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Langenfeld NJ, Skabelund HA, Heins R, Bugbee B. Advantages of a novel in situ pH measurement for soilless media. Front Plant Sci 2024; 15:1334328. [PMID: 38601303 PMCID: PMC11004321 DOI: 10.3389/fpls.2024.1334328] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/07/2023] [Accepted: 03/18/2024] [Indexed: 04/12/2024]
Abstract
Rhizosphere pH determines nutrient bioavailability, but this pH is difficult to measure. Standard pH tests require adding water to growth media. This dilutes hydrogen ion activity and increases pH. We used a novel, in situ, pointed-tip electrode to estimate rhizosphere pH without dilution. Measurements from this electrode matched a research-grade pH meter in hydroponic nutrient solutions. We then compared measurements from this electrode to saturated paste and pour-through methods in peat moss, coconut coir, and pine bark. The pointed-tip electrode was unable to accurately measure pH in the highly-porous pine bark media. Adding deionized water to the other media at container capacity using the saturated paste method resulted in a pH that was 0.59 ± 0.30 units higher than the initial in situ measurement at the top of the container. This increase aligns with established solution chemistry principles. Measurements of pH using the pour-through method were 0.38 ± 0.24 pH units higher than in situ measurements at the bottom of the container. We conclude that in situ pH measurements are not subject to dilution and are thus more representative of the rhizosphere pH than the saturated paste and pour-through techniques.
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Affiliation(s)
| | - Hikari Ai Skabelund
- Crop Physiology Laboratory, Utah State University, Logan, UT, United States
- Department of Horticultural Sciences, Texas A&M University, College Station, TX, United States
| | - Royal Heins
- Crop Physiology Laboratory, Utah State University, Logan, UT, United States
| | - Bruce Bugbee
- Crop Physiology Laboratory, Utah State University, Logan, UT, United States
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2
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Langenfeld NJ, Bugbee B. An improved digestion and analysis procedure for silicon in plant tissue. PLoS One 2023; 18:e0289151. [PMID: 37682894 PMCID: PMC10490927 DOI: 10.1371/journal.pone.0289151] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/10/2023] [Accepted: 07/12/2023] [Indexed: 09/10/2023] Open
Abstract
Silicon (Si) in plant tissues reduces abiotic and biotic stress, but it is incorporated as silica (SiO2), which is difficult to solubilize for analysis. We modified an oven-induced tissue-digestion and analysis method to improve Si solubilization and validated its accuracy by quantifying the mass-balance recovery of Si from the hydroponic solution and plant tissues of cucumber (Cucumis sativus). Leaf, stem, and root tissues were dried, finely-ground, and digested in 12.5 molar sodium hydroxide at 95°C for 4 hours. Solutions were then acidified with 6 molar hydrochloric acid to achieve a pH below 2 for measurement of Si using the molybdate blue colorimetric method. Interference of phosphorus in the analysis was minimized by increasing the addition of oxalic acid from 0.6 to 1.1 molar. We recovered 101% ± 13% of the expected Si, calculated using mass-balance recovery, in leaf, stem, and root tissues across 15 digestions. This Si recovery was fourteen-fold higher than the standard acid-extraction method and similar to a USDA-ARS alkaline-extraction method. Our procedure offers a low-cost, accurate method for extraction and analysis of Si in plant tissues.
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Affiliation(s)
- Noah James Langenfeld
- Crop Physiology Laboratory, Department of Plants, Soils, and Climate, Utah State University, Logan, Utah, United States of America
| | - Bruce Bugbee
- Crop Physiology Laboratory, Department of Plants, Soils, and Climate, Utah State University, Logan, Utah, United States of America
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3
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Westmoreland FM, Kusuma P, Bugbee B. Elevated UV photon fluxes minimally affected cannabinoid concentration in a high-CBD cultivar. Front Plant Sci 2023; 14:1220585. [PMID: 37636099 PMCID: PMC10452874 DOI: 10.3389/fpls.2023.1220585] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/10/2023] [Accepted: 07/18/2023] [Indexed: 08/29/2023]
Abstract
Ultraviolet photons (UV) can damage critical biochemical processes. Plants synthesize photo-protective pigments that absorb UV to minimize damage. Cannabinoids absorb UV, so increased UV has the potential to increase cannabinoid synthesis. Studies in the 1980's provided some evidence for this hypothesis in low-cannabinoid cultivars, but recent studies did not find an increase in cannabinoid synthesis with increasing UV in high-cannabinoid cultivars. These studies used low UV photon fluxes, so we examined the effect of higher UV photon fluxes. We used fluorescent UV lights with 55% UV-B (280 to 314 nm) and 45% UV-A (315 to 399 nm). Treatments began three weeks after the start of short days and continued for five weeks until harvest. Established weighting factors were used to calculate the daily biologically effective UV photon flux (UV-PFDBE; 280 to 399 nm). Daily UV-PFDBE levels were 0, 0.02, 0.05, and 0.11 mol m-2 d-1 with a background daily light integral (DLI) of 30 mol m-2 d-1. This provided a ratio of daily UV-PFDBE to DLI of 41 to 218% of summer sunlight in the field. Cannabinoid concentration was 3 to 13% higher than the control in UV treated plants, but the effect was not statistically significant. Fv/Fm and flower yield were reduced only in the highest UV treatment. These data support recent literature and lead us to conclude that an elevated flux of UV photons is not an effective approach to increase cannabinoid concentration in high-cannabinoid cultivars.
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Affiliation(s)
- F. Mitchell Westmoreland
- Department of Plants, Soils and Climate, Crop Physiology Laboratory, Utah State University, Logan, UT, United States
| | - Paul Kusuma
- Department of Plants, Soils and Climate, Crop Physiology Laboratory, Utah State University, Logan, UT, United States
- Department of Plant Sciences, Horticulture and Product Physiology, Wageningen University & Research, Wageningen, Netherlands
| | - Bruce Bugbee
- Department of Plants, Soils and Climate, Crop Physiology Laboratory, Utah State University, Logan, UT, United States
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Wheeler WD, Black B, Bugbee B. Assessing water stress in a high-density apple orchard using trunk circumference variation, sap flow index and stem water potential. Front Plant Sci 2023; 14:1214429. [PMID: 37600171 PMCID: PMC10435262 DOI: 10.3389/fpls.2023.1214429] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 04/29/2023] [Accepted: 07/19/2023] [Indexed: 08/22/2023]
Abstract
Introduction Automated plant-based measurements of water stress have the potential to advance precision irrigation in orchard crops. Previous studies have shown correlations between sap flow, line variable differential transform (LVDT) dendrometers and fruit tree drought response. Here we report season-long automated measurement of maximum daily change in trunk diameter using band dendrometers and heated needles to measure a simplified sap flow index (SFI). Methods Measurements were made on two apple cultivars that were stressed at 7 to 12 day intervals by withholding irrigation until the average stem water potential (ΨStem) dropped below -1.5 MPa, after which irrigation was restored and the drought cycle repeated. Results Dendrometer measurements of maximum daily trunk shrinkage (MDS) were highly correlated (r² = 0.85) with pressure chamber measurements of stem water potential. The SFI measurements were less correlated with stem water potential but were highly correlated with evaporative demand (r² = 0.82) as determined by the Penman-Monteith equation (ETr). Discussion The high correlation of SFI to ETr suggests that high-density orchards resemble a continuous surface, unlike orchards with widely spaced trees. The correlations of MDS and SFI to ΨStem were higher during the early season than the late season growth. Band dendrometers are less labor intensive to install than LVDT dendrometers and are non-invasive so are well suited to commercialization.
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Affiliation(s)
- William D. Wheeler
- Crop Physiology Laboratory, Department of Plants, Soils, and Climate, Utah State University, Logan, UT, United States
| | - Brent Black
- Pomology Extension, Department of Plants, Soils, and Climate, Utah State University, Logan, UT, United States
| | - Bruce Bugbee
- Crop Physiology Laboratory, Department of Plants, Soils, and Climate, Utah State University, Logan, UT, United States
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Kusuma P, Bugbee B. On the contrasting morphological response to far-red at high and low photon fluxes. Front Plant Sci 2023; 14:1185622. [PMID: 37332690 PMCID: PMC10274578 DOI: 10.3389/fpls.2023.1185622] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/13/2023] [Accepted: 05/10/2023] [Indexed: 06/20/2023]
Abstract
Plants compete for sunlight and have evolved to perceive shade through both relative increases in the flux of far-red photons (FR; 700 to 750 nm) and decreases in the flux of all photons (intensity). These two signals interact to control stem elongation and leaf expansion. Although the interacting effects on stem elongation are well quantified, responses for leaf expansion are poorly characterized. Here we report a significant interaction between far-red fraction and total photon flux. Extended photosynthetic photon flux density (ePPFD; 400 to 750 nm) was maintained at three levels (50/100, 200 and 500 µmol m-2 s-1), each with a range of 2 to 33% FR. Increasing FR increased leaf expansion in three cultivars of lettuce at the highest ePPFD but decreased expansion at the lowest ePPFD. This interaction was attributed to differences in biomass partitioning between leaves and stems. Increased FR favored stem elongation and biomass partitioning to stems at low ePPFD and favored leaf expansion at high ePPFD. In cucumber, leaf expansion was increased with increasing percent FR under all ePPFD levels showing minimal interaction. The interactions (and lack thereof) have important implications for horticulture and warrant further study for plant ecology.
