1
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Shouval HZ, Kirkwood A. Eligibility traces as a synaptic substrate for learning. Curr Opin Neurobiol 2025; 91:102978. [PMID: 39965463 DOI: 10.1016/j.conb.2025.102978] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/02/2024] [Revised: 01/22/2025] [Accepted: 01/27/2025] [Indexed: 02/20/2025]
Abstract
Animals can learn to associate a behavior or a stimulus with a delayed reward, this is essential for survival. A mechanism proposed for bridging this gap are synaptic eligibility traces, which are slowly decaying tags, which can lead to synaptic plasticity if followed by rewards. Recently, experiments have demonstrated the existence of synaptic eligibility traces in diverse neural systems, depending on either neuromodulators or plateau potentials. Evidence for both eligibility trace-dependent potentiation and depression of synaptic efficacies has emerged. We discuss the commonalities and differences of these different results. We show why the existence of both potentiation and depression is important because these opposing forces can lead to a synaptic stopping rule. Without a stopping rule, synapses would saturate at their upper bound thus leading to a loss of selectivity and representational power. We discuss the possible underlying mechanisms of the eligibility traces as well as their functional and theoretical significance.
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Affiliation(s)
- Harel Z Shouval
- Department of Neurobiology and Anatomy, University of Texas Medical School at Houston, Houston, TX, USA; Department of Electrical and Computer Engineering, Rice University, Houston, TX, USA.
| | - Alfredo Kirkwood
- Mind/Brain Institute, Johns Hopkins University, 3400 North Charles Street, 350 Dunning Hall, Baltimore, MD 21218, USA
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2
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Wu Y, Maass W. A simple model for Behavioral Time Scale Synaptic Plasticity (BTSP) provides content addressable memory with binary synapses and one-shot learning. Nat Commun 2025; 16:342. [PMID: 39747916 PMCID: PMC11695864 DOI: 10.1038/s41467-024-55563-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/30/2023] [Accepted: 12/13/2024] [Indexed: 01/04/2025] Open
Abstract
Recent experimental studies in the awake brain have identified a rule for synaptic plasticity that is instrumental for the instantaneous creation of memory traces in area CA1 of the mammalian brain: Behavioral Time scale Synaptic Plasticity. This one-shot learning rule differs in five essential aspects from previously considered plasticity mechanisms. We introduce a transparent model for the core function of this learning rule and establish a theory that enables a principled understanding of the system of memory traces that it creates. Theoretical predictions and numerical simulations show that our model is able to create a functionally powerful content-addressable memory without the need for high-resolution synaptic weights. Furthermore, it reproduces the repulsion effect of human memory, whereby traces for similar memory items are pulled apart to enable differential downstream processing. Altogether, our results create a link between synaptic plasticity in area CA1 of the hippocampus and its network function. They also provide a promising approach for implementing content-addressable memory with on-chip learning capability in highly energy-efficient crossbar arrays of memristors.
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Affiliation(s)
- Yujie Wu
- Department of Computing, The Hong Kong Polytechnic University, Hong Kong, SAR, China
| | - Wolfgang Maass
- Institute of Theoretical Computer Science, Graz University of Technology, Graz, Austria.
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3
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Moldwin T, Azran LS, Segev I. The calcitron: A simple neuron model that implements many learning rules via the calcium control hypothesis. PLoS Comput Biol 2025; 21:e1012754. [PMID: 39879254 PMCID: PMC11835382 DOI: 10.1371/journal.pcbi.1012754] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/19/2024] [Revised: 02/18/2025] [Accepted: 12/27/2024] [Indexed: 01/31/2025] Open
Abstract
Theoretical neuroscientists and machine learning researchers have proposed a variety of learning rules to enable artificial neural networks to effectively perform both supervised and unsupervised learning tasks. It is not always clear, however, how these theoretically-derived rules relate to biological mechanisms of plasticity in the brain, or how these different rules might be mechanistically implemented in different contexts and brain regions. This study shows that the calcium control hypothesis, which relates synaptic plasticity in the brain to the calcium concentration ([Ca2+]) in dendritic spines, can produce a diverse array of learning rules. We propose a simple, perceptron-like neuron model, the calcitron, that has four sources of [Ca2+]: local (following the activation of an excitatory synapse and confined to that synapse), heterosynaptic (resulting from the activity of other synapses), postsynaptic spike-dependent, and supervisor-dependent. We demonstrate that by modulating the plasticity thresholds and calcium influx from each calcium source, we can reproduce a wide range of learning and plasticity protocols, such as Hebbian and anti-Hebbian learning, frequency-dependent plasticity, and unsupervised recognition of frequently repeating input patterns. Moreover, by devising simple neural circuits to provide supervisory signals, we show how the calcitron can implement homeostatic plasticity, perceptron learning, and BTSP-inspired one-shot learning. Our study bridges the gap between theoretical learning algorithms and their biological counterparts, not only replicating established learning paradigms but also introducing novel rules.
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Affiliation(s)
- Toviah Moldwin
- Edmond and Lily Safra Center for Brain Sciences, The Hebrew University of Jerusalem, Jerusalem, Israel
| | - Li Shay Azran
- Edmond and Lily Safra Center for Brain Sciences, The Hebrew University of Jerusalem, Jerusalem, Israel
- Department of Brain Sciences, Weizmann Institute of Science, Rehovot, Israel
| | - Idan Segev
- Edmond and Lily Safra Center for Brain Sciences, The Hebrew University of Jerusalem, Jerusalem, Israel
- Department of Neurobiology, The Hebrew University of Jerusalem, Jerusalem, Israel
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4
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Calvin OL, Erickson MT, Walters CJ, Redish AD. Dorsal hippocampus represents locations to avoid as well as locations to approach during approach-avoidance conflict. PLoS Biol 2025; 23:e3002954. [PMID: 39808614 PMCID: PMC11731767 DOI: 10.1371/journal.pbio.3002954] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/19/2024] [Accepted: 11/26/2024] [Indexed: 01/16/2025] Open
Abstract
Worrying about perceived threats is a hallmark of multiple psychological disorders including anxiety. This concern about future events is particularly important when an individual is faced with an approach-avoidance conflict. Potential goals to approach are known to be represented in the dorsal hippocampus during theta cycles. Similarly, important information that is distant from the animal's position is represented during hippocampal high-synchrony events (HSEs), which coincide with sharp-wave ripples (SWRs). It is likely that potential future threats may be similarly represented. We examined how threats and rewards were represented within the hippocampus during approach-avoidance conflicts in rats faced with a predator-like robot guarding a food reward. We found decoding of the pseudo-predator's location during HSEs when hesitating in the nest and during theta prior to retreating as the rats approached the pseudo-predator. After the first attack, we observed new place fields appearing at the location of the robot (not the location the rat was when attacked). The anxiolytic diazepam reduced anxiety-like behavior and altered hippocampal local field potentials (LFPs), including reducing SWRs, suggesting that one potential mechanism of diazepam's actions may be through altered representations of imagined threat. These results suggest that hippocampal representation of potential threats could be an important mechanism that underlies worry and a potential target for anxiolytics.
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Affiliation(s)
- Olivia L. Calvin
- Department of Neuroscience, University of Minnesota, Minneapolis, Minnesota, United States of America
| | - Matthew T. Erickson
- Department of Neuroscience, University of Minnesota, Minneapolis, Minnesota, United States of America
| | - Cody J. Walters
- Department of Neuroscience, University of Minnesota, Minneapolis, Minnesota, United States of America
| | - A. David Redish
- Department of Neuroscience, University of Minnesota, Minneapolis, Minnesota, United States of America
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5
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Gonzalez KC, Negrean A, Liao Z, Terada S, Zhang G, Lee S, Ócsai K, Rózsa BJ, Lin MZ, Polleux F, Losonczy A. Synaptic basis of feature selectivity in hippocampal neurons. Nature 2025; 637:1152-1160. [PMID: 39695232 DOI: 10.1038/s41586-024-08325-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/18/2023] [Accepted: 10/31/2024] [Indexed: 12/20/2024]
Abstract
A central question in neuroscience is how synaptic plasticity shapes the feature selectivity of neurons in behaving animals1. Hippocampal CA1 pyramidal neurons display one of the most striking forms of feature selectivity by forming spatially and contextually selective receptive fields called place fields, which serve as a model for studying the synaptic basis of learning and memory. Various forms of synaptic plasticity have been proposed as cellular substrates for the emergence of place fields. However, despite decades of work, our understanding of how synaptic plasticity underlies place-field formation and memory encoding remains limited, largely due to a shortage of tools and technical challenges associated with the visualization of synaptic plasticity at the single-neuron resolution in awake behaving animals. To address this, we developed an all-optical approach to monitor the spatiotemporal tuning and synaptic weight changes of dendritic spines before and after the induction of a place field in single CA1 pyramidal neurons during spatial navigation. We identified a temporally asymmetric synaptic plasticity kernel resulting from bidirectional modifications of synaptic weights around the induction of a place field. Our work identified compartment-specific differences in the magnitude and temporal expression of synaptic plasticity between basal dendrites and oblique dendrites. Our results provide experimental evidence linking synaptic plasticity to the rapid emergence of spatial selectivity in hippocampal neurons, a critical prerequisite for episodic memory.
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Affiliation(s)
- Kevin C Gonzalez
- Department of Neuroscience, Columbia University, New York, NY, USA
- Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY, USA
| | - Adrian Negrean
- Department of Neuroscience, Columbia University, New York, NY, USA
- Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY, USA
- Allen Brain Institute, Seattle, WA, USA
| | - Zhenrui Liao
- Department of Neuroscience, Columbia University, New York, NY, USA
- Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY, USA
| | - Satoshi Terada
- Department of Neuroscience, Columbia University, New York, NY, USA
- Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY, USA
| | - Guofeng Zhang
- Department of Neurobiology, Stanford University, Stanford, CA, USA
- Department of Neurosurgery, The First Affiliated Hospital, Sun Yat-sen University, Guangdong, China
| | - Sungmoo Lee
- Department of Neurobiology, Stanford University, Stanford, CA, USA
| | - Katalin Ócsai
- BrainVisionCenter, Budapest, Hungary
- Department of Algebra and Geometry, Institute of Mathematics, Budapest University of Technology and Economics, Budapest, Hungary
| | - Balázs J Rózsa
- BrainVisionCenter, Budapest, Hungary
- Laboratory of 3D Functional Network and Dendritic Imaging, Institute of Experimental Medicine, Budapest, Hungary
- Faculty of Information Technology and Bionics, Pázmány Péter University, Budapest, Hungary
| | - Michael Z Lin
- Department of Neurobiology, Stanford University, Stanford, CA, USA
- Department of Bioengineering, Stanford University, Stanford, CA, USA
| | - Franck Polleux
- Department of Neuroscience, Columbia University, New York, NY, USA.
- Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY, USA.
| | - Attila Losonczy
- Department of Neuroscience, Columbia University, New York, NY, USA.
- Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY, USA.
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6
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Bayer KU, Giese KP. A revised view of the role of CaMKII in learning and memory. Nat Neurosci 2025; 28:24-34. [PMID: 39558039 DOI: 10.1038/s41593-024-01809-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/24/2024] [Accepted: 10/17/2024] [Indexed: 11/20/2024]
Abstract
The Ca2+/calmodulin (CaM)-dependent protein kinase II (CaMKII) plays a fundamental role in learning and possibly also in memory. However, current mechanistic models require fundamental revision. CaMKII autophosphorylation at Thr286 (pThr286) does not provide the molecular basis for long-term memory, as long believed. Instead, pThr286 mediates the signal processing required for induction of several distinct forms of synaptic plasticity, including Hebbian long-term potentiation and depression and non-Hebbian behavioral timescale synaptic plasticity. We discuss (i) the molecular computations by which CaMKII supports these diverse plasticity mechanisms, (ii) alternative CaMKII mechanisms that may contribute to the maintenance phase of LTP and (iii) the relationship of these mechanisms to behavioral learning and memory.
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Affiliation(s)
- Karl Ulrich Bayer
- Department of Pharmacology and Program in Neuroscience, University of Colorado Anschutz Medical Campus, Aurora, CO, USA.
| | - Karl Peter Giese
- Department of Basic and Clinical Neuroscience, King's College London, London, UK.
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7
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Li Y, Briguglio JJ, Romani S, Magee JC. Mechanisms of memory-supporting neuronal dynamics in hippocampal area CA3. Cell 2024; 187:6804-6819.e21. [PMID: 39454575 DOI: 10.1016/j.cell.2024.09.041] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/12/2024] [Revised: 08/27/2024] [Accepted: 09/26/2024] [Indexed: 10/28/2024]
Abstract
Hippocampal CA3 is central to memory formation and retrieval. Although various network mechanisms have been proposed, direct evidence is lacking. Using intracellular Vm recordings and optogenetic manipulations in behaving mice, we found that CA3 place-field activity is produced by a symmetric form of behavioral timescale synaptic plasticity (BTSP) at recurrent synapses among CA3 pyramidal neurons but not at synapses from the dentate gyrus (DG). Additional manipulations revealed that excitatory input from the entorhinal cortex (EC) but not the DG was required to update place cell activity based on the animal's movement. These data were captured by a computational model that used BTSP and an external updating input to produce attractor dynamics under online learning conditions. Theoretical analyses further highlight the superior memory storage capacity of such networks, especially when dealing with correlated input patterns. This evidence elucidates the cellular and circuit mechanisms of learning and memory formation in the hippocampus.
