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Lazare S, Golshmid P, Krassin A, Simhon E, Cohen TL, Dag A. Grafting of Cannabis - The effect of the rootstock on vegetative and reproductive indices of the scion. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2024:112210. [PMID: 39096974 DOI: 10.1016/j.plantsci.2024.112210] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/10/2024] [Revised: 07/28/2024] [Accepted: 07/31/2024] [Indexed: 08/05/2024]
Abstract
Among the commercial cannabis varieties, some are high yielders but characterized by a relatively poor root system. Roots absorb water and minerals from the soil, enabling vegetative development that directly affects yield, as vigorous plants have more resources to support reproduction. Moreover, healthy foliage is a primary key to high assimilation rates, leading to better production of photosynthetic products, including cannabinoids and terpenes, which are the main active components of cannabis. We grafted a high-THC variety, named 'Freud Super-Ego' (FSE) onto three chemotypes of rootstocks: high-THC (T), high-CBD (C), and Balanced (B). All the rootstocks had significantly greater root biomass compared to FSE. All the grafting treatments significantly improved FSE's vegetative indices and yield. The best overall vegetative performance - height, stem circumference, number of mature leaves - was that of plants grafted onto the Balanced and high-CBD rootstocks, resulting in high yields as well. However, the greatest number of inflorescences was counted when FSE was grafted onto a high-THC rootstock. According to leaf mineral content analysis, the highest nitrogen and phosphorus levels were found in leaves of FSE grafted on the balanced rootstock. The cannabinoid content profile analysis revealed that all grafting treatments raised the THC level in FSE's inflorescences by 8-12% in comparison to the non-grafted control, and the THC rootstock led to the highest THC level. The results indicate the importance of grafting in cannabis as a tool to increase the productivity and quality of the product.
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Affiliation(s)
- Silit Lazare
- RCK Science-based Cannabis Genetics, Ruhama, 7918000, Israel.
| | - Polina Golshmid
- RCK Science-based Cannabis Genetics, Ruhama, 7918000, Israel
| | - Adi Krassin
- RCK Science-based Cannabis Genetics, Ruhama, 7918000, Israel
| | - Ella Simhon
- RCK Science-based Cannabis Genetics, Ruhama, 7918000, Israel
| | | | - Arnon Dag
- Gilat Research Center, Agricultural Research Organization, M.P. Negev 8528000, Gilat, Israel
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Zhang X, Liu X, Wang L, Zhao Q, Yu Y, Du R, Xu Y, Zhen W, Wang Y. Wheat yield and grain-filling characteristics due to cultivar replacement in the Haihe Plain in China. FRONTIERS IN PLANT SCIENCE 2024; 15:1374453. [PMID: 39040512 PMCID: PMC11260742 DOI: 10.3389/fpls.2024.1374453] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/22/2024] [Accepted: 06/13/2024] [Indexed: 07/24/2024]
Abstract
Background The Haihe Plain plays an important role in wheat production and food security in China and has experienced continuous cultivar replacement since the 1950s.This study assessed the evolution of the yield and grain-filling characteristics of the main winter wheat cultivars in the Haihe Plain over the last seven decades (1950s to date). Methods Cultivar characterization indicated that the increase in yield was negatively affected by spike number and positively affected by the number of kernels per spike before the 2000s and kernel weight after the 2000s. Field trials were conducted across two ecological zones over two consecutive wheatgrowing seasons. The results showed that genetic gains in grain yield, spike number, and kernel weight during 1955 to 2021 were 0.629%, 0.574%, and 0.332% year-1 on a relative basis or 39.12 kg ha-1, 24,350 hm-2, and 0.15 g year-1 on an absolute basis, respectively. However, the increase in the kernel number per spike was not significant. Moreover, cultivar replacement explained 25.6%, 12.8%, and 37.5% of the total variance in grain yield, spike number, and kernel weight, respectively. In summary, during the initial grain-filling stage, wheat cultivar replacement led to the shortening of grain-filling duration and rapid grain-filling rate. However, a longer active grain-filling duration was produced by prolonged durations of rapid and late grain-filling. Additionally, the experimental year had a greater effect on the kernel number, which explained 53.2% of the total variance. Ultimately, modern wheat cultivars had a greater kernel weight. Results Although the increase in kernel weight has affected grain yield during cultivar replacements in the Haihe Plain, the potential for further yield increase through kernel weight enhancement alone is limited. Consequently, future breeding efforts and cultivation practices should focus on improving spike traits and canopy architecture to enhance productivity.
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Affiliation(s)
- Xuecheng Zhang
- College of Agronomy, Hebei Agricultural University, State Key Laboratory of North China Crop Improvement and Regulation, Key Laboratory of North China Water–saving Agriculture, Ministry of Agriculture and Rural Affairs, Key Laboratory of Crop Growth Regulation of Hebei Province, Baoding, Hebei, China
| | - Xiaoli Liu
- College of Agronomy, Hebei Agricultural University, State Key Laboratory of North China Crop Improvement and Regulation, Key Laboratory of North China Water–saving Agriculture, Ministry of Agriculture and Rural Affairs, Key Laboratory of Crop Growth Regulation of Hebei Province, Baoding, Hebei, China
| | - Li Wang
- College of Agronomy, Hebei Agricultural University, State Key Laboratory of North China Crop Improvement and Regulation, Key Laboratory of North China Water–saving Agriculture, Ministry of Agriculture and Rural Affairs, Key Laboratory of Crop Growth Regulation of Hebei Province, Baoding, Hebei, China
| | - Qiancheng Zhao
- College of Agronomy, Hebei Agricultural University, State Key Laboratory of North China Crop Improvement and Regulation, Key Laboratory of North China Water–saving Agriculture, Ministry of Agriculture and Rural Affairs, Key Laboratory of Crop Growth Regulation of Hebei Province, Baoding, Hebei, China
| | - Yang Yu
- College of Agronomy, Hebei Agricultural University, State Key Laboratory of North China Crop Improvement and Regulation, Key Laboratory of North China Water–saving Agriculture, Ministry of Agriculture and Rural Affairs, Key Laboratory of Crop Growth Regulation of Hebei Province, Baoding, Hebei, China
| | - Ruirui Du
- College of Agronomy, Hebei Agricultural University, State Key Laboratory of North China Crop Improvement and Regulation, Key Laboratory of North China Water–saving Agriculture, Ministry of Agriculture and Rural Affairs, Key Laboratory of Crop Growth Regulation of Hebei Province, Baoding, Hebei, China
| | - Yadong Xu
- College of Agricultural Sciences, Zhengzhou University, Zhengzhou, Henan, China
| | - Wenchao Zhen
- College of Agronomy, Hebei Agricultural University, State Key Laboratory of North China Crop Improvement and Regulation, Key Laboratory of North China Water–saving Agriculture, Ministry of Agriculture and Rural Affairs, Key Laboratory of Crop Growth Regulation of Hebei Province, Baoding, Hebei, China
| | - Yandong Wang
- College of Agronomy, Hebei Agricultural University, State Key Laboratory of North China Crop Improvement and Regulation, Key Laboratory of North China Water–saving Agriculture, Ministry of Agriculture and Rural Affairs, Key Laboratory of Crop Growth Regulation of Hebei Province, Baoding, Hebei, China
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Amissah S, Ankomah G, Lee RD, Perry CD, Washington BJ, Porter WM, Virk S, Bryant CJ, Vellidis G, Harris GH, Cabrera M, Franklin DH, Diaz-Perez JC, Sintim HY. Assessing corn recovery from early season nutrient stress under different soil moisture regimes. FRONTIERS IN PLANT SCIENCE 2024; 15:1344022. [PMID: 38510438 PMCID: PMC10950915 DOI: 10.3389/fpls.2024.1344022] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/24/2023] [Accepted: 02/20/2024] [Indexed: 03/22/2024]
Abstract
Corn (Zea mays) biomass accumulation and nutrient uptake by the six-leaf collar (V6) growth stage are low, and therefore, synchronizing nutrient supply with crop demand could potentially minimize nutrient loss and improve nutrient use efficiency. Knowledge of corn's response to nutrient stress in the early growth stages could inform such nutrient management. Field studies were conducted to assess corn recovery from when no fertilizer application is made until the V6 growth stage, and thereafter, applying fertilizer rates as those in non-stressed conditions. The early season nutrient stress and non-stress conditions received the same amount of nutrients. As the availability of nutrients for plant uptake is largely dependent on soil moisture, corn recovery from the early season nutrient stress was assessed under different soil moisture regimes induced via irrigation scheduling at 50% and 80% field capacity under overhead and subsurface drip irrigation (SSDI) systems. Peanut (Arachis hypogaea) was the previous crop under all conditions, and the fields were under cereal rye (Secale cereale) cover crop prior to planting corn. At the V6 growth stage, the nutrient concentrations of the early season-stressed crops, except for copper, were above the minimum threshold of sufficiency ranges reported for corn. However, the crops showed poor growth, with biomass accumulation being reduced by over 50% compared to non-stressed crops. Also, the uptake of all nutrients was significantly lower under the early season nutrient stress conditions. The recovery of corn from the early season nutrient stress was low. Compared to non-stress conditions, the early season nutrient stress caused 1.58 Mg ha-1 to 3.4 Mg ha-1 yield reduction. The percent yield reduction under the SSDI system was 37.6-38.2% and that under the overhead irrigation system was 11.7-13%. The high yield reduction from the early season nutrient stress under the SSDI system was because of water stress conditions in the topsoil soil layer. The findings of the study suggest ample nutrient supply in the early season growth stage is critical for corn production, and thus, further studies are recommended to determine the optimum nutrient supply for corn at the initial growth stages.
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Affiliation(s)
- Solomon Amissah
- Department of Crop and Soil Sciences, University of Georgia, Tifton, GA, United States
| | - Godfred Ankomah
- Department of Crop and Soil Sciences, University of Georgia, Tifton, GA, United States
| | - Robert D. Lee
- Department of Crop and Soil Sciences, University of Georgia, Tifton, GA, United States
| | - Calvin D. Perry
- C. M. Stripling Irrigation Research Park, University of Georgia, Camilla, GA, United States
| | - Bobby J. Washington
- C. M. Stripling Irrigation Research Park, University of Georgia, Camilla, GA, United States
| | - Wesley M. Porter
- Department of Crop and Soil Sciences, University of Georgia, Tifton, GA, United States
| | - Simerjeet Virk
- Department of Crop and Soil Sciences, University of Georgia, Tifton, GA, United States
| | - Corey J. Bryant
- Department of Crop and Soil Sciences, University of Georgia, Tifton, GA, United States
- Delta Research and Extension Center, Mississippi State University, Stoneville, MS, United States
| | - George Vellidis
- Department of Crop and Soil Sciences, University of Georgia, Tifton, GA, United States
| | - Glendon H. Harris
- Department of Crop and Soil Sciences, University of Georgia, Tifton, GA, United States
| | - Miguel Cabrera
- Department of Crop and Soil Sciences, University of Georgia, Athens, GA, United States
| | - Dorcas H. Franklin
- Department of Crop and Soil Sciences, University of Georgia, Athens, GA, United States
| | - Juan C. Diaz-Perez
- Department of Horticulture, University of Georgia, Tifton, GA, United States
| | - Henry Y. Sintim
- Department of Crop and Soil Sciences, University of Georgia, Tifton, GA, United States
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Gui YW, Batool A, El-Keblawy A, Sheteiwy MS, Yang YM, Zhao L, Duan HX, Chang SJ, Xiong YC. Response of source-sink relationship to progressive water deficit in the domestication of dryland wheat. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2024; 207:108380. [PMID: 38244389 DOI: 10.1016/j.plaphy.2024.108380] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/23/2023] [Revised: 01/13/2024] [Accepted: 01/16/2024] [Indexed: 01/22/2024]
Abstract
It is crucial to clarify the physiological responses of wheat (T. aestivum) plants to source-sink manipulation and assimilation transportation under drought stress during domestication of dryland wheat. In this research, a two-year field experiment was conducted using nine wheat cultivars in a semiarid site of northwest China. The source-sink manipulation treatments including defoliation of flag leaves and 50% removal of ears were applied at the anthesis stage under two levels of drought stress conditions i.e. progressive water supply (PWS) and rainfed drought treatment (RDT). Our results indicated that drought stress reduced the dry weight of leaves, sheaths and stems, as well as caused a significant yield reduction. High ploidy wheat exhibits a greater capacity to sustain higher grain yields when subjected to drought stress, primarily due to its stronger buffer capacity between source supply and sink demand. All wheat species with different ploidy levels had a certain degree of source limitation and sink restriction. During the domestication of wheat, the type of source and sink might be ploidy-dependent with progressive water deficit, but similar interactive relationships. The source-sink ratio of tetraploid species was the largest, while that of hexaploid species was the lowest.
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Affiliation(s)
- Yan-Wen Gui
- Department of Bioengineering, School of Biological and Pharmaceutical Engineering, Lanzhou Jiaotong University, Lanzhou, 730070, China
| | - Asfa Batool
- State Key Laboratory of Herbage Improvement and Grassland Agro-ecosystems, College of Ecology, Lanzhou University, Lanzhou, 730000, Gansu, China
| | - Ali El-Keblawy
- Department of Integrative Agriculture, College of Agriculture and Veterinary Medicine, United Arab, Emirates University, Al-Ain, Abu-Dhabi, UAE
| | - Mohamed S Sheteiwy
- Department of Integrative Agriculture, College of Agriculture and Veterinary Medicine, United Arab, Emirates University, Al-Ain, Abu-Dhabi, UAE; Department of Agronomy, Faculty of Agriculture, Mansoura University, Mansoura, 35516, Egypt
| | - Yu-Miao Yang
- Institute of Biology, Gansu Academy of Sciences, Lanzhou, 730000, China
| | - Ling Zhao
- State Key Laboratory of Herbage Improvement and Grassland Agro-ecosystems, College of Ecology, Lanzhou University, Lanzhou, 730000, Gansu, China
| | - Hai-Xia Duan
- State Key Laboratory of Herbage Improvement and Grassland Agro-ecosystems, College of Ecology, Lanzhou University, Lanzhou, 730000, Gansu, China; State Key Laboratory of Plateau Ecology and Agriculture, Qinghai University, Xining, 810016, China
| | - Si-Jing Chang
- Department of Bioengineering, School of Biological and Pharmaceutical Engineering, Lanzhou Jiaotong University, Lanzhou, 730070, China
| | - You-Cai Xiong
- State Key Laboratory of Herbage Improvement and Grassland Agro-ecosystems, College of Ecology, Lanzhou University, Lanzhou, 730000, Gansu, China.
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Alikhani-Koupaei M, Ehtesham Nia A. Reducing the sink/source ratio of on-date palm plants during fruit growth has physiological and biochemical impacts on the shift in source-sink limitations. JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE 2023; 103:7104-7116. [PMID: 37332084 DOI: 10.1002/jsfa.12795] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/26/2022] [Revised: 05/10/2023] [Accepted: 06/19/2023] [Indexed: 06/20/2023]
Abstract
BACKGROUND The present study examined the impact of reducing the 'sink' on the 'source' in On-palms with a bunch number greater than eight. The capacity of leaves and fruit, as well as assimilate loading and unloading in phloem, restrict plant growth and yield. The study evaluated yield components, as well as photosynthetic and hormonal feedback, resulting from source-sink relationships. RESULTS During the mid-Kimri, removing bunches from On-trees stabilized yield components and fruit size, suggesting that On-trees have a sink limitation. Bunch thinning boosted these indicators compared to normal trees with a bunch number between six and eight inclusive, indicating that On-trees had source limitations. In mid-Khalal, the treatments presented a type of source and sink limitation that is opposite to mid-Kimri. The thinning techniques addressed the source-sink limitation by adjusting the additional carbon allocation. This resulted in an increase of non-reducing sugars and starch in different organs, whereas reducing sugars decreased. These adjustments were made to reduce sucrose-phosphate synthase and sucrose synthase activity, raising invertase activity, lowering indole-3-acetic acid, zeatin, gibberellin, and abscisic acid hormone levels in fruits, as well as lowering trehalose production in organs. Levels of hormones, enzymes, and trehalose showed less variation during bunch thinning and source limitation compared to bunch removal and sink limitation. CONCLUSION At Rutab, thinning types demonstrated the source limitation of On-trees. Bunch removal and bunch thinning by removing the source-sink limitation had the greatest effect on increasing yield components and fruit size, respectively. To improve the quality and quantity of fruit, it is important to use both thinning techniques simultaneously. © 2023 Society of Chemical Industry.
