normal and low-temperature conditions for 442 diverse rapeseed accessions. The stress tolerance index was calculated for each trait based on performance under non-stress and low-temperature stress conditions. Principal component analysis of the low-temperature stress tolerance indices identified five principal components that captured 100% of the seedling response to low temperature. A genome-wide association study using ~8 million SNP (single-nucleotide polymorphism) markers identified from genome resequencing was undertaken to uncover the genetic basis of seed vigor related traits in rapeseed. We detected 22 quantitative trait loci (QTLs) significantly associated with stress tolerance indices regarding seed vigor under low-temperature stress. Scrutiny of the genes in these QTL regions identified 62 candidate genes related to specific stress tolerance indices of seed vigor, and the majority were involved in DNA repair, RNA translation, mitochondrial activation and energy generation, ubiquitination and degradation of protein reserve, antioxidant system, and plant hormone and signal transduction. The high effect variation and haplotype-based effect of these candidate genes were evaluated, and high priority could be given to the candidate genes BnaA03g40290D, BnaA06g07530D, BnaA09g06240D, BnaA09g06250D, and BnaC02g10720D in further study. These findings should be useful for marker-assisted breeding and genomic selection of rapeseed to increase seed vigor under low-temperature stress.
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Alotaibi F, Alharbi S, Alotaibi M, Al Mosallam M, Motawei M, Alrajhi A. Wheat omics: Classical breeding to new breeding technologies. Saudi J Biol Sci 2021; 28:1433-1444. [PMID: 33613071 PMCID: PMC7878716 DOI: 10.1016/j.sjbs.2020.11.083] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/17/2020] [Revised: 11/26/2020] [Accepted: 11/29/2020] [Indexed: 12/26/2022] Open
Abstract
Wheat is an important cereal crop, and its significance is more due to compete for dietary products in the world. Many constraints facing by the wheat crop due to environmental hazardous, biotic, abiotic stress and heavy matters factors, as a result, decrease the yield. Understanding the molecular mechanism related to these factors is significant to figure out genes regulate under specific conditions. Classical breeding using hybridization has been used to increase the yield but not prospered at the desired level. With the development of newly emerging technologies in biological sciences i.e., marker assisted breeding (MAB), QTLs mapping, mutation breeding, proteomics, metabolomics, next-generation sequencing (NGS), RNA_sequencing, transcriptomics, differential expression genes (DEGs), computational resources and genome editing techniques i.e. (CRISPR cas9; Cas13) advances in the field of omics. Application of new breeding technologies develops huge data; considerable development is needed in bioinformatics science to interpret the data. However, combined omics application to address physiological questions linked with genetics is still a challenge. Moreover, viroid discovery opens the new direction for research, economics, and target specification. Comparative genomics important to figure gene of interest processes are further discussed about considering the identification of genes, genomic loci, and biochemical pathways linked with stress resilience in wheat. Furthermore, this review extensively discussed the omics approaches and their effective use. Integrated plant omics technologies have been used viroid genomes associated with CRISPR and CRISPR-associated Cas13a proteins system used for engineering of viroid interference along with high-performance multidimensional phenotyping as a significant limiting factor for increasing stress resistance in wheat.