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Affiliation(s)
- Yiding Li
- Howard Hughes Medical Institute, Baylor College of Medicine, Houston, TX 77030, USA
| | - John J Briguglio
- Howard Hughes Medical Institute, Janelia Research Campus, Ashburn, VA 20147, USA
| | - Sandro Romani
- Howard Hughes Medical Institute, Janelia Research Campus, Ashburn, VA 20147, USA.
| | - Jeffrey C Magee
- Howard Hughes Medical Institute, Baylor College of Medicine, Houston, TX 77030, USA.
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8
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Xu J, Girardi-Schappo M, Beique JC, Longtin A, Maler L. Shortcutting from self-motion signals reveals a cognitive map in mice. eLife 2024; 13:RP95764. [PMID: 39526583 PMCID: PMC11554306 DOI: 10.7554/elife.95764] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2024] Open
Abstract
Animals navigate by learning the spatial layout of their environment. We investigated spatial learning of mice in an open maze where food was hidden in one of a hundred holes. Mice leaving from a stable entrance learned to efficiently navigate to the food without the need for landmarks. We developed a quantitative framework to reveal how the mice estimate the food location based on analyses of trajectories and active hole checks. After learning, the computed 'target estimation vector' (TEV) closely approximated the mice's route and its hole check distribution. The TEV required learning both the direction and distance of the start to food vector, and our data suggests that different learning dynamics underlie these estimates. We propose that the TEV can be precisely connected to the properties of hippocampal place cells. Finally, we provide the first demonstration that, after learning the location of two food sites, the mice took a shortcut between the sites, demonstrating that they had generated a cognitive map.
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Affiliation(s)
- Jiayun Xu
- Department of Cellular and Molecular Medicine, University of OttawaOttawaCanada
| | | | - Jean-Claude Beique
- Department of Cellular and Molecular Medicine, University of OttawaOttawaCanada
- Brain and Mind Institute, University of OttawaOttawaCanada
- Center for Neural Dynamics and Artificial Intelligence, University of OttawaOttawaCanada
| | - André Longtin
- Department of Cellular and Molecular Medicine, University of OttawaOttawaCanada
- Department of Physics, University of OttawaOttawaCanada
- Brain and Mind Institute, University of OttawaOttawaCanada
- Center for Neural Dynamics and Artificial Intelligence, University of OttawaOttawaCanada
| | - Leonard Maler
- Department of Cellular and Molecular Medicine, University of OttawaOttawaCanada
- Brain and Mind Institute, University of OttawaOttawaCanada
- Center for Neural Dynamics and Artificial Intelligence, University of OttawaOttawaCanada
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9
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Basu J, Nagel K. Neural circuits for goal-directed navigation across species. Trends Neurosci 2024; 47:904-917. [PMID: 39393938 PMCID: PMC11563880 DOI: 10.1016/j.tins.2024.09.005] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/07/2024] [Revised: 08/26/2024] [Accepted: 09/17/2024] [Indexed: 10/13/2024]
Abstract
Across species, navigation is crucial for finding both resources and shelter. In vertebrates, the hippocampus supports memory-guided goal-directed navigation, whereas in arthropods the central complex supports similar functions. A growing literature is revealing similarities and differences in the organization and function of these brain regions. We review current knowledge about how each structure supports goal-directed navigation by building internal representations of the position or orientation of an animal in space, and of the location or direction of potential goals. We describe input pathways to each structure - medial and lateral entorhinal cortex in vertebrates, and columnar and tangential neurons in insects - that primarily encode spatial and non-spatial information, respectively. Finally, we highlight similarities and differences in spatial encoding across clades and suggest experimental approaches to compare coding principles and behavioral capabilities across species. Such a comparative approach can provide new insights into the neural basis of spatial navigation and neural computation.
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Affiliation(s)
- Jayeeta Basu
- Neuroscience Institute, New York University Langone Health, New York, NY 10016, USA; Department of Neuroscience and Physiology, New York University Grossman School of Medicine, New York, NY 10016, USA; Department of Psychiatry, New York University Grossman School of Medicine, New York, NY 10016, USA; Center for Neural Science, New York University, New York, NY 10003, USA.
| | - Katherine Nagel
- Neuroscience Institute, New York University Langone Health, New York, NY 10016, USA; Department of Neuroscience and Physiology, New York University Grossman School of Medicine, New York, NY 10016, USA; Center for Neural Science, New York University, New York, NY 10003, USA.
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10
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Zheng ZS, Huszár R, Hainmueller T, Bartos M, Williams AH, Buzsáki G. Perpetual step-like restructuring of hippocampal circuit dynamics. Cell Rep 2024; 43:114702. [PMID: 39217613 PMCID: PMC11485410 DOI: 10.1016/j.celrep.2024.114702] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/07/2024] [Revised: 06/17/2024] [Accepted: 08/15/2024] [Indexed: 09/04/2024] Open
Abstract
Representation of the environment by hippocampal populations is known to drift even within a familiar environment, which could reflect gradual changes in single-cell activity or result from averaging across discrete switches of single neurons. Disambiguating these possibilities is crucial, as they each imply distinct mechanisms. Leveraging change point detection and model comparison, we find that CA1 population vectors decorrelate gradually within a session. In contrast, individual neurons exhibit predominantly step-like emergence and disappearance of place fields or sustained changes in within-field firing. The changes are not restricted to particular parts of the maze or trials and do not require apparent behavioral changes. The same place fields emerge, disappear, and reappear across days, suggesting that the hippocampus reuses pre-existing assemblies, rather than forming new fields de novo. Our results suggest an internally driven perpetual step-like reorganization of the neuronal assemblies.
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Affiliation(s)
- Zheyang Sam Zheng
- Center for Neural Science, New York University, New York, NY, USA; Neuroscience Institute, NYU Grossman School of Medicine, New York University, New York, NY, USA
| | - Roman Huszár
- Center for Neural Science, New York University, New York, NY, USA; Neuroscience Institute, NYU Grossman School of Medicine, New York University, New York, NY, USA
| | - Thomas Hainmueller
- Department of Psychiatry, NYU Grossman School of Medicine, New York University, New York, NY, USA
| | - Marlene Bartos
- Institute for Physiology I, University of Freiburg Medical Faculty, 79104 Freiburg, Germany
| | - Alex H Williams
- Center for Neural Science, New York University, New York, NY, USA; Neuroscience Institute, NYU Grossman School of Medicine, New York University, New York, NY, USA; Center for Computational Neuroscience, Flatiron Institute, New York, NY, USA.
| | - György Buzsáki
- Neuroscience Institute, NYU Grossman School of Medicine, New York University, New York, NY, USA; Department of Neurology, NYU Grossman School of Medicine, New York University, New York, NY, USA.
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11
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Dorian CC, Taxidis J, Golshani P. Non-spatial hippocampal behavioral timescale synaptic plasticity during working memory is gated by entorhinal inputs. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.08.27.609983. [PMID: 39253411 PMCID: PMC11383060 DOI: 10.1101/2024.08.27.609983] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Indexed: 09/11/2024]
Abstract
Behavioral timescale synaptic plasticity (BTSP) is a form of synaptic potentiation where the occurrence of a single large plateau potential in CA1 hippocampal neurons leads to the formation of reliable place fields during spatial learning tasks. We asked whether BTSP could also be a plasticity mechanism for generation of non-spatial responses in the hippocampus and what roles the medial and lateral entorhinal cortex (MEC and LEC) play in driving non-spatial BTSP. By performing simultaneous calcium imaging of dorsal CA1 neurons and chemogenetic inhibition of LEC or MEC while mice performed an olfactory working memory task' we discovered BTSP-like events which formed stable odor-specific fields. Critically' the success rate of calcium events generating a significant odor-field increased with event amplitude' and large events exhibited asymmetrical formation with the newly formed odor-fields preceding the timepoint of their induction event. We found that MEC and LEC play distinct roles in modulating BTSP: MEC inhibition reduced the frequency of large calcium events' while LEC inhibition reduced the success rate of odor-field generation. Using two-photon calcium imaging of LEC and MEC temporammonic axons projecting to CA1 we found that LEC projections to CA1 were strongly odor selective even early in task learning' while MEC projection odor-selectivity increased with task learning but remained weaker than LEC. Finally' we found that LEC and MEC inhibition both slowed representational drift of odor representations in CA1 across 48 hours. Altogether' odor-specific information from LEC and strong odor-timed activity from MEC are crucial for driving BTSP in CA1 which is a synaptic plasticity mechanism for generation of both spatial and non-spatial responses in the hippocampus that may play a role in explaining representational drift and one-shot learning of non-spatial information.
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Affiliation(s)
- Conor C. Dorian
- Department of Neurology, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, CA, USA
| | - Jiannis Taxidis
- Program in Neurosciences and Mental Health, Hospital for Sick Children, Toronto, Ontario, Canada
- Department of Physiology, University of Toronto, Toronto, Ontario, Canada
| | - Peyman Golshani
- Department of Neurology, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, CA, USA
- Greater Los Angeles Veteran Affairs Medical Center, Los Angeles, CA, USA
- Intellectual and Developmental Disabilities Research Center, University of California Los Angeles, Los Angeles, CA, USA
- Semel Institute for Neuroscience and Human Behavior, University of California, Los Angeles, CA, USA
- Integrative Center for Learning and Memory, University of California, Los Angeles, CA, USA
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12
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Yaeger CE, Vardalaki D, Zhang Q, Pham TLD, Brown NJ, Ji N, Harnett MT. A dendritic mechanism for balancing synaptic flexibility and stability. Cell Rep 2024; 43:114638. [PMID: 39167486 PMCID: PMC11403626 DOI: 10.1016/j.celrep.2024.114638] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/16/2024] [Revised: 06/28/2024] [Accepted: 07/30/2024] [Indexed: 08/23/2024] Open
Abstract
Biological and artificial neural networks learn by modifying synaptic weights, but it is unclear how these systems retain previous knowledge and also acquire new information. Here, we show that cortical pyramidal neurons can solve this plasticity-versus-stability dilemma by differentially regulating synaptic plasticity at distinct dendritic compartments. Oblique dendrites of adult mouse layer 5 cortical pyramidal neurons selectively receive monosynaptic thalamic input, integrate linearly, and lack burst-timing synaptic potentiation. In contrast, basal dendrites, which do not receive thalamic input, exhibit conventional NMDA receptor (NMDAR)-mediated supralinear integration and synaptic potentiation. Congruently, spiny synapses on oblique branches show decreased structural plasticity in vivo. The selective decline in NMDAR activity and expression at synapses on oblique dendrites is controlled by a critical period of visual experience. Our results demonstrate a biological mechanism for how single neurons can safeguard a set of inputs from ongoing plasticity by altering synaptic properties at distinct dendritic domains.
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Affiliation(s)
- Courtney E Yaeger
- McGovern Institute for Brain Research, Massachusetts Institute of Technology, Cambridge, MA 02139, USA; Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, MA 02139, USA
| | - Dimitra Vardalaki
- McGovern Institute for Brain Research, Massachusetts Institute of Technology, Cambridge, MA 02139, USA; Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, MA 02139, USA
| | - Qinrong Zhang
- Department of Physics, University of California, Berkeley, Berkeley, CA 94720, USA; Department of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA 94720, USA
| | - Trang L D Pham
- McGovern Institute for Brain Research, Massachusetts Institute of Technology, Cambridge, MA 02139, USA; Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, MA 02139, USA
| | - Norma J Brown
- McGovern Institute for Brain Research, Massachusetts Institute of Technology, Cambridge, MA 02139, USA; Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, MA 02139, USA
| | - Na Ji
- Department of Physics, University of California, Berkeley, Berkeley, CA 94720, USA; Department of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA 94720, USA; Helen Wills Neuroscience Institute, University of California, Berkeley, Berkeley, CA 94720, USA; Molecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA
| | - Mark T Harnett
- McGovern Institute for Brain Research, Massachusetts Institute of Technology, Cambridge, MA 02139, USA; Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.
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13
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Wolcott NS, Redman WT, Karpinska M, Jacobs EG, Goard MJ. The estrous cycle modulates hippocampal spine dynamics, dendritic processing, and spatial coding. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.08.02.606418. [PMID: 39131375 PMCID: PMC11312567 DOI: 10.1101/2024.08.02.606418] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Indexed: 08/13/2024]
Abstract
Histological evidence suggests that the estrous cycle exerts a powerful effect on CA1 neurons in mammalian hippocampus. Decades have passed since this landmark observation, yet how the estrous cycle shapes dendritic spine dynamics and hippocampal spatial coding in vivo remains a mystery. Here, we used a custom hippocampal microperiscope and two-photon calcium imaging to track CA1 pyramidal neurons in female mice over multiple cycles. Estrous cycle stage had a potent effect on spine dynamics, with heightened density during periods of greater estradiol (proestrus). These morphological changes were accompanied by greater somatodendritic coupling and increased infiltration of back-propagating action potentials into the apical dendrite. Finally, tracking CA1 response properties during navigation revealed enhanced place field stability during proestrus, evident at the single-cell and population level. These results establish the estrous cycle as a driver of large-scale structural and functional plasticity in hippocampal circuits essential for learning and memory.
