1
|
Newcomb M, Shakoor N. Nighttime Chlorophyll Fluorescence Imaging of Dark-Adapted Plants Using a Robotic Field Phenotyping Platform. Methods Mol Biol 2022; 2539:213-220. [PMID: 35895206 DOI: 10.1007/978-1-0716-2537-8_17] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/15/2023]
Abstract
Photosynthetic efficiency is increasingly recognized as an integration of plant responses to dynamic environments, establishing the need for data sets from both field trials and controlled environments. A robotic field scanner phenotyping platform at the University of Arizona is equipped with a high-throughput chlorophyll fluorescence imaging system capable of collecting data on field trials for genetic studies of a photosynthetic trait (Fv/Fm). A description of the fluorescence imaging system is provided in addition to methods for measurements across experimental field plots and a test to determine the impact of variable plant heights. The overall focus is on aspects of field applications of a chlorophyll fluorescence imaging system that differ from analogous systems in controlled environments.
Collapse
Affiliation(s)
- Maria Newcomb
- University of Arizona, School of Plant Sciences, Maricopa Agricultural Center, Maricopa, AZ, USA.
| | - Nadia Shakoor
- Donald Danforth Plant Science Center, St. Louis, MO, USA
| |
Collapse
|
2
|
Zendonadi Dos Santos N, Piepho HP, Condorelli GE, Licieri Groli E, Newcomb M, Ward R, Tuberosa R, Maccaferri M, Fiorani F, Rascher U, Muller O. High-throughput field phenotyping reveals genetic variation in photosynthetic traits in durum wheat under drought. Plant Cell Environ 2021; 44:2858-2878. [PMID: 34189744 DOI: 10.1111/pce.14136] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/17/2020] [Revised: 04/14/2021] [Accepted: 06/13/2021] [Indexed: 06/13/2023]
Abstract
Chlorophyll fluorescence (ChlF) is a powerful non-invasive technique for probing photosynthesis. Although proposed as a method for drought tolerance screening, ChlF has not yet been fully adopted in physiological breeding, mainly due to limitations in high-throughput field phenotyping capabilities. The light-induced fluorescence transient (LIFT) sensor has recently been shown to reliably provide active ChlF data for rapid and remote characterisation of plant photosynthetic performance. We used the LIFT sensor to quantify photosynthesis traits across time in a large panel of durum wheat genotypes subjected to a progressive drought in replicated field trials over two growing seasons. The photosynthetic performance was measured at the canopy level by means of the operating efficiency of Photosystem II ( Fq'/Fm' ) and the kinetics of electron transport measured by reoxidation rates ( Fr1' and Fr2' ). Short- and long-term changes in ChlF traits were found in response to soil water availability and due to interactions with weather fluctuations. In mild drought, Fq'/Fm' and Fr2' were little affected, while Fr1' was consistently accelerated in water-limited compared to well-watered plants, increasingly so with rising vapour pressure deficit. This high-throughput approach allowed assessment of the native genetic diversity in ChlF traits while considering the diurnal dynamics of photosynthesis.
Collapse
Affiliation(s)
| | - Hans-Peter Piepho
- Biostatistics Unit, Institute of Crop Science, University of Hohenheim, Stuttgart, Germany
| | | | - Eder Licieri Groli
- Department of Agricultural and Food Sciences, University of Bologna, Bologna, Italy
| | - Maria Newcomb
- Maricopa Agricultural Center, University of Arizona, Maricopa, Arizona, USA
| | - Richard Ward
- Maricopa Agricultural Center, University of Arizona, Maricopa, Arizona, USA
| | - Roberto Tuberosa
- Department of Agricultural and Food Sciences, University of Bologna, Bologna, Italy
| | - Marco Maccaferri
- Department of Agricultural and Food Sciences, University of Bologna, Bologna, Italy
| | - Fabio Fiorani
- Institute of Bio- and Geosciences, IBG-2: Plant Sciences, Forschungszentrum Jülich GmbH, Jülich, Germany
| | - Uwe Rascher
- Institute of Bio- and Geosciences, IBG-2: Plant Sciences, Forschungszentrum Jülich GmbH, Jülich, Germany
| | - Onno Muller
- Institute of Bio- and Geosciences, IBG-2: Plant Sciences, Forschungszentrum Jülich GmbH, Jülich, Germany
| |
Collapse
|
3
|
Olivera PD, Sikharulidze Z, Dumbadze R, Szabo LJ, Newcomb M, Natsarishvili K, Rouse MN, Luster DG, Jin Y. Presence of a Sexual Population of Puccinia graminis f. sp. tritici in Georgia Provides a Hotspot for Genotypic and Phenotypic Diversity. Phytopathology 2019; 109:2152-2160. [PMID: 31339468 DOI: 10.1094/phyto-06-19-0186-r] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/26/2023]
Abstract
Wheat stem rust, caused by Puccinia graminis f. sp. tritici, is a re-emerging disease exemplified by recent epidemics caused by new virulent races. Understanding the sources and origins of genetic variations in the pathogen populations globally can facilitate the development of better strategies in disease management. We analyzed 68 wheat stem rust samples collected between 2013 and 2015 from Georgia where stem rust incidences are frequent and the alternate host, common barberry, is present. A total of 116 single-pustule isolates were derived and evaluated on stem rust differential lines to determine the virulence phenotypes and 23 races were identified, many of which were detected for the first time. Unique virulence combinations including, Sr22+Sr24 and Sr13b+Sr35+Sr37 were detected. These virulence combinations pose new challenges to breeding programs because many of these genes are used in breeding for resistance to the Ug99 race group. Sixty-one isolates were genotyped using a custom single-nucleotide polymorphism chip and 17 genotypes were identified. The 2013 isolates contained 11 multilocus genotypes compared with isolates of 2014 and 2015, with five and three genotypes, respectively. The higher levels of virulence and genotypic diversity observed in the 2013 samples strongly indicated that sexual recombination occurs in the Georgian P. graminis f. sp. tritici population, and that the Caucasus region of Eurasia may be an important source of new races.[Formula: see text] Copyright © 2019 The Author(s). This is an open access article distributed under the CC BY 4.0 International license.
