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Crowe JD, Hao P, Pattathil S, Pan H, Ding SY, Hodge DB, Jensen JK. Xylan Is Critical for Proper Bundling and Alignment of Cellulose Microfibrils in Plant Secondary Cell Walls. Front Plant Sci 2021; 12:737690. [PMID: 34630488 PMCID: PMC8495263 DOI: 10.3389/fpls.2021.737690] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/07/2021] [Accepted: 08/24/2021] [Indexed: 05/07/2023]
Abstract
Plant biomass represents an abundant and increasingly important natural resource and it mainly consists of a number of cell types that have undergone extensive secondary cell wall (SCW) formation. These cell types are abundant in the stems of Arabidopsis, a well-studied model system for hardwood, the wood of eudicot plants. The main constituents of hardwood include cellulose, lignin, and xylan, the latter in the form of glucuronoxylan (GX). The binding of GX to cellulose in the eudicot SCW represents one of the best-understood molecular interactions within plant cell walls. The evenly spaced acetylation and 4-O-methyl glucuronic acid (MeGlcA) substitutions of the xylan polymer backbone facilitates binding in a linear two-fold screw conformation to the hydrophilic side of cellulose and signifies a high level of molecular specificity. However, the wider implications of GX-cellulose interactions for cellulose network formation and SCW architecture have remained less explored. In this study, we seek to expand our knowledge on this by characterizing the cellulose microfibril organization in three well-characterized GX mutants. The selected mutants display a range of GX deficiency from mild to severe, with findings indicating even the weakest mutant having significant perturbations of the cellulose network, as visualized by both scanning electron microscopy (SEM) and atomic force microscopy (AFM). We show by image analysis that microfibril width is increased by as much as three times in the severe mutants compared to the wild type and that the degree of directional dispersion of the fibrils is approximately doubled in all the three mutants. Further, we find that these changes correlate with both altered nanomechanical properties of the SCW, as observed by AFM, and with increases in enzymatic hydrolysis. Results from this study indicate the critical role that normal GX composition has on cellulose bundle formation and cellulose organization as a whole within the SCWs.
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Affiliation(s)
- Jacob D. Crowe
- Department of Chemical Engineering & Materials Science, Michigan State University, East Lansing, MI, United States
| | - Pengchao Hao
- Department of Chemistry, Michigan State University, East Lansing, MI, United States
| | - Sivakumar Pattathil
- Complex Carbohydrate Research Center, The University of Georgia, Athens, GA, United States
| | - Henry Pan
- Department of Chemical Engineering, University of Texas, Austin, TX, United States
| | - Shi-You Ding
- Department of Plant Biology, Michigan State University, East Lansing, MI, United States
- Department of Energy Great Lakes Bioenergy Research Center, Michigan State University, East Lansing, MI, United States
| | - David B. Hodge
- Department of Chemical & Biological Engineering, Montana State University, Bozeman, MT, United States
| | - Jacob Krüger Jensen
- Section for Plant Glycobiology, Department of Plant and Environmental Sciences, University of Copenhagen, Copenhagen, Denmark
- *Correspondence: Jacob Krüger Jensen
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Crowe JD, Li M, Williams DL, Smith AD, Liu T, Hodge DB. Alkaline and Alkaline-Oxidative Pretreatment and Hydrolysis of Herbaceous Biomass for Growth of Oleaginous Microbes. Methods Mol Biol 2020; 1995:173-182. [PMID: 31148129 DOI: 10.1007/978-1-4939-9484-7_11] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]
Abstract
This chapter describes methods for generation of hydrolysates amenable to conversion to microbial lipids from herbaceous lignocellulosic biomass utilizing either mild alkali pretreatment with NaOH or alkaline hydrogen peroxide pretreatment with NaOH and H2O2. This pretreatment is followed by enzymatic hydrolysis of the plant cell wall polysaccharides to yield hydrolysates. These hydrolysates are composed primarily of the monosaccharides glucose and xylose as well as acetate and phenolic monomers that may all serve as a source of renewable carbon to produce microbial lipids. Application of these mild pretreatment conditions minimizes the generation of inhibitors, enabling microbial cultivations to often be performed without the need for detoxification.