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Affiliation(s)
- Nora S Wolcott
- Department of Molecular, Cellular, and Developmental Biology, University of California, Santa Barbara, Santa Barbara, CA 93106, USA
| | - William T Redman
- Interdepartmental Graduate Program in Dynamical Neuroscience, University of California, Santa Barbara, Santa Barbara, CA 93106, USA
- Intelligent Systems Center, Johns Hopkins University Applied Physics Lab, Laurel, MD 20723, USA
| | - Marie Karpinska
- Department of Computer Science, University of California, Santa Barbara, Santa Barbara, CA 93106, USA
- Department of Psychological & Brain Sciences, University of California, Santa Barbara, Santa Barbara, CA 93106, USA
| | - Emily G Jacobs
- Department of Psychological & Brain Sciences, University of California, Santa Barbara, Santa Barbara, CA 93106, USA
- Ann S. Bowers Women's Brain Health Initiative, University of California, Santa Barbara, Santa Barbara, CA 93106, USA
- Neuroscience Research Institute, University of California, Santa Barbara, Santa Barbara, CA 93106, USA
| | - Michael J Goard
- Department of Molecular, Cellular, and Developmental Biology, University of California, Santa Barbara, Santa Barbara, CA 93106, USA
- Department of Psychological & Brain Sciences, University of California, Santa Barbara, Santa Barbara, CA 93106, USA
- Neuroscience Research Institute, University of California, Santa Barbara, Santa Barbara, CA 93106, USA
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14
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Liao Z, Losonczy A. Learning, Fast and Slow: Single- and Many-Shot Learning in the Hippocampus. Annu Rev Neurosci 2024; 47:187-209. [PMID: 38663090 PMCID: PMC11519319 DOI: 10.1146/annurev-neuro-102423-100258] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/09/2024]
Abstract
The hippocampus is critical for memory and spatial navigation. The ability to map novel environments, as well as more abstract conceptual relationships, is fundamental to the cognitive flexibility that humans and other animals require to survive in a dynamic world. In this review, we survey recent advances in our understanding of how this flexibility is implemented anatomically and functionally by hippocampal circuitry, during both active exploration (online) and rest (offline). We discuss the advantages and limitations of spike timing-dependent plasticity and the more recently discovered behavioral timescale synaptic plasticity in supporting distinct learning modes in the hippocampus. Finally, we suggest complementary roles for these plasticity types in explaining many-shot and single-shot learning in the hippocampus and discuss how these rules could work together to support the learning of cognitive maps.
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Affiliation(s)
- Zhenrui Liao
- Department of Neuroscience and Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY, USA;
| | - Attila Losonczy
- Department of Neuroscience and Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY, USA;
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15
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Regele-Blasco E, Palmer LM. The plasticity of pyramidal neurons in the behaving brain. Philos Trans R Soc Lond B Biol Sci 2024; 379:20230231. [PMID: 38853566 PMCID: PMC11407500 DOI: 10.1098/rstb.2023.0231] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/23/2023] [Revised: 03/17/2024] [Accepted: 04/23/2024] [Indexed: 06/11/2024] Open
Abstract
Neurons are plastic. That is, they change their activity according to different behavioural conditions. This endows pyramidal neurons with an incredible computational power for the integration and processing of synaptic inputs. Plasticity can be investigated at different levels of investigation within a single neuron, from spines to dendrites, to synaptic input. Although most of our knowledge stems from the in vitro brain slice preparation, plasticity plays a vital role during behaviour by providing a flexible substrate for the execution of appropriate actions in our ever-changing environment. Owing to advances in recording techniques, the plasticity of neurons and the neural networks in which they are embedded is now beginning to be realized in the in vivo intact brain. This review focuses on the structural and functional synaptic plasticity of pyramidal neurons, with a specific focus on the latest developments from in vivo studies. This article is part of a discussion meeting issue 'Long-term potentiation: 50 years on'.
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Affiliation(s)
- Elena Regele-Blasco
- The Florey Institute of Neuroscience and Mental Health, The Florey Department of Neuroscience and Mental Health, University of Melbourne, Victoria3052, Australia
| | - Lucy M. Palmer
- The Florey Institute of Neuroscience and Mental Health, The Florey Department of Neuroscience and Mental Health, University of Melbourne, Victoria3052, Australia
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16
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Caya-Bissonnette L, Béïque JC. Half a century legacy of long-term potentiation. Curr Biol 2024; 34:R640-R662. [PMID: 38981433 DOI: 10.1016/j.cub.2024.05.008] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/11/2024]
Abstract
In 1973, two papers from Bliss and Lømo and from Bliss and Gardner-Medwin reported that high-frequency synaptic stimulation in the dentate gyrus of rabbits resulted in a long-lasting increase in synaptic strength. This form of synaptic plasticity, commonly referred to as long-term potentiation (LTP), was immediately considered as an attractive mechanism accounting for the ability of the brain to store information. In this historical piece looking back over the past 50 years, we discuss how these two landmark contributions directly motivated a colossal research effort and detail some of the resulting milestones that have shaped our evolving understanding of the molecular and cellular underpinnings of LTP. We highlight the main features of LTP, cover key experiments that defined its induction and expression mechanisms, and outline the evidence supporting a potential role of LTP in learning and memory. We also briefly explore some ramifications of LTP on network stability, consider current limitations of LTP as a model of associative memory, and entertain future research orientations.
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Affiliation(s)
- Léa Caya-Bissonnette
- Graduate Program in Neuroscience, University of Ottawa, 451 ch. Smyth Road (3501N), Ottawa, ON K1H 8M5, Canada; Brain and Mind Research Institute's Centre for Neural Dynamics and Artificial Intelligence, 451 ch. Smyth Road (3501N), Ottawa, ON K1H 8M5, Canada; Department of Cellular and Molecular Medicine, Faculty of Medicine, University of Ottawa, 451 ch. Smyth Road (3501N), Ottawa, ON K1H 8M5, Canada
| | - Jean-Claude Béïque
- Brain and Mind Research Institute's Centre for Neural Dynamics and Artificial Intelligence, 451 ch. Smyth Road (3501N), Ottawa, ON K1H 8M5, Canada; Department of Cellular and Molecular Medicine, Faculty of Medicine, University of Ottawa, 451 ch. Smyth Road (3501N), Ottawa, ON K1H 8M5, Canada.
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17
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O’Hare JK, Wang J, Shala MD, Polleux F, Losonczy A. Variable recruitment of distal tuft dendrites shapes new hippocampal place fields. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.02.26.582144. [PMID: 38464058 PMCID: PMC10925200 DOI: 10.1101/2024.02.26.582144] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 03/12/2024]
Abstract
Hippocampal pyramidal neurons support episodic memory by integrating complementary information streams into new 'place fields'. Distal tuft dendrites are widely thought to initiate place field formation by locally generating prolonged, globally-spreading Ca 2+ spikes known as plateau potentials. However, the hitherto experimental inaccessibility of distal tuft dendrites in the hippocampus has rendered their in vivo function entirely unknown. Here we gained direct optical access to this elusive dendritic compartment. We report that distal tuft dendrites do not serve as the point of origin for place field-forming plateau potentials. Instead, the timing and extent of peri-formation distal tuft recruitment is variable and closely predicts multiple properties of resultant place fields. Therefore, distal tuft dendrites play a more powerful role in hippocampal feature selectivity than simply initiating place field formation. Moreover, place field formation is not accompanied by global Ca 2+ influx as previously thought. In addition to shaping new somatic place fields, distal tuft dendrites possess their own local place fields. Tuft place fields are back-shifted relative to that of their soma and appear to maintain somatic place fields via post-formation plateau potentials. Through direct in vivo observation, we provide a revised dendritic basis for hippocampal feature selectivity during navigational learning.
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Affiliation(s)
- Justin K. O’Hare
- Department of Neuroscience, Columbia University; New York, NY, United States
- Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University; New York, NY, United States
| | - Jamie Wang
- Department of Biomedical Engineering, Duke University; Durham, NC, United States
| | - Margjele D. Shala
- Department of Neuroscience, Columbia University; New York, NY, United States
| | - Franck Polleux
- Department of Neuroscience, Columbia University; New York, NY, United States
- Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University; New York, NY, United States
| | - Attila Losonczy
- Department of Neuroscience, Columbia University; New York, NY, United States
- Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University; New York, NY, United States
- Lead contact
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18
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Seenivasan P, Basak R, Narayanan R. Cross-strata co-occurrence of ripples with theta-frequency oscillations in the hippocampus of foraging rats. J Physiol 2024; 602:2315-2341. [PMID: 38654581 PMCID: PMC7615956 DOI: 10.1113/jp284629] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/02/2023] [Accepted: 04/04/2024] [Indexed: 04/26/2024] Open
Abstract
Brain rhythms have been postulated to play central roles in animal cognition. A prominently reported dichotomy of hippocampal rhythms links theta-frequency oscillations (4-12 Hz) and ripples (120-250 Hz) exclusively to preparatory and consummatory behaviours, respectively. However, because of the differential power expression of these two signals across hippocampal strata, such exclusivity requires validation through analyses of simultaneous multi-strata recordings. We assessed co-occurrence of theta-frequency oscillations with ripples in multi-channel recordings of extracellular potentials across hippocampal strata from foraging rats. We detected all ripple events from an identified stratum pyramidale (SP) channel. We then defined theta epochs based on theta oscillations detected from the stratum lacunosum-moleculare (SLM) or the stratum radiatum (SR). We found ∼20% of ripple events (in SP) to co-occur with theta epochs identified from SR/SLM channels, defined here as theta ripples. Strikingly, when theta epochs were instead identified from the SP channel, such co-occurrences were significantly reduced because of a progressive reduction in theta power along the SLM-SR-SP axis. Behaviourally, we found most theta ripples to occur during immobile periods, with comparable theta power during exploratory and immobile theta epochs. Furthermore, the progressive reduction in theta power along the SLM-SR-SP axis was common to exploratory and immobile periods. Finally, we found a strong theta-phase preference of theta ripples within the fourth quadrant [3π/2 - 2π] of the associated theta oscillation. The prevalence of theta ripples expands the potential roles of ripple-frequency oscillations to span the continuum of encoding, retrieval and consolidation, achieved through interactions with theta oscillations. KEY POINTS: The brain manifests oscillations in recorded electrical potentials, with different frequencies of oscillation associated with distinct behavioural states. A prominently reported dichotomy assigns theta-frequency oscillations (4-12 Hz) and ripples (120-250 Hz) recorded in the hippocampus to be exclusively associated with preparatory and consummatory behaviours, respectively. Our multi-strata recordings from the rodent hippocampus coupled with cross-strata analyses provide direct quantitative evidence for the occurrence of ripple events nested within theta oscillations. These results highlight the need for an analysis pipeline that explicitly accounts for the specific strata where individual oscillatory power is high, in analysing simultaneously recorded data from multiple strata. Our observations open avenues for investigations involving cross-strata interactions between theta oscillations and ripples across different behavioural states.
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Affiliation(s)
- Pavithraa Seenivasan
- Cellular Neurophysiology Laboratory, Molecular Biophysics Unit, Indian Institute of Science, Bangalore, India
| | - Reshma Basak
- Cellular Neurophysiology Laboratory, Molecular Biophysics Unit, Indian Institute of Science, Bangalore, India
| | - Rishikesh Narayanan
- Cellular Neurophysiology Laboratory, Molecular Biophysics Unit, Indian Institute of Science, Bangalore, India
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19
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Galloni AR, Yuan Y, Zhu M, Yu H, Bisht RS, Wu CTM, Grienberger C, Ramanathan S, Milstein AD. Neuromorphic one-shot learning utilizing a phase-transition material. Proc Natl Acad Sci U S A 2024; 121:e2318362121. [PMID: 38630718 PMCID: PMC11047090 DOI: 10.1073/pnas.2318362121] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/20/2023] [Accepted: 03/25/2024] [Indexed: 04/19/2024] Open
Abstract
Design of hardware based on biological principles of neuronal computation and plasticity in the brain is a leading approach to realizing energy- and sample-efficient AI and learning machines. An important factor in selection of the hardware building blocks is the identification of candidate materials with physical properties suitable to emulate the large dynamic ranges and varied timescales of neuronal signaling. Previous work has shown that the all-or-none spiking behavior of neurons can be mimicked by threshold switches utilizing material phase transitions. Here, we demonstrate that devices based on a prototypical metal-insulator-transition material, vanadium dioxide (VO2), can be dynamically controlled to access a continuum of intermediate resistance states. Furthermore, the timescale of their intrinsic relaxation can be configured to match a range of biologically relevant timescales from milliseconds to seconds. We exploit these device properties to emulate three aspects of neuronal analog computation: fast (~1 ms) spiking in a neuronal soma compartment, slow (~100 ms) spiking in a dendritic compartment, and ultraslow (~1 s) biochemical signaling involved in temporal credit assignment for a recently discovered biological mechanism of one-shot learning. Simulations show that an artificial neural network using properties of VO2 devices to control an agent navigating a spatial environment can learn an efficient path to a reward in up to fourfold fewer trials than standard methods. The phase relaxations described in our study may be engineered in a variety of materials and can be controlled by thermal, electrical, or optical stimuli, suggesting further opportunities to emulate biological learning in neuromorphic hardware.