Collapse
Affiliation(s)
- Pablo D Olivera
- Department of Plant Pathology, University of Minnesota, St. Paul, MN 55108, U.S.A
| | - Zoya Sikharulidze
- Batumi Shota Rustaveli State University, Institute of Phytopathology and Biodiversity, Kobuleti, Adjara, Georgia, U.S.A
| | - Rusudan Dumbadze
- Batumi Shota Rustaveli State University, Institute of Phytopathology and Biodiversity, Kobuleti, Adjara, Georgia, U.S.A
| | - Les J Szabo
- U.S. Department of Agriculture-Agricultural Research Service, Cereal Disease Laboratory, University of Minnesota, St. Paul, MN 55108, U.S.A
| | - Maria Newcomb
- Department of Plant Pathology, University of Minnesota, St. Paul, MN 55108, U.S.A
| | - Ketino Natsarishvili
- Batumi Shota Rustaveli State University, Institute of Phytopathology and Biodiversity, Kobuleti, Adjara, Georgia, U.S.A
| | - Matthew N Rouse
- U.S. Department of Agriculture-Agricultural Research Service, Cereal Disease Laboratory, University of Minnesota, St. Paul, MN 55108, U.S.A
| | - Douglas G Luster
- U.S. Department of Agriculture- Agricultural Research Service, Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702, U.S.A
| | - Yue Jin
- U.S. Department of Agriculture-Agricultural Research Service, Cereal Disease Laboratory, University of Minnesota, St. Paul, MN 55108, U.S.A
| |
Collapse
|
4
|
Condorelli GE, Maccaferri M, Newcomb M, Andrade-Sanchez P, White JW, French AN, Sciara G, Ward R, Tuberosa R. Comparative Aerial and Ground Based High Throughput Phenotyping for the Genetic Dissection of NDVI as a Proxy for Drought Adaptive Traits in Durum Wheat. Front Plant Sci 2018; 9:893. [PMID: 29997645 PMCID: PMC6028805 DOI: 10.3389/fpls.2018.00893] [Citation(s) in RCA: 26] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/10/2018] [Accepted: 06/07/2018] [Indexed: 05/04/2023]
Abstract
High-throughput phenotyping platforms (HTPPs) provide novel opportunities to more effectively dissect the genetic basis of drought-adaptive traits. This genome-wide association study (GWAS) compares the results obtained with two Unmanned Aerial Vehicles (UAVs) and a ground-based platform used to measure Normalized Difference Vegetation Index (NDVI) in a panel of 248 elite durum wheat (Triticum turgidum L. ssp. durum Desf.) accessions at different growth stages and water regimes. Our results suggest increased ability of aerial over ground-based platforms to detect quantitative trait loci (QTL) for NDVI, particularly under terminal drought stress, with 22 and 16 single QTLs detected, respectively, and accounting for 89.6 vs. 64.7% phenotypic variance based on multiple QTL models. Additionally, the durum panel was investigated for leaf chlorophyll content (SPAD), leaf rolling and dry biomass under terminal drought stress. In total, 46 significant QTLs affected NDVI across platforms, 22 of which showed concomitant effects on leaf greenness, 2 on leaf rolling and 10 on biomass. Among 9 QTL hotspots on chromosomes 1A, 1B, 2B, 4B, 5B, 6B, and 7B that influenced NDVI and other drought-adaptive traits, 8 showed per se effects unrelated to phenology.
Collapse
Affiliation(s)
| | - Marco Maccaferri
- Department of Agricultural Sciences, University of Bologna, Bologna, Italy
| | - Maria Newcomb
- Maricopa Agricultural Center, University of Arizona, Tucson, AZ, United States
| | | | - Jeffrey W. White
- US Arid Land Agricultural Research Center, USDA-ARS, Maricopa, AZ, United States
| | - Andrew N. French
- US Arid Land Agricultural Research Center, USDA-ARS, Maricopa, AZ, United States
| | - Giuseppe Sciara
- Department of Agricultural Sciences, University of Bologna, Bologna, Italy
| | - Rick Ward
- Maricopa Agricultural Center, University of Arizona, Tucson, AZ, United States
| | - Roberto Tuberosa
- Department of Agricultural Sciences, University of Bologna, Bologna, Italy
| |
Collapse
|
5
|
Condorelli GE, Maccaferri M, Newcomb M, Andrade-Sanchez P, White JW, French AN, Sciara G, Ward R, Tuberosa R. Corrigendum: Comparative Aerial and Ground Based High Throughput Phenotyping for the Genetic Dissection of NDVI as a Proxy for Drought Adaptive Traits in Durum Wheat. Front Plant Sci 2018; 9:1885. [PMID: 30613202 PMCID: PMC6312001 DOI: 10.3389/fpls.2018.01885] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/04/2018] [Accepted: 12/05/2018] [Indexed: 05/13/2023]
Abstract
[This corrects the article DOI: 10.3389/fpls.2018.00893.].
Collapse
Affiliation(s)
| | - Marco Maccaferri
- Department of Agricultural Sciences, University of Bologna, Bologna, Italy
- *Correspondence: Marco Maccaferri
| | - Maria Newcomb
- Maricopa Agricultural Center, University of Arizona, Tucson, AZ, United States
| | | | - Jeffrey W. White
- US Arid Land Agricultural Research Center, USDA-ARS, Maricopa, AZ, United States
| | - Andrew N. French
- US Arid Land Agricultural Research Center, USDA-ARS, Maricopa, AZ, United States
| | - Giuseppe Sciara
- Department of Agricultural Sciences, University of Bologna, Bologna, Italy
| | - Rick Ward
- Maricopa Agricultural Center, University of Arizona, Tucson, AZ, United States
| | - Roberto Tuberosa
- Department of Agricultural Sciences, University of Bologna, Bologna, Italy
| |
Collapse
|
6
|
Nirmala J, Saini J, Newcomb M, Olivera P, Gale S, Klindworth D, Elias E, Talbert L, Chao S, Faris J, Xu S, Jin Y, Rouse MN. Discovery of a Novel Stem Rust Resistance Allele in Durum Wheat that Exhibits Differential Reactions to Ug99 Isolates. G3 (Bethesda) 2017; 7:3481-3490. [PMID: 28855282 PMCID: PMC5633396 DOI: 10.1534/g3.117.300209] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/02/2017] [Accepted: 08/24/2017] [Indexed: 11/18/2022]
Abstract
Wheat stem rust, caused by Puccinia graminis f. sp. tritici Eriks. & E. Henn, can incur yield losses in susceptible cultivars of durum wheat, Triticum turgidum ssp. durum (Desf.) Husnot. Although several durum cultivars possess the stem rust resistance gene Sr13, additional genes in durum wheat effective against emerging virulent races have not been described. Durum line 8155-B1 confers resistance against the P. graminis f. sp. tritici race TTKST, the variant race of the Ug99 race group with additional virulence to wheat stem rust resistance gene Sr24 However, 8155-B1 does not confer resistance to the first-described race in the Ug99 race group: TTKSK. We mapped a single gene conferring resistance in 8155-B1 against race TTKST, Sr8155B1, to chromosome arm 6AS by utilizing Rusty/8155-B1 and Rusty*2/8155-B1 populations and the 90K Infinium iSelect Custom bead chip supplemented by KASP assays. One marker, KASP_6AS_IWB10558, cosegregated with Sr8155B1 in both populations and correctly predicted Sr8155B1 presence or absence in 11 durum cultivars tested. We confirmed the presence of Sr8155B1 in cultivar Mountrail by mapping in the population Choteau/Mountrail. The marker developed in this study could be used to predict the presence of resistance to race TTKST in uncharacterized durum breeding lines, and also to combine Sr8155B1 with resistance genes effective to Ug99 such as Sr13 The map location of Sr8155B1 cannot rule out the possibility that this gene is an allele at the Sr8 locus. However, race specificity indicates that Sr8155B1 is different from the known alleles Sr8a and Sr8b.
