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For: Prejanò M, Alberto ME, Russo N, Toscano M, Marino T. The Effects of the Metal Ion Substitution into the Active Site of Metalloenzymes: A Theoretical Insight on Some Selected Cases. Catalysts 2020;10:1038. [DOI: 10.3390/catal10091038] [Citation(s) in RCA: 29] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]  Open
Number Cited by Other Article(s)
1
Hasani F, Tarrahimofrad H, Safa ZJ, Farrokhi N, Karkhane AA, Haghbeen K, Aminzadeh S. Expression optimization and characterization of a novel amylopullulanase from the thermophilic Cohnella sp. A01. Int J Biol Macromol 2024;279:135135. [PMID: 39208893 DOI: 10.1016/j.ijbiomac.2024.135135] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/05/2024] [Revised: 08/02/2024] [Accepted: 08/26/2024] [Indexed: 09/04/2024]
2
Hassan ME, Ibrahim GE, Abdella MAA. Enhancement of β-galactosidase catalytic activity and stability through covalent immobilization onto alginate/tea waste beads and evaluating its impact on the quality of some dairy products. Int J Biol Macromol 2024;278:134810. [PMID: 39154676 DOI: 10.1016/j.ijbiomac.2024.134810] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/19/2024] [Revised: 08/04/2024] [Accepted: 08/14/2024] [Indexed: 08/20/2024]
3
Irianto VS, Demirkan E, Cetinkaya AA. UV mutagenesis for lipase overproduction from Bacillus cereus ATA179, nutritional optimization, characterization and its usability in the detergent industry. Prep Biochem Biotechnol 2024;54:918-931. [PMID: 38156984 DOI: 10.1080/10826068.2023.2299441] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2024]
4
Abdul Aziz SFN, Salleh AB, Normi YM, Mohammad Latif MA, Alang Ahmad SA. Bioinspired mp20 mimicking uricase in ZIF-8: Metal ion dependent for controllable activity. Enzyme Microb Technol 2024;178:110439. [PMID: 38579423 DOI: 10.1016/j.enzmictec.2024.110439] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/01/2024] [Revised: 03/19/2024] [Accepted: 03/20/2024] [Indexed: 04/07/2024]
5
Tripathi A, Dubey KD. The mechanistic insights into different aspects of promiscuity in metalloenzymes. ADVANCES IN PROTEIN CHEMISTRY AND STRUCTURAL BIOLOGY 2024;141:23-66. [PMID: 38960476 DOI: 10.1016/bs.apcsb.2023.12.022] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 07/05/2024]
6
Bowling PE, Dasgupta S, Herbert JM. Eliminating Imaginary Vibrational Frequencies in Quantum-Chemical Cluster Models of Enzymatic Active Sites. J Chem Inf Model 2024;64:3912-3922. [PMID: 38648614 DOI: 10.1021/acs.jcim.4c00221] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/25/2024]
7
Prakasha G, Revanasiddappa H, Jayalakshmi B, Borappa S, Siddaiah K, Shivamallu C, Shati AA, Alfaifi MY, Elbehairi SEI, Singh P, Setty PBS, Kollur SP. Co(III), Ni(II), Pd(II) and Pt(II) complexes derived from new benzimidazole-based imine ligands: Preparation, structure, antibacterial, HSA binding and DNA interaction studies. Inorganica Chim Acta 2024;565:121981. [DOI: 10.1016/j.ica.2024.121981] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/02/2024]
8
Omar MN, Rahman RNZRA, Noor NDM, Latip W, Knight VF, Ali MSM. Exploring the Antarctic aminopeptidase P from Pseudomonas sp. strain AMS3 through structural analysis and molecular dynamics simulation. J Biomol Struct Dyn 2024:1-13. [PMID: 38555730 DOI: 10.1080/07391102.2024.2331093] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2023] [Accepted: 03/11/2024] [Indexed: 04/02/2024]
9
Ciardullo G, Parise A, Prejanò M, Marino T. Viral RNA Replication Suppression of SARS-CoV-2: Atomistic Insights into Inhibition Mechanisms of RdRp Machinery by ddhCTP. J Chem Inf Model 2024;64:1593-1604. [PMID: 38412057 DOI: 10.1021/acs.jcim.3c01919] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/29/2024]