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Affiliation(s)
- Alessandro R. Galloni
- Department of Neuroscience and Cell Biology, Robert Wood Johnson Medical School, Rutgers, The State University of New Jersey, Piscataway, NJ08854
- Center for Advanced Biotechnology and Medicine, Rutgers, The State University of New Jersey, Piscataway, NJ08854
| | - Yifan Yuan
- Department of Electrical and Computer Engineering, Rutgers, The State University of New Jersey, Piscataway, NJ08854
| | - Minning Zhu
- Department of Electrical and Computer Engineering, Rutgers, The State University of New Jersey, Piscataway, NJ08854
| | - Haoming Yu
- School of Materials Engineering, Purdue University, West Lafayette, IN47907
| | - Ravindra S. Bisht
- Department of Electrical and Computer Engineering, Rutgers, The State University of New Jersey, Piscataway, NJ08854
| | - Chung-Tse Michael Wu
- Department of Electrical and Computer Engineering, Rutgers, The State University of New Jersey, Piscataway, NJ08854
| | - Christine Grienberger
- Department of Neuroscience, Brandeis University, Waltham, MA02453
- Department of Biology and Volen National Center for Complex Systems, Brandeis University, Waltham, MA02453
| | - Shriram Ramanathan
- Department of Electrical and Computer Engineering, Rutgers, The State University of New Jersey, Piscataway, NJ08854
| | - Aaron D. Milstein
- Department of Neuroscience and Cell Biology, Robert Wood Johnson Medical School, Rutgers, The State University of New Jersey, Piscataway, NJ08854
- Center for Advanced Biotechnology and Medicine, Rutgers, The State University of New Jersey, Piscataway, NJ08854
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20
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Zheng Z(S, Huszár R, Hainmueller T, Bartos M, Williams A, Buzsáki G. Perpetual step-like restructuring of hippocampal circuit dynamics. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.04.22.590576. [PMID: 38712105 PMCID: PMC11071370 DOI: 10.1101/2024.04.22.590576] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/08/2024]
Abstract
Representation of the environment by hippocampal populations is known to drift even within a familiar environment, which could reflect gradual changes in single cell activity or result from averaging across discrete switches of single neurons. Disambiguating these possibilities is crucial, as they each imply distinct mechanisms. Leveraging change point detection and model comparison, we found that CA1 population vectors decorrelated gradually within a session. In contrast, individual neurons exhibited predominantly step-like emergence and disappearance of place fields or sustained change in within-field firing. The changes were not restricted to particular parts of the maze or trials and did not require apparent behavioral changes. The same place fields emerged, disappeared, and reappeared across days, suggesting that the hippocampus reuses pre-existing assemblies, rather than forming new fields de novo. Our results suggest an internally-driven perpetual step-like reorganization of the neuronal assemblies.
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Affiliation(s)
| | - Roman Huszár
- Center for Neural Science, New York University, New York, NY, USA
- Neuroscience Institute, New York University, New York, NY, USA
| | - Thomas Hainmueller
- Department of Psychiatry, NYU Grossman School of Medicine, New York University, New York, NY, USA
| | - Marlene Bartos
- Institute for Physiology I, University of Freiburg, Medical Faculty, 79104 Freiburg, Germany
| | - Alex Williams
- Center for Neural Science, New York University, New York, NY, USA
- Neuroscience Institute, New York University, New York, NY, USA
- Center for Computational Neuroscience, Flatiron Institute
| | - György Buzsáki
- Neuroscience Institute, New York University, New York, NY, USA
- Department of Neurology, and New York University, New York, NY, USA
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21
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Chettih SN, Mackevicius EL, Hale S, Aronov D. Barcoding of episodic memories in the hippocampus of a food-caching bird. Cell 2024; 187:1922-1935.e20. [PMID: 38554707 PMCID: PMC11015962 DOI: 10.1016/j.cell.2024.02.032] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/18/2023] [Revised: 11/28/2023] [Accepted: 02/23/2024] [Indexed: 04/02/2024]
Abstract
The hippocampus is critical for episodic memory. Although hippocampal activity represents place and other behaviorally relevant variables, it is unclear how it encodes numerous memories of specific events in life. To study episodic coding, we leveraged the specialized behavior of chickadees-food-caching birds that form memories at well-defined moments in time whenever they cache food for subsequent retrieval. Our recordings during caching revealed very sparse, transient barcode-like patterns of firing across hippocampal neurons. Each "barcode" uniquely represented a caching event and transiently reactivated during the retrieval of that specific cache. Barcodes co-occurred with the conventional activity of place cells but were uncorrelated even for nearby cache locations that had similar place codes. We propose that animals recall episodic memories by reactivating hippocampal barcodes. Similarly to computer hash codes, these patterns assign unique identifiers to different events and could be a mechanism for rapid formation and storage of many non-interfering memories.
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Affiliation(s)
- Selmaan N Chettih
- Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY 10027, USA
| | - Emily L Mackevicius
- Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY 10027, USA; Basis Research Institute, New York, NY 10027, USA
| | - Stephanie Hale
- Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY 10027, USA
| | - Dmitriy Aronov
- Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY 10027, USA.
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22
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Zhang L, Chen Y, Fan Y, Shi L. Treadmill exercise pretreatment ameliorated structural synaptic plasticity impairments of medial prefrontal cortex in vascular dementia rat and improved recognition memory. Sci Rep 2024; 14:7116. [PMID: 38531892 PMCID: PMC10965903 DOI: 10.1038/s41598-024-57080-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/03/2023] [Accepted: 03/14/2024] [Indexed: 03/28/2024] Open
Abstract
This study aimed to investigate structural synaptic plasticity in the medial prefrontal cortex of rats under treadmill exercise pretreatment or naive conditions in a vascular dementia model, followed by recognition memory performance in a novel object recognition task. In this study, 24 Sprague-Dawley rats were obtained and randomly assigned into 4 groups as follows: control group (Con group, n = 6), vascular dementia (VD group, n = 6), exercise and vascular dementia group (Exe + VD group, n = 6), and exercise group (Exe group, n = 6). Initially, 4 weeks of treadmill exercise intervention was administered to the rats in the Exe + VD and Exe groups. Then, to establish the vascular dementia model, the rats both in the VD and Exe + VD groups were subjected to bilateral common carotids arteries surgery. One week later, open-field task and novel recognition memory task were adopted to evaluate anxiety-like behavior and recognition memory in each group. Then, immunofluorescence and Golgi staining were used to evaluate neuronal number and spine density in the rat medial prefrontal cortex. Transmission electron microscopy was used to observe the synaptic ultrastructure. Finally, microdialysis coupled with high-performance liquid chromatography was used to assess the levels of 5-HT and dopamine in the medial prefrontal cortex. The behavior results showed that 4 weeks of treadmill exercise pretreatment significantly alleviated recognition memory impairment and anxiety-like behavior in VD rats (P < 0.01), while the rats in VD group exhibited impaired recognition memory and anxiety-like behavior when compared with the Con group (P < 0.001). Additionally, NeuN immunostaining results revealed a significant decrease of NeuN-marked neuron in the VD group compared to Con group (P < 0.01), but a significantly increase in this molecular marker was found in the Exe + VD group compared to the Con group (P < 0.01). Golgi staining results showed that the medial prefrontal cortex neurons in the VD group displayed fewer dendritic spines than those in the Con group (P < 0.01), and there were more spines on the dendrites of medial prefrontal cortex cells in Exe + VD rats than in VD rats (P < 0.01). Transmission electron microscopy further revealed that there was a significant reduction of synapses intensity in the medial prefrontal cortex of rats in the VD group when compared with the Con group(P < 0.01), but physical exercise was found to significantly increased synapses intensity in the VD model (P < 0.01). Lastly, the levels of dopamine and 5-HT in the medial prefrontal cortex of rats in the VD group was significantly lower compared to the Con group (P < 0.01), and treadmill exercise was shown to significantly increased the levels of dopamine and 5-HT in the VD rats (P < 0.05). Treadmill exercise pretreatment ameliorated structural synaptic plasticity impairments of medial prefrontal cortex in VD rat and improved recognition memory.
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Affiliation(s)
- Linlin Zhang
- Department of Physical Education, Henan Normal University, Xinxiang, 453007, China
| | - Yuanyuan Chen
- Department of Psychology and Education, Shantou Polytechnic, Shantou, 515071, China
| | - Yongzhao Fan
- Department of Physical Education, Henan Normal University, Xinxiang, 453007, China
| | - Lin Shi
- Department of Physical Education and Sport, Shanghai Ocean University, Shanghai, 201306, China.
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23
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Calvin OL, Erickson MT, Walters CJ, Redish AD. Dorsal hippocampus represents locations to avoid as well as locations to approach during approach-avoidance conflict. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.03.10.584295. [PMID: 38559154 PMCID: PMC10979882 DOI: 10.1101/2024.03.10.584295] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 04/04/2024]
Abstract
Worrying about perceived threats is a hallmark of multiple psychological disorders including anxiety. This concern about future events is particularly important when an individual is faced with an approach-avoidance conflict. Potential goals to approach are known to be represented in the dorsal hippocampus during theta sweeps. Similarly, important non-local information is represented during hippocampal high synchrony events (HSEs), which are correlated with sharp-wave ripples (SWRs). It is likely that potential future threats may be similarly represented. We examined how threats and rewards were represented within the hippocampus during approach-avoidance conflicts in rats faced with a predator-like robot guarding a food reward. We found representations of the pseudo-predator during HSEs when hesitating in the nest, and during theta prior to retreating as the rats approached the pseudo-predator. After the first attack, we observed new place fields appearing at the location of the robot (not the location the rat was when attacked). The anxiolytic diazepam reduced anxiety-like behavior and altered hippocampal local field potentials, including reducing SWRs, suggesting that one potential mechanism of diazepam's actions may be through altered representations of imagined threat. These results suggest that hippocampal representation of potential threats could be an important mechanism that underlies worry and a potential target for anxiolytics.
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Affiliation(s)
- Olivia L. Calvin
- Department of Neuroscience, University of Minnesota, Minneapolis MN 55455
| | | | | | - A. David Redish
- Department of Neuroscience, University of Minnesota, Minneapolis MN 55455
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24
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Rvachev MM. An operating principle of the cerebral cortex, and a cellular mechanism for attentional trial-and-error pattern learning and useful classification extraction. Front Neural Circuits 2024; 18:1280604. [PMID: 38505865 PMCID: PMC10950307 DOI: 10.3389/fncir.2024.1280604] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/20/2023] [Accepted: 02/13/2024] [Indexed: 03/21/2024] Open
Abstract
A feature of the brains of intelligent animals is the ability to learn to respond to an ensemble of active neuronal inputs with a behaviorally appropriate ensemble of active neuronal outputs. Previously, a hypothesis was proposed on how this mechanism is implemented at the cellular level within the neocortical pyramidal neuron: the apical tuft or perisomatic inputs initiate "guess" neuron firings, while the basal dendrites identify input patterns based on excited synaptic clusters, with the cluster excitation strength adjusted based on reward feedback. This simple mechanism allows neurons to learn to classify their inputs in a surprisingly intelligent manner. Here, we revise and extend this hypothesis. We modify synaptic plasticity rules to align with behavioral time scale synaptic plasticity (BTSP) observed in hippocampal area CA1, making the framework more biophysically and behaviorally plausible. The neurons for the guess firings are selected in a voluntary manner via feedback connections to apical tufts in the neocortical layer 1, leading to dendritic Ca2+ spikes with burst firing, which are postulated to be neural correlates of attentional, aware processing. Once learned, the neuronal input classification is executed without voluntary or conscious control, enabling hierarchical incremental learning of classifications that is effective in our inherently classifiable world. In addition to voluntary, we propose that pyramidal neuron burst firing can be involuntary, also initiated via apical tuft inputs, drawing attention toward important cues such as novelty and noxious stimuli. We classify the excitations of neocortical pyramidal neurons into four categories based on their excitation pathway: attentional versus automatic and voluntary/acquired versus involuntary. Additionally, we hypothesize that dendrites within pyramidal neuron minicolumn bundles are coupled via depolarization cross-induction, enabling minicolumn functions such as the creation of powerful hierarchical "hyperneurons" and the internal representation of the external world. We suggest building blocks to extend the microcircuit theory to network-level processing, which, interestingly, yields variants resembling the artificial neural networks currently in use. On a more speculative note, we conjecture that principles of intelligence in universes governed by certain types of physical laws might resemble ours.