Collapse
Affiliation(s)
- Jayaveeramuthu Nirmala
- Cereal Disease Laboratory, United States Department of Agriculture-Agricultural Research Service, Saint Paul, Minnesota 55108
- Department of Plant Pathology, University of Minnesota, Saint Paul, Minnesota 55108
| | - Jyoti Saini
- Department of Plant Sciences, North Dakota State University, Fargo, North Dakota 58108
| | - Maria Newcomb
- The School of Plant Sciences, University of Arizona, Tucson, Arizona 85721
| | - Pablo Olivera
- Department of Plant Pathology, University of Minnesota, Saint Paul, Minnesota 55108
| | - Sam Gale
- Cereal Disease Laboratory, United States Department of Agriculture-Agricultural Research Service, Saint Paul, Minnesota 55108
| | - Daryl Klindworth
- Cereal Crops Research, United States Department of Agriculture-Agricultural Research Service, Fargo, North Dakota 58102
| | - Elias Elias
- Department of Plant Sciences, North Dakota State University, Fargo, North Dakota 58108
| | - Luther Talbert
- Department of Plant Sciences and Plant Pathology, Montana State University, Bozeman, Montana 59717
| | - Shiaoman Chao
- Cereal Crops Research, United States Department of Agriculture-Agricultural Research Service, Fargo, North Dakota 58102
| | - Justin Faris
- Cereal Crops Research, United States Department of Agriculture-Agricultural Research Service, Fargo, North Dakota 58102
| | - Steven Xu
- Cereal Crops Research, United States Department of Agriculture-Agricultural Research Service, Fargo, North Dakota 58102
| | - Yue Jin
- Cereal Disease Laboratory, United States Department of Agriculture-Agricultural Research Service, Saint Paul, Minnesota 55108
- Department of Plant Pathology, University of Minnesota, Saint Paul, Minnesota 55108
| | - Matthew N Rouse
- Cereal Disease Laboratory, United States Department of Agriculture-Agricultural Research Service, Saint Paul, Minnesota 55108
- Department of Plant Pathology, University of Minnesota, Saint Paul, Minnesota 55108
| |
Collapse
|
7
|
Beloshapka AN, de Godoy MRC, Detweiler KB, Newcomb M, Ellegård KH, Fahey GC, Swanson KS. Apparent total tract macronutrient digestibility, fecal characteristics, and fecal fermentative end-product concentrations of healthy adult dogs fed bioprocessed soy protein. J Anim Sci 2017; 94:3826-3834. [PMID: 27898907 DOI: 10.2527/jas.2016-0449] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
Animal proteins are commonly used in extruded dog foods. Plant-based proteins have a more consistent nutrient profile than animal sources but may contain antinutritional factors, including trypsin inhibitors and oligosaccharides. Bioprocessed soy protein (SP; HP-300; Hamlet Protein, Inc., Findlay, OH) is a processed soy-based product with low antinutritional factor concentrations and high protein quality. The objective was to evaluate the effects of SP on apparent total tract macronutrient digestibility, fecal characteristics, and fecal fermentative end products. Furthermore, this study aimed to identify if SP can be a replacement for poultry byproduct meal (PBPM) in dog food and determine if there are practical limits to its use. Three palatability experiments were conducted to evaluate 1) 0 vs. 12% SP, 2) 0 vs. 48% SP, and 3) 12 vs. 48% SP. For digestibility, 48 healthy adult Beagle dogs (20 females and 28 males; 3.4 yr mean age and 10.0 kg mean BW) were randomly allotted to 1 of 6 dietary treatments, 0 (control), 4, 8, 12, 24, and 48% SP, in a completely randomized design. All diets were formulated to meet Association of American Feed Control Officials nutrient profiles and contained approximately 30% CP and 16% fat. The treatment period consisted of a 10-d diet adaptation phase followed by a 4-d fresh and total fecal collection phase. The palatability results suggest that of the 3 inclusion levels tested (0, 12, or 48% SP), the best inclusion of SP is 12%, which was preferred over 0 and 48% SP. Digestibility and fecal data were evaluated for linear and quadratic effects using SAS. Stool output (on both an as-is and a DM basis) did not differ from the control except for the 48% SP treatment ( < 0.01). Fecal output per unit food intake differed ( < 0.01) from the control only at the 24 and 48% SP inclusion rates. No significant effects of feeding SP were found on stool consistency scores. Digestibility of DM, OM, and energy did not differ from the control at any inclusion rate, except for a decrease ( < 0.01) at 48% SP. Apparent total tract CP digestibility was not affected by treatment and ranged from 82.9 to 86.2%. Fecal short-chain fatty acid concentrations were greater ( < 0.01) in dogs fed 24 and 48% SP compared with the control. Conversely, branched-chain fatty acid concentrations were lower ( < 0.01) in dogs fed 8 to 48% SP compared with the control. These data suggest that SP is a suitable replacement for PBPM in dog diets up to a 24% inclusion level.
Collapse
|
8
|
Babiker EM, Gordon TC, Bonman JM, Chao S, Rouse MN, Jin Y, Newcomb M, Wanyera R, Bhavani S. Genetic Loci Conditioning Adult Plant Resistance to the Ug99 Race Group and Seedling Resistance to Races TRTTF and TTTTF of the Stem Rust Pathogen in Wheat Landrace CItr 15026. Plant Dis 2017; 101:496-501. [PMID: 30677344 DOI: 10.1094/pdis-10-16-1447-re] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
Wheat landrace CItr 15026 previously showed adult plant resistance (APR) to the Ug99 stem rust race group in Kenya and seedling resistance to Puccinia graminis f. sp. tritici races QFCSC, TTTTF, and TRTTF. CItr 15026 was crossed to susceptible accessions LMPG-6 and Red Bobs, and 180 double haploid (DH) lines and 140 recombinant inbred lines (RIL), respectively, were developed. The 90K wheat iSelect single-nucleotide polymorphism platform was used to genotype the parents and populations. Parents and 180 DH lines were evaluated in the field in Kenya for three seasons. A major quantitative trait locus (QTL) for APR was consistently detected on chromosome arm 6AS. This QTL was further detected in the RIL population screened in Kenya for one season. Parents, F1, and the two populations were tested as seedlings against races TRTTF and TTTTF. In addition, the DH population was tested against race QFCSC. Goodness-of-fit tests indicated that the TRTTF resistance in CItr 15026 was controlled by two complementary genes whereas the TTTTF and QFCSC resistance was conditioned by one dominant gene. The TRTTF resistance loci mapped to chromosome arms 6AS and 6DS, whereas the TTTTF and QFCSC resistance locus mapped to the same region on 6DS as the TRTTF resistance. The APR identified in CItr 15026 should be useful in developing cultivars with durable stem rust resistance.