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Affiliation(s)
- Majid Alikhani-Koupaei
- Department of Plant Production Technology, Faculty of Agriculture, Higher Education Complex of Saravan, Saravan, Iran
| | - Abdollah Ehtesham Nia
- Department of Horticultural Sciences, Faculty of Agriculture, Lorestan University, Khorramabad, Iran
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Pinky, Jain R, Yadav A, Sharma R, Dhaka N. Emerging roles of long non-coding RNAs in regulating agriculturally important seed traits. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2023; 203:108019. [PMID: 37714026 DOI: 10.1016/j.plaphy.2023.108019] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/05/2023] [Revised: 07/26/2023] [Accepted: 09/06/2023] [Indexed: 09/17/2023]
Abstract
Seeds have enormous economic importance as source of calories, nutrition, edible oil, and biofuels. Therefore, seed traits like seed size and shape, weight, micronutrient content, oil content, quality, post-harvest sprouting, etc., are some of the main targets in crop improvement. Designing the strategies for their improvement benefits heavily from understanding the regulatory aspects of seed development. Recent studies indicate that long non-coding RNAs (lncRNAs) are one of the important regulators of seed development. They played a significant role in crop domestication by influencing seed traits. LncRNAs are conventionally defined as non-coding RNAs greater than 200 bp in length but lacking protein coding potential. Here we highlight the emerging pieces of evidence of lncRNA-mediated regulation of seed development through diverse mechanisms, for instance, by acting as target mimics or precursors of regulatory small RNAs or through chromatin remodeling and post-transcriptional repression. We also enumerate the insights from high-throughput transcriptomic studies from developing seeds of cereal, oilseed, biofuel, and pulse crops. We highlight the lncRNA candidates and lncRNA-mediated regulatory networks regulating seed development and related agronomic traits. Further, we discuss the potential of lncRNAs for improvement of agriculturally important seed traits through marker-assisted breeding and/or transgenic approaches.
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Affiliation(s)
- Pinky
- Department of Biotechnology, School of Interdisciplinary and Applied Sciences, Central University of Haryana, Mahendergarh, Haryana, India
| | - Rubi Jain
- School of Computational and Integrative Sciences, Jawaharlal Nehru University, New Delhi, India
| | - Abhinandan Yadav
- Department of Biotechnology, School of Interdisciplinary and Applied Sciences, Central University of Haryana, Mahendergarh, Haryana, India
| | - Rita Sharma
- Department of Biological Sciences, Birla Institute of Technology and Science (BITS), Pilani, Rajasthan, India
| | - Namrata Dhaka
- Department of Biotechnology, School of Interdisciplinary and Applied Sciences, Central University of Haryana, Mahendergarh, Haryana, India.
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Jiang Z, Yang H, Zhu M, Wu L, Yan F, Qian H, He W, Liu D, Chen H, Chen L, Ding Y, Sakr S, Li G. The Inferior Grain Filling Initiation Promotes the Source Strength of Rice Leaves. RICE (NEW YORK, N.Y.) 2023; 16:41. [PMID: 37715876 PMCID: PMC10505135 DOI: 10.1186/s12284-023-00656-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/31/2023] [Accepted: 08/22/2023] [Indexed: 09/18/2023]
Abstract
Poor grain-filling initiation in inferior spikelets severely impedes rice yield improvement, while photo-assimilates from source leaves can greatly stimulate the initiation of inferior grain-filling (sink). To investigate the underlying mechanism of source-sink interaction, a two-year field experiment was conducted in 2019 and 2020 using two large-panicle rice cultivars (CJ03 and W1844). The treatments included intact panicles and partial spikelet removal. These two cultivars showed no significant difference in the number of spikelets per panicle. However, after removing spikelet, W1844 showed higher promotion on 1000-grain weight and seed-setting rate than CJ03, particularly for inferior spikelets. The reason was that the better sink activity of W1844 led to a more effective initiation of inferior grain-filling compared to CJ03. The inferior grain weight of CJ03 and W1844 did not show a significant increase until 8 days poster anthesis (DPA), which follows a similar pattern to the accumulation of photo-assimilates in leaves. After removing spikelets, the source leaves of W1844 exhibited lower photosynthetic inhibition compared to CJ03, as well as stronger metabolism and transport of photo-assimilates. Although T6P levels remained constant in both cultivars under same conditions, the source leaves of W1844 showed notable downregulation of SnRK1 activity and upregulation of phytohormones (such as abscisic acid, cytokinins, and auxin) after removing spikelets. Hence, the high sink strength of inferior spikelets plays a role in triggering the enhancement of source strength in rice leaves, thereby fulfilling grain-filling initiation demands.
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Affiliation(s)
- Zhengrong Jiang
- Sanya Institute of Nanjing Agriculture, Jiangsu Collaborative Innovation Center for Modern Crop Production, Key Laboratory of Crop Physiology Ecology and Production Management, Nanjing Agricultural University, Sanya, 572000, China
- China- Kenya Belt and Road Joint Laboratory on Crop Molecular Biology, Nanjing, 210095, China
- Institut Agro, University of Angers, INRAE, IRHS, SFR 4207 QUASAV, Angers, 49000, France
| | - Hongyi Yang
- Sanya Institute of Nanjing Agriculture, Jiangsu Collaborative Innovation Center for Modern Crop Production, Key Laboratory of Crop Physiology Ecology and Production Management, Nanjing Agricultural University, Sanya, 572000, China
- China- Kenya Belt and Road Joint Laboratory on Crop Molecular Biology, Nanjing, 210095, China
| | - Meichen Zhu
- Sanya Institute of Nanjing Agriculture, Jiangsu Collaborative Innovation Center for Modern Crop Production, Key Laboratory of Crop Physiology Ecology and Production Management, Nanjing Agricultural University, Sanya, 572000, China
- China- Kenya Belt and Road Joint Laboratory on Crop Molecular Biology, Nanjing, 210095, China
| | - Longmei Wu
- Rice Research Institute, Guangdong Academy of Agricultural Sciences, Guangzhou, 510640, China
| | - Feiyu Yan
- School of Life Sciences and Food Engineering, Huaiyin Institute of Technology, Huai'an, 223003, China
| | - Haoyu Qian
- Sanya Institute of Nanjing Agriculture, Jiangsu Collaborative Innovation Center for Modern Crop Production, Key Laboratory of Crop Physiology Ecology and Production Management, Nanjing Agricultural University, Sanya, 572000, China
- China- Kenya Belt and Road Joint Laboratory on Crop Molecular Biology, Nanjing, 210095, China
| | - Wenjun He
- Sanya Institute of Nanjing Agriculture, Jiangsu Collaborative Innovation Center for Modern Crop Production, Key Laboratory of Crop Physiology Ecology and Production Management, Nanjing Agricultural University, Sanya, 572000, China
- China- Kenya Belt and Road Joint Laboratory on Crop Molecular Biology, Nanjing, 210095, China
| | - Dun Liu
- Sanya Institute of Nanjing Agriculture, Jiangsu Collaborative Innovation Center for Modern Crop Production, Key Laboratory of Crop Physiology Ecology and Production Management, Nanjing Agricultural University, Sanya, 572000, China
- China- Kenya Belt and Road Joint Laboratory on Crop Molecular Biology, Nanjing, 210095, China
| | - Hong Chen
- Sanya Institute of Nanjing Agriculture, Jiangsu Collaborative Innovation Center for Modern Crop Production, Key Laboratory of Crop Physiology Ecology and Production Management, Nanjing Agricultural University, Sanya, 572000, China
- China- Kenya Belt and Road Joint Laboratory on Crop Molecular Biology, Nanjing, 210095, China
| | - Lin Chen
- Sanya Institute of Nanjing Agriculture, Jiangsu Collaborative Innovation Center for Modern Crop Production, Key Laboratory of Crop Physiology Ecology and Production Management, Nanjing Agricultural University, Sanya, 572000, China
- China- Kenya Belt and Road Joint Laboratory on Crop Molecular Biology, Nanjing, 210095, China
| | - Yanfeng Ding
- Sanya Institute of Nanjing Agriculture, Jiangsu Collaborative Innovation Center for Modern Crop Production, Key Laboratory of Crop Physiology Ecology and Production Management, Nanjing Agricultural University, Sanya, 572000, China
- China- Kenya Belt and Road Joint Laboratory on Crop Molecular Biology, Nanjing, 210095, China
| | - Soulaiman Sakr
- Institut Agro, University of Angers, INRAE, IRHS, SFR 4207 QUASAV, Angers, 49000, France
| | - Ganghua Li
- Sanya Institute of Nanjing Agriculture, Jiangsu Collaborative Innovation Center for Modern Crop Production, Key Laboratory of Crop Physiology Ecology and Production Management, Nanjing Agricultural University, Sanya, 572000, China.
- China- Kenya Belt and Road Joint Laboratory on Crop Molecular Biology, Nanjing, 210095, China.
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Xue X, Beuchat G, Wang J, Yu YC, Moose S, Chen J, Chen LQ. Sugar accumulation enhancement in sorghum stem is associated with reduced reproductive sink strength and increased phloem unloading activity. FRONTIERS IN PLANT SCIENCE 2023; 14:1233813. [PMID: 37767289 PMCID: PMC10519796 DOI: 10.3389/fpls.2023.1233813] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/02/2023] [Accepted: 08/21/2023] [Indexed: 09/29/2023]
Abstract
Sweet sorghum has emerged as a promising source of bioenergy mainly due to its high biomass and high soluble sugar yield in stems. Studies have shown that loss-of-function Dry locus alleles have been selected during sweet sorghum domestication, and decapitation can further boost sugar accumulation in sweet sorghum, indicating that the potential for improving sugar yields is yet to be fully realized. To maximize sugar accumulation, it is essential to gain a better understanding of the mechanism underlying the massive accumulation of soluble sugars in sweet sorghum stems in addition to the Dry locus. We performed a transcriptomic analysis upon decapitation of near-isogenic lines for mutant (d, juicy stems, and green leaf midrib) and functional (D, dry stems and white leaf midrib) alleles at the Dry locus. Our analysis revealed that decapitation suppressed photosynthesis in leaves, but accelerated starch metabolic processes in stems. SbbHLH093 negatively correlates with sugar levels supported by genotypes (DD vs. dd), treatments (control vs. decapitation), and developmental stages post anthesis (3d vs.10d). D locus gene SbNAC074A and other programmed cell death-related genes were downregulated by decapitation, while sugar transporter-encoding gene SbSWEET1A was induced. Both SbSWEET1A and Invertase 5 were detected in phloem companion cells by RNA in situ assay. Loss of the SbbHLH093 homolog, AtbHLH093, in Arabidopsis led to a sugar accumulation increase. This study provides new insights into sugar accumulation enhancement in bioenergy crops, which can be potentially achieved by reducing reproductive sink strength and enhancing phloem unloading.
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Affiliation(s)
- Xueyi Xue
- Department of Energy (DOE) Center for Advanced Bioenergy and Bioproducts Innovation, University of Illinois at Urbana-Champaign, Urbana, IL, United States
- Institute for Sustainability, Energy, and Environment, University of Illinois at Urbana-Champaign, Urbana, IL, United States
- Department of Plant Biology, University of Illinois at Urbana-Champaign, Urbana, IL, United States
| | - Gabriel Beuchat
- Department of Energy (DOE) Center for Advanced Bioenergy and Bioproducts Innovation, University of Illinois at Urbana-Champaign, Urbana, IL, United States
- Department of Plant Biology, University of Illinois at Urbana-Champaign, Urbana, IL, United States
| | - Jiang Wang
- Department of Energy (DOE) Center for Advanced Bioenergy and Bioproducts Innovation, University of Illinois at Urbana-Champaign, Urbana, IL, United States
- Department of Plant Biology, University of Illinois at Urbana-Champaign, Urbana, IL, United States
| | - Ya-Chi Yu
- Department of Energy (DOE) Center for Advanced Bioenergy and Bioproducts Innovation, University of Illinois at Urbana-Champaign, Urbana, IL, United States
- Department of Plant Biology, University of Illinois at Urbana-Champaign, Urbana, IL, United States
| | - Stephen Moose
- Department of Energy (DOE) Center for Advanced Bioenergy and Bioproducts Innovation, University of Illinois at Urbana-Champaign, Urbana, IL, United States
- Department of Crop Sciences, University of Illinois at Urbana-Champaign, Urbana, IL, United States
| | - Jin Chen
- Institute for Biomedical Informatics, University of Kentucky, Lexington, KY, United States
| | - Li-Qing Chen
- Department of Energy (DOE) Center for Advanced Bioenergy and Bioproducts Innovation, University of Illinois at Urbana-Champaign, Urbana, IL, United States
- Department of Plant Biology, University of Illinois at Urbana-Champaign, Urbana, IL, United States
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Ahn E, Botkin J, Curtin SJ, Zsögön A. Ideotype breeding and genome engineering for legume crop improvement. Curr Opin Biotechnol 2023; 82:102961. [PMID: 37331239 DOI: 10.1016/j.copbio.2023.102961] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2022] [Revised: 12/20/2022] [Accepted: 05/22/2023] [Indexed: 06/20/2023]
Abstract
Ideotype breeding is a strategy whereby traits are modeled a priori and then introduced into a model or crop species to assess their impact on yield. Thus, knowledge about the connection between genotype and phenotype is required for ideotype breeding to be deployed successfully. The growing understanding of the genetic basis of yield-related traits, combined with increasingly efficient genome engineering tools, improved transformation efficiency, and high-throughput genotyping of regenerants paves the way for the widespread adoption of ideotype breeding as a complement to conventional breeding. We briefly discuss how ideotype breeding, coupled with such state-of-the-art biotechnological tools, could contribute to knowledge-based legume breeding and accelerate yield gains to ensure food security in the coming decades.
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Affiliation(s)
- Ezekiel Ahn
- United States Department of Agriculture, Plant Science Research Unit, St Paul, MN 55108, USA
| | - Jacob Botkin
- Department of Plant Pathology, University of Minnesota, St. Paul, MN 55108, USA
| | - Shaun J Curtin
- United States Department of Agriculture, Plant Science Research Unit, St Paul, MN 55108, USA; Department of Agronomy and Plant Genetics, University of Minnesota, St. Paul, MN 55108, USA; Center for Plant Precision Genomics, University of Minnesota, St. Paul, MN 55108, USA; Center for Genome Engineering, University of Minnesota, St. Paul, MN 55108, USA
| | - Agustin Zsögön
- Departamento de Biologia Vegetal, Universidade Federal de Viçosa, Viçosa 36570-900, MG, Brazil.
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10
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Chai L, Wang H, Yu H, Pang E, Lu T, Li Y, Jiang W, Li Q. Girdling promotes tomato fruit enlargement by enhancing fruit sink strength and triggering cytokinin accumulation. FRONTIERS IN PLANT SCIENCE 2023; 14:1174403. [PMID: 37396637 PMCID: PMC10312241 DOI: 10.3389/fpls.2023.1174403] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/26/2023] [Accepted: 05/24/2023] [Indexed: 07/04/2023]
Abstract
Girdling is a horticultural technique that enhances fruit size by allocating more carbohydrates to fruits, yet its underlying mechanisms are not fully understood. In this study, girdling was applied to the main stems of tomato plants 14 days after anthesis. Following girdling, there was a significant increase in fruit volume, dry weight, and starch accumulation. Interestingly, although sucrose transport to the fruit increased, the fruit's sucrose concentration decreased. Girdling also led to an increase in the activities of enzymes involved in sucrose hydrolysis and AGPase, and to an upregulation in the expression of key genes related to sugar transport and utilization. Moreover, the assay of carboxyfluorescein (CF) signal in detached fruit indicated that girdled fruits exhibited a greater ability to take up carbohydrates. These results indicate that girdling improves sucrose unloading and sugar utilization in fruit, thereby enhancing fruit sink strength. In addition, girdling induced cytokinin (CK) accumulation, promoted cell division in the fruit, and upregulated the expression of genes related to CK synthesis and activation. Furthermore, the results of a sucrose injection experiment suggested that increased sucrose import induced CK accumulation in the fruit. This study sheds light on the mechanisms by which girdling promotes fruit enlargement and provides novel insights into the interaction between sugar import and CK accumulation.