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25
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Dudok B, Fan LZ, Farrell JS, Malhotra S, Homidan J, Kim DK, Wenardy C, Ramakrishnan C, Li Y, Deisseroth K, Soltesz I. Retrograde endocannabinoid signaling at inhibitory synapses in vivo. Science 2024; 383:967-970. [PMID: 38422134 PMCID: PMC10921710 DOI: 10.1126/science.adk3863] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/18/2023] [Accepted: 01/24/2024] [Indexed: 03/02/2024]
Abstract
Endocannabinoid (eCB)-mediated suppression of inhibitory synapses has been hypothesized, but this has not yet been demonstrated to occur in vivo because of the difficulty in tracking eCB dynamics and synaptic plasticity during behavior. In mice navigating a linear track, we observed location-specific eCB signaling in hippocampal CA1 place cells, and this was detected both in the postsynaptic membrane and the presynaptic inhibitory axons. All-optical in vivo investigation of synaptic responses revealed that postsynaptic depolarization was followed by a suppression of inhibitory synaptic potentials. Furthermore, interneuron-specific cannabinoid receptor deletion altered place cell tuning. Therefore, rapid, postsynaptic, activity-dependent eCB signaling modulates inhibitory synapses on a timescale of seconds during behavior.
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Affiliation(s)
- Barna Dudok
- Departments of Neurology and Neuroscience, Baylor College of Medicine; Houston, TX, 77030, USA
- Department of Neurosurgery, Stanford University; Stanford, CA, 94305, USA
| | - Linlin Z. Fan
- Department of Bioengineering, Stanford University; Stanford, CA, 94305, USA
| | - Jordan S. Farrell
- Department of Neurosurgery, Stanford University; Stanford, CA, 94305, USA
- F.M. Kirby Neurobiology Center and Rosamund Stone Zander Translational Neuroscience Center, Boston Children’s Hospital; Boston, MA, 02115, USA
- Department of Neurology, Boston Children’s Hospital, Harvard Medical School; Boston, MA, 02115, USA
| | - Shreya Malhotra
- Department of Neurosurgery, Stanford University; Stanford, CA, 94305, USA
| | - Jesslyn Homidan
- Department of Neurosurgery, Stanford University; Stanford, CA, 94305, USA
| | - Doo Kyung Kim
- Department of Bioengineering, Stanford University; Stanford, CA, 94305, USA
| | - Celestine Wenardy
- Department of Bioengineering, Stanford University; Stanford, CA, 94305, USA
| | - Charu Ramakrishnan
- Cracking the Neural Code (CNC) Program, Stanford University; Stanford, CA, 94305, USA
| | - Yulong Li
- State Key Laboratory of Membrane Biology, School of Life Sciences, Peking University; Beijing, 100871, China
| | - Karl Deisseroth
- Department of Bioengineering, Stanford University; Stanford, CA, 94305, USA
- Department of Psychiatry and Behavioral Sciences, Stanford University; Stanford, CA, 94305, USA
- Howard Hughes Medical Institute; Stanford, CA, 94305, USA
| | - Ivan Soltesz
- Department of Neurosurgery, Stanford University; Stanford, CA, 94305, USA
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26
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Li G, McLaughlin DW, Peskin CS. A biochemical description of postsynaptic plasticity-with timescales ranging from milliseconds to seconds. Proc Natl Acad Sci U S A 2024; 121:e2311709121. [PMID: 38324573 PMCID: PMC10873618 DOI: 10.1073/pnas.2311709121] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/10/2023] [Accepted: 12/29/2023] [Indexed: 02/09/2024] Open
Abstract
Synaptic plasticity [long-term potentiation/depression (LTP/D)], is a cellular mechanism underlying learning. Two distinct types of early LTP/D (E-LTP/D), acting on very different time scales, have been observed experimentally-spike timing dependent plasticity (STDP), on time scales of tens of ms; and behavioral time scale synaptic plasticity (BTSP), on time scales of seconds. BTSP is a candidate for a mechanism underlying rapid learning of spatial location by place cells. Here, a computational model of the induction of E-LTP/D at a spine head of a synapse of a hippocampal pyramidal neuron is developed. The single-compartment model represents two interacting biochemical pathways for the activation (phosphorylation) of the kinase (CaMKII) with a phosphatase, with ion inflow through channels (NMDAR, CaV1,Na). The biochemical reactions are represented by a deterministic system of differential equations, with a detailed description of the activation of CaMKII that includes the opening of the compact state of CaMKII. This single model captures realistic responses (temporal profiles with the differing timescales) of STDP and BTSP and their asymmetries. The simulations distinguish several mechanisms underlying STDP vs. BTSP, including i) the flow of [Formula: see text] through NMDAR vs. CaV1 channels, and ii) the origin of several time scales in the activation of CaMKII. The model also realizes a priming mechanism for E-LTP that is induced by [Formula: see text] flow through CaV1.3 channels. Once in the spine head, this small additional [Formula: see text] opens the compact state of CaMKII, placing CaMKII ready for subsequent induction of LTP.
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Affiliation(s)
- Guanchun Li
- Courant Institute and Center for Neural Science, Department of Mathematics, New York University, New York, NY10012
| | - David W. McLaughlin
- Courant Institute and Center for Neural Science, Department of Mathematics, New York University, New York, NY10012
- Center for Neural Science, Department of Neural Science, New York University, New York, NY10012
- Institute of Mathematical Science, Mathematics Department, New York University-Shanghai, Shanghai200122, China
- Neuroscience Institute of New York University Langone Health, New York University, New York, NY10016
| | - Charles S. Peskin
- Courant Institute and Center for Neural Science, Department of Mathematics, New York University, New York, NY10012
- Center for Neural Science, Department of Neural Science, New York University, New York, NY10012
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27
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Cone I, Clopath C. Latent representations in hippocampal network model co-evolve with behavioral exploration of task structure. Nat Commun 2024; 15:687. [PMID: 38263408 PMCID: PMC10806076 DOI: 10.1038/s41467-024-44871-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/02/2023] [Accepted: 01/03/2024] [Indexed: 01/25/2024] Open
Abstract
To successfully learn real-life behavioral tasks, animals must pair actions or decisions to the task's complex structure, which can depend on abstract combinations of sensory stimuli and internal logic. The hippocampus is known to develop representations of this complex structure, forming a so-called "cognitive map". However, the precise biophysical mechanisms driving the emergence of task-relevant maps at the population level remain unclear. We propose a model in which plateau-based learning at the single cell level, combined with reinforcement learning in an agent, leads to latent representational structures codependently evolving with behavior in a task-specific manner. In agreement with recent experimental data, we show that the model successfully develops latent structures essential for task-solving (cue-dependent "splitters") while excluding irrelevant ones. Finally, our model makes testable predictions concerning the co-dependent interactions between split representations and split behavioral policy during their evolution.
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Affiliation(s)
- Ian Cone
- Department of Bioengineering, Imperial College London, London, UK.
| | - Claudia Clopath
- Department of Bioengineering, Imperial College London, London, UK
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28
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Bowler JC, Losonczy A. Direct cortical inputs to hippocampal area CA1 transmit complementary signals for goal-directed navigation. Neuron 2023; 111:4071-4085.e6. [PMID: 37816349 PMCID: PMC11490304 DOI: 10.1016/j.neuron.2023.09.013] [Citation(s) in RCA: 16] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2023] [Revised: 07/14/2023] [Accepted: 09/13/2023] [Indexed: 10/12/2023]
Abstract
The subregions of the entorhinal cortex (EC) are conventionally thought to compute dichotomous representations for spatial processing, with the medial EC (MEC) providing a global spatial map and the lateral EC (LEC) encoding specific sensory details of experience. Yet, little is known about the specific types of information EC transmits downstream to the hippocampus. Here, we exploit in vivo sub-cellular imaging to record from EC axons in CA1 while mice perform navigational tasks in virtual reality (VR). We uncover distinct yet overlapping representations of task, location, and context in both MEC and LEC axons. MEC transmitted highly location- and context-specific codes; LEC inputs were biased by ongoing navigational goals. However, during tasks with reliable reward locations, the animals' position could be accurately decoded from either subregion. Our results revise the prevailing dogma about EC information processing, revealing novel ways spatial and non-spatial information is routed and combined upstream of the hippocampus.
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Affiliation(s)
- John C Bowler
- Department of Neuroscience, Columbia University, New York, NY 10027, USA; Doctoral Program in Neurobiology and Behavior, Columbia University, New York, NY 10027, USA.
| | - Attila Losonczy
- Department of Neuroscience, Columbia University, New York, NY 10027, USA; Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY 10027, USA.
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29
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Friedenberger Z, Harkin E, Tóth K, Naud R. Silences, spikes and bursts: Three-part knot of the neural code. J Physiol 2023; 601:5165-5193. [PMID: 37889516 DOI: 10.1113/jp281510] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/13/2023] [Accepted: 09/28/2023] [Indexed: 10/28/2023] Open
Abstract
When a neuron breaks silence, it can emit action potentials in a number of patterns. Some responses are so sudden and intense that electrophysiologists felt the need to single them out, labelling action potentials emitted at a particularly high frequency with a metonym - bursts. Is there more to bursts than a figure of speech? After all, sudden bouts of high-frequency firing are expected to occur whenever inputs surge. The burst coding hypothesis advances that the neural code has three syllables: silences, spikes and bursts. We review evidence supporting this ternary code in terms of devoted mechanisms for burst generation, synaptic transmission and synaptic plasticity. We also review the learning and attention theories for which such a triad is beneficial.
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Affiliation(s)
- Zachary Friedenberger
- Brain and Mind Institute, Department of Cellular and Molecular Medicine, University of Ottawa, Ottawa, Ontario, Canada
- Centre for Neural Dynamics and Artifical Intelligence, Department of Physics, University of Ottawa, Ottawa, Ontario, Ottawa
| | - Emerson Harkin
- Brain and Mind Institute, Department of Cellular and Molecular Medicine, University of Ottawa, Ottawa, Ontario, Canada
| | - Katalin Tóth
- Brain and Mind Institute, Department of Cellular and Molecular Medicine, University of Ottawa, Ottawa, Ontario, Canada
| | - Richard Naud
- Brain and Mind Institute, Department of Cellular and Molecular Medicine, University of Ottawa, Ottawa, Ontario, Canada
- Centre for Neural Dynamics and Artifical Intelligence, Department of Physics, University of Ottawa, Ottawa, Ontario, Ottawa
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30
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Levy ERJ, Carrillo-Segura S, Park EH, Redman WT, Hurtado JR, Chung S, Fenton AA. A manifold neural population code for space in hippocampal coactivity dynamics independent of place fields. Cell Rep 2023; 42:113142. [PMID: 37742193 PMCID: PMC10842170 DOI: 10.1016/j.celrep.2023.113142] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/27/2021] [Revised: 06/14/2023] [Accepted: 08/30/2023] [Indexed: 09/26/2023] Open
Abstract
Hippocampus place cell discharge is temporally unreliable across seconds and days, and place fields are multimodal, suggesting an "ensemble cofiring" spatial coding hypothesis with manifold dynamics that does not require reliable spatial tuning, in contrast to hypotheses based on place field (spatial tuning) stability. We imaged mouse CA1 (cornu ammonis 1) ensembles in two environments across three weeks to evaluate these coding hypotheses. While place fields "remap," being more distinct between than within environments, coactivity relationships generally change less. Decoding location and environment from 1-s ensemble location-specific activity is effective and improves with experience. Decoding environment from cell-pair coactivity relationships is also effective and improves with experience, even after removing place tuning. Discriminating environments from 1-s ensemble coactivity relies crucially on the cells with the most anti-coactive cell-pair relationships because activity is internally organized on a low-dimensional manifold of non-linear coactivity relationships that intermittently reregisters to environments according to the anti-cofiring subpopulation activity.
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Affiliation(s)
| | - Simón Carrillo-Segura
- Center for Neural Science, New York University, New York, NY 10003, USA; Graduate Program in Mechanical and Aerospace Engineering, Tandon School of Engineering, New York University, Brooklyn, NY 11201, USA
| | - Eun Hye Park
- Center for Neural Science, New York University, New York, NY 10003, USA
| | - William Thomas Redman
- Interdepartmental Graduate Program in Dynamical Neuroscience, University of California, Santa Barbara, Santa Barbara, CA 93106, USA
| | | | - SueYeon Chung
- Center for Neural Science, New York University, New York, NY 10003, USA; Flatiron Institute Center for Computational Neuroscience, New York, NY 10010, USA
| | - André Antonio Fenton
- Center for Neural Science, New York University, New York, NY 10003, USA; Neuroscience Institute at the NYU Langone Medical Center, New York, NY 10016, USA.