Collapse
Affiliation(s)
- E M Babiker
- United States Department of Agriculture-Agricultural Research Service (USDA-ARS), Small Grains and Potato Germplasm Research Unit, Aberdeen, ID 83210
| | - T C Gordon
- United States Department of Agriculture-Agricultural Research Service (USDA-ARS), Small Grains and Potato Germplasm Research Unit, Aberdeen, ID 83210
| | - J M Bonman
- United States Department of Agriculture-Agricultural Research Service (USDA-ARS), Small Grains and Potato Germplasm Research Unit, Aberdeen, ID 83210
| | - S Chao
- USDA-ARS, Cereal Crops Research, Fargo, ND 58102
| | - M N Rouse
- USDA-ARS, Cereal Disease Laboratory, St. Paul, MN 55108
| | - Y Jin
- USDA-ARS, Cereal Disease Laboratory, St. Paul, MN 55108
| | - M Newcomb
- School of Plant Sciences, University of Arizona, Maricopa
| | - R Wanyera
- Kenya Agricultural and Livestock Research Organization, Njoro 20107, Kenya
| | - S Bhavani
- International Maize and Wheat Improvement Center, Nairobi, Kenya
| |
Collapse
|
9
|
Babiker EM, Gordon TC, Chao S, Rouse MN, Wanyera R, Newcomb M, Brown-Guedira G, Pretorius ZA, Bonman JM. Genetic mapping of resistance to the Ug99 race group of Puccinia graminis f. sp. tritici in a spring wheat landrace CItr 4311. Theor Appl Genet 2016; 129:2161-2170. [PMID: 27544524 DOI: 10.1007/s00122-016-2764-5] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/13/2016] [Accepted: 08/03/2016] [Indexed: 05/21/2023]
Abstract
A gene for Ug99 resistance from wheat landrace CItr 4311 was detected on the long arm of chromosome 2B. Wheat landrace CItr 4311 has seedling resistance to stem rust caused by Puccinia graminis f. sp. tritici race TTKSK and field resistance to the Ug99 race group. Parents, F1 seedlings, 121 doubled haploid (DH) lines, and 124 recombinant inbred lines (RILs) developed from a cross between CItr 4311 and the susceptible line LMPG-6 were evaluated for seedling resistance to race TTKSK. Goodness-of-fit tests indicated that a single dominant gene in CItr 4311 conditioned the TTKSK resistance. The 90 K wheat iSelect SNP platform was used to genotype parents and the DH population. The seedling resistance locus was mapped to the chromosome arm 2BL. Parents and the DH population were evaluated for field resistance in Kenya. One major QTL for the field resistance was consistently detected in the same region on 2BL as the seedling resistance. Using KASP assays, five linked SNP markers were used to verify the result in the 124 RIL, 35 wheat accessions, 46 DH lines from the LMPG-6/PI 165194 cross and F1 seedlings, and susceptible bulks derived from crosses between six resistant landraces with LMPG-6. Race specificity, mapping results, and haplotype similarity with lines with Sr9h (Gabo 56, Timstein, and PI 670015), support the hypothesis that the Sr gene in CItr 4311 and the landraces is Sr9h. The KASP assays developed in this study will be useful for pyramiding the TTKSK resistance from CItr 4311 with other Sr genes effective against Ug99.
Collapse
Affiliation(s)
- E M Babiker
- Small Grains and Potato Germplasm Research Unit, USDA-ARS, 1691 S 2700 W, Aberdeen, ID, 83210, USA.
| | - T C Gordon
- Small Grains and Potato Germplasm Research Unit, USDA-ARS, 1691 S 2700 W, Aberdeen, ID, 83210, USA
| | - S Chao
- Cereal Crops Research Unit, USDA-ARS, 1605 Albrecht Blvd, Fargo, ND, 58102, USA
| | - M N Rouse
- Cereal Disease Laboratory, USDA-ARS, 1551 Lindig Ave, St. Paul, MN, 55108, USA
| | - R Wanyera
- Kenya Agricultural and Livestock Research Organization, Njoro, 20107, Kenya
| | - M Newcomb
- School of Plant Sciences, University of Arizona, Maricopa, AZ, 85138, USA
| | - G Brown-Guedira
- Plant Science Research Unit, USDA-ARS, Raleigh, NC, 27606, USA
| | - Z A Pretorius
- Department of Plant Sciences, University of the Free State, Bloemfontein, 9300, South Africa
| | - J M Bonman
- Small Grains and Potato Germplasm Research Unit, USDA-ARS, 1691 S 2700 W, Aberdeen, ID, 83210, USA.
| |
Collapse
|
10
|
Newcomb M, Olivera PD, Rouse MN, Szabo LJ, Johnson J, Gale S, Luster DG, Wanyera R, Macharia G, Bhavani S, Hodson D, Patpour M, Hovmøller MS, Fetch TG, Jin Y. Kenyan Isolates of Puccinia graminis f. sp. tritici from 2008 to 2014: Virulence to SrTmp in the Ug99 Race Group and Implications for Breeding Programs. Phytopathology 2016; 100:986-96. [PMID: 27019064 DOI: 10.1094/phyto-12-09-0349] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/13/2023]
Abstract
Frequent emergence of new variants in the Puccinia graminis f. sp. tritici Ug99 race group in Kenya has made pathogen survey a priority. We analyzed 140 isolates from 78 P. graminis f. sp. tritici samples collected in Kenya between 2008 and 2014 and identified six races, including three not detected prior to 2013. Genotypic analysis of 20 isolates from 2013 and 2014 collections showed that the new races TTHST, TTKTK, and TTKTT belong to the Ug99 race group. International advanced breeding lines were evaluated against an isolate of TTKTT (Sr31, Sr24, and SrTmp virulence) at the seedling stage. From 169 advanced lines from Kenya, 23% of lines with resistance to races TTKSK and TTKST were susceptible to TTKTT and, from two North American regional nurseries, 44 and 91% of resistant lines were susceptible. Three lines with combined resistance genes were developed to facilitate pathogen monitoring and race identification. These results indicate the increasing virulence and variability in the Kenyan P. graminis f. sp. tritici population and reveal vulnerabilities of elite germplasm to new races.