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Affiliation(s)
| | | | | | | | | | | | | | - Qiang Li
- *Correspondence: Qiang Li, ; Weijie Jiang,
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11
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Li L, Li Q, Chen B, Wang J, Ding F, Wang P, Zhang X, Hou J, Luo R, Li X, Zheng J, Yang S, Yang L, Zhu L, Sun S, Ma C, Li Q, Li Y, Hu J. Identification of candidate genes that regulate the trade-off between seedling cold tolerance and fruit quality in melon ( Cucumis melo L.). HORTICULTURE RESEARCH 2023; 10:uhad093. [PMID: 37416729 PMCID: PMC10321389 DOI: 10.1093/hr/uhad093] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/15/2022] [Accepted: 05/01/2023] [Indexed: 07/08/2023]
Abstract
Trade-offs between survival and growth are widely observed in plants. Melon is an annual, trailing herb that produces economically valuable fruits that are traditionally cultivated in early spring in China. Melon seedlings are sensitive to low temperatures, and thus usually suffer from cold stress during the early growth period. However, little is known about the mechanism behind the trade-offs between seedling cold tolerance and fruit quality in melon. In this study, a total of 31 primary metabolites were detected from the mature fruits of eight melon lines that differ with respect to seedling cold tolerance; these included 12 amino acids, 10 organic acids, and 9 soluble sugars. Our results showed that concentrations of most of the primary metabolites in the cold-resistant melons were generally lower than in the cold-sensitive melons; the greatest difference in metabolite levels was observed between the cold-resistant line H581 and the moderately cold-resistant line HH09. The metabolite and transcriptome data for these two lines were then subjected to weighted correlation network analysis, resulting in the identification of five key candidate genes underlying the balancing between seedling cold tolerance and fruit quality. Among these genes, CmEAF7 might play multiple roles in regulating chloroplast development, photosynthesis, and the ABA pathway. Furthermore, multi-method functional analysis showed that CmEAF7 can certainly improve both seedling cold tolerance and fruit quality in melon. Our study identified an agriculturally important gene, CmEAF7, and provides a new insight into breeding methods to develop melon cultivars with seedling cold tolerance and high fruit quality.
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Affiliation(s)
- Lili Li
- College of Horticulture, Henan Agricultural University, Zhengzhou 450002, China
| | - Qiong Li
- College of Horticulture, Henan Agricultural University, Zhengzhou 450002, China
| | - Bin Chen
- College of Horticulture, Henan Agricultural University, Zhengzhou 450002, China
| | - Jiyu Wang
- College of Horticulture, Henan Agricultural University, Zhengzhou 450002, China
| | - Fei Ding
- College of Horticulture, Henan Agricultural University, Zhengzhou 450002, China
| | - Panqiao Wang
- College of Horticulture, Henan Agricultural University, Zhengzhou 450002, China
| | - Xiuyue Zhang
- College of Horticulture, Henan Agricultural University, Zhengzhou 450002, China
| | - Juan Hou
- College of Horticulture, Henan Agricultural University, Zhengzhou 450002, China
| | - Renren Luo
- College of Horticulture, Henan Agricultural University, Zhengzhou 450002, China
| | - Xiang Li
- College of Horticulture, Henan Agricultural University, Zhengzhou 450002, China
| | - Jingwen Zheng
- College of Horticulture, Henan Agricultural University, Zhengzhou 450002, China
| | - Sen Yang
- College of Horticulture, Henan Agricultural University, Zhengzhou 450002, China
| | - Luming Yang
- College of Horticulture, Henan Agricultural University, Zhengzhou 450002, China
| | - Lei Zhu
- College of Horticulture, Henan Agricultural University, Zhengzhou 450002, China
| | - Shouru Sun
- College of Horticulture, Henan Agricultural University, Zhengzhou 450002, China
| | - Changsheng Ma
- College of Horticulture, Henan Agricultural University, Zhengzhou 450002, China
| | - Qin Li
- The Seed Management Station of Zhengzhou City, Zhengzhou 450001, China
| | - Ying Li
- College of Horticulture, Henan Agricultural University, Zhengzhou 450002, China
| | - Jianbin Hu
- College of Horticulture, Henan Agricultural University, Zhengzhou 450002, China
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12
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Ramírez-Olvera SM, Sandoval-Villa M. Uses, Botanical Characteristics, and Phenological Development of Slender Nightshade ( Solanum nigrescens Mart. and Gal.). PLANTS (BASEL, SWITZERLAND) 2023; 12:1645. [PMID: 37111868 PMCID: PMC10145186 DOI: 10.3390/plants12081645] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/13/2023] [Revised: 04/08/2023] [Accepted: 04/10/2023] [Indexed: 06/19/2023]
Abstract
Slender nightshade (Solanum nigrescens Mart. and Gal.) is a perennial, herbaceous plant from the Solanaceae family, which is distributed in various environments. The aim of this study was to review the scientific literature and to establish slender nightshade plants under greenhouse conditions in order to record their phenological development. The specialized literature regarding the distribution, botanical characteristics, and uses of such species was analyzed. The phenological development was recorded based on the BBCH (Biologische Bundesanstalt, Bundessortenamt, Chemische Industrie) guide. Slender nightshade seeds were germinated under greenhouse conditions, then transferred to red porous volcano gravel locally known as tezontle in black polyethylene bags and watered with a Steiner nutrient solution. Changes in phenology were monitored and recorded from germination to the ripening of fruit and seeds. Slender nightshade has a wide distribution in Mexico and is used for medicinal and gastronomical purposes, as well as to control pathogens. The phenological development of slender nightshade has seven stages from germination to the ripening of fruit and seeds. Slender nightshade is a poorly studied plant with potential for human consumption. The phenological recording provides a tool for its management and further research as a crop.
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13
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Bathe U, Leong BJ, Van Gelder K, Barbier GG, Henry CS, Amthor JS, Hanson AD. Respiratory energy demands and scope for demand expansion and destruction. PLANT PHYSIOLOGY 2023; 191:2093-2103. [PMID: 36271857 PMCID: PMC10069906 DOI: 10.1093/plphys/kiac493] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/01/2022] [Accepted: 10/09/2022] [Indexed: 06/16/2023]
Abstract
Nonphotosynthetic plant metabolic processes are powered by respiratory energy, a limited resource that metabolic engineers—like plants themselves—must manage prudently.
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Affiliation(s)
| | | | | | | | - Christopher S Henry
- Mathematics and Computer Science Division, Argonne National Laboratory, Argonne, Illinois 60439, USA
| | - Jeffrey S Amthor
- Northern Arizona University Center for Ecosystem Science and Society, Flagstaff, Arizona 86011, USA
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14
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Ma B, Zhang L, He Z. Understanding the regulation of cereal grain filling: The way forward. JOURNAL OF INTEGRATIVE PLANT BIOLOGY 2023; 65:526-547. [PMID: 36648157 DOI: 10.1111/jipb.13456] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/30/2022] [Accepted: 01/17/2023] [Indexed: 06/17/2023]
Abstract
During grain filling, starch and other nutrients accumulate in the endosperm; this directly determines grain yield and grain quality in crops such as rice (Oryza sativa), maize (Zea mays), and wheat (Triticum aestivum). Grain filling is a complex trait affected by both intrinsic and environmental factors, making it difficult to explore the underlying genetics, molecular regulation, and the application of these genes for breeding. With the development of powerful genetic and molecular techniques, much has been learned about the genes and molecular networks related to grain filling over the past decades. In this review, we highlight the key factors affecting grain filling, including both biological and abiotic factors. We then summarize the key genes controlling grain filling and their roles in this event, including regulators of sugar translocation and starch biosynthesis, phytohormone-related regulators, and other factors. Finally, we discuss how the current knowledge of valuable grain filling genes could be integrated with strategies for breeding cereal varieties with improved grain yield and quality.
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Affiliation(s)
- Bin Ma
- National Key Laboratory of Plant Molecular Genetics, CAS Center for Excellence in Molecular Plant Sciences, Institute of Plant Physiology & Ecology, Chinese Academy of Sciences, Shanghai, 200032, China
| | - Lin Zhang
- Joint International Research Laboratory of Agriculture and Agri-Product Safety of the Ministry of Education, Yangzhou University, Yangzhou, 225009, China
- Jiangsu Co-Innovation Center for Modern Production Technology of Grain Crops, Yangzhou University, Yangzhou, 225009, China
| | - Zuhua He
- National Key Laboratory of Plant Molecular Genetics, CAS Center for Excellence in Molecular Plant Sciences, Institute of Plant Physiology & Ecology, Chinese Academy of Sciences, Shanghai, 200032, China
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15
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The Strigolactone Pathway Is a Target for Modifying Crop Shoot Architecture and Yield. BIOLOGY 2023; 12:biology12010095. [PMID: 36671787 PMCID: PMC9855930 DOI: 10.3390/biology12010095] [Citation(s) in RCA: 10] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/30/2022] [Revised: 01/05/2023] [Accepted: 01/05/2023] [Indexed: 01/11/2023]
Abstract
Due to their sessile nature, plants have developed the ability to adapt their architecture in response to their environment. Branching is an integral component of plant architecture, where hormonal signals tightly regulate bud outgrowth. Strigolactones (SLs), being a novel class of phytohormone, are known to play a key role in branching decisions, where they act as a negative regulator of bud outgrowth. They can achieve this by modulating polar auxin transport to interrupt auxin canalisation, and independently of auxin by acting directly within buds by promoting the key branching inhibitor TEOSINTE BRANCHED1. Buds will grow out in optimal conditions; however, when conditions are sub-optimal, SL levels increase to restrict branching. This can be a problem in agricultural applications, as reductions in branching can have deleterious effects on crop yield. Variations in promoter elements of key SL-related genes, such as IDEAL PLANT ARCHITECTURE1, have been identified to promote a phenotype with enhanced yield performance. In this review we highlight how this knowledge can be applied using new technologies to develop new genetic variants for improving crop shoot architecture and yield.
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16
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Murchie EH, Reynolds M, Slafer GA, Foulkes MJ, Acevedo-Siaca L, McAusland L, Sharwood R, Griffiths S, Flavell RB, Gwyn J, Sawkins M, Carmo-Silva E. A 'wiring diagram' for source strength traits impacting wheat yield potential. JOURNAL OF EXPERIMENTAL BOTANY 2023; 74:72-90. [PMID: 36264277 PMCID: PMC9786870 DOI: 10.1093/jxb/erac415] [Citation(s) in RCA: 6] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/14/2022] [Accepted: 10/18/2022] [Indexed: 05/06/2023]
Abstract
Source traits are currently of great interest for the enhancement of yield potential; for example, much effort is being expended to find ways of modifying photosynthesis. However, photosynthesis is but one component of crop regulation, so sink activities and the coordination of diverse processes throughout the crop must be considered in an integrated, systems approach. A set of 'wiring diagrams' has been devised as a visual tool to integrate the interactions of component processes at different stages of wheat development. They enable the roles of chloroplast, leaf, and whole-canopy processes to be seen in the context of sink development and crop growth as a whole. In this review, we dissect source traits both anatomically (foliar and non-foliar) and temporally (pre- and post-anthesis), and consider the evidence for their regulation at local and whole-plant/crop levels. We consider how the formation of a canopy creates challenges (self-occlusion) and opportunities (dynamic photosynthesis) for components of photosynthesis. Lastly, we discuss the regulation of source activity by feedback regulation. The review is written in the framework of the wiring diagrams which, as integrated descriptors of traits underpinning grain yield, are designed to provide a potential workspace for breeders and other crop scientists that, along with high-throughput and precision phenotyping data, genetics, and bioinformatics, will help build future dynamic models of trait and gene interactions to achieve yield gains in wheat and other field crops.
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Affiliation(s)
| | - Matthew Reynolds
- International Maize and Wheat Improvement Center (CIMMYT), Km. 45, Carretera Mexico-Veracruz, El Batan, Texcoco, Mexico
| | - Gustavo A Slafer
- Department of Crop and Forest Sciences, University of Lleida–AGROTECNIO-CERCA Center, Av. R. Roure 191, 25198 Lleida, Spain
- ICREA (Catalonian Institution for Research and Advanced Studies), Barcelona, Spain
| | - M John Foulkes
- Division of Plant and Crop Science, School of Biosciences, University of Nottingham, Sutton Bonington LE12 5RD, UK
| | - Liana Acevedo-Siaca
- International Maize and Wheat Improvement Center (CIMMYT), Km. 45, Carretera Mexico-Veracruz, El Batan, Texcoco, Mexico
| | - Lorna McAusland
- Division of Plant and Crop Science, School of Biosciences, University of Nottingham, Sutton Bonington LE12 5RD, UK
| | - Robert Sharwood
- Hawkesbury Institute for the Environment, Western Sydney University, Richmond NSW 2753, Australia
| | - Simon Griffiths
- John Innes Centre, Norwich Research Park, Colney Ln, Norwich NR4 7UH, UK
| | - Richard B Flavell
- International Wheat Yield Partnership, 1500 Research Parkway, College Station, TX 77843, USA
| | - Jeff Gwyn
- International Wheat Yield Partnership, 1500 Research Parkway, College Station, TX 77843, USA
| | - Mark Sawkins
- International Wheat Yield Partnership, 1500 Research Parkway, College Station, TX 77843, USA
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17
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Zhang H, Zhao D, Tang Z, Zhang Y, Zhang K, Dong J, Wang F. Exogenous brassinosteroids promotes root growth, enhances stress tolerance, and increases yield in maize. PLANT SIGNALING & BEHAVIOR 2022; 17:2095139. [PMID: 35775499 PMCID: PMC9255028 DOI: 10.1080/15592324.2022.2095139] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/11/2022] [Revised: 06/22/2022] [Accepted: 06/23/2022] [Indexed: 05/21/2023]
Abstract
Brassinosteroids (BRs) regulate of maize (Zea mays L.) growth, but the underlying molecular mechanism remains unclear. In this study, we used a multi-disciplinary approach to determine how BRs regulate maize morphology and physiology during development. Treatment with the BRs promoted primary root the elongation and growth during germination, and the early development of lateral roots. BRs treatment during the middle growth stage increased the levels of various stress resistance factors, and enhanced resistance to lodging, likely by protecting the plant against stem rot and sheath rot. BRs had no significant effect on plant height during late growth, but it increased leaf angle and photosynthetic efficiency, as well as yield and quality traits. Our findings increase our understanding of the regulatory effects of BR on maize root growth and development and the mechanism by which BR improves disease resistance, which could further the potential for using BR to improve maize yield.