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Affiliation(s)
- Fahad Alotaibi
- King Abdulaziz City for Science and Technology (KACST), Riyadh, Saudi Arabia
| | - Saif Alharbi
- King Abdulaziz City for Science and Technology (KACST), Riyadh, Saudi Arabia
| | - Majed Alotaibi
- King Abdulaziz City for Science and Technology (KACST), Riyadh, Saudi Arabia
| | - Mobarak Al Mosallam
- King Abdulaziz City for Science and Technology (KACST), Riyadh, Saudi Arabia
| | | | - Abdullah Alrajhi
- King Abdulaziz City for Science and Technology (KACST), Riyadh, Saudi Arabia
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Fatiukha A, Deblieck M, Klymiuk V, Merchuk-Ovnat L, Peleg Z, Ordon F, Fahima T, Korol A, Saranga Y, Krugman T. Genomic Architecture of Phenotypic Plasticity in Response to Water Stress in Tetraploid Wheat. Int J Mol Sci 2021; 22:ijms22041723. [PMID: 33572141 PMCID: PMC7915520 DOI: 10.3390/ijms22041723] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2021] [Revised: 02/04/2021] [Accepted: 02/05/2021] [Indexed: 01/12/2023] Open
Abstract
Phenotypic plasticity is one of the main mechanisms of adaptation to abiotic stresses via changes in critical developmental stages. Altering flowering phenology is a key evolutionary strategy of plant adaptation to abiotic stresses, to achieve the maximum possible reproduction. The current study is the first to apply the linear regression residuals as drought plasticity scores while considering the variation in flowering phenology and traits under non-stress conditions. We characterized the genomic architecture of 17 complex traits and their drought plasticity scores for quantitative trait loci (QTL) mapping, using a mapping population derived from a cross between durum wheat (Triticum turgidum ssp. durum) and wild emmer wheat (T. turgidum ssp. dicoccoides). We identified 79 QTLs affected observed traits and their plasticity scores, of which 33 reflected plasticity in response to water stress and exhibited epistatic interactions and/or pleiotropy between the observed and plasticity traits. Vrn-B3 (TaTF1) residing within an interval of a major drought-escape QTL was proposed as a candidate gene. The favorable alleles for most of the plasticity QTLs were contributed by wild emmer wheat, demonstrating its high potential for wheat improvement. Our study presents a new approach for the quantification of plant adaptation to various stresses and provides new insights into the genetic basis of wheat complex traits under water-deficit stress.
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Affiliation(s)
- Andrii Fatiukha
- Institute of Evolution, University of Haifa, Haifa 3498838, Israel; (A.F.); (V.K.); (T.F.); (A.K.)
- Department of Evolutionary and Environmental Biology, University of Haifa, Haifa 3498838, Israel
| | - Mathieu Deblieck
- Julius Kühn-Institut (JKI) Federal Research Centre for Cultivated Plants, Institute for Resistance Research and Stress Tolerance, 06484 Quedlinburg, Germany; (M.D.); (F.O.)
| | - Valentyna Klymiuk
- Institute of Evolution, University of Haifa, Haifa 3498838, Israel; (A.F.); (V.K.); (T.F.); (A.K.)
- Department of Evolutionary and Environmental Biology, University of Haifa, Haifa 3498838, Israel
| | - Lianne Merchuk-Ovnat
- R. H. Smith Institute of Plant Science & Genetics in Agriculture, The Hebrew University of Jerusalem, Rehovot 7610001, Israel; (L.M.-O.); (Z.P.); (Y.S.)
| | - Zvi Peleg
- R. H. Smith Institute of Plant Science & Genetics in Agriculture, The Hebrew University of Jerusalem, Rehovot 7610001, Israel; (L.M.-O.); (Z.P.); (Y.S.)
| | - Frank Ordon
- Julius Kühn-Institut (JKI) Federal Research Centre for Cultivated Plants, Institute for Resistance Research and Stress Tolerance, 06484 Quedlinburg, Germany; (M.D.); (F.O.)
| | - Tzion Fahima
- Institute of Evolution, University of Haifa, Haifa 3498838, Israel; (A.F.); (V.K.); (T.F.); (A.K.)
- Department of Evolutionary and Environmental Biology, University of Haifa, Haifa 3498838, Israel
| | - Abraham Korol
- Institute of Evolution, University of Haifa, Haifa 3498838, Israel; (A.F.); (V.K.); (T.F.); (A.K.)
- Department of Evolutionary and Environmental Biology, University of Haifa, Haifa 3498838, Israel
| | - Yehoshua Saranga
- R. H. Smith Institute of Plant Science & Genetics in Agriculture, The Hebrew University of Jerusalem, Rehovot 7610001, Israel; (L.M.-O.); (Z.P.); (Y.S.)
| | - Tamar Krugman
- Institute of Evolution, University of Haifa, Haifa 3498838, Israel; (A.F.); (V.K.); (T.F.); (A.K.)