Collapse
Affiliation(s)
- Maria Newcomb
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and fifteenth authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth and ninth authors: Kenya Agricultural and Livestock Research Organization, Njoro, Kenya; tenth author: International Maize and Wheat Improvement Center (CIMMYT)-Kenya, Nairobi, Kenya; eleventh author: CIMMYT-Ethiopia, Addis Ababa, Ethiopia; twelfth and thirteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; and fourteenth author: Agriculture and Agri-Food Canada, Brandon, Manitoba, Canada
| | - Pablo D Olivera
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and fifteenth authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth and ninth authors: Kenya Agricultural and Livestock Research Organization, Njoro, Kenya; tenth author: International Maize and Wheat Improvement Center (CIMMYT)-Kenya, Nairobi, Kenya; eleventh author: CIMMYT-Ethiopia, Addis Ababa, Ethiopia; twelfth and thirteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; and fourteenth author: Agriculture and Agri-Food Canada, Brandon, Manitoba, Canada
| | - Matthew N Rouse
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and fifteenth authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth and ninth authors: Kenya Agricultural and Livestock Research Organization, Njoro, Kenya; tenth author: International Maize and Wheat Improvement Center (CIMMYT)-Kenya, Nairobi, Kenya; eleventh author: CIMMYT-Ethiopia, Addis Ababa, Ethiopia; twelfth and thirteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; and fourteenth author: Agriculture and Agri-Food Canada, Brandon, Manitoba, Canada
| | - Les J Szabo
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and fifteenth authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth and ninth authors: Kenya Agricultural and Livestock Research Organization, Njoro, Kenya; tenth author: International Maize and Wheat Improvement Center (CIMMYT)-Kenya, Nairobi, Kenya; eleventh author: CIMMYT-Ethiopia, Addis Ababa, Ethiopia; twelfth and thirteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; and fourteenth author: Agriculture and Agri-Food Canada, Brandon, Manitoba, Canada
| | - Jerry Johnson
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and fifteenth authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth and ninth authors: Kenya Agricultural and Livestock Research Organization, Njoro, Kenya; tenth author: International Maize and Wheat Improvement Center (CIMMYT)-Kenya, Nairobi, Kenya; eleventh author: CIMMYT-Ethiopia, Addis Ababa, Ethiopia; twelfth and thirteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; and fourteenth author: Agriculture and Agri-Food Canada, Brandon, Manitoba, Canada
| | - Sam Gale
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and fifteenth authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth and ninth authors: Kenya Agricultural and Livestock Research Organization, Njoro, Kenya; tenth author: International Maize and Wheat Improvement Center (CIMMYT)-Kenya, Nairobi, Kenya; eleventh author: CIMMYT-Ethiopia, Addis Ababa, Ethiopia; twelfth and thirteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; and fourteenth author: Agriculture and Agri-Food Canada, Brandon, Manitoba, Canada
| | - Douglas G Luster
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and fifteenth authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth and ninth authors: Kenya Agricultural and Livestock Research Organization, Njoro, Kenya; tenth author: International Maize and Wheat Improvement Center (CIMMYT)-Kenya, Nairobi, Kenya; eleventh author: CIMMYT-Ethiopia, Addis Ababa, Ethiopia; twelfth and thirteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; and fourteenth author: Agriculture and Agri-Food Canada, Brandon, Manitoba, Canada
| | - Ruth Wanyera
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and fifteenth authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth and ninth authors: Kenya Agricultural and Livestock Research Organization, Njoro, Kenya; tenth author: International Maize and Wheat Improvement Center (CIMMYT)-Kenya, Nairobi, Kenya; eleventh author: CIMMYT-Ethiopia, Addis Ababa, Ethiopia; twelfth and thirteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; and fourteenth author: Agriculture and Agri-Food Canada, Brandon, Manitoba, Canada
| | - Godwin Macharia
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and fifteenth authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth and ninth authors: Kenya Agricultural and Livestock Research Organization, Njoro, Kenya; tenth author: International Maize and Wheat Improvement Center (CIMMYT)-Kenya, Nairobi, Kenya; eleventh author: CIMMYT-Ethiopia, Addis Ababa, Ethiopia; twelfth and thirteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; and fourteenth author: Agriculture and Agri-Food Canada, Brandon, Manitoba, Canada
| | - Sridhar Bhavani
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and fifteenth authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth and ninth authors: Kenya Agricultural and Livestock Research Organization, Njoro, Kenya; tenth author: International Maize and Wheat Improvement Center (CIMMYT)-Kenya, Nairobi, Kenya; eleventh author: CIMMYT-Ethiopia, Addis Ababa, Ethiopia; twelfth and thirteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; and fourteenth author: Agriculture and Agri-Food Canada, Brandon, Manitoba, Canada
| | - David Hodson
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and fifteenth authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth and ninth authors: Kenya Agricultural and Livestock Research Organization, Njoro, Kenya; tenth author: International Maize and Wheat Improvement Center (CIMMYT)-Kenya, Nairobi, Kenya; eleventh author: CIMMYT-Ethiopia, Addis Ababa, Ethiopia; twelfth and thirteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; and fourteenth author: Agriculture and Agri-Food Canada, Brandon, Manitoba, Canada
| | - Mehran Patpour
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and fifteenth authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth and ninth authors: Kenya Agricultural and Livestock Research Organization, Njoro, Kenya; tenth author: International Maize and Wheat Improvement Center (CIMMYT)-Kenya, Nairobi, Kenya; eleventh author: CIMMYT-Ethiopia, Addis Ababa, Ethiopia; twelfth and thirteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; and fourteenth author: Agriculture and Agri-Food Canada, Brandon, Manitoba, Canada
| | - Mogens S Hovmøller
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and fifteenth authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth and ninth authors: Kenya Agricultural and Livestock Research Organization, Njoro, Kenya; tenth author: International Maize and Wheat Improvement Center (CIMMYT)-Kenya, Nairobi, Kenya; eleventh author: CIMMYT-Ethiopia, Addis Ababa, Ethiopia; twelfth and thirteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; and fourteenth author: Agriculture and Agri-Food Canada, Brandon, Manitoba, Canada
| | - Thomas G Fetch
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and fifteenth authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth and ninth authors: Kenya Agricultural and Livestock Research Organization, Njoro, Kenya; tenth author: International Maize and Wheat Improvement Center (CIMMYT)-Kenya, Nairobi, Kenya; eleventh author: CIMMYT-Ethiopia, Addis Ababa, Ethiopia; twelfth and thirteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; and fourteenth author: Agriculture and Agri-Food Canada, Brandon, Manitoba, Canada
| | - Yue Jin
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and fifteenth authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth and ninth authors: Kenya Agricultural and Livestock Research Organization, Njoro, Kenya; tenth author: International Maize and Wheat Improvement Center (CIMMYT)-Kenya, Nairobi, Kenya; eleventh author: CIMMYT-Ethiopia, Addis Ababa, Ethiopia; twelfth and thirteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; and fourteenth author: Agriculture and Agri-Food Canada, Brandon, Manitoba, Canada
| |
Collapse
|
11
|
Newcomb M, Olivera PD, Rouse MN, Szabo LJ, Johnson J, Gale S, Luster DG, Wanyera R, Macharia G, Bhavani S, Hodson D, Patpour M, Hovmøller MS, Fetch TG, Jin Y. Kenyan Isolates of Puccinia graminis f. sp. tritici from 2008 to 2014: Virulence to SrTmp in the Ug99 Race Group and Implications for Breeding Programs. Phytopathology 2016; 106:729-36. [PMID: 27019064 DOI: 10.1094/phyto-12-15-0337-r] [Citation(s) in RCA: 37] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
Frequent emergence of new variants in the Puccinia graminis f. sp. tritici Ug99 race group in Kenya has made pathogen survey a priority. We analyzed 140 isolates from 78 P. graminis f. sp. tritici samples collected in Kenya between 2008 and 2014 and identified six races, including three not detected prior to 2013. Genotypic analysis of 20 isolates from 2013 and 2014 collections showed that the new races TTHST, TTKTK, and TTKTT belong to the Ug99 race group. International advanced breeding lines were evaluated against an isolate of TTKTT (Sr31, Sr24, and SrTmp virulence) at the seedling stage. From 169 advanced lines from Kenya, 23% of lines with resistance to races TTKSK and TTKST were susceptible to TTKTT and, from two North American regional nurseries, 44 and 91% of resistant lines were susceptible. Three lines with combined resistance genes were developed to facilitate pathogen monitoring and race identification. These results indicate the increasing virulence and variability in the Kenyan P. graminis f. sp. tritici population and reveal vulnerabilities of elite germplasm to new races.