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Affiliation(s)
- Paul Kusuma
- Department of Plant Sciences, Horticulture and Product Physiology, Wageningen University and Research, Wageningen, Netherlands
- Crop Physiology Laboratory, Department of Plants Soils and Climate, Utah State University, Logan, UT, United States
| | - Bruce Bugbee
- Crop Physiology Laboratory, Department of Plants Soils and Climate, Utah State University, Logan, UT, United States
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Caddell D, Langenfeld NJ, Eckels MJH, Zhen S, Klaras R, Mishra L, Bugbee B, Coleman-Derr D. Photosynthesis in rice is increased by CRISPR/Cas9-mediated transformation of two truncated light-harvesting antenna. Front Plant Sci 2023; 14:1050483. [PMID: 36743495 PMCID: PMC9893291 DOI: 10.3389/fpls.2023.1050483] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/21/2022] [Accepted: 01/09/2023] [Indexed: 06/18/2023]
Abstract
Plants compete for light partly by over-producing chlorophyll in leaves. The resulting high light absorption is an effective strategy for out competing neighbors in mixed communities, but it prevents light transmission to lower leaves and limits photosynthesis in dense agricultural canopies. We used a CRISPR/Cas9-mediated approach to engineer rice plants with truncated light-harvesting antenna (TLA) via knockout mutations to individual antenna assembly component genes CpSRP43, CpSRP54a, and its paralog, CpSRP54b. We compared the photosynthetic contributions of these components in rice by studying the growth rates of whole plants, quantum yield of photosynthesis, chlorophyll density and distribution, and phenotypic abnormalities. Additionally, we investigated a Poales-specific duplication of CpSRP54. The Poales are an important family that includes staple crops such as rice, wheat, corn, millet, and sorghum. Mutations in any of these three genes involved in antenna assembly decreased chlorophyll content and light absorption and increased photosynthesis per photon absorbed (quantum yield). These results have significant implications for the improvement of high leaf-area-index crop monocultures.
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Affiliation(s)
- Daniel Caddell
- Plant Gene Expression Center, United States Department of Agriculture - Agricultural Research Service (USDA ARS), Albany, CA, United States
- Plant and Microbial Biology Department, University of California at Berkeley, Berkeley, CA, United States
| | - Noah J. Langenfeld
- Department of Plants, Soils, and Climate, Utah State University, Logan, UT, United States
| | - Madigan JH. Eckels
- Department of Plants, Soils, and Climate, Utah State University, Logan, UT, United States
| | - Shuyang Zhen
- Department of Horticultural Sciences, Texas A&M University, College Station, TX, United States
| | - Rachel Klaras
- Plant and Microbial Biology Department, University of California at Berkeley, Berkeley, CA, United States
| | - Laxmi Mishra
- Plant and Microbial Biology Department, University of California at Berkeley, Berkeley, CA, United States
| | - Bruce Bugbee
- Department of Plants, Soils, and Climate, Utah State University, Logan, UT, United States
| | - Devin Coleman-Derr
- Plant Gene Expression Center, United States Department of Agriculture - Agricultural Research Service (USDA ARS), Albany, CA, United States
- Plant and Microbial Biology Department, University of California at Berkeley, Berkeley, CA, United States
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Westmoreland FM, Bugbee B. Sustainable Cannabis Nutrition: Elevated root-zone phosphorus significantly increases leachate P and does not improve yield or quality. Front Plant Sci 2022; 13:1015652. [PMID: 36483962 PMCID: PMC9724152 DOI: 10.3389/fpls.2022.1015652] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/09/2022] [Accepted: 10/17/2022] [Indexed: 06/17/2023]
Abstract
Phosphorus (P) is an essential but often over-applied nutrient in agricultural systems. Because of its detrimental environmental effects, P fertilization is well studied in crop production. Controlled environment agriculture allows for precise control of root-zone P and has the potential to improve sustainability over field agriculture. Medical Cannabis is uniquely cultivated for the unfertilized female inflorescence and mineral nutrition can affect the yield and chemical composition of these flowers. P typically accumulates in seeds, but its partitioning in unfertilized Cannabis flowers is not well studied. Here we report the effect of increasing P (25, 50, and 75 mg P per L) in continuous liquid fertilizer on flower yield, cannabinoid concentration, leachate P, nutrient partitioning, and phosphorus use efficiency (PUE) of a high-CBD Cannabis variety. There was no significant effect of P concentration on flower yield or cannabinoid concentration, but there were significant differences in leachate P, nutrient partitioning, and PUE. Leachate P increased 12-fold in response to the 3-fold increase in P input. The P concentration in the unfertilized flowers increased to more than 1%, but this did not increase yield or quality. The fraction of P in the flowers increased from 25 to 65% and PUE increased from 31 to 80% as the as the P input decreased from 75 to 25 mg per L. Avoiding excessive P fertilization can decrease the environmental impact of Cannabis cultivation.
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Langenfeld NJ, Bugbee B. Germination and seedling establishment for hydroponics: The benefit of slant boards. PLoS One 2022; 17:e0275710. [PMID: 36197903 PMCID: PMC9534409 DOI: 10.1371/journal.pone.0275710] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/15/2022] [Accepted: 09/21/2022] [Indexed: 11/28/2022] Open
Abstract
Germination and seedling establishment for transplanting into hydroponics often uses porous substrates, but fine roots grow into these substrates, and they cannot be removed without damaging these roots. Seedlings transplanted without removal of substrates can cause interactions with solution chemistry or addition of particulates to the nutrient solution. Germination of seeds on slant boards is clean, uniform, and reduces the time to transplanting. Slant boards facilitate development of long roots, which maximize exposure of the primary root to the nutrient solution after transplanting. The "boards" are made from thin acrylic or polycarbonate sheets with germination paper on top. Seeds are held in place by covering with thin paper before vertical placement of the boards in the container. Four to twelve days later, the seedlings with long roots can be removed from the paper without damage and transplanted into the hydroponic system. Here we describe slant board construction and procedures for rapid germination and transplanting in hydroponics.
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Affiliation(s)
- Noah James Langenfeld
- Crop Physiology Laboratory, Department of Plants, Soils, and Climate, Utah State University, Logan, Utah, United States of America
- * E-mail:
| | - Bruce Bugbee
- Crop Physiology Laboratory, Department of Plants, Soils, and Climate, Utah State University, Logan, Utah, United States of America
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Zhen S, van Iersel MW, Bugbee B. Photosynthesis in sun and shade: the surprising importance of far-red photons. New Phytol 2022; 236:538-546. [PMID: 35832002 DOI: 10.1111/nph.18375] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/01/2022] [Accepted: 07/07/2022] [Indexed: 06/15/2023]
Abstract
The current definition of photosynthetically active radiation includes only photons from 400 up to 700 nm, despite evidence of the synergistic interaction between far-red photons and shorter-wavelength photons. The synergy between far-red and shorter-wavelength photons has not been studied in sunlight under natural conditions. We used a filter to remove photons above 700 nm to quantify the effects on photosynthesis in diverse species under full sun, medium light intensity and vegetation shade. Far-red photons (701 to 750 nm) in sunlight are used efficiently for photosynthesis. This is especially important for leaves in vegetation shade, where far-red photons can be > 50% of the total incident photons between 400 and 750 nm. Far-red photons accounted for 24-25% of leaf gross photosynthesis (Pgross ) in a C3 and a C4 species when sunlight was filtered through a leaf, and 10-14% of leaf Pgross in a tree and an understory species in deep shade. Accounting for the photosynthetic activity of far-red photons is critical for accurate measurement and modeling of photosynthesis at single leaf, canopy and ecosystem scales. This, in turn, is crucial in understanding crop productivity, the global carbon cycle and climate change impacts on agriculture and ecosystems.
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Affiliation(s)
- Shuyang Zhen
- Department of Horticultural Sciences, Texas A&M University, College Station, TX, 77843, USA
| | - Marc W van Iersel
- Department of Horticulture, University of Georgia, Athens, GA, 30602, USA
| | - Bruce Bugbee
- Department of Plants, Soils and Climate, Utah State University, Logan, UT, 84341, USA
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Abstract
Urea is a byproduct of the urea cycle in metabolism and is excreted through urine and sweat. Ammonia, which is toxic at low levels, is converted to the safe storage form of urea, which represents the largest efflux of nitrogen from many organisms. Urea is an important nitrogen source in agriculture, is added to many industrial products, and is a large component in wastewater. The enzyme urease hydrolyzes urea to ammonia and bicarbonate. This reaction is microbially mediated in soils, hydroponic solutions, and wastewater recycling and is catalyzed in vivo in plants using native urease, making measurement of urea environmentally important. Both direct and indirect methods to measure urea exist. This protocol uses diacetyl monoxime to directly determine the concentration of urea in solution. The protocol provides repeatable results and stable reagents with good color stability and simple measurement techniques for use in any lab with a spectrophotometer. The reaction between diacetyl monoxime and urea in the presence of sulfuric acid, phosphoric acid, thiosemicarbazide, and ferric chloride produces a chromophore with a peak absorbance at 520 nm and a linear relationship between concentration and absorbance from 0.4 to 5.0 mM urea in this protocol. The lack of detectable interferences makes this protocol suitable for the determination of millimolar levels of urea in wastewater streams and hydroponic solutions.
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Affiliation(s)
- Noah James Langenfeld
- Department of Plants, Soils, and Climate, Crop Physiology Laboratory, Utah State University, Logan, Utah, United States of America
| | - Lauren Elizabeth Payne
- Department of Plants, Soils, and Climate, Crop Physiology Laboratory, Utah State University, Logan, Utah, United States of America
| | - Bruce Bugbee
- Department of Plants, Soils, and Climate, Crop Physiology Laboratory, Utah State University, Logan, Utah, United States of America
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Kusuma P, Westmoreland FM, Zhen S, Bugbee B. Photons from NIR LEDs can delay flowering in short-day soybean and Cannabis: Implications for phytochrome activity. PLoS One 2021; 16:e0255232. [PMID: 34314454 PMCID: PMC8315492 DOI: 10.1371/journal.pone.0255232] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/05/2021] [Accepted: 07/12/2021] [Indexed: 11/19/2022] Open
Abstract
Photons during the dark period delay flowering in short-day plants (SDP). Red photons applied at night convert phytochromes to the active far-red absorbing form (Pfr), leading to inhibition of flowering. Far-red photons (greater than 700 nm) re-induce flowering when applied after a pulse of red photons during the dark period. However, far-red photons at sufficiently high intensity and duration delay flowering in sensitive species. Mechanistically, this response occurs because phytochrome-red (Pr) absorbance is not zero beyond 700 nm. We applied nighttime photons from near infrared (NIR) LEDs (peak 850 nm) over a 12 h dark period. Flowering was delayed in Glycine max and Cannabis sativa (two photosensitive species) by 3 and 12 days, respectively, as the flux of photons from NIR LEDs was increased up to 83 and 116 μmol m-2 s-1. This suggests that long wavelength photons from NIR LEDs can activate phytochromes (convert Pr to Pfr) and thus alter plant development.