- Correspondence: ; Tel.: +972-04-8240783
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Gedam PA, Thangasamy A, Shirsat DV, Ghosh S, Bhagat KP, Sogam OA, Gupta AJ, Mahajan V, Soumia PS, Salunkhe VN, Khade YP, Gawande SJ, Hanjagi PS, Ramakrishnan RS, Singh M. Screening of Onion ( Allium cepa L.) Genotypes for Drought Tolerance Using Physiological and Yield Based Indices Through Multivariate Analysis. FRONTIERS IN PLANT SCIENCE 2021; 12:600371. [PMID: 33633759 PMCID: PMC7900547 DOI: 10.3389/fpls.2021.600371] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/29/2020] [Accepted: 01/18/2021] [Indexed: 05/12/2023]
Abstract
Drought is a leading abiotic constraints for onion production globally. Breeding by using unique genetic resources for drought tolerance is a vital mitigation strategy. With a total of 100 onion genotypes were screened for drought tolerance using multivariate analysis. The experiment was conducted in a controlled rainout shelter for 2 years 2017-2018 and 2018-2019 in a randomized block design with three replications and two treatments (control and drought stress). The plant was exposed to drought stress during the bulb development stage (i.e., 50-75 days after transplanting). The genotypes were screened on the basis of the drought tolerance efficiency (DTE), percent bulb yield reduction, and results of multivariate analysis viz. hierarchical cluster analysis by Ward's method, discriminate analysis and principal component analysis. The analysis of variance indicated significant differences among the tested genotypes and treatments for all the parameters studied, viz. phenotypic, physiological, biochemical, and yield attributes. Bulb yield was strongly positively correlated with membrane stability index (MSI), relative water content (RWC), total chlorophyll content, antioxidant enzyme activity, and leaf area under drought stress. The genotypes were categorized into five groups namely, highly tolerant, tolerant, intermediate, sensitive, and highly sensitive based on genetic distance. Under drought conditions, clusters II and IV contained highly tolerant and highly sensitive genotypes, respectively. Tolerant genotypes, viz. Acc. 1656, Acc. 1658, W-009, and W-085, had higher DTE (>90%), fewer yield losses (<20%), and performed superiorly for different traits under drought stress. Acc. 1627 and Acc. 1639 were found to be highly drought-sensitive genotypes, with more than 70% yield loss. In biplot, the tolerant genotypes (Acc. 1656, Acc. 1658, W-085, W-009, W-397, W-396, W-414, and W-448) were positively associated with bulb yield, DTE, RWC, MSI, leaf area, and antioxidant enzyme activity under drought stress. The study thus identified tolerant genotypes with favorable adaptive traits that may be useful in onion breeding program for drought tolerance.
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Affiliation(s)
| | - A. Thangasamy
- ICAR-Directorate of Onion and Garlic Research, Rajgurunagar, India
| | | | - Sourav Ghosh
- ICAR-Directorate of Onion and Garlic Research, Rajgurunagar, India
| | - K. P. Bhagat
- ICAR-Directorate of Onion and Garlic Research, Rajgurunagar, India
| | - Onkar A. Sogam
- ICAR-Directorate of Onion and Garlic Research, Rajgurunagar, India
| | - A. J. Gupta
- ICAR-Directorate of Onion and Garlic Research, Rajgurunagar, India
| | - V. Mahajan
- ICAR-Directorate of Onion and Garlic Research, Rajgurunagar, India
| | - P. S. Soumia
- ICAR-Directorate of Onion and Garlic Research, Rajgurunagar, India
| | | | - Yogesh P. Khade
- ICAR-Directorate of Onion and Garlic Research, Rajgurunagar, India
| | | | - P. S. Hanjagi
- ICAR-National Rice Research Institute, Cuttack, India
| | | | - Major Singh
- ICAR-Directorate of Onion and Garlic Research, Rajgurunagar, India
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Evaluation of Responsivity to Drought Stress Using Infrared Thermography and Chlorophyll Fluorescence in Potted Clones of Cryptomeria japonica. FORESTS 2021. [DOI: 10.3390/f12010055] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
As climate change progresses, the breeding of drought-tolerant forest trees is necessary. Breeding drought-tolerant trees requires screening for drought stress using a large number of individuals and a high-throughput phenotyping method. The aim of this study was therefore to establish high-throughput methods for evaluating the clonal stress responses to drought stress using infrared thermography and chlorophyll fluorescence methods in Cryptomeria japonica. The stomatal conductance index (Ig), maximum photochemical quantum yield of photosystem II (Fv/Fm), and axial growth of four plus-tree clones of C. japonica planted in pots were measured weekly for 85 days after irrigation was stopped. The phenotypic trait responsivity to drought stress was estimated by a nonlinear mixed model and by introducing the cumulative water index, which considers the past history of the soil water environment. These methods and procedures enabled us to evaluate the clonal stress responses in C. japonica and could be applied to large-scale clone materials to promote the breeding program for drought tolerance.