Collapse
Affiliation(s)
- Maria Newcomb
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and fifteenth authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth and ninth authors: Kenya Agricultural and Livestock Research Organization, Njoro, Kenya; tenth author: International Maize and Wheat Improvement Center (CIMMYT)-Kenya, Nairobi, Kenya; eleventh author: CIMMYT-Ethiopia, Addis Ababa, Ethiopia; twelfth and thirteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; and fourteenth author: Agriculture and Agri-Food Canada, Brandon, Manitoba, Canada
| | - Pablo D Olivera
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and fifteenth authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth and ninth authors: Kenya Agricultural and Livestock Research Organization, Njoro, Kenya; tenth author: International Maize and Wheat Improvement Center (CIMMYT)-Kenya, Nairobi, Kenya; eleventh author: CIMMYT-Ethiopia, Addis Ababa, Ethiopia; twelfth and thirteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; and fourteenth author: Agriculture and Agri-Food Canada, Brandon, Manitoba, Canada
| | - Matthew N Rouse
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and fifteenth authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth and ninth authors: Kenya Agricultural and Livestock Research Organization, Njoro, Kenya; tenth author: International Maize and Wheat Improvement Center (CIMMYT)-Kenya, Nairobi, Kenya; eleventh author: CIMMYT-Ethiopia, Addis Ababa, Ethiopia; twelfth and thirteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; and fourteenth author: Agriculture and Agri-Food Canada, Brandon, Manitoba, Canada
| | - Les J Szabo
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and fifteenth authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth and ninth authors: Kenya Agricultural and Livestock Research Organization, Njoro, Kenya; tenth author: International Maize and Wheat Improvement Center (CIMMYT)-Kenya, Nairobi, Kenya; eleventh author: CIMMYT-Ethiopia, Addis Ababa, Ethiopia; twelfth and thirteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; and fourteenth author: Agriculture and Agri-Food Canada, Brandon, Manitoba, Canada
| | - Jerry Johnson
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and fifteenth authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth and ninth authors: Kenya Agricultural and Livestock Research Organization, Njoro, Kenya; tenth author: International Maize and Wheat Improvement Center (CIMMYT)-Kenya, Nairobi, Kenya; eleventh author: CIMMYT-Ethiopia, Addis Ababa, Ethiopia; twelfth and thirteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; and fourteenth author: Agriculture and Agri-Food Canada, Brandon, Manitoba, Canada
| | - Sam Gale
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and fifteenth authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth and ninth authors: Kenya Agricultural and Livestock Research Organization, Njoro, Kenya; tenth author: International Maize and Wheat Improvement Center (CIMMYT)-Kenya, Nairobi, Kenya; eleventh author: CIMMYT-Ethiopia, Addis Ababa, Ethiopia; twelfth and thirteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; and fourteenth author: Agriculture and Agri-Food Canada, Brandon, Manitoba, Canada
| | - Douglas G Luster
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and fifteenth authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth and ninth authors: Kenya Agricultural and Livestock Research Organization, Njoro, Kenya; tenth author: International Maize and Wheat Improvement Center (CIMMYT)-Kenya, Nairobi, Kenya; eleventh author: CIMMYT-Ethiopia, Addis Ababa, Ethiopia; twelfth and thirteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; and fourteenth author: Agriculture and Agri-Food Canada, Brandon, Manitoba, Canada
| | - Ruth Wanyera
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and fifteenth authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth and ninth authors: Kenya Agricultural and Livestock Research Organization, Njoro, Kenya; tenth author: International Maize and Wheat Improvement Center (CIMMYT)-Kenya, Nairobi, Kenya; eleventh author: CIMMYT-Ethiopia, Addis Ababa, Ethiopia; twelfth and thirteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; and fourteenth author: Agriculture and Agri-Food Canada, Brandon, Manitoba, Canada
| | - Godwin Macharia
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and fifteenth authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth and ninth authors: Kenya Agricultural and Livestock Research Organization, Njoro, Kenya; tenth author: International Maize and Wheat Improvement Center (CIMMYT)-Kenya, Nairobi, Kenya; eleventh author: CIMMYT-Ethiopia, Addis Ababa, Ethiopia; twelfth and thirteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; and fourteenth author: Agriculture and Agri-Food Canada, Brandon, Manitoba, Canada
| | - Sridhar Bhavani
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and fifteenth authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth and ninth authors: Kenya Agricultural and Livestock Research Organization, Njoro, Kenya; tenth author: International Maize and Wheat Improvement Center (CIMMYT)-Kenya, Nairobi, Kenya; eleventh author: CIMMYT-Ethiopia, Addis Ababa, Ethiopia; twelfth and thirteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; and fourteenth author: Agriculture and Agri-Food Canada, Brandon, Manitoba, Canada
| | - David Hodson
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and fifteenth authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth and ninth authors: Kenya Agricultural and Livestock Research Organization, Njoro, Kenya; tenth author: International Maize and Wheat Improvement Center (CIMMYT)-Kenya, Nairobi, Kenya; eleventh author: CIMMYT-Ethiopia, Addis Ababa, Ethiopia; twelfth and thirteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; and fourteenth author: Agriculture and Agri-Food Canada, Brandon, Manitoba, Canada
| | - Mehran Patpour
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and fifteenth authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth and ninth authors: Kenya Agricultural and Livestock Research Organization, Njoro, Kenya; tenth author: International Maize and Wheat Improvement Center (CIMMYT)-Kenya, Nairobi, Kenya; eleventh author: CIMMYT-Ethiopia, Addis Ababa, Ethiopia; twelfth and thirteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; and fourteenth author: Agriculture and Agri-Food Canada, Brandon, Manitoba, Canada
| | - Mogens S Hovmøller
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and fifteenth authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth and ninth authors: Kenya Agricultural and Livestock Research Organization, Njoro, Kenya; tenth author: International Maize and Wheat Improvement Center (CIMMYT)-Kenya, Nairobi, Kenya; eleventh author: CIMMYT-Ethiopia, Addis Ababa, Ethiopia; twelfth and thirteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; and fourteenth author: Agriculture and Agri-Food Canada, Brandon, Manitoba, Canada
| | - Thomas G Fetch
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and fifteenth authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth and ninth authors: Kenya Agricultural and Livestock Research Organization, Njoro, Kenya; tenth author: International Maize and Wheat Improvement Center (CIMMYT)-Kenya, Nairobi, Kenya; eleventh author: CIMMYT-Ethiopia, Addis Ababa, Ethiopia; twelfth and thirteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; and fourteenth author: Agriculture and Agri-Food Canada, Brandon, Manitoba, Canada
| | - Yue Jin
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and fifteenth authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth and ninth authors: Kenya Agricultural and Livestock Research Organization, Njoro, Kenya; tenth author: International Maize and Wheat Improvement Center (CIMMYT)-Kenya, Nairobi, Kenya; eleventh author: CIMMYT-Ethiopia, Addis Ababa, Ethiopia; twelfth and thirteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; and fourteenth author: Agriculture and Agri-Food Canada, Brandon, Manitoba, Canada
| |
Collapse
|
12
|
Newcomb M, Olivera PD, Rouse MN, Szabo LJ, Johnson J, Gale S, Luster DG, Wanyera R, Macharia G, Bhavani S, Hodson D, Patpour M, Hovmøller MS, Fetch TG, Jin Y. Kenyan Isolates of Puccinia graminis f. sp. tritici from 2008 to 2014: Virulence to SrTmp in the Ug99 Race Group and Implications for Breeding Programs. Phytopathology 2016. [PMID: 27019064 DOI: 10.1094/pdis-08-15-0938-pdn] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/09/2023]
Abstract
Frequent emergence of new variants in the Puccinia graminis f. sp. tritici Ug99 race group in Kenya has made pathogen survey a priority. We analyzed 140 isolates from 78 P. graminis f. sp. tritici samples collected in Kenya between 2008 and 2014 and identified six races, including three not detected prior to 2013. Genotypic analysis of 20 isolates from 2013 and 2014 collections showed that the new races TTHST, TTKTK, and TTKTT belong to the Ug99 race group. International advanced breeding lines were evaluated against an isolate of TTKTT (Sr31, Sr24, and SrTmp virulence) at the seedling stage. From 169 advanced lines from Kenya, 23% of lines with resistance to races TTKSK and TTKST were susceptible to TTKTT and, from two North American regional nurseries, 44 and 91% of resistant lines were susceptible. Three lines with combined resistance genes were developed to facilitate pathogen monitoring and race identification. These results indicate the increasing virulence and variability in the Kenyan P. graminis f. sp. tritici population and reveal vulnerabilities of elite germplasm to new races.