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Affiliation(s)
- Paul Kusuma
- Department of Plants Soils and Climate, Crop Physiology Laboratory, Utah State University, Logan, UT, United States of America
| | - F. Mitchell Westmoreland
- Department of Plants Soils and Climate, Crop Physiology Laboratory, Utah State University, Logan, UT, United States of America
| | - Shuyang Zhen
- Department of Horticultural Sciences, Texas A&M University, College Station, TX, United States of America
| | - Bruce Bugbee
- Department of Plants Soils and Climate, Crop Physiology Laboratory, Utah State University, Logan, UT, United States of America
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Zhen S, van Iersel M, Bugbee B. Why Far-Red Photons Should Be Included in the Definition of Photosynthetic Photons and the Measurement of Horticultural Fixture Efficacy. Front Plant Sci 2021; 12:693445. [PMID: 34239530 PMCID: PMC8258408 DOI: 10.3389/fpls.2021.693445] [Citation(s) in RCA: 18] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/11/2021] [Accepted: 05/20/2021] [Indexed: 05/27/2023]
Affiliation(s)
- Shuyang Zhen
- Department of Horticultural Sciences, Texas A&M University, College Station, TX, United States
| | - Marc van Iersel
- Department of Horticulture, University of Georgia, Athens, GA, United States
| | - Bruce Bugbee
- Department of Plants, Soils and Climate, Utah State University, Logan, UT, United States
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13
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Kusuma P, Bugbee B. Improving the Predictive Value of Phytochrome Photoequilibrium: Consideration of Spectral Distortion Within a Leaf. Front Plant Sci 2021; 12:596943. [PMID: 34108976 PMCID: PMC8181145 DOI: 10.3389/fpls.2021.596943] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/20/2020] [Accepted: 04/28/2021] [Indexed: 06/01/2023]
Abstract
The ratio of active phytochrome (Pfr) to total phytochrome (Pr + Pfr), called phytochrome photo-equilibrium (PPE; also called phytochrome photostationary state, PSS) has been used to explain shade avoidance responses in both natural and controlled environments. PPE is commonly estimated using measurements of the spectral photon distribution (SPD) above the canopy and photoconversion coefficients. This approach has effectively predicted morphological responses when only red and far-red (FR) photon fluxes have varied, but controlled environment research often utilizes unique ratios of wavelengths so a more rigorous evaluation of the predictive ability of PPE on morphology is warranted. Estimations of PPE have rarely incorporated the optical effects of spectral distortion within a leaf caused by pigment absorbance and photon scattering. We studied stem elongation rate in the model plant cucumber under diverse spectral backgrounds over a range of one to 45% FR (total photon flux density, 400-750 nm, of 400 μmol m-2 s-1) and found that PPE was not predictive when blue and green varied. Preferential absorption of red and blue photons by chlorophyll results in an SPD that is relatively enriched in green and FR at the phytochrome molecule within a cell. This can be described by spectral distortion functions for specific layers of a leaf. Multiplying the photoconversion coefficients by these distortion functions yields photoconversion weighting factors that predict phytochrome conversion at the site of photon perception within leaf tissue. Incorporating spectral distortion improved the predictive value of PPE when phytochrome was assumed to be homogeneously distributed within the whole leaf. In a supporting study, the herbicide norflurazon was used to remove chlorophyll in seedlings. Using distortion functions unique to either green or white cotyledons, we came to the same conclusions as with whole plants in the longer-term study. Leaves of most species have similar spectral absorbance so this approach for predicting PPE should be broadly applicable. We provide a table of the photoconversion weighting factors. Our analysis indicates that the simple, intuitive ratio of FR (700-750 nm) to total photon flux (far-red fraction) is also a reliable predictor of morphological responses like stem length.
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Kusuma P, Swan B, Bugbee B. Does Green Really Mean Go? Increasing the Fraction of Green Photons Promotes Growth of Tomato but Not Lettuce or Cucumber. Plants (Basel) 2021; 10:plants10040637. [PMID: 33801682 PMCID: PMC8066606 DOI: 10.3390/plants10040637] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/09/2021] [Revised: 03/24/2021] [Accepted: 03/25/2021] [Indexed: 06/12/2023]
Abstract
The photon flux in the green wavelength region is relatively enriched in shade and the photon flux in the blue region is selectively filtered. In sole source lighting environments, increasing the fraction of blue typically decreases stem elongation and leaf expansion, and smaller leaves reduce photon capture and yield. Photons in the green region reverse these blue reductions through the photoreceptor cryptochrome in Arabidopsis thaliana, but studies in other species have not consistently shown the benefits of photons in the green region on leaf expansion and growth. Spectral effects can interact with total photon flux. Here, we report the effect of the fraction of photons in the blue (10 to 30%) and green (0 to 50%) regions at photosynthetic photon flux densities of 200 and 500 µmol m-2 s-1 in lettuce, cucumber and tomato. As expected, increasing the fraction of photons in the blue region consistently decreased leaf area and dry mass. By contrast, large changes in the fraction of photons in the green region had minimal effects on leaf area and dry mass in lettuce and cucumber. Photons in the green region were more potent at a lower fraction of photons in the blue region. Photons in the green region increased stem and petiole length in cucumber and tomato, which is a classic shade avoidance response. These results suggest that high-light crop species might respond to the fraction of photons in the green region with either shade tolerance (leaf expansion) or shade avoidance (stem elongation).
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Westmoreland FM, Kusuma P, Bugbee B. Cannabis lighting: Decreasing blue photon fraction increases yield but efficacy is more important for cost effective production of cannabinoids. PLoS One 2021; 16:e0248988. [PMID: 33755709 PMCID: PMC7987162 DOI: 10.1371/journal.pone.0248988] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/26/2021] [Accepted: 03/09/2021] [Indexed: 12/29/2022] Open
Abstract
LED technology facilitates a range of spectral quality, which can be used to optimize photosynthesis, plant shape and secondary metabolism. We conducted three studies to investigate the effect of blue photon fraction on yield and quality of medical hemp. Conditions were varied among studies to evaluate potential interactions with environment, but all environmental conditions other than the blue photon fraction were maintained constant among the five-chambers in each study. The photosynthetic photon flux density (PPFD, 400 to 700 nm) was rigorously maintained at the set point among treatments in each study by raising the fixtures. The lowest fraction of blue photons was 4% from HPS, and increased to 9.8, 10.4, 16, and 20% from LEDs. There was a consistent, linear, 12% decrease in yield in each study as the fraction of blue photons increased from 4 to 20%. Dry flower yield ranged from 500 to 750 g m-2. This resulted in a photon conversion efficacy of 0.22 to 0.36 grams dry flower mass yield per mole of photons. Yield was higher at a PPFD of 900 than at 750 μmol m-2 s-1. There was no effect of spectral quality on CBD or THC concentration. CBD and THC were 8% and 0.3% at harvest in trials one and two, and 12% and 0.5% in trial three. The CBD/THC ratio was about 25 to 1 in all treatments and studies. The efficacy of the fixtures ranged from 1.7 (HPS) to 2.5 μmol per joule (white+red LED). Yield under the white+red LED fixture (10.4% blue) was 4.6% lower than the HPS on a per unit area basis, but was 27% higher on a per dollar of electricity basis. These findings suggest that fixture efficacy and initial cost of the fixture are more important for return on investment than spectral distribution at high photon flux.
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Affiliation(s)
| | - Paul Kusuma
- Crop Physiology Laboratory, Utah State University, Logan, Utah, United States of America
| | - Bruce Bugbee
- Crop Physiology Laboratory, Utah State University, Logan, Utah, United States of America
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16
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Zhen S, Bugbee B. Steady-state stomatal responses of C 3 and C 4 species to blue light fraction: Interactions with CO 2 concentration. Plant Cell Environ 2020; 43:3020-3032. [PMID: 32929764 DOI: 10.1111/pce.13888] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/22/2020] [Accepted: 09/09/2020] [Indexed: 06/11/2023]
Abstract
Blue light induced stomatal opening has been studied by applying a short pulse (~5 to 60 s) of blue light to a background of saturating photosynthetic red photons, but little is known about steady-state stomatal responses. Here we report stomatal responses to blue light at high and low CO2 concentrations. Steady-state stomatal conductance (gs ) of C3 plants increased asymptotically with increasing blue light to a maximum at 20% blue (120 μmol m-2 s-1 ). This response was consistent from 200 to 800 μmol mol-1 atmospheric CO2 (Ca ). In contrast, blue light induced only a transient stomatal opening (~5 min) in C4 species above a Ca of 400 μmol mol-1 . Steady-state gs of C4 plants generally decreased with increasing blue intensity. The net photosynthetic rate of all species decreased above 20% blue because blue photons have lower quantum yield (moles carbon fixed per mole photons absorbed) than red photons. Our findings indicate that photosynthesis, rather than a blue light signal, plays a dominant role in stomatal regulation in C4 species. Additionally, we found that blue light affected only stomata on the illuminated side of the leaf. Contrary to widely held belief, the blue light-induced stomatal opening minimally enhanced photosynthesis and consistently decreased water use efficiency.