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Affiliation(s)
- Hao Zhang
- State Key Laboratory of North China Crop Improvement and Regulation, Key Laboratory of Hebei Province for Plant Physiology and Molecular Pathology, College of Life Sciences, Hebei Agricultural University, Baoding, Hebei, China
| | - Dan Zhao
- College of Life Sciences, Hengshui University, Hengshui, Hebei, China
- Ministry of Education Key Laboratory of Molecular and Cellular Biology, Hebei Collaboration Innovation Center for Cell Signaling, Hebei Key Laboratory of Molecular and Cellular Biology, College of Life Sciences, Hebei Normal University, Shijiazhuang, Hebei, China
| | - Ziyan Tang
- State Key Laboratory of North China Crop Improvement and Regulation, Key Laboratory of Hebei Province for Plant Physiology and Molecular Pathology, College of Life Sciences, Hebei Agricultural University, Baoding, Hebei, China
- College of Plant Protection, Hebei Agricultural University, Baoding, Hebei, China
| | - Ying Zhang
- State Key Laboratory of North China Crop Improvement and Regulation, Key Laboratory of Hebei Province for Plant Physiology and Molecular Pathology, College of Life Sciences, Hebei Agricultural University, Baoding, Hebei, China
- Pear Engineering and Technology Research Center of Hebei, College of Horticulture, Hebei Agricultural University, Baoding, Hebei, China
| | - Ke Zhang
- State Key Laboratory of North China Crop Improvement and Regulation, Key Laboratory of Hebei Province for Plant Physiology and Molecular Pathology, College of Life Sciences, Hebei Agricultural University, Baoding, Hebei, China
| | - Jingao Dong
- State Key Laboratory of North China Crop Improvement and Regulation, Key Laboratory of Hebei Province for Plant Physiology and Molecular Pathology, College of Life Sciences, Hebei Agricultural University, Baoding, Hebei, China
- College of Plant Protection, Hebei Agricultural University, Baoding, Hebei, China
| | - Fengru Wang
- State Key Laboratory of North China Crop Improvement and Regulation, Key Laboratory of Hebei Province for Plant Physiology and Molecular Pathology, College of Life Sciences, Hebei Agricultural University, Baoding, Hebei, China
- CONTACT Fengru Wang State Key Laboratory of North China Crop Improvement and Regulation, Key Laboratory of Hebei Province for Plant Physiology and Molecular Pathology, College of Life Sciences, Hebei Agricultural University, Baoding, Hebei071001, China
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18
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Viaud G, Chen Y, Cournède PH. Full Bayesian inference in hidden Markov models of plant growth. Ann Appl Stat 2022. [DOI: 10.1214/21-aoas1594] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
Affiliation(s)
- Gautier Viaud
- Université Paris-Saclay, CentraleSupélec, Mathématiques et Informatique pour la Complexité et les Systèmes
| | - Yuting Chen
- Energy Analysis and Environmental Impacts Division, Lawrence Berkeley National Laboratory
| | - Paul-Henry Cournède
- Université Paris-Saclay, CentraleSupélec, Mathématiques et Informatique pour la Complexité et les Systèmes
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19
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Moon T, Kim D, Kwon S, Ahn TI, Son JE. Non-Destructive Monitoring of Crop Fresh Weight and Leaf Area with a Simple Formula and a Convolutional Neural Network. SENSORS (BASEL, SWITZERLAND) 2022; 22:7728. [PMID: 36298080 PMCID: PMC9607460 DOI: 10.3390/s22207728] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/09/2022] [Revised: 10/05/2022] [Accepted: 10/09/2022] [Indexed: 06/16/2023]
Abstract
Crop fresh weight and leaf area are considered non-destructive growth factors due to their direct relation to vegetative growth and carbon assimilation. Several methods to measure these parameters have been introduced; however, measuring these parameters using the existing methods can be difficult. Therefore, a non-destructive measurement method with high versatility is essential. The objective of this study was to establish a non-destructive monitoring system for estimating the fresh weight and leaf area of trellised crops. The data were collected from a greenhouse with sweet peppers (Capsicum annuum var. annuum); the target growth factors were the crop fresh weight and leaf area. The crop fresh weight was estimated based on the total system weight and volumetric water content using a simple formula. The leaf area was estimated using top-view images of the crops and a convolutional neural network (ConvNet). The estimated crop fresh weight and leaf area exhibited average R2 values of 0.70 and 0.95, respectively. The simple calculation was able to avoid overfitting with fewer limitations compared with the previous study. ConvNet was able to analyze raw images and evaluate the leaf area without additional sensors and features. As the simple calculation and ConvNet could adequately estimate the target growth factors, the monitoring system can be used for data collection in practice owing to its versatility. Therefore, the proposed monitoring system can be widely applied for diverse data analyses.
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Affiliation(s)
- Taewon Moon
- Research Institute of Agriculture and Life Sciences, Seoul National University, Seoul 08826, Korea
- Department of Agriculture, Forestry and Bioresources, Seoul National University, Seoul 08826, Korea
| | - Dongpil Kim
- Department of Agriculture, Forestry and Bioresources, Seoul National University, Seoul 08826, Korea
| | - Sungmin Kwon
- Department of Agriculture, Forestry and Bioresources, Seoul National University, Seoul 08826, Korea
| | - Tae In Ahn
- Research Institute of Agriculture and Life Sciences, Seoul National University, Seoul 08826, Korea
- Department of Agriculture, Forestry and Bioresources, Seoul National University, Seoul 08826, Korea
| | - Jung Eek Son
- Research Institute of Agriculture and Life Sciences, Seoul National University, Seoul 08826, Korea
- Department of Agriculture, Forestry and Bioresources, Seoul National University, Seoul 08826, Korea
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20
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Ectopic Expression of the Rice Grain-Size-Affecting Gene GS5 in Maize Affects Kernel Size by Regulating Endosperm Starch Synthesis. Genes (Basel) 2022; 13:genes13091542. [PMID: 36140710 PMCID: PMC9498353 DOI: 10.3390/genes13091542] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/20/2022] [Revised: 08/23/2022] [Accepted: 08/23/2022] [Indexed: 11/17/2022] Open
Abstract
Maize is one of the most important food crops, and maize kernel is one of the important components of maize yield. Studies have shown that the rice grain-size affecting gene GS5 increases the thousand-kernel weight by positively regulating the rice grain width and grain grouting rate. In this study, based on the GS5 transgenic maize obtained through transgenic technology with specific expression in the endosperm, molecular assays were performed on the transformed plants. Southern blotting results showed that the GS5 gene was integrated into the maize genome in a low copy number, and RT-PCR analysis showed that the exogenous GS5 gene was normally and highly expressed in maize. The agronomic traits of two successive generations showed that certain lines were significantly improved in yield-related traits, and the most significant changes were observed in the OE-34 line, where the kernel width increased significantly by 8.99% and 10.96%, the 100-kernel weight increased by 14.10% and 10.82%, and the ear weight increased by 13.96% and 15.71%, respectively; however, no significant differences were observed in the plant height, ear height, kernel length, kernel row number, or kernel number. In addition, the overexpression of the GS5 gene increased the grain grouting rate and affected starch synthesis in the rice grains. The kernels’ starch content in OE-25, OE-34, and OE-57 increased by 10.30%, 7.39%, and 6.39%, respectively. Scanning electron microscopy was performed to observe changes in the starch granule size, and the starch granule diameter of the transgenic line(s) was significantly reduced. RT-PCR was performed to detect the expression levels of related genes in starch synthesis, and the expression of these genes was generally upregulated. It was speculated that the exogenous GS5 gene changed the size of the starch granules by regulating the expression of related genes in the starch synthesis pathway, thus increasing the starch content. The trans-GS5 gene was able to be stably expressed in the hybrids with the genetic backgrounds of the four materials, with significant increases in the kernel width, 100-kernel weight, and ear weight. In this study, the maize kernel size was significantly increased through the endosperm-specific expression of the rice GS5 gene, and good material for the functional analysis of the GS5 gene was created, which was of great importance in theory and application.
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21
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De Souza AP, Burgess SJ, Doran L, Hansen J, Manukyan L, Maryn N, Gotarkar D, Leonelli L, Niyogi KK, Long SP. Soybean photosynthesis and crop yield are improved by accelerating recovery from photoprotection. Science 2022; 377:851-854. [PMID: 35981033 DOI: 10.1126/science.adc9831] [Citation(s) in RCA: 80] [Impact Index Per Article: 40.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Abstract
Crop leaves in full sunlight dissipate damaging excess absorbed light energy as heat. This protective dissipation continues after the leaf transitions to shade, reducing crop photosynthesis. A bioengineered acceleration of this adjustment increased photosynthetic efficiency and biomass in tobacco in the field. But could that also translate to increased yield in a food crop? Here we bioengineered the same change into soybean. In replicated field trials, photosynthetic efficiency in fluctuating light was higher and seed yield in five independent transformation events increased by up to 33%. Despite increased seed quantity, seed protein and oil content were unaltered. This validates increasing photosynthetic efficiency as a much needed strategy toward sustainably increasing crop yield in support of future global food security.
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Affiliation(s)
- Amanda P De Souza
- Carl R Woese Institute for Genomic Biology, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Steven J Burgess
- Carl R Woese Institute for Genomic Biology, University of Illinois at Urbana-Champaign, Urbana, IL, USA.,Department of Plant Biology, Morrill Hall, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Lynn Doran
- Carl R Woese Institute for Genomic Biology, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Jeffrey Hansen
- Carl R Woese Institute for Genomic Biology, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Lusya Manukyan
- Carl R Woese Institute for Genomic Biology, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Nina Maryn
- Howard Hughes Medical Institute, Department of Plant and Microbial Biology, University of California, Berkeley, CA, USA
| | - Dhananjay Gotarkar
- Department of Plant Biology, Morrill Hall, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Lauriebeth Leonelli
- Carl R Woese Institute for Genomic Biology, University of Illinois at Urbana-Champaign, Urbana, IL, USA.,Department of Agricultural and Biological Engineering, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Krishna K Niyogi
- Howard Hughes Medical Institute, Department of Plant and Microbial Biology, University of California, Berkeley, CA, USA.,Molecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA
| | - Stephen P Long
- Carl R Woese Institute for Genomic Biology, University of Illinois at Urbana-Champaign, Urbana, IL, USA.,Lancaster Environment Centre, Lancaster University, Lancaster, UK
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22
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Kim D, An S, Kim L, Byeon YM, Lee J, Choi MJ, An YJ. Translocation and chronic effects of microplastics on pea plants (Pisum sativum) in copper-contaminated soil. JOURNAL OF HAZARDOUS MATERIALS 2022; 436:129194. [PMID: 35739724 DOI: 10.1016/j.jhazmat.2022.129194] [Citation(s) in RCA: 29] [Impact Index Per Article: 14.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/11/2022] [Revised: 04/24/2022] [Accepted: 05/17/2022] [Indexed: 05/23/2023]
Abstract
Microplastics (MPs) released into soil environments, along with the existing pollutants in soil, may have adverse effects on plants. However, the chronic effects of MPs in soils contaminated with heavy metals on crop plants remain unidentified. This study aimed to investigate the chronic effects of MPs (polystyrene, 20 nm) on the reproductive and nutritional status of pea crop plant (Pisum sativum) grown in Cu- (40 mg/kg) and MP-contaminated soils (40, 20 mg/kg). The crop yield reduced in all groups, with an evident decrease in the complex exposure group (comprising MPs and Cu). Moreover, significant changes in plants were identified regarding the weight, color, amino acids, and protein content of peas. Nutrient content in beans increased by MP exposure in single and complex exposure groups. Cu accumulation did not differ in the presence and absence of MPs. Additionally, MPs that infiltrated into incomplete casparian strips during root formation translocated into aerial parts via the apoplast pathway along the cell walls of the vascular bundle. Therefore, long-term exposure to MPs in soil can significantly affect plants while collective application of Cu and MPs imposed severe damage. The changes in the crop quality and nutrient contents may in turn affect human health through the food chain.
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Affiliation(s)
- Dokyung Kim
- Department of Environmental Health Science, Konkuk University, 120 Neungdong-ro, Gwangjin-gu, Seoul 05029, Korea
| | - Sanghee An
- Department of Environmental Health Science, Konkuk University, 120 Neungdong-ro, Gwangjin-gu, Seoul 05029, Korea
| | - Lia Kim
- Department of Environmental Health Science, Konkuk University, 120 Neungdong-ro, Gwangjin-gu, Seoul 05029, Korea
| | - Yeong Mi Byeon
- Department of Food Science and Biotechnology of Animal Resources, Konkuk University, 120 Neungdong-ro, Gwangjin-gu, Seoul 05029, Korea
| | - Jiseon Lee
- Department of Food Science and Biotechnology of Animal Resources, Konkuk University, 120 Neungdong-ro, Gwangjin-gu, Seoul 05029, Korea
| | - Mi-Jung Choi
- Department of Food Science and Biotechnology of Animal Resources, Konkuk University, 120 Neungdong-ro, Gwangjin-gu, Seoul 05029, Korea
| | - Youn-Joo An
- Department of Environmental Health Science, Konkuk University, 120 Neungdong-ro, Gwangjin-gu, Seoul 05029, Korea.
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23
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Marín-Sanz M, Barro F. RNAi silencing of wheat gliadins alters the network of transcription factors that regulate the synthesis of seed storage proteins toward maintaining grain protein levels. FRONTIERS IN PLANT SCIENCE 2022; 13:935851. [PMID: 36003813 PMCID: PMC9395171 DOI: 10.3389/fpls.2022.935851] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/04/2022] [Accepted: 07/19/2022] [Indexed: 06/15/2023]
Abstract
Gluten proteins are responsible for the unique viscoelastic properties of wheat dough, but they also trigger the immune response in celiac disease patients. RNA interference (RNAi) wheat lines with strongly silenced gliadins were obtained to reduce the immunogenic response of wheat. The E82 line presents the highest reduction of gluten, but other grain proteins increased, maintaining a total nitrogen content comparable to that of the wild type. To better understand the regulatory mechanisms in response to gliadin silencing, we carried out a transcriptomic analysis of grain and leaf tissues of the E82 line during grain filling. A network of candidate transcription factors (TFs) that regulates the synthesis of the seed storage proteins (SSPs), α-amylase/trypsin inhibitors, lipid transfer proteins, serpins, and starch in the grain was obtained. Moreover, there were a high number of differentially expressed genes in the leaf of E82, where processes such as nutrient availability and transport were enriched. The source-sink communication between leaf and grain showed that many down-regulated genes were related to protease activity, amino acid and sugar metabolism, and their transport. In the leaf, specific proline transporters and lysine-histidine transporters were down- and up-regulated, respectively. Overall, the silencing of gliadins in the RNAi line is compensated mainly with lysine-rich globulins, which are not related to the proposed candidate network of TFs, suggesting that these proteins are regulated independently of the other SSPs. Results reported here can explain the protein compensation mechanisms and contribute to decipher the complex TF network operating during grain filling.
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24
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Nam H, Gupta A, Nam H, Lee S, Cho HS, Park C, Park S, Park SJ, Hwang I. JULGI-mediated increment in phloem transport capacity relates to fruit yield in tomato. PLANT BIOTECHNOLOGY JOURNAL 2022; 20:1533-1545. [PMID: 35478430 PMCID: PMC9342617 DOI: 10.1111/pbi.13831] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/28/2021] [Revised: 04/19/2022] [Accepted: 04/21/2022] [Indexed: 06/14/2023]
Abstract
The continuous growth of the global population and the increase in the amount of arid land has severely constrained agricultural crop production. To solve this problem, many researchers have attempted to increase productivity through the efficient distribution of energy; however, the direct relationship between the plant vasculature, specifically phloem development, and crop yield is not well established. Here, we demonstrate that an optimum increase in phloem-transportation capacity by reducing SIJUL expression leads to improved sink strength in tomato (Solanum lycopersicum L.). SIJUL, a negative regulator of phloem development, suppresses the translation of a positive regulator of phloem development, SlSMXL5. The suppression of SlJUL increases the number of phloem cells and sucrose transport, but only an optimal reduction of SlJUL function greatly enhances sink strength in tomato, improving fruit setting, and yield contents by 37% and 60%, respectively. We show that the increment in phloem cell number confers spare transport capacity. Our results suggest that the control of phloem-transport capacity within the threshold could enhance the commitment of photosynthates to instigate yield improvement.
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Affiliation(s)
- Hoyoung Nam
- Department of Life SciencesPOSTECH Biotech CenterPohang University of Science and TechnologyPohangKorea
| | - Aarti Gupta
- Department of Life SciencesPOSTECH Biotech CenterPohang University of Science and TechnologyPohangKorea
| | - Heejae Nam
- Department of Life SciencesPOSTECH Biotech CenterPohang University of Science and TechnologyPohangKorea
| | - Seungchul Lee
- Department of Life SciencesPOSTECH Biotech CenterPohang University of Science and TechnologyPohangKorea
| | - Hyun Seob Cho
- Department of Life SciencesPOSTECH Biotech CenterPohang University of Science and TechnologyPohangKorea
| | - Chanyoung Park
- Department of Life SciencesPOSTECH Biotech CenterPohang University of Science and TechnologyPohangKorea
| | - Soyoung Park
- Department of Life SciencesPOSTECH Biotech CenterPohang University of Science and TechnologyPohangKorea
| | - Soon Ju Park
- Division of Biological Sciences and Research Institute for Basic ScienceWonkwang UniversityIksanKorea
| | - Ildoo Hwang
- Department of Life SciencesPOSTECH Biotech CenterPohang University of Science and TechnologyPohangKorea
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25
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Song M, Zhang X, Yang J, Gao C, Wei Y, Chen S, Liesche J. Arabidopsis plants engineered for high root sugar secretion enhance the diversity of soil microorganisms. Biotechnol J 2022; 17:e2100638. [PMID: 35894173 DOI: 10.1002/biot.202100638] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/19/2021] [Revised: 07/21/2022] [Accepted: 07/23/2022] [Indexed: 11/06/2022]
Abstract
Plants secrete sugars from their roots into the soil, presumably to support beneficial plant-microbe interactions. Accordingly, manipulation of sugar secretion might be a viable strategy to enhance plant health and productivity. To evaluate the effect of increased root sugar secretion on plant performance and the soil microbiome, we overexpressed glucose and sucrose-specific membrane transporters in root epidermal cells of the model plant Arabidopsis thaliana. These plants showed strongly increased rates of sugar secretion in a hydroponic culture system. When grown on soil, the transporter-overexpressor plants displayed a higher photosynthesis rate, but reduced shoot growth compared to the wild-type control. Amplicon sequencing and qPCR analysis of rhizosphere soil samples indicated a limited effect on the total abundance of bacteria and fungi, but a strong effect on community structure in soil samples associated with the overexpressors. Notable changes included the increased abundance of bacteria belonging to the genus Rhodanobacter and the fungi belonging to the genus Cutaneotrichosporon, while Candida species abundance was reduced. The potential influences of the altered soil microbiome on plant health and productivity are discussed. The results indicate that the engineering of sugar secretion can be a viable pathway to enhancing the carbon sequestration rate and optimizing the soil microbiome. This article is protected by copyright. All rights reserved.