Collapse
Affiliation(s)
- Maria Newcomb
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and fifteenth authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth and ninth authors: Kenya Agricultural and Livestock Research Organization, Njoro, Kenya; tenth author: International Maize and Wheat Improvement Center (CIMMYT)-Kenya, Nairobi, Kenya; eleventh author: CIMMYT-Ethiopia, Addis Ababa, Ethiopia; twelfth and thirteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; and fourteenth author: Agriculture and Agri-Food Canada, Brandon, Manitoba, Canada
| | - Pablo D Olivera
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and fifteenth authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth and ninth authors: Kenya Agricultural and Livestock Research Organization, Njoro, Kenya; tenth author: International Maize and Wheat Improvement Center (CIMMYT)-Kenya, Nairobi, Kenya; eleventh author: CIMMYT-Ethiopia, Addis Ababa, Ethiopia; twelfth and thirteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; and fourteenth author: Agriculture and Agri-Food Canada, Brandon, Manitoba, Canada
| | - Matthew N Rouse
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and fifteenth authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth and ninth authors: Kenya Agricultural and Livestock Research Organization, Njoro, Kenya; tenth author: International Maize and Wheat Improvement Center (CIMMYT)-Kenya, Nairobi, Kenya; eleventh author: CIMMYT-Ethiopia, Addis Ababa, Ethiopia; twelfth and thirteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; and fourteenth author: Agriculture and Agri-Food Canada, Brandon, Manitoba, Canada
| | - Les J Szabo
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and fifteenth authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth and ninth authors: Kenya Agricultural and Livestock Research Organization, Njoro, Kenya; tenth author: International Maize and Wheat Improvement Center (CIMMYT)-Kenya, Nairobi, Kenya; eleventh author: CIMMYT-Ethiopia, Addis Ababa, Ethiopia; twelfth and thirteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; and fourteenth author: Agriculture and Agri-Food Canada, Brandon, Manitoba, Canada
| | - Jerry Johnson
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and fifteenth authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth and ninth authors: Kenya Agricultural and Livestock Research Organization, Njoro, Kenya; tenth author: International Maize and Wheat Improvement Center (CIMMYT)-Kenya, Nairobi, Kenya; eleventh author: CIMMYT-Ethiopia, Addis Ababa, Ethiopia; twelfth and thirteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; and fourteenth author: Agriculture and Agri-Food Canada, Brandon, Manitoba, Canada
| | - Sam Gale
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and fifteenth authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth and ninth authors: Kenya Agricultural and Livestock Research Organization, Njoro, Kenya; tenth author: International Maize and Wheat Improvement Center (CIMMYT)-Kenya, Nairobi, Kenya; eleventh author: CIMMYT-Ethiopia, Addis Ababa, Ethiopia; twelfth and thirteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; and fourteenth author: Agriculture and Agri-Food Canada, Brandon, Manitoba, Canada
| | - Douglas G Luster
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and fifteenth authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth and ninth authors: Kenya Agricultural and Livestock Research Organization, Njoro, Kenya; tenth author: International Maize and Wheat Improvement Center (CIMMYT)-Kenya, Nairobi, Kenya; eleventh author: CIMMYT-Ethiopia, Addis Ababa, Ethiopia; twelfth and thirteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; and fourteenth author: Agriculture and Agri-Food Canada, Brandon, Manitoba, Canada
| | - Ruth Wanyera
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and fifteenth authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth and ninth authors: Kenya Agricultural and Livestock Research Organization, Njoro, Kenya; tenth author: International Maize and Wheat Improvement Center (CIMMYT)-Kenya, Nairobi, Kenya; eleventh author: CIMMYT-Ethiopia, Addis Ababa, Ethiopia; twelfth and thirteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; and fourteenth author: Agriculture and Agri-Food Canada, Brandon, Manitoba, Canada
| | - Godwin Macharia
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and fifteenth authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth and ninth authors: Kenya Agricultural and Livestock Research Organization, Njoro, Kenya; tenth author: International Maize and Wheat Improvement Center (CIMMYT)-Kenya, Nairobi, Kenya; eleventh author: CIMMYT-Ethiopia, Addis Ababa, Ethiopia; twelfth and thirteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; and fourteenth author: Agriculture and Agri-Food Canada, Brandon, Manitoba, Canada
| | - Sridhar Bhavani
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and fifteenth authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth and ninth authors: Kenya Agricultural and Livestock Research Organization, Njoro, Kenya; tenth author: International Maize and Wheat Improvement Center (CIMMYT)-Kenya, Nairobi, Kenya; eleventh author: CIMMYT-Ethiopia, Addis Ababa, Ethiopia; twelfth and thirteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; and fourteenth author: Agriculture and Agri-Food Canada, Brandon, Manitoba, Canada
| | - David Hodson
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and fifteenth authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth and ninth authors: Kenya Agricultural and Livestock Research Organization, Njoro, Kenya; tenth author: International Maize and Wheat Improvement Center (CIMMYT)-Kenya, Nairobi, Kenya; eleventh author: CIMMYT-Ethiopia, Addis Ababa, Ethiopia; twelfth and thirteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; and fourteenth author: Agriculture and Agri-Food Canada, Brandon, Manitoba, Canada
| | - Mehran Patpour
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and fifteenth authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth and ninth authors: Kenya Agricultural and Livestock Research Organization, Njoro, Kenya; tenth author: International Maize and Wheat Improvement Center (CIMMYT)-Kenya, Nairobi, Kenya; eleventh author: CIMMYT-Ethiopia, Addis Ababa, Ethiopia; twelfth and thirteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; and fourteenth author: Agriculture and Agri-Food Canada, Brandon, Manitoba, Canada
| | - Mogens S Hovmøller
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and fifteenth authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth and ninth authors: Kenya Agricultural and Livestock Research Organization, Njoro, Kenya; tenth author: International Maize and Wheat Improvement Center (CIMMYT)-Kenya, Nairobi, Kenya; eleventh author: CIMMYT-Ethiopia, Addis Ababa, Ethiopia; twelfth and thirteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; and fourteenth author: Agriculture and Agri-Food Canada, Brandon, Manitoba, Canada
| | - Thomas G Fetch
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and fifteenth authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth and ninth authors: Kenya Agricultural and Livestock Research Organization, Njoro, Kenya; tenth author: International Maize and Wheat Improvement Center (CIMMYT)-Kenya, Nairobi, Kenya; eleventh author: CIMMYT-Ethiopia, Addis Ababa, Ethiopia; twelfth and thirteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; and fourteenth author: Agriculture and Agri-Food Canada, Brandon, Manitoba, Canada