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Affiliation(s)
- Jacob D Crowe
- Department of Chemical Engineering and Materials Science, Michigan State University, East Lansing, MI, USA
| | - Muyang Li
- Department of Agricultural and Biological Engineering, Michigan State University, East Lansing, MI, USA
| | | | - Alex D Smith
- Department of Chemical and Biological Engineering, University of Wisconsin, Madison, WI, USA
| | - Tongjun Liu
- Department of Bioengineering, Qilu University of Technology, Jinan, China
| | - David B Hodge
- Department of Chemical and Biological Engineering, Montana State University, Bozeman, MN, USA. .,Department of Civil, Environmental, and Natural Resources Engineering, Luleå University of Technology, Luleå, Sweden.
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Williams DL, Crowe JD, Ong RG, Hodge DB. Water sorption in pretreated grasses as a predictor of enzymatic hydrolysis yields. Bioresour Technol 2017; 245:242-249. [PMID: 28892697 DOI: 10.1016/j.biortech.2017.08.200] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/05/2017] [Revised: 08/29/2017] [Accepted: 08/30/2017] [Indexed: 05/05/2023]
Abstract
This work investigated the impact of two alkaline pretreatments, ammonia fiber expansion (AFEX) and alkaline hydrogen peroxide (AHP) delignification performed over a range of conditions on the properties of corn stover and switchgrass. Changes in feedstock properties resulting from pretreatment were subsequently compared to enzymatic hydrolysis yields to examine the relationship between enzymatic hydrolysis and cell wall properties. The pretreatments function to increase enzymatic hydrolysis yields through different mechanisms; AFEX pretreatment through lignin relocalization and some xylan solubilization and AHP primarily through lignin solubilization. An important outcome of this work demonstrated that while changes in lignin content in AHP-delignified biomass could be clearly correlated to improved response to hydrolysis, compositional changes alone in AFEX-pretreated biomass could not explain differences in hydrolysis yields. We determined the water retention value, which characterizes the association of water with the cell wall of the pretreated biomass, can be used to predict hydrolysis yields for all pretreated biomass within this study.
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Affiliation(s)
- Daniel L Williams
- Department of Chemical Engineering & Materials Science, Michigan State University, East Lansing, MI, USA; DOE Great Lakes Bioenergy Research Center, Michigan State University, East Lansing, MI, USA
| | - Jacob D Crowe
- Department of Chemical Engineering & Materials Science, Michigan State University, East Lansing, MI, USA
| | - Rebecca G Ong
- Department of Chemical Engineering, Michigan Technological University, Houghton, MI, USA
| | - David B Hodge
- Department of Chemical Engineering & Materials Science, Michigan State University, East Lansing, MI, USA; DOE Great Lakes Bioenergy Research Center, Michigan State University, East Lansing, MI, USA; Department Biosystems & Agricultural Engineering, Michigan State University, East Lansing, MI, USA; Division of Chemical Engineering. Luleå University of Technology, SE-971 87 Luleå, Sweden.
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Crowe JD, Zarger RA, Hodge DB. Relating Nanoscale Accessibility within Plant Cell Walls to Improved Enzyme Hydrolysis Yields in Corn Stover Subjected to Diverse Pretreatments. J Agric Food Chem 2017; 65:8652-8662. [PMID: 28876068 DOI: 10.1021/acs.jafc.7b03240] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
Abstract
Simultaneous chemical modification and physical reorganization of plant cell walls via alkaline hydrogen peroxide or liquid hot water pretreatment can alter cell wall structural properties impacting nanoscale porosity. Nanoscale porosity was characterized using solute exclusion to assess accessible pore volumes, water retention value as a proxy for accessible water-cell walls surface area, and solute-induced cell wall swelling to measure cell wall rigidity. Key findings concluded that delignification by alkaline hydrogen peroxide pretreatment decreased cell wall rigidity and that the subsequent cell wall swelling resulted increased nanoscale porosity and improved enzyme binding and hydrolysis compared to limited swelling and increased accessible surface areas observed in liquid hot water pretreated biomass. The volume accessible to a 90 Å dextran probe within the cell wall was found to be correlated to both enzyme binding and glucose hydrolysis yields, indicating cell wall porosity is a key contributor to effective hydrolysis yields.