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Affiliation(s)
- Shuyang Zhen
- Crop Physiology Laboratory, Department of Plants Soils and Climate, Utah State University, Logan, Utah, USA
| | - Bruce Bugbee
- Crop Physiology Laboratory, Department of Plants Soils and Climate, Utah State University, Logan, Utah, USA
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17
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Zhen S, Bugbee B. Steady-state stomatal responses of C 3 and C 4 species to blue light fraction: Interactions with CO 2 concentration. Plant Cell Environ 2020; 43:1259-1272. [PMID: 32929764 DOI: 10.1111/pce.13730] [Citation(s) in RCA: 67] [Impact Index Per Article: 16.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/23/2019] [Revised: 01/21/2020] [Accepted: 01/22/2020] [Indexed: 05/22/2023]
Abstract
Blue light induced stomatal opening has been studied by applying a short pulse (~5 to 60 s) of blue light to a background of saturating photosynthetic red photons, but little is known about steady-state stomatal responses. Here we report stomatal responses to blue light at high and low CO2 concentrations. Steady-state stomatal conductance (gs ) of C3 plants increased asymptotically with increasing blue light to a maximum at 20% blue (120 μmol m-2 s-1 ). This response was consistent from 200 to 800 μmol mol-1 atmospheric CO2 (Ca ). In contrast, blue light induced only a transient stomatal opening (~5 min) in C4 species above a Ca of 400 μmol mol-1 . Steady-state gs of C4 plants generally decreased with increasing blue intensity. The net photosynthetic rate of all species decreased above 20% blue because blue photons have lower quantum yield (moles carbon fixed per mole photons absorbed) than red photons. Our findings indicate that photosynthesis, rather than a blue light signal, plays a dominant role in stomatal regulation in C4 species. Additionally, we found that blue light affected only stomata on the illuminated side of the leaf. Contrary to widely held belief, the blue light-induced stomatal opening minimally enhanced photosynthesis and consistently decreased water use efficiency.
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Affiliation(s)
- Shuyang Zhen
- Crop Physiology Laboratory, Department of Plants Soils and Climate, Utah State University, Logan, Utah, USA
| | - Bruce Bugbee
- Crop Physiology Laboratory, Department of Plants Soils and Climate, Utah State University, Logan, Utah, USA
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18
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Zhen S, Bugbee B. Substituting Far-Red for Traditionally Defined Photosynthetic Photons Results in Equal Canopy Quantum Yield for CO 2 Fixation and Increased Photon Capture During Long-Term Studies: Implications for Re-Defining PAR. Front Plant Sci 2020; 11:581156. [PMID: 33014004 PMCID: PMC7516038 DOI: 10.3389/fpls.2020.581156] [Citation(s) in RCA: 26] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/08/2020] [Accepted: 08/31/2020] [Indexed: 05/27/2023]
Abstract
Far-red photons regulate shade avoidance responses and can have powerful effects on plant morphology and radiation capture. Recent studies have shown that far-red photons (700 to 750 nm) efficiently drive photosynthesis when added to traditionally defined photosynthetic photons (400-700 nm). But the long-term effects of far-red photons on canopy quantum yield have not yet been determined. We grew lettuce in a four-chamber, steady-state canopy gas-exchange system to separately quantify canopy photon capture, quantum yield for CO2 fixation, and carbon use efficiency. These measurements facilitate a mechanistic understanding of the effect of far-red photons on the components of plant growth. Day-time photosynthesis and night-time respiration of lettuce canopies were continuously monitored from seedling to harvest in five replicate studies. Plants were grown under a background of either red/blue or white light, each background with or without 15% (50 μmol m-2 s-1) of far-red photons substituting for photons between 400 and 700 nm. All four treatments contained 31.5% blue photons, and an equal total photon flux from 400 to 750 nm of 350 μmol m-2 s-1. Both treatments with far-red photons had higher canopy photon capture, increased daily carbon gain (net photosynthesis minus respiration at night), and 29 to 31% more biomass than control treatments. Canopy quantum yield was similar among treatments (0.057 ± 0.002 mol of CO2 fixed in gross photosynthesis per mole of absorbed photons integrated over 400 to 750 nm). Carbon use efficiency (daily carbon gain/gross photosynthesis) was also similar for mature plants (0.61 ± 0.02). Photosynthesis increased linearly with increasing photon capture and had a common slope among all four treatments, which demonstrates that the faster growth with far-red photon substitution was caused by enhanced photon capture through increased leaf expansion. The equivalent canopy quantum yield among treatments indicates that the absorbed far-red photons were equally efficient for photosynthesis when acting synergistically with the 400-700 nm photons.
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19
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Kusuma P, Pattison PM, Bugbee B. From physics to fixtures to food: current and potential LED efficacy. Hortic Res 2020; 7:56. [PMID: 32257242 PMCID: PMC7105460 DOI: 10.1038/s41438-020-0283-7] [Citation(s) in RCA: 42] [Impact Index Per Article: 10.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/30/2019] [Revised: 03/05/2020] [Accepted: 03/09/2020] [Indexed: 05/21/2023]
Affiliation(s)
- Paul Kusuma
- Crop Physiology Laboratory, Utah State University, Logan, 84341 UT USA
| | | | - Bruce Bugbee
- Crop Physiology Laboratory, Utah State University, Logan, 84341 UT USA
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20
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Soundararajan M, Ledbetter R, Kusuma P, Zhen S, Ludden P, Bugbee B, Ensign SA, Seefeldt LC. Phototrophic N 2 and CO 2 Fixation Using a Rhodopseudomonas palustris-H 2 Mediated Electrochemical System With Infrared Photons. Front Microbiol 2019; 10:1817. [PMID: 31474945 PMCID: PMC6705187 DOI: 10.3389/fmicb.2019.01817] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/20/2018] [Accepted: 07/23/2019] [Indexed: 11/13/2022] Open
Abstract
A promising approach for the synthesis of high value reduced compounds is to couple bacteria to the cathode of an electrochemical cell, with delivery of electrons from the electrode driving reductive biosynthesis in the bacteria. Such systems have been used to reduce CO2 to acetate and other C-based compounds. Here, we report an electrosynthetic system that couples a diazotrophic, photoautotrophic bacterium, Rhodopseudomonas palustris TIE-1, to the cathode of an electrochemical cell through the mediator H2 that allows reductive capture of both CO2 and N2 with all of the energy coming from the electrode and infrared (IR) photons. R. palustris TIE-1 was shown to utilize a narrow band of IR radiation centered around 850 nm to support growth under both photoheterotrophic, non-diazotrophic and photoautotrophic, diazotrophic conditions with growth rates similar to those achieved using broad spectrum incandescent light. The bacteria were also successfully cultured in the cathodic compartment of an electrochemical cell with the sole source of electrons coming from electrochemically generated H2, supporting reduction of both CO2 and N2 using 850 nm photons as an energy source. Growth rates were similar to non-electrochemical conditions, revealing that the electrochemical system can fully support bacterial growth. Faradaic efficiencies for N2 and CO2 reduction were 8.5 and 47%, respectively. These results demonstrate that a microbial-electrode hybrid system can be used to achieve reduction and capture of both CO2 and N2 using low energy IR radiation and electrons provided by an electrode.
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Affiliation(s)
- Mathangi Soundararajan
- Department of Chemistry and Biochemistry, Utah State University, Logan, UT, United States
| | - Rhesa Ledbetter
- Department of Biological Sciences, Idaho State University, Pocatello, ID, United States
| | - Paul Kusuma
- Department of Plant, Soils and Climate, Utah State University, Logan, UT, United States
| | - Shuyang Zhen
- Department of Plant, Soils and Climate, Utah State University, Logan, UT, United States
| | - Paul Ludden
- Department of Biology, Southern Methodist University, Dallas, TX, United States
| | - Bruce Bugbee
- Department of Plant, Soils and Climate, Utah State University, Logan, UT, United States
| | - Scott A Ensign
- Department of Chemistry and Biochemistry, Utah State University, Logan, UT, United States
| | - Lance C Seefeldt
- Department of Chemistry and Biochemistry, Utah State University, Logan, UT, United States
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21
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Bugbee B, Bush BW, Gruchalla K, Potter K, Brunhart‐Lupo N, Krishnan V. Enabling immersive engagement in energy system models with deep learning. Stat Anal Data Min 2019. [DOI: 10.1002/sam.11419] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Bruce Bugbee
- Computational Sciences CenterNational Renewable Energy Laboratory Golden Colorado
| | - Brian W. Bush
- Strategic Energy Analysis CenterNational Renewable Energy Laboratory Golden Colorado
| | - Kenny Gruchalla
- Computational Sciences CenterNational Renewable Energy Laboratory Golden Colorado
| | - Kristin Potter
- Computational Sciences CenterNational Renewable Energy Laboratory Golden Colorado
| | | | - Venkat Krishnan
- Power Systems Engineering CenterNational Renewable Energy Laboratory Golden Colorado
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22
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Sagers JK, Waldron BL, Creech JE, Mott IW, Bugbee B. Salinity tolerance of three competing rangeland plant species: Studies in hydroponic culture. Ecol Evol 2018; 7:10916-10929. [PMID: 29299269 PMCID: PMC5743640 DOI: 10.1002/ece3.3607] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2017] [Revised: 10/11/2017] [Accepted: 10/15/2017] [Indexed: 11/16/2022] Open
Abstract
Halogeton (Halogeton glomeratus) is an invasive species that displaces Gardner's saltbush (Atriplex gardneri) on saline rangelands, whereas, forage kochia (Bassia prostrata) potentially can rehabilitate these ecosystems. Salinity tolerance has been hypothesized as the predominant factor affecting frequency of these species. This study compared relative salinity tolerance of these species, and tall wheatgrass (Thinopyrum ponticum) and alfalfa (Medicago sativa). Plants were evaluated in hydroponics, eliminating the confounding effects of drought, for 28 days at 0, 150, 200, 300, 400, 600, and 800 mmol/L NaCl. Survival, growth, and ion accumulation were determined. Alfalfa and tall wheatgrass shoot mass were reduced to 32% of the control at 150 mmol/L. Forage kochia survived to 600 mmol/L, but mass was reduced at all salinity levels. Halogeton and Gardner's saltbush increased or maintained shoot mass up to 400 mmol/L. Furthermore, both actively accumulated sodium in shoots, indicating that Na+ was the principle ion in osmotic adjustment, whereas, forage kochia exhibited passive (linear) Na+ accumulation as salinity increased. This study confirmed the halophytic nature of these three species, but, moreover, discovered that Gardner's saltbush was as saline tolerant as halogeton, whereas, forage kochia was less tolerant. Therefore, factors other than salinity tolerance drive these species’ differential persistence in saline‐desert ecosystems.