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Affiliation(s)
- Min Song
- College of Life Sciences, Northwest A&F University, Yangling, 712100, China.,Biomass Energy Center for Arid and Semiarid Lands, Northwest A&F University, Yangling, 712100, China.,State Key Laboratory of Stress Biology for Arid Areas, Northwest A&F University, Yangling, 712100, China
| | - Xingjian Zhang
- College of Life Sciences, Northwest A&F University, Yangling, 712100, China.,Biomass Energy Center for Arid and Semiarid Lands, Northwest A&F University, Yangling, 712100, China.,State Key Laboratory of Stress Biology for Arid Areas, Northwest A&F University, Yangling, 712100, China
| | - Jintao Yang
- College of Life Sciences, Northwest A&F University, Yangling, 712100, China.,Biomass Energy Center for Arid and Semiarid Lands, Northwest A&F University, Yangling, 712100, China.,State Key Laboratory of Stress Biology for Arid Areas, Northwest A&F University, Yangling, 712100, China
| | - Chen Gao
- Department of Plant and Environmental Sciences, University of Copenhagen, Frederiksberg, 1871, Denmark
| | - Yahong Wei
- College of Life Sciences, Northwest A&F University, Yangling, 712100, China.,Biomass Energy Center for Arid and Semiarid Lands, Northwest A&F University, Yangling, 712100, China
| | - Shaolin Chen
- College of Life Sciences, Northwest A&F University, Yangling, 712100, China.,Biomass Energy Center for Arid and Semiarid Lands, Northwest A&F University, Yangling, 712100, China
| | - Johannes Liesche
- College of Life Sciences, Northwest A&F University, Yangling, 712100, China.,Biomass Energy Center for Arid and Semiarid Lands, Northwest A&F University, Yangling, 712100, China.,State Key Laboratory of Stress Biology for Arid Areas, Northwest A&F University, Yangling, 712100, China
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26
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Tu D, Jiang Y, Salah A, Cai M, Peng W, Zhang L, Li C, Cao C. Response of Source-Sink Characteristics and Rice Quality to High Natural Field Temperature During Reproductive Stage in Irrigated Rice System. FRONTIERS IN PLANT SCIENCE 2022; 13:911181. [PMID: 35865292 PMCID: PMC9294507 DOI: 10.3389/fpls.2022.911181] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 04/02/2022] [Accepted: 06/20/2022] [Indexed: 06/15/2023]
Abstract
Global warming greatly affects the development of rice at different growth stages, thereby deteriorating rice quality. However, the effect of high natural field temperature during reproductive stages on rice quality is unclear. Thus, grain filling dynamics, source-sink characteristics and quality-related traits were compared between two contrasting natural field temperature conditions namely normal (low temperature) (LRT) and hot (high temperature) growth season (HRT) during reproductive stage. Compared with LRT, HRT significantly increased chalky grain rate (about 1.6-3.1%), chalkiness level (about 4.7-22.4%), protein content (about 0.93-1.07%), pasting temperature, setback, and consistence, and decreased total starch content (about 4.6-6.2%). Moreover, HRT significantly reduced the leaf area index (LAI, about 0.54-1.11 m2 m-2), specific leaf weight (SLW, about 1.27-1.44 mg cm-2) and source-sink ratio (leaf-sink ratio and/or stem-sink ratio), shortened the active grain filling period by 3.1-3.2 days, and reduced the rations of dry matter translocation to grain (RDMs). In conclusion, we suggested that significant reduction in assimilate translocation after flowering, resulting in the reduced active grain-filling duration and the poor rice quality (high chalkiness and the poor eating and cooking quality), modulated by source-sink characteristics in response to high natural field temperature during reproductive stage. These results enriched the study of high temperature-stressed rice and served as an important reference for selecting high-quality, heat-tolerant varieties and protecting rice quality under high-temperature conditions.
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Affiliation(s)
- Debao Tu
- National Key Laboratory of Crop Genetic Improvement, MOA Key Laboratory of Crop Physiology, Ecology and Cultivation (The Middle Reaches of Yangtze River), Huazhong Agricultural University, Wuhan, China
- Rice Research Institute, Anhui Academy of Agricultural Sciences, Hefei, China
| | - Yang Jiang
- National Key Laboratory of Crop Genetic Improvement, MOA Key Laboratory of Crop Physiology, Ecology and Cultivation (The Middle Reaches of Yangtze River), Huazhong Agricultural University, Wuhan, China
| | - Akram Salah
- National Key Laboratory of Crop Genetic Improvement, MOA Key Laboratory of Crop Physiology, Ecology and Cultivation (The Middle Reaches of Yangtze River), Huazhong Agricultural University, Wuhan, China
| | - Mingli Cai
- National Key Laboratory of Crop Genetic Improvement, MOA Key Laboratory of Crop Physiology, Ecology and Cultivation (The Middle Reaches of Yangtze River), Huazhong Agricultural University, Wuhan, China
| | - Wei Peng
- National Key Laboratory of Crop Genetic Improvement, MOA Key Laboratory of Crop Physiology, Ecology and Cultivation (The Middle Reaches of Yangtze River), Huazhong Agricultural University, Wuhan, China
| | - Lijuan Zhang
- National Key Laboratory of Crop Genetic Improvement, MOA Key Laboratory of Crop Physiology, Ecology and Cultivation (The Middle Reaches of Yangtze River), Huazhong Agricultural University, Wuhan, China
| | - Chengfang Li
- National Key Laboratory of Crop Genetic Improvement, MOA Key Laboratory of Crop Physiology, Ecology and Cultivation (The Middle Reaches of Yangtze River), Huazhong Agricultural University, Wuhan, China
| | - Cougui Cao
- National Key Laboratory of Crop Genetic Improvement, MOA Key Laboratory of Crop Physiology, Ecology and Cultivation (The Middle Reaches of Yangtze River), Huazhong Agricultural University, Wuhan, China
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27
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Effects of the Source–Sink Relationship on Walnut Nut Quality at the Scale of the Fruit–Bearing Branch. FORESTS 2022. [DOI: 10.3390/f13071034] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Fruit quality is known to be regulated by the balance between leaf number/area and fruit number, but less is known about the effects of fruit–bearing branch agronomic traits, particularly for walnuts (Juglans regia L.). We assessed nut quality, physiological and biochemical indexes of leaves, and microstructure of leaves and fruit stalks at various leaf–to–fruit ratios to gain insight into the relationships between branch agronomic traits and nut quality, to identify those traits that made a better contribution to nut quality and to find out the range of the leaf–to–fruit ratio and the object of fruit to be removed for thinning. We found that the top fruit on the fruit stalk had a higher longitudinal diameter and kernel weight than the bottom at the low leaf–to–fruit level, and branches with more pinnate compound leaves had a better capacity for carbohydrate assimilation and transportation to produce better quality fruits. Specifically, with the increasing leaf number, the branch diameter, total leaf area, net photosynthetic rate, chlorophyll content, fruit weight, fruit diameters, and kernel protein content also increased. Moreover, at the microscopic level, the fruit stalk vascular bundle, leaf thickness, palisade mesophyll thickness, and ratios of palisade mesophyll to spongy mesophyll thickness in the leaf also showed the same trend. Therefore, when the ratio of leaf area to the fruit number was less than 181.5 square centimeters per fruit on the branches, reducing the fruit number could improve the size and the crude fat content of fruits. While the ratio was more than 247.8 square centimeters per fruit, the fruit number had no significant effect on fruit quality, but increasing leaf area and branch diameter could improve the fruit size and yield.
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28
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Merchant A, Smith MR, Windt CW. In situ pod growth rate reveals contrasting diurnal sensitivity to water deficit in Phaseolus vulgaris. JOURNAL OF EXPERIMENTAL BOTANY 2022; 73:3774-3786. [PMID: 35323925 PMCID: PMC9162186 DOI: 10.1093/jxb/erac097] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/14/2021] [Accepted: 03/22/2022] [Indexed: 06/14/2023]
Abstract
The development of reproductive tissues determines plant fecundity and yield. Loading of resources into the developing reproductive tissue is thought to be under the co-limiting effects of source and sink strength. The dynamics of this co-limitation are unknown, largely due to an inability to measure the flux of resources into a developing sink. Here we use nuclear magnetic resonance (NMR) sensors to measure sink strength by quantifying rates of pod dry matter accumulation (pod loading) in Phaseolus vulgaris at 13-min intervals across the diel period. Rates of pod loading showed contrasting variation across light and dark periods during the onset of water deficit. In addition, rates of pod loading appeared decoupled from net photosynthetic rates when adjusted to the plant scale. Combined, these observations illustrate that the rate of pod development varies under water limitation and that continuous, non-invasive methodologies to measure sink strength provide insight into the governing processes that determine the development of reproductive tissues.
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Affiliation(s)
| | - Millicent R Smith
- School of Life and Environmental Sciences, Faculty of Science, The University of Sydney, Sydney, NSW 2006, Australia
- IBG-2: Plant Sciences, Forschungszentrum Jülich, Jülich, Germany
| | - Carel W Windt
- IBG-2: Plant Sciences, Forschungszentrum Jülich, Jülich, Germany
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29
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On-Farm Supplemental Irrigation of ‘Roja Lisa’ Cactus Pear: Pre- and Postharvest Effects. HORTICULTURAE 2022. [DOI: 10.3390/horticulturae8060483] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/10/2022]
Abstract
Opuntia species grow in arid and semiarid lands, where water for irrigation is scarce. However, supplemental irrigation can be a feasible strategy for commercial cactus pear orchards. From 2018 to 2020, a commercial cactus pear orchard was managed to validate the effect of supplemental irrigation on fruit yield, crop water use efficiency, fruit quality, and storability of ‘Roja Lisa’ cactus pear grown in the semiarid region of Mexico. The irrigation treatments were no irrigation and supplemental irrigation, with four replications. Crop water use was less and, therefore, water productivity greater in non-irrigated plants than in plants with supplemental irrigation. Mean fruit yield, mean fruit mass, and proportion of commercial fruit increased with supplemental irrigation. These differences were more pronounced in growing seasons with less rainfall. Fruit quality at harvest or after room temperature or cold storage was examined. Fruit mass loss rate was reduced in fruit receiving supplemental irrigation in both storage conditions. In addition, supplemental irrigation was consistent with water savings and food security programs in marginal areas: this irrigation strategy improved both pre- and postharvest some quality components of cactus pear fruit. Therefore, this irrigation strategy is suggested for cactus pear growers, depending on the availability of water for irrigation.
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30
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Garcia-Parra MÁ, Roa-Acosta DF, Bravo-Gomez JE, Hernández-Criado JC, Villada-Castillo HS. Effects of Altitudinal Gradient on Physicochemical and Rheological Potential of Quinoa Cultivars. FRONTIERS IN SUSTAINABLE FOOD SYSTEMS 2022. [DOI: 10.3389/fsufs.2022.862238] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
The protein, carbohydrate, and fat characteristics of quinoa grains reflect in their techno-functional potential. This aspect has been little studied in quinoa, while some physicochemical and rheological characteristics have been generalized for all cultivars under all primary production conditions. The aim of this research is to determine the agro-industrial potential of different quinoa cultivars evaluated under different environments through physicochemical and rheological responses. This study has a factorial design with a first level corresponding to cultivars and a second level to production zones. The results showed that the cultivars present high compositional variability. It was also found that the altitudinal gradient changes protein and starch composition, protein secondary structure, and starch structural conformation. In addition, significant variations were found in viscosity, breakdown, and dispersion setback for all treatments. However, there were no differences between treatments before heating/cooling and after heat treatment.
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31
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Morin A, Maurousset L, Vriet C, Lemoine R, Doidy J, Pourtau N. Carbon fluxes and environmental interactions during legume development, with a specific focus on Pisum sativum. PHYSIOLOGIA PLANTARUM 2022; 174:e13729. [PMID: 35662039 PMCID: PMC9328368 DOI: 10.1111/ppl.13729] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/17/2021] [Revised: 05/25/2022] [Accepted: 06/01/2022] [Indexed: 06/15/2023]
Abstract
Grain legumes are major food crops cultivated worldwide for their seeds with high nutritional content. To answer the growing concern about food safety and protein autonomy, legume cultivation must increase in the coming years. In parallel, current agricultural practices are facing environmental challenges, including global temperature increase and more frequent and severe episodes of drought stress. Crop yield directly relies on carbon allocation and is particularly affected by these global changes. We review the current knowledge on source-sink relationships and carbon resource allocation at all developmental stages, from germination to vegetative growth and seed production in grain legumes, focusing on pea (Pisum sativum). We also discuss how these source-sink relationships and carbon fluxes are influenced by biotic and abiotic factors. Major agronomic traits, including seed yield and quality, are particularly impacted by drought, temperatures, salinity, waterlogging, or pathogens and can be improved through the promotion of beneficial soil microorganisms or through optimized plant carbon resource allocation. Altogether, our review highlights the need for a better understanding of the cellular and molecular mechanisms regulating carbon fluxes from source leaves to sink organs, roots, and seeds. These advancements will further improve our understanding of yield stability and stress tolerance and contribute to the selection of climate-resilient crops.
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Affiliation(s)
- Amélie Morin
- Université de Poitiers, UMR CNRS 7267, EBI "Ecologie et Biologie des Interactions"PoitiersFrance
| | - Laurence Maurousset
- Université de Poitiers, UMR CNRS 7267, EBI "Ecologie et Biologie des Interactions"PoitiersFrance
| | - Cécile Vriet
- Université de Poitiers, UMR CNRS 7267, EBI "Ecologie et Biologie des Interactions"PoitiersFrance
| | - Rémi Lemoine
- Université de Poitiers, UMR CNRS 7267, EBI "Ecologie et Biologie des Interactions"PoitiersFrance
| | - Joan Doidy
- Université de Poitiers, UMR CNRS 7267, EBI "Ecologie et Biologie des Interactions"PoitiersFrance
| | - Nathalie Pourtau
- Université de Poitiers, UMR CNRS 7267, EBI "Ecologie et Biologie des Interactions"PoitiersFrance
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32
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Smith MR, Dinglasan E, Veneklaas E, Polania J, Rao IM, Beebe SE, Merchant A. Effect of Drought and Low P on Yield and Nutritional Content in Common Bean. FRONTIERS IN PLANT SCIENCE 2022; 13:814325. [PMID: 35422826 PMCID: PMC9002355 DOI: 10.3389/fpls.2022.814325] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/13/2021] [Accepted: 02/16/2022] [Indexed: 06/14/2023]
Abstract
Common bean (Phaseolus vulgaris L.) production in the tropics typically occurs in rainfed systems on marginal lands where yields are low, primarily as a consequence of drought and low phosphorus (P) availability in soil. This study aimed to investigate the physiological and chemical responses of 12 bush bean genotypes for adaptation to individual and combined stress factors of drought and low P availability. Water stress and P deficiency, both individually and combined, decreased seed weight and aboveground biomass by ∼80%. Water deficit and P deficiency decreased photosynthesis and stomatal conductance during plant development. Maximum rates of carboxylation, electron transport, and triose phosphate utilization were superior for two common bean genotypes (SEF60 and NCB226) that are better adapted to combined stress conditions of water deficit and low P compared to the commercial check (DOR390). In response to water deficit treatment, carbon isotope fractionation in the leaf tissue decreased at all developmental stages. Within the soluble leaf fraction, combined water deficit and low P, led to significant changes in the concentration of key nutrients and amino acids, whereas no impact was detected in the seed. Our results suggest that common bean genotypes have a degree of resilience in yield development, expressed in traits such as pod harvest index, and conservation of nutritional content in the seed. Further exploration of the chemical and physiological traits identified here will enhance the resilience of common bean production systems in the tropics.