10
Yusof NY, Quay DHX, Kamaruddin S, Jonet MA, Md Illias R, Mahadi NM, Firdaus-Raih M, Abu Bakar FD, Abdul Murad AM. Biochemical and in silico structural characterization of a cold-active arginase from the psychrophilic yeast, Glaciozyma antarctica PI12. Extremophiles 2024;28:15. [PMID: 38300354 DOI: 10.1007/s00792-024-01333-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/02/2023] [Accepted: 12/30/2023] [Indexed: 02/02/2024]
11
Aberuagba A, Joel EB, Bello AJ, Igunnu A, Malomo SO, Olorunniji FJ. Thermophilic PHP Protein Tyrosine Phosphatases (Cap8C and Wzb) from Mesophilic Bacteria. Int J Mol Sci 2024;25:1262. [PMID: 38279261 PMCID: PMC10816263 DOI: 10.3390/ijms25021262] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/29/2023] [Revised: 01/14/2024] [Accepted: 01/17/2024] [Indexed: 01/28/2024]  Open
12
Wang W, Zhu J, Huang Q, Zhu L, Wang D, Li W, Yu W. DFT Exploration of Metal Ion-Ligand Binding: Toward Rational Design of Chelating Agent in Semiconductor Manufacturing. Molecules 2024;29:308. [PMID: 38257221 PMCID: PMC10819218 DOI: 10.3390/molecules29020308] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/07/2023] [Revised: 12/27/2023] [Accepted: 12/30/2023] [Indexed: 01/24/2024]  Open
13
Thanh Ha DT, Kim Thoa LT, Phuong Thao TT, Dung TT, Minh Ha TT, Phuong Lan TT, Khoo KS, Show PL, Huy ND. Production of extracellular agarase from Priestia megaterium AT7 and evaluation on marine algae hydrolysis. Enzyme Microb Technol 2024;172:110339. [PMID: 37857079 DOI: 10.1016/j.enzmictec.2023.110339] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/09/2022] [Revised: 10/03/2023] [Accepted: 10/04/2023] [Indexed: 10/21/2023]
14
Sadighara P, Abedini AH, Irshad N, Ghazi-Khansari M, Esrafili A, Yousefi M. Association Between Non-alcoholic Fatty Liver Disease and Heavy Metal Exposure: a Systematic Review. Biol Trace Elem Res 2023;201:5607-5615. [PMID: 36929113 DOI: 10.1007/s12011-023-03629-9] [Citation(s) in RCA: 19] [Impact Index Per Article: 19.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 01/26/2023] [Accepted: 03/10/2023] [Indexed: 03/18/2023]
15
Chelyadina NS, Kapranov SV, Popov MA, Smirnova LL, Bobko NI. The mussel Mytilus galloprovincialis (Crimea, Black Sea) as a source of essential trace elements in human nutrition. Biol Trace Elem Res 2023;201:5415-5430. [PMID: 36881258 DOI: 10.1007/s12011-023-03607-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 01/16/2023] [Accepted: 02/23/2023] [Indexed: 03/08/2023]
16
Escamilla P, Bartella L, Sanz-Navarro S, Percoco RM, Di Donna L, Prejanò M, Marino T, Ferrando-Soria J, Armentano D, Leyva-Pérez A, Pardo E. Degradation of Penicillinic Antibiotics and β-Lactamase Enzymatic Catalysis in a Biomimetic Zn-Based Metal-Organic Framework. Chemistry 2023;29:e202301325. [PMID: 37279057 DOI: 10.1002/chem.202301325] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/27/2023] [Revised: 06/06/2023] [Accepted: 06/06/2023] [Indexed: 06/07/2023]
17
Tincu (Iurciuc) CE, Bouhadiba B, Atanase LI, Stan CS, Popa M, Ochiuz L. An Accessible Method to Improve the Stability and Reusability of Porcine Pancreatic α-Amylase via Immobilization in Gellan-Based Hydrogel Particles Obtained by Ionic Cross-Linking with Mg2+ Ions. Molecules 2023;28:4695. [PMID: 37375250 PMCID: PMC10302431 DOI: 10.3390/molecules28124695] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/28/2023] [Revised: 06/06/2023] [Accepted: 06/07/2023] [Indexed: 06/29/2023]  Open
18