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Affiliation(s)
- Joseph K Sagers
- Plants, Soils, and Climate Department Utah State University Logan UT USA
| | - Blair L Waldron
- Forage and Range Research Laboratory USDA Agricultural Research Service Logan UT USA
| | - Joseph Earl Creech
- Plants, Soils, and Climate Department Utah State University Logan UT USA
| | - Ivan W Mott
- Forage and Range Research Laboratory USDA Agricultural Research Service Logan UT USA
| | - Bruce Bugbee
- Plants, Soils, and Climate Department Utah State University Logan UT USA
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23
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Bugbee B, Phillips C, Egan H, Elmore R, Gruchalla K, Purkayastha A. Prediction and characterization of application power use in a high‐performance computing environment. Stat Anal Data Min 2017. [DOI: 10.1002/sam.11339] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Affiliation(s)
- Bruce Bugbee
- Computational Sciences Center National Renewable Energy Laboratory Golden Colorado
| | - Caleb Phillips
- Computational Sciences Center National Renewable Energy Laboratory Golden Colorado
| | - Hilary Egan
- Department of Astrophysical and Planetary Sciences University of Colorado Boulder Colorado
| | - Ryan Elmore
- Department of Business Information and Analytics University of Denver Denver Colorado
| | - Kenny Gruchalla
- Computational Sciences Center National Renewable Energy Laboratory Golden Colorado
| | - Avi Purkayastha
- Computational Sciences Center National Renewable Energy Laboratory Golden Colorado
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24
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Snowden MC, Cope KR, Bugbee B. Sensitivity of Seven Diverse Species to Blue and Green Light: Interactions with Photon Flux. PLoS One 2016; 11:e0163121. [PMID: 27706176 PMCID: PMC5051895 DOI: 10.1371/journal.pone.0163121] [Citation(s) in RCA: 59] [Impact Index Per Article: 7.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2016] [Accepted: 09/03/2016] [Indexed: 11/25/2022] Open
Abstract
Despite decades of research, the effects of spectral quality on plant growth, and development are not well understood. Much of our current understanding comes from studies with daily integrated light levels that are less than 10% of summer sunlight thus making it difficult to characterize interactions between light quality and quantity. Several studies have reported that growth is increased under fluorescent lamps compared to mixtures of wavelengths from LEDs. Conclusions regarding the effect of green light fraction range from detrimental to beneficial. Here we report the effects of eight blue and green light fractions at two photosynthetic photon fluxes (PPF; 200 and 500 μmol m-2 s-1; with a daily light integral of 11.5 and 29 mol m-2 d-1) on growth (dry mass), leaf expansion, stem and petiole elongation, and whole-plant net assimilation of seven diverse plant species. The treatments included cool, neutral, and warm white LEDs, and combinations of blue, green and/or red LEDs. At the higher PPF (500), increasing blue light in increments from 11 to 28% reduced growth in tomato, cucumber, and pepper by 22, 26, and 14% respectively, but there was no statistically significant effect on radish, soybean, lettuce or wheat. At the lower PPF (200), increasing blue light reduced growth only in tomato (41%). The effects of blue light on growth were mediated by changes in leaf area and radiation capture, with minimal effects on whole-plant net-assimilation. In contrast to the significant effects of blue light, increasing green light in increments from 0 to 30% had a relatively small effect on growth, leaf area and net assimilation at either low or high PPF. Surprisingly, growth of three of the seven species was not reduced by a treatment with 93% green light compared to the broad spectrum treatments. Collectively, these results are consistent with a shade avoidance response associated with either low blue or high green light fractions.
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Affiliation(s)
- M. Chase Snowden
- Crop Physiology Laboratory, Department of Plants Soils and Climate, Utah State University, 4820 Old Main Hill, Logan, UT, 84322–4820, United States of America
- * E-mail:
| | - Kevin R. Cope
- Crop Physiology Laboratory, Department of Plants Soils and Climate, Utah State University, 4820 Old Main Hill, Logan, UT, 84322–4820, United States of America
| | - Bruce Bugbee
- Crop Physiology Laboratory, Department of Plants Soils and Climate, Utah State University, 4820 Old Main Hill, Logan, UT, 84322–4820, United States of America
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25
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Parry C, Blonquist JM, Bugbee B. In situ measurement of leaf chlorophyll concentration: analysis of the optical/absolute relationship. Plant Cell Environ 2014; 37:2508-20. [PMID: 24635697 DOI: 10.1111/pce.12324] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/05/2013] [Revised: 02/19/2014] [Accepted: 02/24/2014] [Indexed: 05/11/2023]
Abstract
In situ optical meters are widely used to estimate leaf chlorophyll concentration, but non-uniform chlorophyll distribution causes optical measurements to vary widely among species for the same chlorophyll concentration. Over 30 studies have sought to quantify the in situ/in vitro (optical/absolute) relationship, but neither chlorophyll extraction nor measurement techniques for in vitro analysis have been consistent among studies. Here we: (1) review standard procedures for measurement of chlorophyll; (2) estimate the error associated with non-standard procedures; and (3) implement the most accurate methods to provide equations for conversion of optical to absolute chlorophyll for 22 species grown in multiple environments. Tests of five Minolta (model SPAD-502) and 25 Opti-Sciences (model CCM-200) meters, manufactured from 1992 to 2013, indicate that differences among replicate models are less than 5%. We thus developed equations for converting between units from these meter types. There was no significant effect of environment on the optical/absolute chlorophyll relationship. We derive the theoretical relationship between optical transmission ratios and absolute chlorophyll concentration and show how non-uniform distribution among species causes a variable, non-linear response. These results link in situ optical measurements with in vitro chlorophyll concentration and provide insight to strategies for radiation capture among diverse species.
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Affiliation(s)
- Christopher Parry
- Department of Plants, Soils, and Climate, Utah State University, Logan, UT, 84322, USA
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26
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Nelson JA, Bugbee B. Economic analysis of greenhouse lighting: light emitting diodes vs. high intensity discharge fixtures. PLoS One 2014; 9:e99010. [PMID: 24905835 PMCID: PMC4048233 DOI: 10.1371/journal.pone.0099010] [Citation(s) in RCA: 55] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/03/2014] [Accepted: 05/08/2014] [Indexed: 11/19/2022] Open
Abstract
Lighting technologies for plant growth are improving rapidly, providing numerous options for supplemental lighting in greenhouses. Here we report the photosynthetic (400–700 nm) photon efficiency and photon distribution pattern of two double-ended HPS fixtures, five mogul-base HPS fixtures, ten LED fixtures, three ceramic metal halide fixtures, and two fluorescent fixtures. The two most efficient LED and the two most efficient double-ended HPS fixtures had nearly identical efficiencies at 1.66 to 1.70 micromoles per joule. These four fixtures represent a dramatic improvement over the 1.02 micromoles per joule efficiency of the mogul-base HPS fixtures that are in common use. The best ceramic metal halide and fluorescent fixtures had efficiencies of 1.46 and 0.95 micromoles per joule, respectively. We also calculated the initial capital cost of fixtures per photon delivered and determined that LED fixtures cost five to ten times more than HPS fixtures. The five-year electric plus fixture cost per mole of photons is thus 2.3 times higher for LED fixtures, due to high capital costs. Compared to electric costs, our analysis indicates that the long-term maintenance costs are small for both technologies. If widely spaced benches are a necessary part of a production system, the unique ability of LED fixtures to efficiently focus photons on specific areas can be used to improve the photon capture by plant canopies. Our analysis demonstrates, however, that the cost per photon delivered is higher in these systems, regardless of fixture category. The lowest lighting system costs are realized when an efficient fixture is coupled with effective canopy photon capture.
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Affiliation(s)
- Jacob A. Nelson
- Crop Physiology Laboratory, Department of Plant Soils and Climate, Utah State University, Logan, Utah, United States of America
| | - Bruce Bugbee
- Crop Physiology Laboratory, Department of Plant Soils and Climate, Utah State University, Logan, Utah, United States of America
- * E-mail:
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27
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Adams C, Bugbee B. Nitrogen retention and partitioning at the initiation of lipid accumulation in nitrogen-deficient algae. J Phycol 2014; 50:356-365. [PMID: 26988192 DOI: 10.1111/jpy.12167] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/12/2013] [Accepted: 10/31/2013] [Indexed: 06/05/2023]
Abstract
Nitrogen (N) deficiency promotes lipid accumulation in many oleaginous algae, but we have a poor understanding of the associations between the initiation of lipid accumulation and algal N retention and partitioning. Here, we report on total cell N, five bulk pools of N in the cell (protein, free amino acids, DNA, RNA, chl), and lipids from N saturation to growth cessation in three species. While the maximum level of N uptake differed among species, the ratio of minimum retained N to N retained at the initiation of lipid accumulation was consistent among species at 0.5 ± 0.04. This suggests that the cellular initiation of lipid accumulation was associated with a common magnitude of N deficiency among species. Concerning the partitioning of N, the concentration of RNA and the protein to RNA ratio were most similar among species at the initiation of lipid accumulation with averages of 3.2 ± 0.26 g · L(-1) (8.2% variation) and 16 ± 1.5 (9.2% variation), respectively. All other pools and physiologically relevant ratios were considerably more variable. The species commonalities in RNA and protein show a similar reduction in general cellular function due to N deficiency before cellular initiation of lipid accumulation. These results provide insight into the physiological drivers for lipid accumulation in N-deficient algae and data for modeling these associations.