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Affiliation(s)
- Millicent R. Smith
- School of Life and Environmental Sciences, Faculty of Science, The University of Sydney, Sydney, NSW, Australia
| | - Eric Dinglasan
- Queensland Alliance for Agriculture and Food Innovation, The University of Queensland, Saint Lucia, QLD, Australia
| | - Erik Veneklaas
- School of Biological Sciences and Institute of Agriculture, The University of Western Australia, Crawley, WA, Australia
| | - Jose Polania
- Centro Internacional de Agricultura Tropical (CIAT), Cali, Colombia
| | | | - Stephen E. Beebe
- Centro Internacional de Agricultura Tropical (CIAT), Cali, Colombia
| | - Andrew Merchant
- School of Life and Environmental Sciences, Faculty of Science, The University of Sydney, Sydney, NSW, Australia
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33
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Smith MR, Reis Hodecker BE, Fuentes D, Merchant A. Investigating Nutrient Supply Effects on Plant Growth and Seed Nutrient Content in Common Bean. PLANTS (BASEL, SWITZERLAND) 2022; 11:737. [PMID: 35336619 PMCID: PMC8951238 DOI: 10.3390/plants11060737] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/29/2022] [Revised: 03/08/2022] [Accepted: 03/08/2022] [Indexed: 06/14/2023]
Abstract
Low soil fertility commonly limits growth and yield production of common bean (Phaseolus vulgaris L.) in tropical regions. Impacts of nutrient limitations on production volume are well studied and are a major factor in reducing crop yields. This study characterised the impact of reduced nutrient supply on carbon assimilation and nutrient content of leaf, phloem sap and reproductive tissues of common bean grown in a controlled environment in order to detect chemical markers for changes in nutritional content. Leaf gas exchange measurements were undertaken over plant development to characterise changes to carbon assimilation under reduced nutrient supply. Samples of leaf, phloem sap and pod tissue of common bean were analysed for carbon isotope discrimination, mineral nutrient content, and amino acid concentration. Despite declines in nutrient availability leading to decreased carbon assimilation and reductions in yield, amino acid concentration was maintained in the pod tissue. Common bean can maintain the nutritional content of individual pods under varying nutrient availabilities demonstrating the resilience of processes determining the viability of reproductive tissues.
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34
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Dominguez PG, Niittylä T. Mobile forms of carbon in trees: metabolism and transport. TREE PHYSIOLOGY 2022; 42:458-487. [PMID: 34542151 PMCID: PMC8919412 DOI: 10.1093/treephys/tpab123] [Citation(s) in RCA: 11] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/18/2021] [Revised: 07/16/2021] [Accepted: 09/12/2021] [Indexed: 05/26/2023]
Abstract
Plants constitute 80% of the biomass on earth, and almost two-thirds of this biomass is found in wood. Wood formation is a carbon (C)-demanding process and relies on C transport from photosynthetic tissues. Thus, understanding the transport process is of major interest for understanding terrestrial biomass formation. Here, we review the molecules and mechanisms used to transport and allocate C in trees. Sucrose is the major form in which C is transported in plants, and it is found in the phloem sap of all tree species investigated so far. However, in several tree species, sucrose is accompanied by other molecules, notably polyols and the raffinose family of oligosaccharides. We describe the molecules that constitute each of these transport groups, and their distribution across different tree species. Furthermore, we detail the metabolic reactions for their synthesis, the mechanisms by which trees load and unload these compounds in and out of the vascular system, and how they are radially transported in the trunk and finally catabolized during wood formation. We also address a particular C recirculation process between phloem and xylem that occurs in trees during the annual cycle of growth and dormancy. A search of possible evolutionary drivers behind the diversity of C-carrying molecules in trees reveals no consistent differences in C transport mechanisms between angiosperm and gymnosperm trees. Furthermore, the distribution of C forms across species suggests that climate-related environmental factors will not explain the diversity of C transport forms. However, the consideration of C-transport mechanisms in relation to tree-rhizosphere coevolution deserves further attention. To conclude the review, we identify possible future lines of research in this field.
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Affiliation(s)
- Pia Guadalupe Dominguez
- Instituto de Agrobiotecnología y Biología Molecular (IABIMO), Instituto Nacional de Tecnología Agropecuaria (INTA), Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Hurlingham, Buenos Aires B1686IGC, Argentina
| | - Totte Niittylä
- Department of Forest Genetics and Plant Physiology, Umeå Plant Science Centre, Swedish University of Agricultural Sciences, Umeå 90183, Sweden
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Wu X, Liu Y, Luo H, Shang L, Leng C, Liu Z, Li Z, Lu X, Cai H, Hao H, Jing HC. Genomic footprints of sorghum domestication and breeding selection for multiple end uses. MOLECULAR PLANT 2022; 15:537-551. [PMID: 34999019 DOI: 10.1016/j.molp.2022.01.002] [Citation(s) in RCA: 14] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/07/2021] [Revised: 12/01/2021] [Accepted: 01/04/2022] [Indexed: 06/14/2023]
Abstract
Domestication and diversification have had profound effects on crop genomes. Originating in Africa and subsequently spreading to different continents, sorghum (Sorghum bicolor) has experienced multiple onsets of domestication and intensive breeding selection for various end uses. However, how these processes have shaped sorghum genomes is not fully understood. In the present study, population genomics analyses were performed on a worldwide collection of 445 sorghum accessions, covering wild sorghum and four end-use subpopulations with diverse agronomic traits. Frequent genetic exchanges were found among various subpopulations, and strong selective sweeps affected 14.68% (∼107.5 Mb) of the sorghum genome, including 3649, 4287, and 3888 genes during sorghum domestication, improvement of grain sorghum, and improvement of sweet sorghum, respectively. Eight different models of haplotype changes in domestication genes from wild sorghum to landraces and improved sorghum were observed, and Sh1- and SbTB1-type genes were representative of two prominent models, one of soft selection or multiple origins and one of hard selection or an early single domestication event. We also demonstrated that the Dry gene, which regulates stem juiciness, was unconsciously selected during the improvement of grain sorghum. Taken together, these findings provide new genomic insights into sorghum domestication and breeding selection, and will facilitate further dissection of the domestication and molecular breeding of sorghum.
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Affiliation(s)
- Xiaoyuan Wu
- Key Laboratory of Plant Resources, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China
| | - Yuanming Liu
- Key Laboratory of Plant Resources, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Hong Luo
- Key Laboratory of Plant Resources, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China
| | - Li Shang
- Key Laboratory of Plant Resources, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China
| | - Chuanyuan Leng
- Key Laboratory of Plant Resources, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China
| | - Zhiquan Liu
- Key Laboratory of Plant Resources, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China
| | - Zhigang Li
- Key Laboratory of Plant Resources, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China
| | - Xiaochun Lu
- Institute of Sorghum Research, Liaoning Academy of Agricultural Sciences, Shenyang 110161, China
| | - Hongwei Cai
- College of Grassland Science and Technology, China Agricultural University, Beijing 100193, China
| | - Huaiqing Hao
- Key Laboratory of Plant Resources, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China.
| | - Hai-Chun Jing
- Key Laboratory of Plant Resources, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China; Engineering Laboratory for Grass-Based Livestock Husbandry, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China; University of Chinese Academy of Sciences, Beijing 100049, China.
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Grzebisz W, Frąckowiak K, Spiżewski T, Przygocka-Cyna K. Does Elemental Sulfur Act as an Effective Measure to Control the Seasonal Growth Dynamics of Potato Tubers (Solanum tuberosum L.)? PLANTS 2022; 11:plants11030248. [PMID: 35161228 PMCID: PMC8839987 DOI: 10.3390/plants11030248] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/28/2021] [Revised: 01/09/2022] [Accepted: 01/13/2022] [Indexed: 11/24/2022]
Abstract
The in-season dynamics of potato tuber biomass (TTB) growth requires effective nitrogen (N) control. This hypothesis was tested in 2006 and 2007. The two-factorial experiment with two rates of N (60, 120 kg ha−1) and sulfur (S; 0, 50 kg ha−1) was carried out in the split-plot design. The third factor was the sampling of plants at 10-day intervals. The collected plant material was divided into leaves, stems, stolons + roots, and tubers. The seasonal trend of TTB was linear, while the biomass of leaves, stems, and stolons + roots was consistent with polynomial regression models. TTB was controlled by (i) the date of potato growth after emergence, when the TTB exceeded the leaf biomass (DAEcrit); (ii) the stem growth rate; and iii) the share of stems in the total potato biomass. TTB growth was reduced when DAEcrit preceded the DAEop for leaf biomass, determining its maximum. This phenomenon appeared in 2007 on plots fertilized only with N. The absolute growth rate of the stem biomass, exceeding ¼ of that of the tuber biomass in the descending phase, resulted in an increased and prolonged share of stems in the total potato biomass, which ultimately led to a decrease in tuber yield. The use of sulfur to balance the N, applied effectively, controlled the growth rate of potato organs competing with tubers.
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Affiliation(s)
- Witold Grzebisz
- Department of Agricultural Chemistry and Environmental Biogeochemistry, Poznan University of Life Sciences, Wojska Polskiego 28, 60-637 Poznan, Poland;
- Correspondence:
| | | | - Tomasz Spiżewski
- Department of Vegetables Production, Poznan University of Life Sciences, Wojska Polskiego 28, 60-637 Poznań, Poland;
| | - Katarzyna Przygocka-Cyna
- Department of Agricultural Chemistry and Environmental Biogeochemistry, Poznan University of Life Sciences, Wojska Polskiego 28, 60-637 Poznan, Poland;
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Analysis of Global Gene Expression in Maize (Zea mays) Vegetative and Reproductive Tissues That Differ in Accumulation of Starch and Sucrose. PLANTS 2022; 11:plants11030238. [PMID: 35161219 PMCID: PMC8838981 DOI: 10.3390/plants11030238] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/14/2021] [Revised: 10/21/2021] [Accepted: 10/22/2021] [Indexed: 11/17/2022]
Abstract
Carbon allocation between vegetative and reproductive tissues impacts cereal grain production. Despite great agricultural importance, sink–source relationships have not been fully characterized at the early reproductive stages in maize. Here, we quantify the accumulation of non-structural carbohydrates and patterns of gene expression in the top internode of the stem and the female inflorescence of maize at the onset of grain filling (reproductive stage R1). Top internode stem and female inflorescence tissues of the Puma maize inbred line were collected at reproductive stage R1 (without pollination) and non-structural carbohydrates were quantified by spectrophotometry. The female inflorescence accumulated starch at higher levels than the top internode of the stem. Global mRNA transcript levels were then evaluated in both tissues by RNA sequencing. Gene expression analysis identified 491 genes differentially expressed between the female inflorescence and the top stem internode. Gene ontology classification of differentially expressed genes showed enrichment for sucrose synthesis, the light-dependent reactions of photosynthesis, and transmembrane transporters. Our results suggest that sugar transporters play a key role in sugar partitioning in the maize stem and reveal previously uncharacterized differences between the female inflorescence and the top internode of the stem at early reproductive stages.
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Anwar K, Joshi R, Morales A, Das G, Yin X, Anten NPR, Raghuvanshi S, Bahuguna RN, Singh MP, Singh RK, Zanten M, Sasidharan R, Singla‐Pareek SL, Pareek A. Genetic diversity reveals synergistic interaction between yield components could improve the sink size and yield in rice. Food Energy Secur 2022. [DOI: 10.1002/fes3.334] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022] Open
Affiliation(s)
- Khalid Anwar
- Stress Physiology and Molecular Biology Laboratory School of Life Sciences Jawaharlal Nehru University New Delhi India
| | - Rohit Joshi
- Stress Physiology and Molecular Biology Laboratory School of Life Sciences Jawaharlal Nehru University New Delhi India
- Division of Biotechnology CSIR‐Institute of Himalayan Bioresource Technology Palampur India
| | - Alejandro Morales
- Centre for Crop Systems Analysis Plant Sciences Group Wageningen University & Research Wageningen The Netherlands
- Molecular Plant Physiology Institute of Environmental Biology Utrecht University Utrecht The Netherlands
- Plant Ecophysiology Institute of Environmental Biology Utrecht University Utrecht The Netherlands
| | - Gourab Das
- Stress Physiology and Molecular Biology Laboratory School of Life Sciences Jawaharlal Nehru University New Delhi India
| | - Xinyou Yin
- Centre for Crop Systems Analysis Plant Sciences Group Wageningen University & Research Wageningen The Netherlands
| | - Niels P. R. Anten
- Centre for Crop Systems Analysis Plant Sciences Group Wageningen University & Research Wageningen The Netherlands
| | - Saurabh Raghuvanshi
- Department of Plant Molecular Biology University of Delhi South Campus New Delhi India
| | - Rajeev N. Bahuguna
- Stress Physiology and Molecular Biology Laboratory School of Life Sciences Jawaharlal Nehru University New Delhi India
- Center for Advance Studies on Climate Change Dr. Rajendra Prasad Central Agricultural University, Pusa Samastipur India
| | - Madan Pal Singh
- Division of Plant Physiology Indian Agricultural Research Institute PUSA New Delhi India
| | - Rakesh K. Singh
- Crop Diversification and Genetics International Center for Biosaline Agriculture Academic City Dubai United Arab Emirates
| | - Martijn Zanten
- Molecular Plant Physiology Institute of Environmental Biology Utrecht University Utrecht The Netherlands
| | - Rashmi Sasidharan
- Plant Ecophysiology Institute of Environmental Biology Utrecht University Utrecht The Netherlands
| | - Sneh L. Singla‐Pareek
- Plant Stress Biology International Centre for Genetic Engineering and Biotechnology New Delhi India
| | - Ashwani Pareek
- Stress Physiology and Molecular Biology Laboratory School of Life Sciences Jawaharlal Nehru University New Delhi India
- National Agri‐Food Biotechnology Institute Mohali India
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Khan MT, Ahmed S, Shah AA. Regulatory role of folic acid in biomass production and physiological activities of Coriandrum sativum L. under irrigation regimes. INTERNATIONAL JOURNAL OF PHYTOREMEDIATION 2022; 24:1025-1038. [PMID: 34705569 DOI: 10.1080/15226514.2021.1993785] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/10/2023]
Abstract
Water deficiency represents the major cause that affects agricultural output globally. A water-saving strategy was introduced by using water deficit conditions and growth regulators. Foliar application of folic acid (FA) has been found suitable not only for drought stress alleviation in Coriandrum. sativum but also beneficial for improvement in growth and yield under water deficit circumstances. The current study examined the potential roles of FA under drought to improve C. sativum growth. The C. sativum variety was subjected to three levels of irrigation regimes (IR100, IR75, and IR50) with or without the foliar application of FA concentrations. The results showed that the application of 50 mM FA was very effective in improving the plant height, number of secondary branches, number of umbels, and leaf area index in comparison to FA water deficit treated plants alone under IR75 and IR50. Similarly, physiological and gaseous exchange parameters also upgraded that improved the economic yield (81 and 163%), fresh biomass (28 and 131%), dry biomass (63 and 66%), and harvest index (10 and 58%) of C. sativum plants under irrigation regimes IR75 and IR50 compared to their non-treated FA plants. All the observed growth parameters showed a positive correlation with each other vs. LAI except a weight of 1,000. Overall, this study indicated that foliar-applied 50 mM FA may be used as an alternate strategy to improve C. sativum performance in biomass production and can play a key part in solving difficulties caused by drought stress on plant development.