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Chetverikov SP, Chetverikova DV, Bakaeva MD, Kenjieva AA, Starikov SN, Sultangazin ZR. A Promising Herbicide-Resistant Bacterial Strain of Pseudomonas protegens for Stimulation of the Growth of Agricultural Cereal Grains. APPL BIOCHEM MICRO+ 2021. [DOI: 10.1134/s0003683821010051] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Griffiths CA, Reynolds MP, Paul MJ. Combining yield potential and drought resilience in a spring wheat diversity panel. Food Energy Secur 2020; 9:e241. [PMID: 33391733 PMCID: PMC7771037 DOI: 10.1002/fes3.241] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/15/2020] [Accepted: 07/22/2020] [Indexed: 12/23/2022] Open
Abstract
Pressures of population growth and climate change require the development of resilient higher yielding crops, particularly to drought. A spring wheat diversity panel was developed to combine high-yield potential with resilience. To assess performance under drought, which in many environments is intermittent and dependent on plant development, 150 lines were grown with drought imposed for 10 days either at jointing or at anthesis stages in Obregon, Mexico. Both drought treatments strongly reduced grain numbers compared with the fully irrigated check. Best performers under drought at jointing had more grain than poor performers, while best performers under drought at anthesis had larger grain than poor performers. Most high-yielding lines were high yielding in one drought environment only. However, some of the best-performing lines displayed yield potential and resilience across two environments (28 lines), particularly for yield under well-watered and drought at jointing, where yield was most related to grain numbers. Strikingly, only three lines were high yielding across all three environments, and interestingly, these lines had high grain numbers. Among parameters measured in leaves and grain, leaf relative water content did not correlate with yield, and proline was negatively correlated with yield; there were small but significant relationships between leaf sugars and yield. This study provides a valuable resource for further crosses and for elucidating genes and mechanisms that may contribute to grain number and grain filling conservation to combine yield potential and drought resilience.
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Mattioli R, Palombi N, Funck D, Trovato M. Proline Accumulation in Pollen Grains as Potential Target for Improved Yield Stability Under Salt Stress. FRONTIERS IN PLANT SCIENCE 2020; 11:582877. [PMID: 33193531 PMCID: PMC7655902 DOI: 10.3389/fpls.2020.582877] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/13/2020] [Accepted: 10/12/2020] [Indexed: 06/04/2023]
Abstract
Seed yield, a major determinant for the commercial success of grain crops, critically depends on pollen viability, which is dramatically reduced by environmental stresses, such as drought, salinity, and extreme temperatures. Salinity, in particular, is a major problem for crop yield known to affect about 20% of all arable land and cause huge economic losses worldwide. Flowering plants are particularly sensitive to environmental stress during sexual reproduction, and even a short exposure to stressing conditions can severely hamper reproductive success, and thus reduce crop yield. Since proline is required for pollen fertility and accumulates in plant tissues in response to different abiotic stresses, a role of proline in pollen protection under salt stress conditions can be envisaged. In this perspective, we analyze old and new data to evaluate the importance of pollen development under saline conditions, and discuss the possibility of raising proline levels in pollen grains as a biotechnological strategy to stabilize seed yield in the presence of salt stress. The overall data confirm that proline is necessary to preserve pollen fertility and limit seed loss under stressful conditions. However, at present, we have not enough data to conclude whether or not raising proline over wildtype levels in pollen grains can effectively ameliorate seed yield under saline conditions, and further work is still required.