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31
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Ratigan HC, Krishnan S, Smith S, Sheffield MEJ. A thalamic-hippocampal CA1 signal for contextual fear memory suppression, extinction, and discrimination. Nat Commun 2023; 14:6758. [PMID: 37875465 PMCID: PMC10598272 DOI: 10.1038/s41467-023-42429-6] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/23/2023] [Accepted: 10/10/2023] [Indexed: 10/26/2023] Open
Abstract
The adaptive regulation of fear memories is a crucial neural function that prevents inappropriate fear expression. Fear memories can be acquired through contextual fear conditioning (CFC) which relies on the hippocampus. The thalamic nucleus reuniens (NR) is necessary to extinguish contextual fear and innervates hippocampal CA1. However, the role of the NR-CA1 pathway in contextual fear is unknown. We developed a head-restrained virtual reality CFC paradigm, and demonstrate that mice can acquire and extinguish context-dependent fear responses. We found that inhibiting the NR-CA1 pathway following CFC lengthens the duration of fearful freezing epochs, increases fear generalization, and delays fear extinction. Using in vivo imaging, we recorded NR-axons innervating CA1 and found that NR-axons become tuned to fearful freezing following CFC. We conclude that the NR-CA1 pathway actively suppresses fear by disrupting contextual fear memory retrieval in CA1 during fearful freezing behavior, a process that also reduces fear generalization and accelerates extinction.
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Affiliation(s)
- Heather C Ratigan
- Department of Neurobiology, University of Chicago, Chicago, IL, 60615, USA
- Doctoral Program in Neurobiology, University of Chicago, Chicago, IL, 60615, USA
- Neuroscience Institute, University of Chicago, Chicago, IL, 60615, USA
| | - Seetha Krishnan
- Department of Neurobiology, University of Chicago, Chicago, IL, 60615, USA
- Neuroscience Institute, University of Chicago, Chicago, IL, 60615, USA
| | - Shai Smith
- Department of Neurobiology, University of Chicago, Chicago, IL, 60615, USA
- Undergraduate Program in Neuroscience, University of Chicago, Chicago, IL, 60615, USA
| | - Mark E J Sheffield
- Department of Neurobiology, University of Chicago, Chicago, IL, 60615, USA.
- Doctoral Program in Neurobiology, University of Chicago, Chicago, IL, 60615, USA.
- Neuroscience Institute, University of Chicago, Chicago, IL, 60615, USA.
- Undergraduate Program in Neuroscience, University of Chicago, Chicago, IL, 60615, USA.
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32
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Madar A, Dong C, Sheffield M. BTSP, not STDP, Drives Shifts in Hippocampal Representations During Familiarization. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2023:2023.10.17.562791. [PMID: 37904999 PMCID: PMC10614909 DOI: 10.1101/2023.10.17.562791] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/02/2023]
Abstract
Synaptic plasticity is widely thought to support memory storage in the brain, but the rules determining impactful synaptic changes in-vivo are not known. We considered the trial-by-trial shifting dynamics of hippocampal place fields (PFs) as an indicator of ongoing plasticity during memory formation. By implementing different plasticity rules in computational models of spiking place cells and comparing to experimentally measured PFs from mice navigating familiar and novel environments, we found that Behavioral-Timescale-Synaptic-Plasticity (BTSP), rather than Hebbian Spike-Timing-Dependent-Plasticity, is the principal mechanism governing PF shifting dynamics. BTSP-triggering events are rare, but more frequent during novel experiences. During exploration, their probability is dynamic: it decays after PF onset, but continually drives a population-level representational drift. Finally, our results show that BTSP occurs in CA3 but is less frequent and phenomenologically different than in CA1. Overall, our study provides a new framework to understand how synaptic plasticity shapes neuronal representations during learning.
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Affiliation(s)
- A.D. Madar
- Department of Neurobiology, Neuroscience Institute, University of Chicago
| | - C. Dong
- Department of Neurobiology, Neuroscience Institute, University of Chicago
- current affiliation: Department of Neurobiology, Stanford University School of Medicine
| | - M.E.J. Sheffield
- Department of Neurobiology, Neuroscience Institute, University of Chicago
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33
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O'Donnell C. Nonlinear slow-timescale mechanisms in synaptic plasticity. Curr Opin Neurobiol 2023; 82:102778. [PMID: 37657186 DOI: 10.1016/j.conb.2023.102778] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2023] [Revised: 08/07/2023] [Accepted: 08/09/2023] [Indexed: 09/03/2023]
Abstract
Learning and memory rely on synapses changing their strengths in response to neural activity. However, there is a substantial gap between the timescales of neural electrical dynamics (1-100 ms) and organism behaviour during learning (seconds-minutes). What mechanisms bridge this timescale gap? What are the implications for theories of brain learning? Here I first cover experimental evidence for slow-timescale factors in plasticity induction. Then I review possible underlying cellular and synaptic mechanisms, and insights from recent computational models that incorporate such slow-timescale variables. I conclude that future progress in understanding brain learning across timescales will require both experimental and computational modelling studies that map out the nonlinearities implemented by both fast and slow plasticity mechanisms at synapses, and crucially, their joint interactions.
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Affiliation(s)
- Cian O'Donnell
- School of Computing, Engineering, and Intelligent Systems, Magee Campus, Ulster University, Derry/Londonderry, UK; School of Computer Science, Electrical and Electronic Engineering, and Engineering Maths, University of Bristol, Bristol, UK.
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34
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Nicoll RA, Schulman H. Synaptic memory and CaMKII. Physiol Rev 2023; 103:2877-2925. [PMID: 37290118 PMCID: PMC10642921 DOI: 10.1152/physrev.00034.2022] [Citation(s) in RCA: 22] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/20/2022] [Revised: 04/26/2023] [Accepted: 04/30/2023] [Indexed: 06/10/2023] Open
Abstract
Ca2+/calmodulin-dependent protein kinase II (CaMKII) and long-term potentiation (LTP) were discovered within a decade of each other and have been inextricably intertwined ever since. However, like many marriages, it has had its up and downs. Based on the unique biochemical properties of CaMKII, it was proposed as a memory molecule before any physiological linkage was made to LTP. However, as reviewed here, the convincing linkage of CaMKII to synaptic physiology and behavior took many decades. New technologies were critical in this journey, including in vitro brain slices, mouse genetics, single-cell molecular genetics, pharmacological reagents, protein structure, and two-photon microscopy, as were new investigators attracted by the exciting challenge. This review tracks this journey and assesses the state of this marriage 40 years on. The collective literature impels us to propose a relatively simple model for synaptic memory involving the following steps that drive the process: 1) Ca2+ entry through N-methyl-d-aspartate (NMDA) receptors activates CaMKII. 2) CaMKII undergoes autophosphorylation resulting in constitutive, Ca2+-independent activity and exposure of a binding site for the NMDA receptor subunit GluN2B. 3) Active CaMKII translocates to the postsynaptic density (PSD) and binds to the cytoplasmic C-tail of GluN2B. 4) The CaMKII-GluN2B complex initiates a structural rearrangement of the PSD that may involve liquid-liquid phase separation. 5) This rearrangement involves the PSD-95 scaffolding protein, α-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid receptors (AMPARs), and their transmembrane AMPAR-regulatory protein (TARP) auxiliary subunits, resulting in an accumulation of AMPARs in the PSD that underlies synaptic potentiation. 6) The stability of the modified PSD is maintained by the stability of the CaMKII-GluN2B complex. 7) By a process of subunit exchange or interholoenzyme phosphorylation CaMKII maintains synaptic potentiation in the face of CaMKII protein turnover. There are many other important proteins that participate in enlargement of the synaptic spine or modulation of the steps that drive and maintain the potentiation. In this review we critically discuss the data underlying each of the steps. As will become clear, some of these steps are more firmly grounded than others, and we provide suggestions as to how the evidence supporting these steps can be strengthened or, based on the new data, be replaced. Although the journey has been a long one, the prospect of having a detailed cellular and molecular understanding of learning and memory is at hand.
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Affiliation(s)
- Roger A Nicoll
- Department of Cellular and Molecular Pharmacology, University of California at San Francisco, San Francisco, California, United States
| | - Howard Schulman
- Department of Neurobiology, Stanford University School of Medicine, Stanford, California, United States
- Panorama Research Institute, Sunnyvale, California, United States
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35
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Sharif NA. Electrical, Electromagnetic, Ultrasound Wave Therapies, and Electronic Implants for Neuronal Rejuvenation, Neuroprotection, Axonal Regeneration, and IOP Reduction. J Ocul Pharmacol Ther 2023; 39:477-498. [PMID: 36126293 DOI: 10.1089/jop.2022.0046] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
The peripheral nervous system (PNS) of mammals and nervous systems of lower organisms possess significant regenerative potential. In contrast, although neural plasticity can provide some compensation, the central nervous system (CNS) neurons and nerves of adult mammals generally fail to regenerate after an injury or damage. However, use of diverse electrical, electromagnetic and sonographic energy waves are illuminating novel ways to stimulate neuronal differentiation, proliferation, neurite growth, and axonal elongation/regeneration leading to various levels of functional recovery in animals and humans afflicted with disorders of the CNS, PNS, retina, and optic nerve. Tools such as acupuncture, electroacupuncture, electroshock therapy, electrical stimulation, transcranial magnetic stimulation, red light therapy, and low-intensity pulsed ultrasound therapy are demonstrating efficacy in treating many different maladies. These include wound healing, partial recovery from motor dysfunctions, recovery from ischemic/reperfusion insults and CNS and ocular remyelination, retinal ganglion cell (RGC) rejuvenation, and RGC axonal regeneration. Neural rejuvenation and axonal growth/regeneration processes involve activation or intensifying of the intrinsic bioelectric waves (action potentials) that exist in every neuronal circuit of the body. In addition, reparative factors released at the nerve terminals and via neuronal dendrites (transmitter substances), extracellular vesicles containing microRNAs and neurotrophins, and intercellular communication occurring via nanotubes aid in reestablishing lost or damaged connections between the traumatized tissues and the PNS and CNS. Many other beneficial effects of the aforementioned treatment paradigms are mediated via gene expression alterations such as downregulation of inflammatory and death-signal genes and upregulation of neuroprotective and cytoprotective genes. These varied techniques and technologies will be described and discussed covering cell-based and animal model-based studies. Data from clinical applications and linkage to human ocular diseases will also be discussed where relevant translational research has been reported.
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Affiliation(s)
- Najam A Sharif
- Global Alliances and External Research, Ophthalmology Innovation Center, Santen Inc., Emeryville, California, USA
- Singapore Eye Research Institute (SERI), Singapore
- SingHealth Duke-NUS Ophthalmology and Visual Sciences Academic Clinical Programme, Duke-National University of Singapore Medical School, Singapore
- Department of Surgery and Cancer, Imperial College of Science and Technology, London, United Kingdom
- Department of Pharmaceutical Sciences, College of Pharmacy and Health Sciences, Texas Southern University, Houston, Texas, USA
- Department of Pharmacology and Neuroscience, University of North Texas Health Sciences Center, Fort Worth, Texas, USA
- Department of Pharmacy Sciences, Creighton University, Omaha, Nebraska, USA
- Insitute of Ophthalmology, University College London (UCL), London, United Kingdom
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36
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Xiao K, Li Y, Chitwood RA, Magee JC. A critical role for CaMKII in behavioral timescale synaptic plasticity in hippocampal CA1 pyramidal neurons. SCIENCE ADVANCES 2023; 9:eadi3088. [PMID: 37672577 PMCID: PMC10482326 DOI: 10.1126/sciadv.adi3088] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/17/2023] [Accepted: 08/03/2023] [Indexed: 09/08/2023]
Abstract
Behavioral timescale synaptic plasticity (BTSP) is a type of non-Hebbian synaptic plasticity reported to underlie place field formation. Despite this important function, the molecular mechanisms underlying BTSP are poorly understood. The α-calcium-calmodulin-dependent protein kinase II (αCaMKII) is activated by synaptic transmission-mediated calcium influx, and its subsequent phosphorylation is central to synaptic plasticity. Because the activity of αCaMKII is known to outlast the event triggering phosphorylation, we hypothesized that it could mediate the extended timescale of BTSP. To examine the role of αCaMKII in BTSP, we performed whole-cell in vivo and in vitro recordings in CA1 pyramidal neurons from mice engineered with a point mutation at the autophosphorylation site (T286A) causing accelerated signaling kinetics. Here, we demonstrate a profound deficit in synaptic plasticity, strongly suggesting that αCaMKII signaling is required for BTSP. This study elucidates part of the molecular mechanism of BTSP and provides insight into the function of αCaMKII in place cell formation and ultimately learning and memory.