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Affiliation(s)
- Muhammad Tajammal Khan
- Institute of Botany, University of the Punjab, Lahore, Pakistan
- Division of Science and Technology, Department of Botany, University of Education, Lahore, Pakistan
| | - Shakil Ahmed
- Institute of Botany, University of the Punjab, Lahore, Pakistan
| | - Anis Ali Shah
- Institute of Botany, University of the Punjab, Lahore, Pakistan
- Department of Botany, University of Narowal, Narowal, Pakistan
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Chen DG, Zhou XQ, Chen K, Chen PL, Guo J, Liu CG, Chen YD. Fine-mapping and candidate gene analysis of a major locus controlling leaf thickness in rice ( Oryza sativa L.). MOLECULAR BREEDING : NEW STRATEGIES IN PLANT IMPROVEMENT 2022; 42:6. [PMID: 35103045 PMCID: PMC8792131 DOI: 10.1007/s11032-022-01275-y] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/18/2021] [Accepted: 01/13/2022] [Indexed: 05/16/2023]
Abstract
UNLABELLED Leaf thickness is an important trait in rice (Oryza sativa L.). It affects both photosynthesis and sink-resource efficiency. However, compared to leaf length and length width, reports seldom focused on leaf thickness due to the complicated measurement and minor difference. To identify the quantitative trait loci (QTL) and explore the genetic mechanism regulating the natural variation of leaf thickness, we crossed a high leaf thickness variety Aixiuzhan (AXZ) to a thin leaf thickness variety Yangdao No.6 (YD 6) and evaluated 585 F2 individuals. We further use bulked sergeant analysis with whole-genome resequencing (BSA-seq) to identify five genomic regions, including chromosomes 1, 6, 9, 10, and 12. These regions represented significant allele frequency differentiation between thick and thin leaf thickness among the mixed pool offspring. Moreover, we conducted a linkage mapping using 276 individuals derived from the F2 population. We fine-mapped and confirmed that chromosome 9 contributed the primary explanation of phenotypic variance. We fine-mapped the candidate regions and confirmed that the chromosome 9 region contributed to flag leaf thickness in rice. We observed the virtual cellular slices and found that the bundle sheath cells in YD 6 flag leaf veins are fewer than AXZ. We analyzed the potential regions on chromosome 9 and narrowed the QTL candidate intervals in the 928-kb region. Candidate genes of this major QTL were listed as potentially controlled leaf thickness. These results provide promising evidence that cloning leaf thickness is associated with yield production in rice. SUPPLEMENTARY INFORMATION The online version contains supplementary material available at 10.1007/s11032-022-01275-y.
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Affiliation(s)
- Da-gang Chen
- Rice Research Institute, Guangdong Rice Engineering Laboratory, Guangdong Key Laboratory of New Technology in Rice Breeding, Guangdong Academy of Agricultural Sciences, Guangzhou, 510640 People’s Republic of China
| | - Xin-qiao Zhou
- Rice Research Institute, Guangdong Rice Engineering Laboratory, Guangdong Key Laboratory of New Technology in Rice Breeding, Guangdong Academy of Agricultural Sciences, Guangzhou, 510640 People’s Republic of China
| | - Ke Chen
- Rice Research Institute, Guangdong Rice Engineering Laboratory, Guangdong Key Laboratory of New Technology in Rice Breeding, Guangdong Academy of Agricultural Sciences, Guangzhou, 510640 People’s Republic of China
| | - Ping-li Chen
- Rice Research Institute, Guangdong Rice Engineering Laboratory, Guangdong Key Laboratory of New Technology in Rice Breeding, Guangdong Academy of Agricultural Sciences, Guangzhou, 510640 People’s Republic of China
| | - Jie Guo
- Rice Research Institute, Guangdong Rice Engineering Laboratory, Guangdong Key Laboratory of New Technology in Rice Breeding, Guangdong Academy of Agricultural Sciences, Guangzhou, 510640 People’s Republic of China
| | - Chuan-guang Liu
- Rice Research Institute, Guangdong Rice Engineering Laboratory, Guangdong Key Laboratory of New Technology in Rice Breeding, Guangdong Academy of Agricultural Sciences, Guangzhou, 510640 People’s Republic of China
| | - You-ding Chen
- Rice Research Institute, Guangdong Rice Engineering Laboratory, Guangdong Key Laboratory of New Technology in Rice Breeding, Guangdong Academy of Agricultural Sciences, Guangzhou, 510640 People’s Republic of China
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Zenda T, Liu S, Dong A, Li J, Wang Y, Liu X, Wang N, Duan H. Omics-Facilitated Crop Improvement for Climate Resilience and Superior Nutritive Value. FRONTIERS IN PLANT SCIENCE 2021; 12:774994. [PMID: 34925418 PMCID: PMC8672198 DOI: 10.3389/fpls.2021.774994] [Citation(s) in RCA: 20] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/13/2021] [Accepted: 11/08/2021] [Indexed: 05/17/2023]
Abstract
Novel crop improvement approaches, including those that facilitate for the exploitation of crop wild relatives and underutilized species harboring the much-needed natural allelic variation are indispensable if we are to develop climate-smart crops with enhanced abiotic and biotic stress tolerance, higher nutritive value, and superior traits of agronomic importance. Top among these approaches are the "omics" technologies, including genomics, transcriptomics, proteomics, metabolomics, phenomics, and their integration, whose deployment has been vital in revealing several key genes, proteins and metabolic pathways underlying numerous traits of agronomic importance, and aiding marker-assisted breeding in major crop species. Here, citing several relevant examples, we appraise our understanding on the recent developments in omics technologies and how they are driving our quest to breed climate resilient crops. Large-scale genome resequencing, pan-genomes and genome-wide association studies are aiding the identification and analysis of species-level genome variations, whilst RNA-sequencing driven transcriptomics has provided unprecedented opportunities for conducting crop abiotic and biotic stress response studies. Meanwhile, single cell transcriptomics is slowly becoming an indispensable tool for decoding cell-specific stress responses, although several technical and experimental design challenges still need to be resolved. Additionally, the refinement of the conventional techniques and advent of modern, high-resolution proteomics technologies necessitated a gradual shift from the general descriptive studies of plant protein abundances to large scale analysis of protein-metabolite interactions. Especially, metabolomics is currently receiving special attention, owing to the role metabolites play as metabolic intermediates and close links to the phenotypic expression. Further, high throughput phenomics applications are driving the targeting of new research domains such as root system architecture analysis, and exploration of plant root-associated microbes for improved crop health and climate resilience. Overall, coupling these multi-omics technologies to modern plant breeding and genetic engineering methods ensures an all-encompassing approach to developing nutritionally-rich and climate-smart crops whose productivity can sustainably and sufficiently meet the current and future food, nutrition and energy demands.
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Affiliation(s)
- Tinashe Zenda
- State Key Laboratory of North China Crop Improvement and Regulation, Hebei Agricultural University, Baoding, China
- Department of Crop Genetics and Breeding, College of Agronomy, Hebei Agricultural University, Baoding, China
- Department of Crop Science, Faculty of Agriculture and Environmental Science, Bindura University of Science Education, Bindura, Zimbabwe
| | - Songtao Liu
- Academy of Agriculture and Forestry Sciences, Hebei North University, Zhangjiakou, China
| | - Anyi Dong
- State Key Laboratory of North China Crop Improvement and Regulation, Hebei Agricultural University, Baoding, China
- Department of Crop Genetics and Breeding, College of Agronomy, Hebei Agricultural University, Baoding, China
| | - Jiao Li
- State Key Laboratory of North China Crop Improvement and Regulation, Hebei Agricultural University, Baoding, China
- Department of Crop Genetics and Breeding, College of Agronomy, Hebei Agricultural University, Baoding, China
| | - Yafei Wang
- State Key Laboratory of North China Crop Improvement and Regulation, Hebei Agricultural University, Baoding, China
- Department of Crop Genetics and Breeding, College of Agronomy, Hebei Agricultural University, Baoding, China
| | - Xinyue Liu
- State Key Laboratory of North China Crop Improvement and Regulation, Hebei Agricultural University, Baoding, China
- Department of Crop Genetics and Breeding, College of Agronomy, Hebei Agricultural University, Baoding, China
| | - Nan Wang
- State Key Laboratory of North China Crop Improvement and Regulation, Hebei Agricultural University, Baoding, China
- Department of Crop Genetics and Breeding, College of Agronomy, Hebei Agricultural University, Baoding, China
| | - Huijun Duan
- State Key Laboratory of North China Crop Improvement and Regulation, Hebei Agricultural University, Baoding, China
- Department of Crop Genetics and Breeding, College of Agronomy, Hebei Agricultural University, Baoding, China
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Zakari SA, Zaidi SHR, Sunusi M, Dauda KD. Nitrogen deficiency regulates premature senescence by modulating flag leaf function, ROS homeostasis, and intercellular sugar concentration in rice during grain filling. JOURNAL OF GENETIC ENGINEERING AND BIOTECHNOLOGY 2021; 19:177. [PMID: 34812974 PMCID: PMC8611147 DOI: 10.1186/s43141-021-00275-3] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/07/2021] [Accepted: 11/04/2021] [Indexed: 11/13/2022]
Abstract
Background Leaf senescence occurs in an age-dependent manner, but the rate and timing of leaf senescence may be influenced by various biotic and abiotic factors. In the course of stress, the function, composition, and different components of photosynthetic apparatus occur to be synthesized homogeneously or degraded paradoxically due to different senescence-related processes. Nitrogen (N) deficiency is one of the critical environmental factors that induce leaf senescence, and its incidence may curtail leaf photosynthetic function and markedly alter the genetic information of plants that might result in low grain yield. However, the physiological and genetic mechanism underlying N deficiency regulates premature senescence, and flag leaf function, ROS homeostasis, and intercellular sugar concentration in rice during grain filling are not well understood. In this paper, Zhehui7954 an excellent indica restorer line (wildtype) and its corresponding mutant (psf) with the premature senescence of flag leaves were used to study the effect of different N supplies in the alteration of physiological and biochemical components of flag leaf organ and its functions during grain filling. Results The results showed that the psf mutant appeared to be more susceptible to the varying N supply levels than WT. For instance, the psf mutant showed considerably lower Pn, Chl a, Chl b, and Car contents than its WT. N deficiency (LN) decreased leaves photosynthetic activities, N metabolites, but significantly burst O2•−, H2O2, and relative conductivity (R1/R2) concentrations, which was consistent with the expression levels of senescence-associated genes. Sucrose, glucose, and C/N ratio concentrations increased with a decrease in N level, which was closely associated with N and non-structural carbohydrate translocation rates. Increases in POD activity were positively linked with the senescence-related enhancement of ROS generation under LN conditions, whereas, SOD, CAT, and APX activities showed opposite trends. High N (HN) supply significantly inhibits the transcripts of carbohydrate biosynthesis genes, while N assimilation gene transcripts gradually increased along with leaf senescence. The psf mutant had a relatively higher grain yield under HN treatment than LN, while WT had a higher grain yield under MN than HN and LN. Conclusions This work revealed that the C/N ratio and ROS undergo a gradual increase driven by interlinking positive feedback, providing a physiological framework connecting the participation of sugars and N assimilation in the regulation of leaf senescence. These results could be useful for achieving a higher yield of rice production by appropriate N supply and plant senescence regulation. Supplementary Information The online version contains supplementary material available at 10.1186/s43141-021-00275-3.
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Affiliation(s)
- Shamsu Ado Zakari
- Institute of Crop Science, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou, 310058, China. .,Department of Crop Production, Audu Bako College of Agriculture, Dambatta, Kano, Nigeria.
| | - Syed Hassan Raza Zaidi
- Institute of Crop Science, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou, 310058, China.,Department of Agronomy, University of Agriculture, Dera Ismail Khan, 29220, Pakistan
| | - Mustapha Sunusi
- Institute of Crop Science, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou, 310058, China.,Department of Crop Science, Faculty of Agriculture, Federal University Dutse, Jigawa, Nigeria
| | - Kabiru Dawaki Dauda
- Department of Crop Science, Kano University of Science and Technology, Wudil, Kano, Nigeria
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Lazare S, Perry A, Tel-Zur N, Sperling O, Yermiyahu U, Yasuor H, Dag A. The metabolic reserves, carbohydrate balance and nutritional status of jojoba (Simmondsia chinensis), in relation to its annual cycle and fruit load. FUNCTIONAL PLANT BIOLOGY : FPB 2021; 48:1277-1287. [PMID: 34600598 DOI: 10.1071/fp21123] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/20/2021] [Accepted: 09/16/2021] [Indexed: 06/13/2023]
Abstract
Jojoba (Simmondsia chinensis (Link) Schneider) holds high industrial value and an extended cultivation trend. Despite its increased importance, there is a lack of fundamental information about its metabolic reserves and development. Our objective was to characterise metabolite allocation and fluctuations in the carbohydrate and nutrient balance of jojoba plants, as affected by fruit load and the plant's annual cycle. Metabolite profiles were performed for each organ. Soluble carbohydrates (SC) and starch concentrations were surveyed in underground and aboveground organs of high-yield and fruit-removed plants. Simultaneously, nitrogen, potassium and phosphorus were determined in the leaves to evaluate the plant's nutritional status. We found that sucrose and pinitol were the most abundant sugars in all jojoba organs. Each sugar had a 'preferred' organ: glucose was accumulated mainly in the leaves, sucrose and pinitol in woody branches, and fructose in the trunk wood. We found that fruit load significantly influenced the carbohydrate levels in green branches, trunk wood and thin roots. The phenological stage strongly affected the SC-starch balance. Among the examined minerals, only the leaf potassium level was significantly influenced by fruit load. We conclude that jojoba's nutrient and carbohydrate balance is affected by fruit load and the phenological stage, and describe the organ-specific metabolic reserves.
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Affiliation(s)
- Silit Lazare
- Gilat Research Center, Agricultural Research Organization, Gilat, Israel
| | - Aviad Perry
- Gilat Research Center, Agricultural Research Organization, Gilat, Israel; and The Albert Katz International School for Desert Studies, The Jacob Blaustein Institutes for Desert Research, Ben-Gurion University of the Negev, Sede Boqer, Israel
| | - Noemi Tel-Zur
- French Associates Institutes for Agriculture and Biotechnology of Drylands, The Jacob Blaustein Institutes for Desert Research, Ben-Gurion University of the Negev, Sede Boqer, Israel
| | - Or Sperling
- Gilat Research Center, Agricultural Research Organization, Gilat, Israel
| | - Uri Yermiyahu
- Gilat Research Center, Agricultural Research Organization, Gilat, Israel
| | - Hagai Yasuor
- Gilat Research Center, Agricultural Research Organization, Gilat, Israel
| | - Arnon Dag
- Gilat Research Center, Agricultural Research Organization, Gilat, Israel
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Kumar A, Prajapati D, Devi KA, Pal A, Choudhary U, Dashora A, Choudhary J, Joshi A, Saharan V. Slow-release Zn application through Zn-chitosan nanoparticles in wheat to intensify source activity and sink strength. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2021; 168:272-281. [PMID: 34666280 DOI: 10.1016/j.plaphy.2021.10.013] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/21/2021] [Revised: 10/02/2021] [Accepted: 10/07/2021] [Indexed: 06/13/2023]
Abstract
Source activity and sink strength are important aspects to measure growth and yield in wheat. Despite zinc's extended functions in the amendment of plant metabolic activities, critical research findings are missing on mapping the elusive interplays of slow-release zinc (Zn) application from nanoparticles (NPs) in crop plants. The present study reports that slow-releasing Zn application through Zn-chitosan NPs bestows myriad effects on source activity and sink strength in wheat plants. Herein, effects of foliar application of Zn-chitosan NPs (0.04-0.16%; w/v) at booting stage of wheat crop were evaluated to quantify the source sink potential compared to ZnSO4. Zn-chitosan NPs endowed elevated source activity by up-regulating cellular redox homeostasis by improving the antioxidant status, cellular stability and higher photosynthesis. Cognately, in the field experiment, NPs (0.08-0.16%, w/v) significantly spurred sink strength by up-regulating starch biosynthesis enzymes viz. sucrose synthase (SUS), invertase (INV), ADP-glucose pyrophosphorylase (AGPase), soluble starch synthase (SSS) and accumulated more starch in developing wheat grains. Concomitantly, higher spike lengths without awns, significantly higher number of grains/spike, test weight (24% more than ZnSO4 treatment), yield (21% more than ZnSO4 treatment), biological yield and harvest index quantified the higher sink size to further validate the better sink strength in slow-release Zn application via chitosan NPs.