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Affiliation(s)
| | | | - David B Hodge
- Department of Civil, Environmental and Natural Resources Engineering, Luleå University of Technology , Luleå 97187, Sweden
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Crowe JD, Feringa N, Pattathil S, Merritt B, Foster C, Dines D, Ong RG, Hodge DB. Identification of developmental stage and anatomical fraction contributions to cell wall recalcitrance in switchgrass. Biotechnol Biofuels 2017; 10:184. [PMID: 28725264 PMCID: PMC5512841 DOI: 10.1186/s13068-017-0870-5] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/26/2017] [Accepted: 07/06/2017] [Indexed: 05/08/2023]
Abstract
BACKGROUND Heterogeneity within herbaceous biomass can present important challenges for processing feedstocks to cellulosic biofuels. Alterations to cell wall composition and organization during plant growth represent major contributions to heterogeneity within a single species or cultivar. To address this challenge, the focus of this study was to characterize the relationship between composition and properties of the plant cell wall and cell wall response to deconstruction by NaOH pretreatment and enzymatic hydrolysis for anatomical fractions (stem internodes, leaf sheaths, and leaf blades) within switchgrass at various tissue maturities as assessed by differing internode. RESULTS Substantial differences in both cell wall composition and response to deconstruction were observed as a function of anatomical fraction and tissue maturity. Notably, lignin content increased with tissue maturity concurrently with decreasing ferulate content across all three anatomical fractions. Stem internodes exhibited the highest lignin content as well as the lowest hydrolysis yields, which were inversely correlated to lignin content. Confocal microscopy was used to demonstrate that removal of cell wall aromatics (i.e., lignins and hydroxycinnamates) by NaOH pretreatment was non-uniform across diverse cell types. Non-cellulosic polysaccharides were linked to differences in cell wall response to deconstruction in lower lignin fractions. Specifically, leaf sheath and leaf blade were found to have higher contents of substituted glucuronoarabinoxylans and pectic polysaccharides. Glycome profiling demonstrated that xylan and pectic polysaccharide extractability varied with stem internode maturity, with more mature internodes requiring harsher chemical extractions to remove comparable glycan abundances relative to less mature internodes. While enzymatic hydrolysis was performed on extractives-free biomass, extractible sugars (i.e., starch and sucrose) comprised a significant portion of total dry weight particularly in stem internodes, and may provide an opportunity for recovery during processing. CONCLUSIONS Cell wall structural differences within a single plant can play a significant role in feedstock properties and have the potential to be exploited for improving biomass processability during a biorefining process. The results from this work demonstrate that cell wall lignin content, while generally exhibiting a negative correlation with enzymatic hydrolysis yields, is not the sole contributor to cell wall recalcitrance across diverse anatomical fractions within switchgrass.