Prejanò M, Toscano M, Marino T. Periodicity of the Affinity of Lanmodulin for Trivalent Lanthanides and Actinides: Structural and Electronic Insights from Quantum Chemical Calculations. Inorg Chem 2023;62:7461-7470. [PMID: 37128767 DOI: 10.1021/acs.inorgchem.3c00754] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/03/2023]
19
Berger MB, Cisneros GA. Distal Mutations in the β-Clamp of DNA Polymerase III* Disrupt DNA Orientation and Affect Exonuclease Activity. J Am Chem Soc 2023;145:3478-3490. [PMID: 36745735 PMCID: PMC10237177 DOI: 10.1021/jacs.2c11713] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
20
Azemin WA, Alias N, Ali AM, Shamsir MS. Structural and functional characterisation of HepTH1-5 peptide as a potential hepcidin replacement. J Biomol Struct Dyn 2023;41:681-704. [PMID: 34870559 DOI: 10.1080/07391102.2021.2011415] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
21
Chiyindiko E, Langner EH, Conradie J. DFT and electrochemical study on some iron(III) complexes with 2-hydroxybenzophenones. Inorganica Chim Acta 2023. [DOI: 10.1016/j.ica.2023.121445] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/18/2023]
22
An alkalophilic and thermostable polygalacturonase (PGase) from Pseudomonas sp. 13159349: purification, biochemical characterization and its efficacy in olive oil extraction. Biologia (Bratisl) 2023. [DOI: 10.1007/s11756-022-01310-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023]
23
Manganese Schiff Base Complexes, Crystallographic Studies, Anticancer Activities, and Molecular Docking. J CHEM-NY 2022. [DOI: 10.1155/2022/7062912] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]  Open
24
Hendrick Q, Nnolim NE, Nontongana N, Nwodo UU. Sphingobacterium multivorum HNFx produced thermotolerant and chemostable keratinase on chicken feathers. Biologia (Bratisl) 2022. [DOI: 10.1007/s11756-022-01126-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
25
Anye V, Kruger RF, Schubert WD. Structural and biophysical characterization of the multidomain xylanase Xyl. PLoS One 2022;17:e0269188. [PMID: 35657930 PMCID: PMC9165906 DOI: 10.1371/journal.pone.0269188] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/03/2021] [Accepted: 05/16/2022] [Indexed: 11/20/2022]  Open
26
Prejanò M, Romeo I, La Serra MA, Russo N, Marino T. Computational Study Reveals the Role of Water Molecules in the Inhibition Mechanism of LAT1 by 1,2,3-Dithiazoles. J Chem Inf Model 2021;61:5883-5892. [PMID: 34788052 PMCID: PMC8715508 DOI: 10.1021/acs.jcim.1c01012] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
27
Glueck DS. Intramolecular attack on coordinated nitriles: metallacycle intermediates in catalytic hydration and beyond. Dalton Trans 2021;50:15953-15960. [PMID: 34643205 DOI: 10.1039/d1dt02795f] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
28
Bhattacharyya R, Mukhopadhyay D, Nagarakshita VK, Bhattacharya S, Das A. Thermostable and organic solvent-tolerant acid pectinase from Aspergillus terreus FP6: purification, characterization and evaluation of its phytopigment extraction potential. 3 Biotech 2021;11:487. [PMID: 34790511 DOI: 10.1007/s13205-021-03033-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2021] [Accepted: 10/15/2021] [Indexed: 10/19/2022]  Open
29
Krivitskaya AV, Khrenova MG, Nemukhin AV. Two Sides of Quantum-Based Modeling of Enzyme-Catalyzed Reactions: Mechanistic and Electronic Structure Aspects of the Hydrolysis by Glutamate Carboxypeptidase. Molecules 2021;26:6280. [PMID: 34684866 PMCID: PMC8538779 DOI: 10.3390/molecules26206280] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/17/2021] [Revised: 10/12/2021] [Accepted: 10/13/2021] [Indexed: 11/16/2022]  Open
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