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Affiliation(s)
- Curtis Adams
- Department of Plants, Soils, and Climate, Utah State University, 4820 Old Main Hill, Logan, Utah, 84322, USA
| | - Bruce Bugbee
- Department of Plants, Soils, and Climate, Utah State University, 4820 Old Main Hill, Logan, Utah, 84322, USA
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28
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Cope KR, Snowden MC, Bugbee B. Photobiological interactions of blue light and photosynthetic photon flux: effects of monochromatic and broad-spectrum light sources. Photochem Photobiol 2014; 90:574-84. [PMID: 24372324 DOI: 10.1111/php.12233] [Citation(s) in RCA: 94] [Impact Index Per Article: 9.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2013] [Accepted: 12/10/2013] [Indexed: 11/28/2022]
Abstract
Photosynthesis (Pn) and photomorphogenesis (Pm) are affected by light quality, light intensity and photoperiod. Although blue light (BL) is necessary for normal development, it is less efficient in driving Pn than other wavelengths of photosynthetically active radiation. The effects of BL on Pm are highly species dependent. Here we report the interacting effects of BL and photosynthetic photon flux (PPF) on growth and development of lettuce, radish and pepper. We used light-emitting diode (LED) arrays to provide BL fractions from 11% to 28% under broad-spectrum white LEDs, and from 0.3% to 92% under monochromatic LEDs. All treatments were replicated three times at each of two PPFs (200 and 500 μmol m(-2) s(-1)). Other than light quality, environmental conditions were uniformly maintained across chambers. Regardless of PPF, BL was necessary to prevent shade-avoidance responses in radish and lettuce. For lettuce and radish, increasing BL reduced stem length, and for both species, there were significant interactions of BL with PPF for leaf expansion. Increasing BL reduced petiole length in radish and flower number in pepper. BL minimally affected pepper growth and other developmental parameters. Pepper seedlings were more photobiologically sensitive than older plants. Surprisingly, there were few interactions between monochromatic and broad-spectrum light sources.
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Affiliation(s)
- Kevin R Cope
- Crop Physiology Laboratory, Department of Plants Soils and Climate, Utah State University, Logan, Utah
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29
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Doucette W, Klein H, Chard J, Dupont R, Plaehn W, Bugbee B. Volatilization of trichloroethylene from trees and soil: measurement and scaling approaches. Environ Sci Technol 2013; 47:5813-5820. [PMID: 23641774 DOI: 10.1021/es304115c] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/02/2023]
Abstract
Trichloroethylene (TCE) volatilization from leaves, trunk, and soil was measured to assess the significance of these pathways from phytoremediation sites at Travis and Fairchild Air Force Bases. Measurements were scaled temporally and spatially to estimate the annual volatilization of TCE at the Travis (0.82 ± 0.51 kg/yr) and Fairchild sites (0.014 ± 0.008 kg/yr). Volatilization was primarily through the leaf (0.34 ± 0.16 kg/yr at Travis and 0.01 ± 0.06 kg/yr at Fairchild) and soil (0.48 ± 0.36 kg/yr at Travis, 0.003 ± 0.002 kg/yr at Fairchild) pathways. The larger volatilization estimate at Travis was expected because of the site's higher TCE groundwater concentrations. Using groundwater data collected in 2004 and 2009, calculations show that over the 5 year period, 1.7 and 0.015 kg of TCE were removed each year at the Travis and Fairchild sites, respectively. On the basis of the scaled field measurements, volatilization from the leaves and soil may play a significant role in TCE removal at both sites. Daily and seasonal variations were not addressed during the limited daytime sampling events, but the methods described here provide a novel and practical framework for evaluating the potential importance of volatilization of TCE and similar compounds at phytoremediation sites.
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Affiliation(s)
- William Doucette
- Utah Water Research Laboratory, Utah State University, 8200 Old Main Hill, Logan, Utah 84322-8200, United States.
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Adams C, Godfrey V, Wahlen B, Seefeldt L, Bugbee B. Understanding precision nitrogen stress to optimize the growth and lipid content tradeoff in oleaginous green microalgae. Bioresour Technol 2013; 131:188-94. [PMID: 23347926 DOI: 10.1016/j.biortech.2012.12.143] [Citation(s) in RCA: 101] [Impact Index Per Article: 9.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/08/2012] [Revised: 12/20/2012] [Accepted: 12/21/2012] [Indexed: 05/08/2023]
Abstract
Nitrogen deficiency promotes lipid formation in many microalgae, but also limits growth and lipid productivity. In spite of numerous studies, there is poor understanding of the interactions of growth and lipid content, the time course of lipid accumulation and the magnitude of nitrogen deficiency required to stimulate lipid formation. These relationships were investigated in six species of oleaginous green algae, comparing high and low levels of deficiency. Nitrogen stress typically had disproportionate effects on growth and lipid content, with profound differences among species. Optimally balancing the tradeoffs required a wide range in nitrogen supply rate among species. Some species grew first and then accumulated lipids, while other species grew and accumulated lipids concurrently which resulted in increased lipid productivity. Accumulation of high lipid content generally resulted from a response to minimal stress. The data highlight the tremendous biodiversity that may be exploited to optimally produce lipids with precision nitrogen stress.
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Affiliation(s)
- Curtis Adams
- Department of Plants, Soils, and Climate, Utah State University, 4820 Old Main Hill, Logan, UT 84322, USA.
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Stoklosa AM, Weiss I, Bugbee B, Perchonok MH, Mauer LJ. Composition and Functional Properties of Apogee and Perigee Compared to Common Terrestrial Wheat Cultivars. International Journal of Food Properties 2011. [DOI: 10.1080/10942910903556447] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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Johnson IR, Thornley JHM, Frantz JM, Bugbee B. A model of canopy photosynthesis incorporating protein distribution through the canopy and its acclimation to light, temperature and CO2. Ann Bot 2010; 106:735-49. [PMID: 20861273 PMCID: PMC2958795 DOI: 10.1093/aob/mcq183] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/05/2023]
Abstract
BACKGROUND AND AIMS The distribution of photosynthetic enzymes, or nitrogen, through the canopy affects canopy photosynthesis, as well as plant quality and nitrogen demand. Most canopy photosynthesis models assume an exponential distribution of nitrogen, or protein, through the canopy, although this is rarely consistent with experimental observation. Previous optimization schemes to derive the nitrogen distribution through the canopy generally focus on the distribution of a fixed amount of total nitrogen, which fails to account for the variation in both the actual quantity of nitrogen in response to environmental conditions and the interaction of photosynthesis and respiration at similar levels of complexity. MODEL A model of canopy photosynthesis is presented for C(3) and C(4) canopies that considers a balanced approach between photosynthesis and respiration as well as plant carbon partitioning. Protein distribution is related to irradiance in the canopy by a flexible equation for which the exponential distribution is a special case. The model is designed to be simple to parameterize for crop, pasture and ecosystem studies. The amount and distribution of protein that maximizes canopy net photosynthesis is calculated. KEY RESULTS The optimum protein distribution is not exponential, but is quite linear near the top of the canopy, which is consistent with experimental observations. The overall concentration within the canopy is dependent on environmental conditions, including the distribution of direct and diffuse components of irradiance. CONCLUSIONS The widely used exponential distribution of nitrogen or protein through the canopy is generally inappropriate. The model derives the optimum distribution with characteristics that are consistent with observation, so overcoming limitations of using the exponential distribution. Although canopies may not always operate at an optimum, optimization analysis provides valuable insight into plant acclimation to environmental conditions. Protein distribution has implications for the prediction of carbon assimilation, plant quality and nitrogen demand.
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Affiliation(s)
- Ian R Johnson
- IMJ Consultants, 127 Rose St, Fitzroy 3065, Melbourne, Victoria, Australia.
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Abstract
The transpiration stream concentration factor (TSCF), the ratio between a compound's concentration in the xylem to that in the solution adjacent to the roots, is commonly used to describe the relative ability of an organic compound to be passively transported from root to shoot. Widely cited bell-shaped curves relating TSCFto the octanol/water partition coefficient (log Kow) imply that significant root uptake and transfer into shoot tissues occurs only for compounds falling within an intermediate hydrophobicity range. However, recent laboratory and field data for relatively water soluble compounds such as sulfolane, methyl tert-butyl ether (MTBE), and 1,4-dioxane suggest that these relationships are not universally applicable, especiallyfor nonionizable, highly polar, water soluble organics. To re-evaluate the relationship between root uptake and chemical hydrophobicity, TSCFs were measured for 25 organic chemicals ranging in log Kow from -0.8 to 5 using a pressure chamber technique. Using the TSCF values measured in this study, a new empirical relationship between TSCF (0 and 1) and log Kow (-0.8 to 5) is presented that indicates that nonionizable, polar, highly water soluble organic compounds are most likely to be taken up by plant roots and translocated to shoot tissue.
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Affiliation(s)
- Erik M Dettenmaier
- Utah Water Research Laboratory, Utah State University, 8200 Old Main Hill, Logan, Utah 84322, USA
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Henry A, Doucette W, Norton J, Bugbee B. Changes in crested wheatgrass root exudation caused by flood, drought, and nutrient stress. J Environ Qual 2007; 36:904-12. [PMID: 17485723 DOI: 10.2134/jeq2006.0425sc] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/15/2023]
Abstract
Root exudates can chelate inorganic soil contaminants, change rhizosphere pH, and may increase degradation of organic contaminants by microbial cometabolism. Root-zone stress may increase exudation and enhance phytoremediation. We studied the effects of low K+, high NH4+/NO3- ratio, drought, and flooding on the quantity and composition of exudates. Crested wheatgrass (Agropyron cristatum) was grown in Ottawa sand in sealed, flow-through glass columns under axenic conditions for 70 d. Root exudates were collected and analyzed for total organic carbon (TOC) and organic acid content to compare treatment effects. Plants in the low K+ treatment exuded 60% more TOC per plant per day (p = 0.01) than the unstressed control. Drought stress increased cumulative TOC exuded per gram dry plant by 71% (p = 0.05). The flooded treatment increased TOC exuded per gram dry plant by 45%, although this was not statistically significant based on the two replicate plants in this treatment. Exudation from the high NH4+/NO3- ratio treatment was 10% less than the control. Exudation rates in this study ranged from 8 to 50% of rates in four other published studies. Gas chromatography-mass spectrometry (GC-MS) analysis indicated that malic acid was the predominant organic acid exuded. Fumaric, malonic, succinic, and oxalic acids were also detected in the exudates of all treatments. These results demonstrate that nutrient and water stress have significant effects on the quantity and composition of root exudates. Cultural manipulations to induce stress may change the quantity of root exudates and thus increase the effectiveness of phytoremediation.