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Affiliation(s)
- Jacob D. Crowe
- Department of Chemical Engineering and Materials Science, Michigan State University, East Lansing, MI USA
| | - Nicholas Feringa
- Department of Chemical Engineering and Materials Science, Michigan State University, East Lansing, MI USA
| | - Sivakumar Pattathil
- Complex Carbohydrate Research Center, University of Georgia, Athens, GA USA
- Bioenergy Science Center, Oak Ridge National Laboratory, Oak Ridge, TN USA
| | - Brian Merritt
- Complex Carbohydrate Research Center, University of Georgia, Athens, GA USA
| | - Cliff Foster
- DOE-Great Lakes Bioenergy Research Center, Michigan State University, East Lansing, MI USA
| | - Dayna Dines
- DOE-Great Lakes Bioenergy Research Center, Michigan State University, East Lansing, MI USA
| | - Rebecca G. Ong
- Department of Chemical Engineering, Michigan Technological University, Houghton, MI USA
| | - David B. Hodge
- Department of Chemical Engineering and Materials Science, Michigan State University, East Lansing, MI USA
- DOE-Great Lakes Bioenergy Research Center, Michigan State University, East Lansing, MI USA
- Department of Biosystems & Agricultural Engineering, Michigan State University, East Lansing, MI USA
- Department of Civil, Environmental and Natural Resources Engineering, Luleå University of Technology, Luleå, Sweden
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Li M, Heckwolf M, Crowe JD, Williams DL, Magee TD, Kaeppler SM, de Leon N, Hodge DB. Cell-wall properties contributing to improved deconstruction by alkaline pre-treatment and enzymatic hydrolysis in diverse maize (Zea mays L.) lines. J Exp Bot 2015; 66:4305-15. [PMID: 25871649 PMCID: PMC4493778 DOI: 10.1093/jxb/erv016] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/05/2023]
Abstract
A maize (Zea mays L. subsp. mays) diversity panel consisting of 26 maize lines exhibiting a wide range of cell-wall properties and responses to hydrolysis by cellulolytic enzymes was employed to investigate the relationship between cell-wall properties, cell-wall responses to mild NaOH pre-treatment, and enzymatic hydrolysis yields. Enzymatic hydrolysis of the cellulose in the untreated maize was found to be positively correlated with the water retention value, which is a measure of cell-wall susceptibility to swelling. It was also positively correlated with the lignin syringyl/guaiacyl ratio and negatively correlated with the initial cell-wall lignin, xylan, acetate, and p-coumaric acid (pCA) content, as well as pCA released from the cell wall by pre-treatment. The hydrolysis yield following pre-treatment exhibited statistically significant negative correlations to the lignin content after pre-treatment and positive correlations to the solubilized ferulic acid and pCA. Several unanticipated results were observed, including a positive correlation between initial lignin and acetate content, lack of correlation between acetate content and initial xylan content, and negative correlation between each of these three variables to the hydrolysis yields for untreated maize. Another surprising result was that pCA release was negatively correlated with hydrolysis yields for untreated maize and, along with ferulic acid release, was positively correlated with the pre-treated maize hydrolysis yields. This indicates that these properties that may negatively contribute to the recalcitrance in untreated cell walls may positively contribute to their deconstruction by alkaline pre-treatment.
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Affiliation(s)
- Muyang Li
- Department of Biosystems & Agricultural Engineering, Michigan State University, East Lansing, MI 48824, USA DOE-Great Lakes Bioenergy Research Center, 1552 University Ave., Madison, WI 53703, USA
| | - Marlies Heckwolf
- DOE-Great Lakes Bioenergy Research Center, 1552 University Ave., Madison, WI 53703, USA
| | - Jacob D Crowe
- Department of Chemical Engineering & Materials Science, Michigan State University, East Lansing, MI 48824, USA
| | - Daniel L Williams
- DOE-Great Lakes Bioenergy Research Center, 1552 University Ave., Madison, WI 53703, USA Department of Chemical Engineering & Materials Science, Michigan State University, East Lansing, MI 48824, USA
| | - Timothy D Magee
- Department of Chemical Engineering & Materials Science, Michigan State University, East Lansing, MI 48824, USA
| | - Shawn M Kaeppler
- DOE-Great Lakes Bioenergy Research Center, 1552 University Ave., Madison, WI 53703, USA Department of Agronomy, University of Wisconsin-Madison, Madison, WI 53706-1597, USA
| | - Natalia de Leon