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Affiliation(s)
- Roberto Mattioli
- Department of Biology and Biotechnology, Sapienza University of Rome, Rome, Italy
- Department of Science, Roma Tre University, Rome, Italy
| | - Noemi Palombi
- Department of Biology and Biotechnology, Sapienza University of Rome, Rome, Italy
| | - Dietmar Funck
- Department of Plant Physiology and Biochemistry, University of Konstanz, Konstanz, Germany
| | - Maurizio Trovato
- Department of Biology and Biotechnology, Sapienza University of Rome, Rome, Italy
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Liu H, Mullan D, Zhang C, Zhao S, Li X, Zhang A, Lu Z, Wang Y, Yan G. Major genomic regions responsible for wheat yield and its components as revealed by meta-QTL and genotype-phenotype association analyses. PLANTA 2020; 252:65. [PMID: 32970252 DOI: 10.1007/s00425-020-03466-3] [Citation(s) in RCA: 26] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/31/2020] [Accepted: 09/12/2020] [Indexed: 12/17/2022]
Abstract
MAIN CONCLUSION Meta-QTL (MQTL) analysis was done for yield-related traits in wheat. Candidate genes were identified within the refined MQTL and further validated by genotype-phenotype association analysis. Extensive studies have been undertaken on quantitative trait locus/loci (QTL) for wheat yield and its component traits. This study conducted a meta-analysis of 381 QTL related to wheat yield under various environments, including irrigated, drought- and/or heat-stressed conditions. Markers flanking meta-QTL (MQTL) were mapped on the wheat reference genome for their physical positions. Putative candidate genes were examined for MQTL with a physical interval of less than 20 Mbp. A total of 86 MQTL were identified as responsible for yield, of which 34 were for irrigated environments, 39 for drought-stressed environments, 36 for heat-stressed environments, and 23 for both drought- and heat-stressed environments. The high-confidence genes within the physical positions of the MQTL flanking markers were screened in the reference genome RefSeq V1.0, which identified 210 putative candidate genes. The phenotypic data for 14 contrasting genotypes with either high or low yield performance-according to the Australian National Variety Trials-were associated with their genotypic data obtained through ddRAD sequencing, which validated 18 genes or gene clusters associated with MQTL that had important roles for wheat yield. The detected and refined MQTL and candidate genes will be useful for marker-assisted selection of high yield in wheat breeding.
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Affiliation(s)
- Hui Liu
- School of Plant Biology, Faculty of Science and The UWA Institute of Agriculture, The University of Western Australia, Perth, WA, 6009, Australia
| | - Daniel Mullan
- InterGrain Pty Ltd, 19 Ambitious Link, Bibra Lake, WA, 6163, Australia
| | - Chi Zhang
- Beijing Genomics Institute, Shenzhen, 518053, China
| | - Shancen Zhao
- Beijing Genomics Institute, Shenzhen, 518053, China
| | - Xin Li
- The State Key Laboratory of Plant Cell and Chromosome Engineering, Institute of Genetics and Developmental Biology, Chicness Academy of Sciences, Beijing, 100101, China
| | - Aimin Zhang
- The State Key Laboratory of Plant Cell and Chromosome Engineering, Institute of Genetics and Developmental Biology, Chicness Academy of Sciences, Beijing, 100101, China
| | - Zhanyuan Lu
- Inner Mongolia Academy of Agricultural and Animal Husbandry Sciences, No. 22, Yuquan Qu Zhaojun Lu, Hohhot, Inner Mongolia Autonomous Region, China
| | - Yong Wang
- Wheat Research Institute, Gansu Academy of Agricultural Sciences, Lanzhou, 730070, China
| | - Guijun Yan
- School of Plant Biology, Faculty of Science and The UWA Institute of Agriculture, The University of Western Australia, Perth, WA, 6009, Australia.
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