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Affiliation(s)
- Amelia Henry
- Dep. of Plants, Soils, and Biometeorology, Utah State Univ., Logan UT 84321, USA
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Chard BK, Doucette WJ, Chard JK, Bugbee B, Gorder K. Trichloroethylene uptake by apple and peach trees and transfer to fruit. Environ Sci Technol 2006; 40:4788-93. [PMID: 16913140 DOI: 10.1021/es060156k] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/11/2023]
Abstract
A greenhouse study was conducted to quantify 14C-trichloroethylene (TCE) uptake and transfer into the edible fruit of apple and peach trees. Trees were subsurface irrigated with solutions of 14C [TCE] that bracketed groundwater concentrations (5 and 500 microg/L) found in residential areas surrounding Hill Air Force Base, UT, where trace amounts of TCE had been found in several fruits during a preliminary field survey. Nondosed control trees were grown within the canopy of the dosed trees and in a separate greenhouse. Tissue samples were analyzed for 14C and TCE using combustion/liquid scintillation counting (LSC) and headspace/gas chromatography/mass spectrometry (HS/GC/MS). Tissue was also extracted and analyzed by GC/MS for dichloroacetic acid (DCAA), trichloroacetic acid (TCAA), and trichloroethanol (TCEt), three specific TCE metabolites that have been previously identified in laboratory and field studies. No 14C was detected in the nonexposed control trees. Exposed trees contained levels of 14C that were proportional to the exposure concentration. 14C concentrations were greatest in leaves followed by branches and fruits. At the end of the study, TCE was detected only in roots implying that the 14C in the leaves, branches, and fruit was associated with unidentified nonvolatile TCE transformation products and/or is nonextractable. However, TCAA and DCAA were positively identified only in leaves collected during the first year from an apple tree exposed to the high dose treatment. Additional data for other chemicals and fruittrees are needed to better understand the potential transfer of organic compounds to edible fruit.
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Affiliation(s)
- Brandon K Chard
- Utah State University, Utah Water Research Laboratory, 8200 Old Main Hill, Logan, Utah 84322-8200, USA
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Henry A, Doucette W, Norton J, Jones S, Chard J, Bugbee B. An axenic plant culture system for optimal growth in long-term studies. J Environ Qual 2006; 35:590-8. [PMID: 16510704 DOI: 10.2134/jeq2005.0127] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/06/2023]
Abstract
The symbiotic co-evolution of plants and microbes leads to difficulties in understanding which of the two components is responsible for a given environmental response. Plant-microbe studies greatly benefit from the ability to grow plants in axenic (sterile) culture. Several studies have used axenic plant culture systems, but experimental procedures are often poorly documented, the plant growth environment is not optimal, and axenic conditions are not rigorously verified. We developed a unique axenic system using inert components that promotes plant health and can be kept sterile for at least 70 d. Crested wheatgrass (Agropyron cristatum cv. CDII) plants were grown in sand within flow-through glass columns that were positively pressured with filtered air. Plant health was optimized by regulating temperature, light level, CO2 concentration, humidity, and nutrients. The design incorporates several novel aspects, such as pretreatment of the sand with Fe, graduated sand layers to optimize the air-water balance of the root zone, and modification of a laminar flow hood to serve as a plant growth chamber. Adaptations of several sterile techniques were necessary for maintenance of axenic conditions. Axenic conditions were verified by plating and staining leachates as well as a rhizoplane stain. This system was designed to study nutrient and water stress effects on root exudates, but is useful for assessing a broad range of plant-microbe-environment interactions. Based on total organic C analysis, 74% of exudates was recovered in the leachate, 6% was recovered in the bulk sand, and 17% was recovered in the rhizosphere sand. Carbon in the leachate after 70 d reached 255 microg d(-1). Fumaric, malic, malonic, oxalic, and succinic acids were measured as components of the root exudates.
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Affiliation(s)
- Amelia Henry
- Department of Plants, Soils, and Biometeorology, Utah State University, Logan, UT 84322, USA
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Doucette WJ, Wheeler BR, Chard JK, Bugbee B, Naylor CG, Carbone JP, Sims RC. Uptake of nonylphenol and nonylphenol ethoxylates by crested wheatgrass. Environ Toxicol Chem 2005; 24:2965-72. [PMID: 16398135 DOI: 10.1897/05-171r.1] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/06/2023]
Abstract
Nonylphenol (NP) and other hydrophobic biodegradation intermediates of nonylphenol ethoxylate (NPE) surfactants have been identified in wastewater treatment biosolids. These biosolids often are land applied, but little is known regarding the potential uptake of biosolid-derived contaminants by plants. Hydroponic experiments, 11 to 14 weeks in duration, were conducted to examine the uptake and translocation of 14C and unlabeled NP, nonylphenol tetraethoxylate (NPE4), and nonylphenol nonylethoxylate (NPE9) by crested wheatgrass (Agropyron cristatum). Phenol also was evaluated for comparison. Plant tissue was analyzed for 14C and for the parent compounds. Volatilization from the hydroponic system and rhizosphere mineralization also were quantified. At the conclusion of the study, most of the plant-associated 14C was found in the roots (NP = 98%, NPE4 = 92%, and NPE9 = 81%). Concentrations of 14C in the foliar tissue ranged from 0.002 to 0.045 mg-equivalent per kg (dry wt), but no parent compounds were detected, implying that the 14C was unextractable or in the form of metabolites. Transpiration stream concentration factors for NP, NPE4, and NPE9, calculated assuming the 14C was parent compound, were 0.012, 0.032, and 0.066, respectively. Little mineralization was observed for NP, NPE4, and NPE9 in the hydroponic system; however, for phenol, 16 to 30% of the added 14C was mineralized.
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Affiliation(s)
- William J Doucette
- Utah State University, Utah Water Research Laboratory, 8200 Old Main Hill, Logan, Utah 84322-8200, USA.
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Klassen SP, Bugbee B. Ethylene synthesis and sensitivity in crop plants. HortScience 2004; 39:1546-1552. [PMID: 15770791] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
Closed and semi-closed plant growth chambers have long been used in studies of plant and crop physiology. These studies include the measurement of photosynthesis and transpiration via photosynthetic gas exchange. Unfortunately, other gaseous products of plant metabolism can accumulate in these chambers and cause artifacts in the measurements. The most important of these gaseous byproducts is the plant hormone ethylene (C2H4). In spite of hundreds of manuscripts on ethylene, we still have a limited understanding of the synthesis rates throughout the plant life cycle. We also have a poor understanding of the sensitivity of intact, rapidly growing plants to ethylene. We know ethylene synthesis and sensitivity are influenced by both biotic and abiotic stresses, but such whole plant responses have not been accurately quantified. Here we present an overview of basic studies on ethylene synthesis and sensitivity.
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Affiliation(s)
- Stephen P Klassen
- Crop Physiology Laboratory, Department of Plants, Soils and Biometeorology, Utah State University, Logan, UT 84322-4820, USA
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Abstract
BACKGROUND AND AIMS Carbon gain depends on efficient photosynthesis and adequate respiration. The effect of temperature on photosynthetic efficiency is well understood. In contrast, the temperature response of respiration is based almost entirely on short-term (hours) measurements in mature organisms to develop Q(10) values for maintenance and whole-plant respiration. These Q(10) values are then used to extrapolate across whole life cycles to predict the influence of temperature on plant growth. METHODS In this study, night temperature in young, rapidly growing plant communities was altered from 17 to 34 degrees C for up to 20 d. Day temperature was maintained at 25 degrees C. CO(2) gas-exchange was continuously monitored in ten separate chambers to quantify the effect of night-temperature on respiration, photosynthesis and the efficiency of carbon gain (carbon use efficiency). KEY RESULTS Respiration increased only 20-46 % for each 10 degrees C rise in temperature (total respiratory Q(10) of between 1.2 to about 1.5). This change resulted in only a 2-12 % change in carbon use efficiency, and there was no effect on cumulative carbon gain or dry mass. No acclimation of respiration was observed after 20 d of treatment. CONCLUSIONS These findings indicate that whole-plant respiration of rapidly growing plants has a small sensitivity to temperature, and that the sensitivity does not change among the species tested, even after 20 d of treatment. Finally, the results support respiration models that separate respiration into growth and maintenance components.
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Affiliation(s)
- Jonathan M Frantz
- Crop Physiology Laboratory, Department of Plants, Soils and Biometeorology, Utah State University, Logan, UT 84322-4820, USA.
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Frantz JM, Ritchie G, Cometti NN, Robinson J, Bugbee B. Exploring the limits of crop productivity: beyond the limits of tipburn in lettuce. J Am Soc Hortic Sci 2004; 129:331-8. [PMID: 15776542] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 12/16/2023]
Abstract
The productivity of lettuce in a combination of high light, high temperature, and elevated CO2 has not been commonly studied because rapid growth usually causes a calcium deficiency in meristems called tipburn, which greatly reduces quality and marketability. We eliminated tipburn by blowing air directly onto the meristem, which allowed us to increase the photosynthetic photon flux (PPF) to 1000 micromoles m-2 s-1 (57.6 mol m-2 d-1); two to three times higher than normally used for lettuce. Eliminating tipburn doubled edible yield at the highest PPF level. In addition to high PPF, CO2 was elevated to 1200 micromoles m-2 mol-1, which increased the temperature optimum from 25 to 30 degrees C. The higher temperature increased leaf expansion rate, which improved radiation capture and more than doubled yield. Photosynthetic efficiency, measured as canopy quantum yield in a whole-plant gas exchange system, steadily increased up to the highest temperature of 32 degrees C in high CO2. The highest productivity was 19 g m-2 d-1 of dry biomass (380 g d-1 fresh mass) averaged over the 23 days the plants received light. Without the limitation of tipburn, the combination of high PPF, high temperature, and elevated CO2 resulted in a 4-fold increase in growth rate over productivity in conventional environments.