- DOE-Great Lakes Bioenergy Research Center, 1552 University Ave., Madison, WI 53703, USA Department of Agronomy, University of Wisconsin-Madison, Madison, WI 53706-1597, USA
| | - David B Hodge
- Department of Biosystems & Agricultural Engineering, Michigan State University, East Lansing, MI 48824, USA DOE-Great Lakes Bioenergy Research Center, 1552 University Ave., Madison, WI 53703, USA Department of Chemical Engineering & Materials Science, Michigan State University, East Lansing, MI 48824, USA Division of Sustainable Process Engineering, Luleå University of Technology, Luleå, Sweden 97187
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Crowe JD, Olsson S. Induction of laccase activity in Rhizoctonia solani by antagonistic Pseudomonas fluorescens strains and a range of chemical treatments. Appl Environ Microbiol 2001; 67:2088-94. [PMID: 11319086 PMCID: PMC92841 DOI: 10.1128/aem.67.5.2088-2094.2001] [Citation(s) in RCA: 101] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Abstract
Fungi often produce the phenoloxidase enzyme laccase during interactions with other organisms, an observation relevant to the development of biocontrols. By incorporating the laccase substrate 2,2'-azino-bis(3-ethylbenzthiazoline-6-sulfonic acid) (ABTS) into agar, we analyzed laccase induction in the plant-pathogenic fungus Rhizoctonia solani when paired against isolates of the soil bacterium Pseudomonas fluorescens. Substantial induction of R. solani laccase was seen only in pairings with strains of P. fluorescens known to produce antifungal metabolites. To study laccase induction further, a range of chemical treatments was applied to R. solani liquid cultures. p-Anisidine, copper(II), manganese(II), calcium ionophore A23187, lithium chloride, calcium chloride, cyclic AMP (cAMP), caffeine, amphotericin B, paraquat, ethanol, and isopropanol were all found to induce laccase; however, the P. fluorescens metabolite viscosinamide did not do so at the concentrations tested. The stress caused by these treatments was assessed by measuring changes in lipid peroxidation levels and dry weight. The results indicated that the laccase induction seen in pairing plate experiments was most likely due to calcium or heat shock signaling in response to the effects of bacterial metabolites, but that heavy metal and cAMP-driven laccase induction was involved in sclerotization.
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Affiliation(s)
- J D Crowe
- Section of Genetics and Microbiology, Department of Ecology, The Royal Veterinary and Agricultural University, 40, Thorvaldsenvej, DK-1871 Frederiksberg, Copenhagen, Denmark
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Frank JA, Hoffman RE, Mann JM, Crowe JD, Hinman AR. Imported measles. A potential control problem. JAMA 1981; 245:264-6. [PMID: 7452853] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [MESH Headings] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
Abstract
From Dec 23, 1978, through Jan 31, 1979, an outbreak of five laboratory-confirmed cases and four clinical cases of measles occurred in a Vietnamese refugee population living in a single housing complex in Albuquerque, NM. The index cases were in two refugee siblings in whom measles was incubating on arrival in the United States. Despite spread through three subsequent generations of disease transmission within the Vietnamese population, there was no additional spread into the general Albuquerque population. Responsible factors included the age distribution of susceptible persons, the social isolation of the refugee population, and the physical structure of the housing complex. There is a need to identify the problem of imported measles in "ethnic islands" in need of vaccination.
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Eisenberg M, Crowe JD. Measles and rubella eradication in Alaska. JAMA 1976; 235:179-80. [PMID: 946025] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [MESH Headings] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
Abstract
The Alaska Department of Health and Social Services has instituted a special surveillance program to investigate every suspected case of measles and rubella. Clinical and epidemiologic information is obtained, and serologic testing is performed to confirm all tentative diagnoses. In 1974, forty-one cases were investigated, and none were confirmed as measles or rubella. This record is attributed to high immunization levels and rapid epidemiologic follow-up of all suspected cases. We believe that this program can be easily instituted in other states, particularly those with a limited number of reported cases.
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