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Affiliation(s)
- Ashok Kumar
- Department of Molecular Biology and Biotechnology, Rajasthan College of Agriculture, Maharana Pratap University of Agriculture and Technology, Udaipur, Rajasthan, 313 001, India
| | - Damyanti Prajapati
- Department of Molecular Biology and Biotechnology, Rajasthan College of Agriculture, Maharana Pratap University of Agriculture and Technology, Udaipur, Rajasthan, 313 001, India
| | - Khaidem Aruna Devi
- Department of Molecular Biology and Biotechnology, Rajasthan College of Agriculture, Maharana Pratap University of Agriculture and Technology, Udaipur, Rajasthan, 313 001, India
| | - Ajay Pal
- Department of Biochemistry, College of Basic Sciences and Humanities, Chaudhary Charan Singh Haryana Agricultural University, Hisar, Haryana, 125 004, India
| | - Urmila Choudhary
- All India Coordinated Research Project on Wheat and Barley, Rajasthan College of Agriculture, Maharana Pratap University of Agriculture and Technology, Udaipur, Rajasthan, 313 001, India
| | - Abhay Dashora
- All India Coordinated Research Project on Wheat and Barley, Rajasthan College of Agriculture, Maharana Pratap University of Agriculture and Technology, Udaipur, Rajasthan, 313 001, India
| | - Jagdish Choudhary
- All India Coordinated Research Project on Wheat and Barley, Rajasthan College of Agriculture, Maharana Pratap University of Agriculture and Technology, Udaipur, Rajasthan, 313 001, India
| | - Arunabh Joshi
- Department of Molecular Biology and Biotechnology, Rajasthan College of Agriculture, Maharana Pratap University of Agriculture and Technology, Udaipur, Rajasthan, 313 001, India
| | - Vinod Saharan
- Department of Molecular Biology and Biotechnology, Rajasthan College of Agriculture, Maharana Pratap University of Agriculture and Technology, Udaipur, Rajasthan, 313 001, India.
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Blagodatskaya E, Tarkka M, Knief C, Koller R, Peth S, Schmidt V, Spielvogel S, Uteau D, Weber M, Razavi BS. Bridging Microbial Functional Traits With Localized Process Rates at Soil Interfaces. Front Microbiol 2021; 12:625697. [PMID: 34777265 PMCID: PMC8581545 DOI: 10.3389/fmicb.2021.625697] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/03/2020] [Accepted: 09/01/2021] [Indexed: 12/30/2022] Open
Abstract
In this review, we introduce microbially-mediated soil processes, players, their functional traits, and their links to processes at biogeochemical interfaces [e.g., rhizosphere, detritusphere, (bio)-pores, and aggregate surfaces]. A conceptual view emphasizes the central role of the rhizosphere in interactions with other biogeochemical interfaces, considering biotic and abiotic dynamic drivers. We discuss the applicability of three groups of traits based on microbial physiology, activity state, and genomic functional traits to reflect microbial growth in soil. The sensitivity and credibility of modern molecular approaches to estimate microbial-specific growth rates require further development. A link between functional traits determined by physiological (e.g., respiration, biomarkers) and genomic (e.g., genome size, number of ribosomal gene copies per genome, expression of catabolic versus biosynthetic genes) approaches is strongly affected by environmental conditions such as carbon, nutrient availability, and ecosystem type. Therefore, we address the role of soil physico-chemical conditions and trophic interactions as drivers of microbially-mediated soil processes at relevant scales for process localization. The strengths and weaknesses of current approaches (destructive, non-destructive, and predictive) for assessing process localization and the corresponding estimates of process rates are linked to the challenges for modeling microbially-mediated processes in heterogeneous soil microhabitats. Finally, we introduce a conceptual self-regulatory mechanism based on the flexible structure of active microbial communities. Microbial taxa best suited to each successional stage of substrate decomposition become dominant and alter the community structure. The rates of decomposition of organic compounds, therefore, are dependent on the functional traits of dominant taxa and microbial strategies, which are selected and driven by the local environment.
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Affiliation(s)
- Evgenia Blagodatskaya
- Department of Soil Ecology, Helmholtz Centre for Environmental Research, Halle (Saale), Germany
- Agro-Technological Institute, RUDN University, Moscow, Russia
| | - Mika Tarkka
- Department of Soil Ecology, Helmholtz Centre for Environmental Research, Halle (Saale), Germany
- German Centre for Integrative Biodiversity Research Halle–Jena–Leipzig, Leipzig, Germany
| | - Claudia Knief
- Institute of Crop Science and Resource Conservation – Molecular Biology of the Rhizosphere, University of Bonn, Bonn, Germany
| | - Robert Koller
- Institute of Bio- and Geosciences, IBG-2: Plant Sciences, Forschungszentrum Jülich GmbH, Jülich, Germany
| | - Stephan Peth
- Institute of Soil Science, University of Hannover, Hanover, Germany
| | | | - Sandra Spielvogel
- Department Soil Science, Institute for Plant Nutrition and Soil Science, Christian-Albrechts University Kiel, Kiel, Germany
| | - Daniel Uteau
- Department of Soil Science, Faculty of Organic Agricultural Sciences, University of Kassel, Kassel, Germany
| | | | - Bahar S. Razavi
- Department of Soil and Plant Microbiome, Institute of Phytopathology, Christian-Albrechts-University of Kiel, Kiel, Germany
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García-Parra M, Roa-Acosta D, García-Londoño V, Moreno-Medina B, Bravo-Gomez J. Structural Characterization and Antioxidant Capacity of Quinoa Cultivars Using Techniques of FT-MIR and UHPLC/ESI-Orbitrap MS Spectroscopy. PLANTS (BASEL, SWITZERLAND) 2021; 10:2159. [PMID: 34685968 PMCID: PMC8539964 DOI: 10.3390/plants10102159] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/03/2021] [Revised: 08/27/2021] [Accepted: 08/28/2021] [Indexed: 11/17/2022]
Abstract
The existence of more of 16,000 varieties of quinoa accessions around the world has caused a disregard on their structural and phytochemical characteristics. Most of such accessions belong to cultivars settled in Colombia. The goal of this research was to evaluate the structural attributes and antioxidant capacities from six quinoa cultivars with high productive potential from central regions in Colombia. This study used middle-range infrared spectroscopy (IR-MIR) to determine the proteins, starch and lipids distinctive to quinoa grains. Ultra-high-performance liquid chromatography electrospray ionization Orbitrap, along with high-resolution mass spectrometry (UHPLC/ESI-Orbitrap MS), were also used to identify the existence of polyphenols in cultivars. The antioxidant capacity was determined through DPPH, ABTS and FRAP. The spectrums exhibited significant variances on the transmittance bands associated with 2922 cm-1, 1016 cm-1 and 1633 cm-1. Moreover, the intensity variations on the peaks from the secondary protein structure were identified, mainly on the bands associated with β-Sheet-1 and -2, random coil α elice and β-turns-2 and -3. Changes found in the ratios 996 cm-1/1014 cm-1 and 1041 cm-1/1014 cm-1 were associated with the crystalline/amorphous affinity. Regarding the antioxidant capacity, great differences were identified (p < 0.001) mainly through FRAP methods, while the phenolic acids and flavonoids were determined by UHPLC/ESI-Orbitrap MS techniques. The presence of apigenin and pinocembrin on grains was reported for the first time. Titicaca and Nariño were the most phytochemically diverse quinoa seeds.
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Affiliation(s)
- Miguel García-Parra
- Doctoral Program in Agriculture and Agroindustrial Science, Agriculture Department, Universidad del Cauca, Popayán 190002, Colombia
| | - Diego Roa-Acosta
- Agroindustry Department, Faculty of Agricultural Sciences, Universidad del Cauca, Popayán 190002, Colombia; (D.R.-A.); (J.B.-G.)
| | - Víctor García-Londoño
- Institute of Polymer and Nanotechnology, Facultad de Arquitectura Diseño y Urbanismo, University of Buenos Aires-CONICET, Intendente Güiraldes 2160, Buenos Aires C1428EGA, Argentina;
| | - Brigitte Moreno-Medina
- Facultad de Ciencias Agropecuarias, Universidad Pedagógica y Tecnológica de Colombia (UPTC), Tunja 150002, Colombia;
| | - Jesús Bravo-Gomez
- Agroindustry Department, Faculty of Agricultural Sciences, Universidad del Cauca, Popayán 190002, Colombia; (D.R.-A.); (J.B.-G.)
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Efficacy of biological, chemical and cultural practices for the management of foot and root rot disease of black cumin. BIOCATALYSIS AND AGRICULTURAL BIOTECHNOLOGY 2021. [DOI: 10.1016/j.bcab.2021.102193] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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48
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Xiao W, Hu S, Zou X, Cai R, Liao R, Lin X, Yao R, Guo X. Lectin receptor-like kinase LecRK-VIII.2 is a missing link in MAPK signaling-mediated yield control. PLANT PHYSIOLOGY 2021; 187:303-320. [PMID: 34618128 PMCID: PMC8418426 DOI: 10.1093/plphys/kiab241] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/02/2021] [Accepted: 05/01/2021] [Indexed: 05/13/2023]
Abstract
The energy allocation for vegetative and reproductive growth is regulated by developmental signals and environmental cues, which subsequently affects seed output. However, the molecular mechanism underlying how plants coordinate yield-related traits to control yield in changing source-sink relationships remains largely unknown. Here, we discovered the lectin receptor-like kinase LecRK-VIII.2 as a specific receptor-like kinase that coordinates silique number, seed size, and seed number to determine seed yield in Arabidopsis (Arabidopsis thaliana). The lecrk-VIII.2 mutants develop smaller seeds, but more siliques and seeds, leading to increased yield. In contrast, the plants overexpressing LecRK-VIII.2 form bigger seeds, but less siliques and seeds, which results in similar yield to that of wild-type plants. Interestingly, LecRK-VIII.2 promotes the growth of the rosette, root, and stem by coordinating the source-sink relationship. Additionally, LecRK-VIII.2 positively regulates cell expansion and proliferation in the seed coat, and maternally controls seed size. The genetic and biochemical analyses demonstrated that LecRK-VIII.2 acts upstream of the mitogen-activated protein kinase (MAPK) gene MPK6 to regulate silique number, seed size, and seed number. Collectively, these findings uncover LecRK-VIII.2 as an upstream component of the MAPK signaling pathway to control yield-related traits and suggest its potential for crop improvement aimed at developing plants with stable yield, a robust root system, and improved lodging resistance.
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Affiliation(s)
- Wenjun Xiao
- College of Biology, Hunan University, Changsha 410082, China
| | - Shuai Hu
- School of Life Sciences, Tsinghua University, Beijing 100084, China
| | - Xiaoxiao Zou
- College of Biology, Hunan University, Changsha 410082, China
| | - Ruqiong Cai
- College of Biology, Hunan University, Changsha 410082, China
| | - Rui Liao
- College of Biology, Hunan University, Changsha 410082, China
| | - Xiaoxia Lin
- College of Biology, Hunan University, Changsha 410082, China
| | - Ruifeng Yao
- College of Biology, Hunan University, Changsha 410082, China
| | - Xinhong Guo
- College of Biology, Hunan University, Changsha 410082, China
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Guo X, Ma BL, McLaughlin NB, Wu X, Chen B, Gao Y. Nitrogen utilisation-efficient oilseed rape (Brassica napus) genotypes exhibit stronger growth attributes from flowering stage onwards. FUNCTIONAL PLANT BIOLOGY : FPB 2021; 48:755-765. [PMID: 33715767 DOI: 10.1071/fp20263] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/26/2020] [Accepted: 02/11/2021] [Indexed: 06/12/2023]
Abstract
Preliminary studies observed a lower growth activity during the vegetative stage with higher growth attributes at the pod-filling stage among the high nitrogen (N) utilisation efficiency (NUtE) oilseed rape (Brassica napus L.) genotypes, compared with the low NUtE genotypes. Therefore, we hypothesised that there would exist a critical growth stage when distinctive phenotypic traits are exhibited to regulate yield formation and NUE. A field experiment and a hydroponic culture were conducted to characterise the differences in shoot and root physiological indicators of the high and low NUtE oilseed rape genotypes at seedling, bud, bolting, flowering and pod-filling stages. We found that flowering was the critical period when the reverse growth habit occurred between high and low NUtE genotypes. The high NUtE genotypes displayed larger values of root traits, stronger N uptake kinetics parameters, higher activity of leaf glutamine synthetase (GS) and glutamate synthetase (GOGAT), larger SPAD values and net photosynthetic rate, ultimately leading to higher seed yield and NUE. Our results indicate that flowering is the critical growth stage to distinguish the high from low NUtE oilseed rape genotypes, and plant breeders may focus on selecting root and shoot phenotypic traits from flowering stage onwards to achieve both high yields and NUE for oilseed rape genotypes.
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Affiliation(s)
- Xiao Guo
- College of Natural Resource and Environment, Northwest A and F University, 712100 Yangling, Shaanxi, China; and Ottawa Research and Development Centre, Agriculture and Agri-Food Canada, K1A 0C6 Ottawa, Ontario, Canada
| | - Bao-Luo Ma
- Ottawa Research and Development Centre, Agriculture and Agri-Food Canada, K1A 0C6 Ottawa, Ontario, Canada
| | - Neil B McLaughlin
- Ottawa Research and Development Centre, Agriculture and Agri-Food Canada, K1A 0C6 Ottawa, Ontario, Canada
| | - Xiaoming Wu
- Institute of Oil Crop Research, Chinese Academy of Agricultural Sciences, 430062 Wuhan, Hubei, China
| | - Biyun Chen
- Institute of Oil Crop Research, Chinese Academy of Agricultural Sciences, 430062 Wuhan, Hubei, China
| | - Yajun Gao
- College of Natural Resource and Environment, Northwest A and F University, 712100 Yangling, Shaanxi, China; and Key Laboratory of Plant Nutrition and the Agri-environment in Northwest China, Ministry of Agriculture, 712100 Yangling, Shaanxi, China; and Corresponding author.
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50
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Ferguson JN, Tidy AC, Murchie EH, Wilson ZA. The potential of resilient carbon dynamics for stabilizing crop reproductive development and productivity during heat stress. PLANT, CELL & ENVIRONMENT 2021; 44:2066-2089. [PMID: 33538010 DOI: 10.1111/pce.14015] [Citation(s) in RCA: 18] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/15/2020] [Revised: 01/21/2021] [Accepted: 01/22/2021] [Indexed: 05/20/2023]
Abstract
Impaired carbon metabolism and reproductive development constrain crop productivity during heat stress. Reproductive development is energy intensive, and its requirement for respiratory substrates rises as associated metabolism increases with temperature. Understanding how these processes are integrated and the extent to which they contribute to the maintenance of yield during and following periods of elevated temperatures is important for developing climate-resilient crops. Recent studies are beginning to demonstrate links between processes underlying carbon dynamics and reproduction during heat stress, consequently a summation of research that has been reported thus far and an evaluation of purported associations are needed to guide and stimulate future research. To this end, we review recent studies relating to source-sink dynamics, non-foliar photosynthesis and net carbon gain as pivotal in understanding how to improve reproductive development and crop productivity during heat stress. Rapid and precise phenotyping during narrow phenological windows will be important for understanding mechanisms underlying these processes, thus we discuss the development of relevant high-throughput phenotyping approaches that will allow for more informed decision-making regarding future crop improvement.
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Affiliation(s)
- John N Ferguson
- Division of Plant & Crop Science, University of Nottingham, Leicestershire, UK
- Future Food Beacon of Excellence, School of Biosciences, University of Nottingham, Leicestershire, UK
- Department of Plant Sciences, University of Cambridge, Cambridge, UK
| | - Alison C Tidy
- Division of Plant & Crop Science, University of Nottingham, Leicestershire, UK
| | - Erik H Murchie
- Division of Plant & Crop Science, University of Nottingham, Leicestershire, UK
| | - Zoe A Wilson
- Division of Plant & Crop Science, University of Nottingham, Leicestershire, UK
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