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Affiliation(s)
- Kuo Xiao
- Department of Neuroscience, Baylor College of Medicine, Houston, TX, USA
| | - Yiding Li
- Department of Neuroscience, Baylor College of Medicine, Houston, TX, USA
- Howard Hughes Medical Institute, Baylor College of Medicine, Houston, TX, USA
| | - Raymond A. Chitwood
- Department of Neuroscience, Baylor College of Medicine, Houston, TX, USA
- Howard Hughes Medical Institute, Baylor College of Medicine, Houston, TX, USA
| | - Jeffrey C. Magee
- Department of Neuroscience, Baylor College of Medicine, Houston, TX, USA
- Howard Hughes Medical Institute, Baylor College of Medicine, Houston, TX, USA
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37
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Milstein AD, Tran S, Ng G, Soltesz I. Offline memory replay in recurrent neuronal networks emerges from constraints on online dynamics. J Physiol 2023; 601:3241-3264. [PMID: 35907087 PMCID: PMC9885000 DOI: 10.1113/jp283216] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/13/2022] [Accepted: 07/22/2022] [Indexed: 02/01/2023] Open
Abstract
During spatial exploration, neural circuits in the hippocampus store memories of sequences of sensory events encountered in the environment. When sensory information is absent during 'offline' resting periods, brief neuronal population bursts can 'replay' sequences of activity that resemble bouts of sensory experience. These sequences can occur in either forward or reverse order, and can even include spatial trajectories that have not been experienced, but are consistent with the topology of the environment. The neural circuit mechanisms underlying this variable and flexible sequence generation are unknown. Here we demonstrate in a recurrent spiking network model of hippocampal area CA3 that experimental constraints on network dynamics such as population sparsity, stimulus selectivity, rhythmicity and spike rate adaptation, as well as associative synaptic connectivity, enable additional emergent properties, including variable offline memory replay. In an online stimulus-driven state, we observed the emergence of neuronal sequences that swept from representations of past to future stimuli on the timescale of the theta rhythm. In an offline state driven only by noise, the network generated both forward and reverse neuronal sequences, and recapitulated the experimental observation that offline memory replay events tend to include salient locations like the site of a reward. These results demonstrate that biological constraints on the dynamics of recurrent neural circuits are sufficient to enable memories of sensory events stored in the strengths of synaptic connections to be flexibly read out during rest and sleep, which is thought to be important for memory consolidation and planning of future behaviour. KEY POINTS: A recurrent spiking network model of hippocampal area CA3 was optimized to recapitulate experimentally observed network dynamics during simulated spatial exploration. During simulated offline rest, the network exhibited the emergent property of generating flexible forward, reverse and mixed direction memory replay events. Network perturbations and analysis of model diversity and degeneracy identified associative synaptic connectivity and key features of network dynamics as important for offline sequence generation. Network simulations demonstrate that population over-representation of salient positions like the site of reward results in biased memory replay.
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Affiliation(s)
- Aaron D. Milstein
- Department of Neurosurgery, Stanford University School of Medicine, Stanford CA
- Department of Neuroscience and Cell Biology, Robert Wood Johnson Medical School and Center for Advanced Biotechnology and Medicine, Rutgers University, Piscataway, NJ
| | - Sarah Tran
- Department of Neurosurgery, Stanford University School of Medicine, Stanford CA
| | - Grace Ng
- Department of Neurosurgery, Stanford University School of Medicine, Stanford CA
| | - Ivan Soltesz
- Department of Neurosurgery, Stanford University School of Medicine, Stanford CA
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38
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Hadjiabadi D, Soltesz I. From single-neuron dynamics to higher-order circuit motifs in control and pathological brain networks. J Physiol 2023; 601:3011-3024. [PMID: 35815823 PMCID: PMC10655857 DOI: 10.1113/jp282749] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/15/2022] [Accepted: 06/27/2022] [Indexed: 11/08/2022] Open
Abstract
The convergence of advanced single-cell in vivo functional imaging techniques, computational modelling tools and graph-based network analytics has heralded new opportunities to study single-cell dynamics across large-scale networks, providing novel insights into principles of brain communication and pointing towards potential new strategies for treating neurological disorders. A major recent finding has been the identification of unusually richly connected hub cells that have capacity to synchronize networks and may also be critical in network dysfunction. While hub neurons are traditionally defined by measures that consider solely the number and strength of connections, novel higher-order graph analytics now enables the mining of massive networks for repeating subgraph patterns called motifs. As an illustration of the power offered by higher-order analysis of neuronal networks, we highlight how recent methodological advances uncovered a new functional cell type, the superhub, that is predicted to play a major role in regulating network dynamics. Finally, we discuss open questions that will be critical for assessing the importance of higher-order cellular-scale network analytics in understanding brain function in health and disease.
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Affiliation(s)
- Darian Hadjiabadi
- Department of Neurosurgery, Stanford University, Stanford, CA 94305, USA
- Department of Bioengineering, Stanford University, Stanford, CA 94305, USA
| | - Ivan Soltesz
- Department of Neurosurgery, Stanford University, Stanford, CA 94305, USA
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39
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Li PY, Roxin A. Rapid memory encoding in a recurrent network model with behavioral time scale synaptic plasticity. PLoS Comput Biol 2023; 19:e1011139. [PMID: 37624848 PMCID: PMC10484462 DOI: 10.1371/journal.pcbi.1011139] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/29/2023] [Revised: 09/07/2023] [Accepted: 07/10/2023] [Indexed: 08/27/2023] Open
Abstract
Episodic memories are formed after a single exposure to novel stimuli. The plasticity mechanisms underlying such fast learning still remain largely unknown. Recently, it was shown that cells in area CA1 of the hippocampus of mice could form or shift their place fields after a single traversal of a virtual linear track. In-vivo intracellular recordings in CA1 cells revealed that previously silent inputs from CA3 could be switched on when they occurred within a few seconds of a dendritic plateau potential (PP) in the post-synaptic cell, a phenomenon dubbed Behavioral Time-scale Plasticity (BTSP). A recently developed computational framework for BTSP in which the dynamics of synaptic traces related to the pre-synaptic activity and post-synaptic PP are explicitly modelled, can account for experimental findings. Here we show that this model of plasticity can be further simplified to a 1D map which describes changes to the synaptic weights after a single trial. We use a temporally symmetric version of this map to study the storage of a large number of spatial memories in a recurrent network, such as CA3. Specifically, the simplicity of the map allows us to calculate the correlation of the synaptic weight matrix with any given past environment analytically. We show that the calculated memory trace can be used to predict the emergence and stability of bump attractors in a high dimensional neural network model endowed with BTSP.
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Affiliation(s)
- Pan Ye Li
- Centre de Recerca Matemàtica, Barcelona, Spain
| | - Alex Roxin
- Centre de Recerca Matemàtica, Barcelona, Spain
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40
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Chettih SN, Mackevicius EL, Hale S, Aronov D. Barcoding of episodic memories in the hippocampus of a food-caching bird. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2023:2023.05.27.542597. [PMID: 37461442 PMCID: PMC10349996 DOI: 10.1101/2023.05.27.542597] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 07/24/2023]
Abstract
Episodic memory, or memory of experienced events, is a critical function of the hippocampus1-3. It is therefore important to understand how hippocampal activity represents specific events in an animal's life. We addressed this question in chickadees - specialist food-caching birds that hide food at scattered locations and use memory to find their caches later in time4,5. We performed high-density neural recordings in the hippocampus of chickadees as they cached and retrieved seeds in a laboratory arena. We found that each caching event was represented by a burst of firing in a unique set of hippocampal neurons. These 'barcode-like' patterns of activity were sparse (<10% of neurons active), uncorrelated even for immediately adjacent caches, and different even for separate caches at the same location. The barcode representing a specific caching event was transiently reactivated whenever a bird later interacted with the same cache - for example, to retrieve food. Barcodes co-occurred with conventional place cell activity6,7, as well as location-independent responses to cached seeds. We propose that barcodes are signatures of episodic memories evoked during memory recall. These patterns assign a unique identifier to each event and may be a mechanism for rapid formation and storage of many non-interfering memories.
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Affiliation(s)
| | | | - Stephanie Hale
- Zuckerman Mind Brain Behavior Institute, Columbia University
| | - Dmitriy Aronov
- Zuckerman Mind Brain Behavior Institute, Columbia University
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Parra-Barrero E, Cheng S. Learning to predict future locations with internally generated theta sequences. PLoS Comput Biol 2023; 19:e1011101. [PMID: 37172053 DOI: 10.1371/journal.pcbi.1011101] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2022] [Revised: 05/24/2023] [Accepted: 04/13/2023] [Indexed: 05/14/2023] Open
Abstract
Representing past, present and future locations is key for spatial navigation. Indeed, within each cycle of the theta oscillation, the population of hippocampal place cells appears to represent trajectories starting behind the current position of the animal and sweeping ahead of it. In particular, we reported recently that the position represented by CA1 place cells at a given theta phase corresponds to the location where animals were or will be located at a fixed time interval into the past or future assuming the animal ran at its typical, not the current, speed through that part of the environment. This coding scheme leads to longer theta trajectories, larger place fields and shallower phase precession in areas where animals typically run faster. Here we present a mechanistic computational model that accounts for these experimental observations. The model consists of a continuous attractor network with short-term synaptic facilitation and depression that internally generates theta sequences that advance at a fixed pace. Spatial locations are then mapped onto the active units via modified Hebbian plasticity. As a result, neighboring units become associated with spatial locations further apart where animals run faster, reproducing our earlier experimental results. The model also accounts for the higher density of place fields generally observed where animals slow down, such as around rewards. Furthermore, our modeling results reveal that an artifact of the decoding analysis might be partly responsible for the observation that theta trajectories start behind the animal's current position. Overall, our results shed light on how the hippocampal code might arise from the interplay between behavior, sensory input and predefined network dynamics.
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Affiliation(s)
- Eloy Parra-Barrero
- Institute for Neural Computation, Faculty of Computer Science, Ruhr University Bochum, Bochum, Germany
- International Graduate School of Neuroscience, Ruhr University Bochum, Bochum, Germany
| | - Sen Cheng
- Institute for Neural Computation, Faculty of Computer Science, Ruhr University Bochum, Bochum, Germany
- International Graduate School of Neuroscience, Ruhr University Bochum, Bochum, Germany
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Taxidis J, Madruga B, Melin MD, Lin MZ, Golshani P. Voltage imaging reveals that hippocampal interneurons tune memory-encoding pyramidal sequences. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2023:2023.04.25.538286. [PMID: 37163029 PMCID: PMC10168205 DOI: 10.1101/2023.04.25.538286] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/11/2023]
Abstract
Hippocampal spiking sequences encode and link behavioral information across time. How inhibition sculpts these sequences remains unknown. We performed longitudinal voltage imaging of CA1 parvalbumin- and somatostatin-expressing interneurons in mice during an odor-cued working memory task, before and after training. During this task, pyramidal odor-specific sequences encode the cue throughout a delay period. In contrast, most interneurons encoded odor delivery, but not odor identity, nor delay time. Population inhibition was stable across days, with constant field turnover, though some cells retained odor-responses for days. At odor onset, a brief, synchronous burst of parvalbumin cells was followed by widespread membrane hyperpolarization and then rebound theta-paced spiking, synchronized across cells. Two-photon calcium imaging revealed that most pyramidal cells were suppressed throughout the odor. Positive pyramidal odor-responses coincided with interneuronal rebound spiking; otherwise, they had weak odor-selectivity. Therefore, inhibition increases the signal-to-noise ratio of cue representations, which is crucial for entraining downstream targets.
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Geiller T, Priestley JB, Losonczy A. A local circuit-basis for spatial navigation and memory processes in hippocampal area CA1. Curr Opin Neurobiol 2023; 79:102701. [PMID: 36878147 PMCID: PMC10020891 DOI: 10.1016/j.conb.2023.102701] [Citation(s) in RCA: 13] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/24/2022] [Revised: 02/02/2023] [Accepted: 02/06/2023] [Indexed: 03/06/2023]
Abstract
The hippocampus is a multi-stage neural circuit that is critical for memory formation. Its distinct anatomy has long inspired theories that rely on local interactions between neurons within each subregion in order to perform serial operations important for memory encoding and storage. These local computations have received less attention in CA1 area, the primary output node of the hippocampus, where excitatory neurons are thought to be only very sparsely interconnected. However, recent findings have demonstrated the power of local circuitry in CA1, with evidence for strong functional interactions among excitatory neurons, regulation by diverse inhibitory microcircuits, and novel plasticity rules that can profoundly reshape the hippocampal ensemble code. Here we review how these properties expand the dynamical repertoire of CA1 beyond the confines of feedforward processing, and what implications they have for hippocampo-cortical functions in memory formation.
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Affiliation(s)
- Tristan Geiller
- Department of Neuroscience, Columbia University, New York, NY, 10027, USA; Mortimer B Zuckerman Mind Brain Behavior Institute, New York, NY, 10027, USA. https://twitter.com/tgeiller
| | - James B Priestley
- Department of Neuroscience, Columbia University, New York, NY, 10027, USA; Mortimer B Zuckerman Mind Brain Behavior Institute, New York, NY, 10027, USA; Center for Theoretical Neuroscience, Columbia University, New York, NY, 10027, USA. https://twitter.com/jamespriestley4
| | - Attila Losonczy
- Department of Neuroscience, Columbia University, New York, NY, 10027, USA; Mortimer B Zuckerman Mind Brain Behavior Institute, New York, NY, 10027, USA; Kavli Institute for Brain Science, Columbia University, New York, NY, 10027, USA.