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Affiliation(s)
- Jonathan M Frantz
- Crop Physiology Laboratory, Department of Plants, Soils, and Biometeorology, Utah State University, Logan, UT 84322-4820, USA. Jonathan.
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43
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Abstract
The productivity of lettuce in a combination of high light, high temperature, and elevated CO2 has not been commonly studied because rapid growth usually causes a calcium deficiency in meristems called tipburn, which greatly reduces quality and marketability. We eliminated tipburn by blowing air directly onto the meristem, which allowed us to increase the photosynthetic photon flux (PPF) to 1000 micromoles m-2 s-1 (57.6 mol m-2 d-1); two to three times higher than normally used for lettuce. Eliminating tipburn doubled edible yield at the highest PPF level. In addition to high PPF, CO2 was elevated to 1200 micromoles m-2 mol-1, which increased the temperature optimum from 25 to 30 degrees C. The higher temperature increased leaf expansion rate, which improved radiation capture and more than doubled yield. Photosynthetic efficiency, measured as canopy quantum yield in a whole-plant gas exchange system, steadily increased up to the highest temperature of 32 degrees C in high CO2. The highest productivity was 19 g m-2 d-1 of dry biomass (380 g d-1 fresh mass) averaged over the 23 days the plants received light. Without the limitation of tipburn, the combination of high PPF, high temperature, and elevated CO2 resulted in a 4-fold increase in growth rate over productivity in conventional environments.
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Affiliation(s)
- Jonathan M Frantz
- Crop Physiology Laboratory, Department of Plants, Soils, and Biometeorology, Utah State University, Logan, UT 84322-4820, USA. Jonathan.
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Abstract
Ethylene (C2H4) gas is produced throughout the life cycle of plants and can accumulate in closed growth chambers to levels 100 times higher than in outside environments. Elevated atmospheric C2H4 can cause a variety of abnormal responses, but the sensitivity to elevated C2H4 is not well characterized. We evaluated the C2H4 sensitivity of wheat (Triticum aestivum L.) and rice (Oryza sativa L.) in five studies. The first three studies compared the effects of continuous C2H4 levels ranging from 0 to 1000 nmol mol-1 (ppb) in a growth chamber throughout the life cycle of the plants. A short-term 1000 nmol mol-1 treatment was included in which exposure was stopped at anthesis. Yield was reduced by 36% in wheat and 63% in rice at 50 nmol mol-1 and both species were virtually sterile when continuously exposed to 1000 nmol mol-1. However, the yield reductions were much less with exposure that stopped at anthesis, suggesting the detrimental effect of C2H4 on yield was greatest around the time of seed set. Two additional studies evaluated the differential sensitivity of two wheat cultivars (Super Dwarf and USU-Apogee) to 50 nmol mol-1 C2H4 at three CO2 levels [350, 1200, 5000 micromoles mol-1 (ppm)] in a greenhouse. Yield of USU-Apogee was not significantly reduced by C2H4 but the yield of Super Dwarf was reduced by 60%. Elevated CO2 did not influence the sensitivity to C2H4. A difference in the C2H4 sensitivity of USU-Apogee between greenhouse and growth chamber trials suggests that C2H4 sensitivity is dependent on the environment. Collectively, the data suggest that relatively low levels of C2H4 could induce anomalous plant responses by accumulation in greenhouses and growth chambers with inadequate ventilation. The data also suggest that C2H4 sensitivity can be reduced by both genetic and environmental manipulations.
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Affiliation(s)
- Stephen P Klassen
- Crop Physiology Laboratory, Dep. of Plants, Soils and Biometeorology, Utah State Univ., Logan, UT 84322-4820, USA
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Frantz JM, Bugbee B. Anaerobic conditions improve germination of a gibberellic acid deficient rice. Crop Sci 2002; 42:651-654. [PMID: 14552358 DOI: 10.2135/cropsci2002.0651] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
Dwarf plants are useful in research because multiple plants can be grown in a small area. Rice (Oryza sativa L.) is especially important since its relatively simple genome has recently been sequenced. We are characterizing a gibberellic acid (GA) mutant of rice (japonica cv 'Shiokari,' line N-71) that is extremely dwarf (20 cm tall). Unfortunately, this GA mutation is associated with poor germination (70%) under aerobic conditions. Neither exogenous GA nor a dormancy-breaking heat treatment improved germination. However, 95% germination was achieved by germinating the seeds anaerobically, either in a pure N2 environment or submerged in unstirred tap water. The anaerobic conditions appear to break a mild post-harvest dormancy in this rice cultivar.
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Affiliation(s)
- Jonathan M Frantz
- Dep. of Plants, Soils, and Biometeorology, Utah State Univ., Logan, UT 84322-4820, USA
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Tubiello F, Volk T, Bugbee B. Diffuse light and wheat radiation-use efficiency in a controlled environment. Life Support Biosph Sci 2001; 4:77-85. [PMID: 11540456] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 02/21/2023]
Abstract
Radiation-use efficiency (dry matter produced per unit absorbed radiation) of a spring wheat (Triticum aestivum L., cv. Veery-10) was 40% higher in controlled growth chamber experiments than under optimal field conditions. Simulations with CERES-Wheat, a field model modified to account for growth chamber conditions, suggest that the observed increase in radiation-use efficiency was due to the large fraction of diffuse light in the experimental chamber. Under optimal conditions in the field, the highest crop growth rates occur when the daily photosynthetic photon flux (PPF) is at its highest levels (50-60 mol m-2 d-1). However, these high growth rates do not appear to be associated with the highest radiation-use efficiency. High PPF levels in the field occur on clear days when the fraction of direct radiation is high and the diffuse fraction is low. In controlled environments with reflective walls, high PPF levels with a large fraction of diffuse radiation can be obtained. Diffuse radiation penetrates to the lower leaves of a canopy better than direct radiation, with the result that the upper leaves are less light saturated and the lower leaves receive more light, increasing radiation-use efficiency, and thus growth rates. The data and model simulations presented here suggest that when diffuse light is a high fraction of the total PPF crop productivity can exceed the highest values attainable in the field under optimal conditions.
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Affiliation(s)
- F Tubiello
- Center for Climate Systems Research, Columbia University, New York 10025, USA.
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Volk T, Bugbee B, Wheeler RM. An approach to crop modeling with the energy cascade. Life Support Biosph Sci 2001; 1:119-27. [PMID: 11538584] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 02/21/2023]
Abstract
Use of plants in advanced life support requires models of crop growth to analyze data, to evaluate areas for improvement, and, for design and engineering, to predict the gas exchanges of crops. We used data from experiments at Utah State University and the Kennedy Space Center for wheat (Triticum aestivum L.) and examined it for time dependence of the major three components in the energy cascade: photosynthetic photon absorption, canopy quantum yield, and carbon use efficiency. From the Utah State data, we developed a model with a total of five trends: absorption increasing until canopy closure, then constant; quantum yield as constant, then decreasing during senescence; carbon use as constant. This system probably is the lower limit of simplicity to which a model can be reduced and yet provide substantial utility. We demonstrated this utility by using the model to predict photosynthesis and respiration for experiments at Kennedy Space Center. The most uncertainty arose in predicting a start time for the senescent decrease of canopy quantum yield. The model should be generally applicable to other crops grown in controlled environments, as a generic tool for the design of life support systems.
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Affiliation(s)
- T Volk
- Department of Biology, New York University 10003-7599, USA
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Smart D, Ritchie K, Bugbee B. Mass transfer in the biological fast lane: high CO2 and a shallow root zone. Life Support Biosph Sci 2001; 3:43-6. [PMID: 11539159] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 02/21/2023]
Abstract
Elevated atmospheric CO2, which is common in regenerative systems, increases photosynthesis, plant growth, and root respiration, which increases the O2 demand in the root zone. Closed systems must make efficient use of volume and thus have shallow root zones. The root density and O2 demand in these artificial systems is 10 to 100 times higher than in field environments. Rapid hydroponic flow rates supply O2 to the root zone, but anaerobic microsites occur because of nonuniform flow rates. Our measurements suggest that, probably because of low O2 in such microsites, up to 30% of the nitrogen can volatilize from denitrification. We improved nitrogen recovery to about 85% by increasing the solution flow rate and reducing the nitrate concentration in solution to 100 micromoles.
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Affiliation(s)
- D Smart
- Department of Plants, Soils, and Biometeorology, Utah State University, Logan 84322-4820, USA
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Bugbee B, Salisbury FB. Wheat production in the controlled environments of space. Utah Sci 2001; 46:145-51. [PMID: 11540895] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 02/21/2023]
Affiliation(s)
- B Bugbee
- Plant Science Department, Utah State University, USA
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Volk T, Bugbee B, Tubiello F. Phasic temperature control appraised with the Ceres-Wheat model. Life Support Biosph Sci 2001; 4:49-54. [PMID: 11540452] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 02/21/2023]
Abstract
Phasic control refers to the specification of a series of different environmental conditions during a crop's life cycle, with the goal of optimizing some aspect of productivity. Because of the enormous number of possible scenarios, phasic control is an ideal situation for modeling to provide guidance prior to experiments. Here we use the Ceres-Wheat model, modified for hydroponic growth chambers, to examine temperature effects. We first establish a baseline by running the model at constant temperatures from 10 degrees C to 30 degrees C. Grain yield per day peaks at 15 degrees C at a value that is 25% higher than the yield at the commonly used 23 degrees C. We then show results for phasic control limited to a single shift in temperature and, finally, we examine scenarios that allow each of the five phases of the life cycle to have a different temperature. Results indicate that grain yield might be increased by 15-20% over the best yield at constant temperature, primarily from a boosted harvest index, which has the additional advantage of less waste biomass. Such gains, if achievable, would help optimize food production for life support systems. Experimental work should first verify the relationship between yield and temperature, and then move to selected scenarios of phasic control, based on model predictions.
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Affiliation(s)
- T Volk
- Department of Biology, New York University 10003, USA.
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