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Ratigan HC, Krishnan S, Smith S, Sheffield MEJ. Direct Thalamic Inputs to Hippocampal CA1 Transmit a Signal That Suppresses Ongoing Contextual Fear Memory Retrieval. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2023:2023.03.27.534420. [PMID: 37034812 PMCID: PMC10081195 DOI: 10.1101/2023.03.27.534420] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 06/19/2023]
Abstract
Memory retrieval of fearful experiences is essential for survival but can be maladaptive if not appropriately suppressed. Fear memories can be acquired through contextual fear conditioning (CFC) which relies on the hippocampus. The thalamic subregion Nucleus Reuniens (NR) is necessary for contextual fear extinction and strongly projects to hippocampal subregion CA1. However, the NR-CA1 pathway has not been investigated during behavior, leaving unknown its role in contextual fear memory retrieval. We implement a novel head-restrained virtual reality CFC paradigm and show that inactivation of the NR-CA1 pathway prolongs fearful freezing epochs, induces fear generalization, and delays extinction. We use in vivo sub-cellular imaging to specifically record NR-axons innervating CA1 before and after CFC. We find NR-axons become selectively tuned to freezing only after CFC, and this activity is well-predicted by an encoding model. We conclude that the NR-CA1 pathway actively suppresses fear responses by disrupting ongoing hippocampal-dependent contextual fear memory retrieval.
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Affiliation(s)
- Heather C. Ratigan
- Department of Neurobiology, University of Chicago, Chicago, IL 60615, USA
- Doctoral Program in Neurobiology, University of Chicago, Chicago, IL 60615, USA
- Neuroscience Institute, University of Chicago, Chicago, IL 60615, USA
| | - Seetha Krishnan
- Department of Neurobiology, University of Chicago, Chicago, IL 60615, USA
- Neuroscience Institute, University of Chicago, Chicago, IL 60615, USA
| | - Shai Smith
- Department of Neurobiology, University of Chicago, Chicago, IL 60615, USA
- Undergraduate Program in Neuroscience, University of Chicago, Chicago, IL 60615, USA
| | - Mark E. J. Sheffield
- Department of Neurobiology, University of Chicago, Chicago, IL 60615, USA
- Doctoral Program in Neurobiology, University of Chicago, Chicago, IL 60615, USA
- Undergraduate Program in Neuroscience, University of Chicago, Chicago, IL 60615, USA
- Neuroscience Institute, University of Chicago, Chicago, IL 60615, USA
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Chen S, Yang Q, Lim S. Efficient inference of synaptic plasticity rule with Gaussian process regression. iScience 2023; 26:106182. [PMID: 36879810 PMCID: PMC9985048 DOI: 10.1016/j.isci.2023.106182] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/22/2022] [Revised: 01/24/2023] [Accepted: 02/07/2023] [Indexed: 02/16/2023] Open
Abstract
Finding the form of synaptic plasticity is critical to understanding its functions underlying learning and memory. We investigated an efficient method to infer synaptic plasticity rules in various experimental settings. We considered biologically plausible models fitting a wide range of in-vitro studies and examined the recovery of their firing-rate dependence from sparse and noisy data. Among the methods assuming low-rankness or smoothness of plasticity rules, Gaussian process regression (GPR), a nonparametric Bayesian approach, performs the best. Under the conditions measuring changes in synaptic weights directly or measuring changes in neural activities as indirect observables of synaptic plasticity, which leads to different inference problems, GPR performs well. Also, GPR could simultaneously recover multiple plasticity rules and robustly perform under various plasticity rules and noise levels. Such flexibility and efficiency, particularly at the low sampling regime, make GPR suitable for recent experimental developments and inferring a broader class of plasticity models.
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Affiliation(s)
- Shirui Chen
- Department of Applied Mathematics, University of Washington, Lewis Hall 201, Box 353925, Seattle, WA 98195-3925, USA
- Neural Science, New York University Shanghai, 1555 Century Avenue, Shanghai, 200122, China
| | - Qixin Yang
- The Edmond and Lily Safra Center for Brain Sciences, The Hebrew University, The Suzanne and Charles Goodman Brain Sciences Building, Edmond J. Safra Campus, Jerusalem, 9190401, Israel
- Neural Science, New York University Shanghai, 1555 Century Avenue, Shanghai, 200122, China
| | - Sukbin Lim
- Neural Science, New York University Shanghai, 1555 Century Avenue, Shanghai, 200122, China
- NYU-ECNU Institute of Brain and Cognitive Science at NYU Shanghai, 3663 Zhongshan Road North, Shanghai, 200062, China
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Spike timing-dependent plasticity and memory. Curr Opin Neurobiol 2023; 80:102707. [PMID: 36924615 DOI: 10.1016/j.conb.2023.102707] [Citation(s) in RCA: 13] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/27/2022] [Revised: 01/18/2023] [Accepted: 02/15/2023] [Indexed: 03/16/2023]
Abstract
Spike timing-dependent plasticity (STDP) is a bidirectional form of synaptic plasticity discovered about 30 years ago and based on the relative timing of pre- and post-synaptic spiking activity with a millisecond precision. STDP is thought to be involved in the formation of memory but the millisecond-precision spike-timing required for STDP is difficult to reconcile with the much slower timescales of behavioral learning. This review therefore aims to expose and discuss recent findings about i) the multiple STDP learning rules at both excitatory and inhibitory synapses in vitro, ii) the contribution of STDP-like synaptic plasticity in the formation of memory in vivo and iii) the implementation of STDP rules in artificial neural networks and memristive devices.
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Entorhinal cortex directs learning-related changes in CA1 representations. Nature 2022; 611:554-562. [DOI: 10.1038/s41586-022-05378-6] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/10/2021] [Accepted: 09/20/2022] [Indexed: 11/16/2022]
Abstract
AbstractLearning-related changes in brain activity are thought to underlie adaptive behaviours1,2. For instance, the learning of a reward site by rodents requires the development of an over-representation of that location in the hippocampus3–6. How this learning-related change occurs remains unknown. Here we recorded hippocampal CA1 population activity as mice learned a reward location on a linear treadmill. Physiological and pharmacological evidence suggests that the adaptive over-representation required behavioural timescale synaptic plasticity (BTSP)7. BTSP is known to be driven by dendritic voltage signals that we proposed were initiated by input from entorhinal cortex layer 3 (EC3). Accordingly, the CA1 over-representation was largely removed by optogenetic inhibition of EC3 activity. Recordings from EC3 neurons revealed an activity pattern that could provide an instructive signal directing BTSP to generate the over-representation. Consistent with this function, our observations show that exposure to a second environment possessing a prominent reward-predictive cue resulted in both EC3 activity and CA1 place field density that were more elevated at the cue than at the reward. These data indicate that learning-related changes in the hippocampus are produced by synaptic plasticity directed by an instructive signal from the EC3 that seems to be specifically adapted to the behaviourally relevant features of the environment.
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Fuchsberger T, Clopath C, Jarzebowski P, Brzosko Z, Wang H, Paulsen O. Postsynaptic burst reactivation of hippocampal neurons enables associative plasticity of temporally discontiguous inputs. eLife 2022; 11:e81071. [PMID: 36226826 PMCID: PMC9612916 DOI: 10.7554/elife.81071] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/23/2022] [Accepted: 10/09/2022] [Indexed: 11/20/2022] Open
Abstract
A fundamental unresolved problem in neuroscience is how the brain associates in memory events that are separated in time. Here, we propose that reactivation-induced synaptic plasticity can solve this problem. Previously, we reported that the reinforcement signal dopamine converts hippocampal spike timing-dependent depression into potentiation during continued synaptic activity (Brzosko et al., 2015). Here, we report that postsynaptic bursts in the presence of dopamine produce input-specific LTP in mouse hippocampal synapses 10 min after they were primed with coincident pre- and post-synaptic activity (post-before-pre pairing; Δt = -20 ms). This priming activity induces synaptic depression and sets an NMDA receptor-dependent silent eligibility trace which, through the cAMP-PKA cascade, is rapidly converted into protein synthesis-dependent synaptic potentiation, mediated by a signaling pathway distinct from that of conventional LTP. This synaptic learning rule was incorporated into a computational model, and we found that it adds specificity to reinforcement learning by controlling memory allocation and enabling both 'instructive' and 'supervised' reinforcement learning. We predicted that this mechanism would make reactivated neurons activate more strongly and carry more spatial information than non-reactivated cells, which was confirmed in freely moving mice performing a reward-based navigation task.
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Affiliation(s)
- Tanja Fuchsberger
- Department of Physiology, Development and Neuroscience, Physiological Laboratory, University of CambridgeCambridgeUnited Kingdom
| | - Claudia Clopath
- Department of Bioengineering, Imperial College LondonLondonUnited Kingdom
| | - Przemyslaw Jarzebowski
- Department of Physiology, Development and Neuroscience, Physiological Laboratory, University of CambridgeCambridgeUnited Kingdom
| | - Zuzanna Brzosko
- Department of Physiology, Development and Neuroscience, Physiological Laboratory, University of CambridgeCambridgeUnited Kingdom
| | - Hongbing Wang
- Department of Physiology, Michigan State UniversityEast LansingUnited States
| | - Ole Paulsen
- Department of Physiology, Development and Neuroscience, Physiological Laboratory, University of CambridgeCambridgeUnited Kingdom
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Jeong N, Singer AC. Learning from inhibition: Functional roles of hippocampal CA1 inhibition in spatial learning and memory. Curr Opin Neurobiol 2022; 76:102604. [PMID: 35810533 PMCID: PMC11414469 DOI: 10.1016/j.conb.2022.102604] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/14/2022] [Revised: 05/19/2022] [Accepted: 06/07/2022] [Indexed: 11/19/2022]
Abstract
Hippocampal inhibitory interneurons exert a powerful influence on learning and memory. Inhibitory interneurons are known to play a major role in many diseases that affect memory, and to strongly influence brain functions required for memory-related tasks. While previous studies involving genetic, optogenetic, and pharmacological manipulations have shown that hippocampal interneurons play essential roles in spatial and episodic learning and memory, exactly how interneurons affect local circuit computations during spatial navigation is not well understood. Given the significant anatomical, morphological, and functional heterogeneity in hippocampal interneurons, one may suspect cell-type specific roles in circuit computations. Here, we review emerging evidence of CA1 hippocampal interneurons' role in local circuit computations that support spatial learning and memory and discuss open questions about CA1 interneurons in spatial learning.
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Affiliation(s)
- Nuri Jeong
- Coulter Department of Biomedical Engineering, Georgia Institute of Technology & Emory University, Atlanta, GA, USA; Neuroscience Graduate Program, Graduate Division of Biological and Biomedical Sciences, Emory University, Atlanta, GA, 30322, USA. https://twitter.com/nuriscientist
| | - Annabelle C Singer
- Coulter Department of Biomedical Engineering, Georgia Institute of Technology & Emory University, Atlanta, GA, USA.
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Jedlicka P, Tomko M, Robins A, Abraham WC. Contributions by metaplasticity to solving the Catastrophic Forgetting Problem. Trends Neurosci 2022; 45:656-666. [PMID: 35798611 DOI: 10.1016/j.tins.2022.06.002] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2022] [Revised: 06/06/2022] [Accepted: 06/09/2022] [Indexed: 10/17/2022]
Abstract
Catastrophic forgetting (CF) refers to the sudden and severe loss of prior information in learning systems when acquiring new information. CF has been an Achilles heel of standard artificial neural networks (ANNs) when learning multiple tasks sequentially. The brain, by contrast, has solved this problem during evolution. Modellers now use a variety of strategies to overcome CF, many of which have parallels to cellular and circuit functions in the brain. One common strategy, based on metaplasticity phenomena, controls the future rate of change at key connections to help retain previously learned information. However, the metaplasticity properties so far used are only a subset of those existing in neurobiology. We propose that as models become more sophisticated, there could be value in drawing on a richer set of metaplasticity rules, especially when promoting continual learning in agents moving about the environment.
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Affiliation(s)
- Peter Jedlicka
- ICAR3R - Interdisciplinary Centre for 3Rs in Animal Research, Faculty of Medicine, Justus Liebig University, Giessen, Germany; Institute of Clinical Neuroanatomy, Neuroscience Center, Goethe University Frankfurt, Frankfurt/Main, Germany; Frankfurt Institute for Advanced Studies, Frankfurt 60438, Germany.
| | - Matus Tomko
- ICAR3R - Interdisciplinary Centre for 3Rs in Animal Research, Faculty of Medicine, Justus Liebig University, Giessen, Germany; Institute of Molecular Physiology and Genetics, Centre of Biosciences, Slovak Academy of Sciences, Bratislava, Slovakia
| | - Anthony Robins
- Department of Computer Science, University of Otago, Dunedin 9016, New Zealand
| | - Wickliffe C Abraham
- Department of Psychology, Brain Health Research Centre, University of Otago, Dunedin 9054, New Zealand.
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