| | - Yue Jin
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and fifteenth authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth and ninth authors: Kenya Agricultural and Livestock Research Organization, Njoro, Kenya; tenth author: International Maize and Wheat Improvement Center (CIMMYT)-Kenya, Nairobi, Kenya; eleventh author: CIMMYT-Ethiopia, Addis Ababa, Ethiopia; twelfth and thirteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; and fourteenth author: Agriculture and Agri-Food Canada, Brandon, Manitoba, Canada
| |
Collapse
|
13
|
Newcomb M, Olivera PD, Rouse MN, Szabo LJ, Johnson J, Gale S, Luster DG, Wanyera R, Macharia G, Bhavani S, Hodson D, Patpour M, Hovmøller MS, Fetch TG, Jin Y. Kenyan Isolates of Puccinia graminis f. sp. tritici from 2008 to 2014: Virulence to SrTmp in the Ug99 Race Group and Implications for Breeding Programs. Phytopathology 2016; 106:729-736. [PMID: 27019064 DOI: 10.1094/pdis-06-15-0668-pdn] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/22/2023]
Abstract
Frequent emergence of new variants in the Puccinia graminis f. sp. tritici Ug99 race group in Kenya has made pathogen survey a priority. We analyzed 140 isolates from 78 P. graminis f. sp. tritici samples collected in Kenya between 2008 and 2014 and identified six races, including three not detected prior to 2013. Genotypic analysis of 20 isolates from 2013 and 2014 collections showed that the new races TTHST, TTKTK, and TTKTT belong to the Ug99 race group. International advanced breeding lines were evaluated against an isolate of TTKTT (Sr31, Sr24, and SrTmp virulence) at the seedling stage. From 169 advanced lines from Kenya, 23% of lines with resistance to races TTKSK and TTKST were susceptible to TTKTT and, from two North American regional nurseries, 44 and 91% of resistant lines were susceptible. Three lines with combined resistance genes were developed to facilitate pathogen monitoring and race identification. These results indicate the increasing virulence and variability in the Kenyan P. graminis f. sp. tritici population and reveal vulnerabilities of elite germplasm to new races.
Collapse
Affiliation(s)
- Maria Newcomb
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and fifteenth authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth and ninth authors: Kenya Agricultural and Livestock Research Organization, Njoro, Kenya; tenth author: International Maize and Wheat Improvement Center (CIMMYT)-Kenya, Nairobi, Kenya; eleventh author: CIMMYT-Ethiopia, Addis Ababa, Ethiopia; twelfth and thirteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; and fourteenth author: Agriculture and Agri-Food Canada, Brandon, Manitoba, Canada
| | - Pablo D Olivera
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and fifteenth authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth and ninth authors: Kenya Agricultural and Livestock Research Organization, Njoro, Kenya; tenth author: International Maize and Wheat Improvement Center (CIMMYT)-Kenya, Nairobi, Kenya; eleventh author: CIMMYT-Ethiopia, Addis Ababa, Ethiopia; twelfth and thirteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; and fourteenth author: Agriculture and Agri-Food Canada, Brandon, Manitoba, Canada
| | - Matthew N Rouse
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and fifteenth authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth and ninth authors: Kenya Agricultural and Livestock Research Organization, Njoro, Kenya; tenth author: International Maize and Wheat Improvement Center (CIMMYT)-Kenya, Nairobi, Kenya; eleventh author: CIMMYT-Ethiopia, Addis Ababa, Ethiopia; twelfth and thirteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; and fourteenth author: Agriculture and Agri-Food Canada, Brandon, Manitoba, Canada
| | - Les J Szabo
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and fifteenth authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth and ninth authors: Kenya Agricultural and Livestock Research Organization, Njoro, Kenya; tenth author: International Maize and Wheat Improvement Center (CIMMYT)-Kenya, Nairobi, Kenya; eleventh author: CIMMYT-Ethiopia, Addis Ababa, Ethiopia; twelfth and thirteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; and fourteenth author: Agriculture and Agri-Food Canada, Brandon, Manitoba, Canada
| | - Jerry Johnson
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and fifteenth authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth and ninth authors: Kenya Agricultural and Livestock Research Organization, Njoro, Kenya; tenth author: International Maize and Wheat Improvement Center (CIMMYT)-Kenya, Nairobi, Kenya; eleventh author: CIMMYT-Ethiopia, Addis Ababa, Ethiopia; twelfth and thirteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; and fourteenth author: Agriculture and Agri-Food Canada, Brandon, Manitoba, Canada
| | - Sam Gale
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and fifteenth authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth and ninth authors: Kenya Agricultural and Livestock Research Organization, Njoro, Kenya; tenth author: International Maize and Wheat Improvement Center (CIMMYT)-Kenya, Nairobi, Kenya; eleventh author: CIMMYT-Ethiopia, Addis Ababa, Ethiopia; twelfth and thirteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; and fourteenth author: Agriculture and Agri-Food Canada, Brandon, Manitoba, Canada
| | - Douglas G Luster
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and fifteenth authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth and ninth authors: Kenya Agricultural and Livestock Research Organization, Njoro, Kenya; tenth author: International Maize and Wheat Improvement Center (CIMMYT)-Kenya, Nairobi, Kenya; eleventh author: CIMMYT-Ethiopia, Addis Ababa, Ethiopia; twelfth and thirteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; and fourteenth author: Agriculture and Agri-Food Canada, Brandon, Manitoba, Canada
| | - Ruth Wanyera
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and fifteenth authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth and ninth authors: Kenya Agricultural and Livestock Research Organization, Njoro, Kenya; tenth author: International Maize and Wheat Improvement Center (CIMMYT)-Kenya, Nairobi, Kenya; eleventh author: CIMMYT-Ethiopia, Addis Ababa, Ethiopia; twelfth and thirteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; and fourteenth author: Agriculture and Agri-Food Canada, Brandon, Manitoba, Canada
| | - Godwin Macharia
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and fifteenth authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth and ninth authors: Kenya Agricultural and Livestock Research Organization, Njoro, Kenya; tenth author: International Maize and Wheat Improvement Center (CIMMYT)-Kenya, Nairobi, Kenya; eleventh author: CIMMYT-Ethiopia, Addis Ababa, Ethiopia; twelfth and thirteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; and fourteenth author: Agriculture and Agri-Food Canada, Brandon, Manitoba, Canada
| | - Sridhar Bhavani
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and fifteenth authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth and ninth authors: Kenya Agricultural and Livestock Research Organization, Njoro, Kenya; tenth author: International Maize and Wheat Improvement Center (CIMMYT)-Kenya, Nairobi, Kenya; eleventh author: CIMMYT-Ethiopia, Addis Ababa, Ethiopia; twelfth and thirteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; and fourteenth author: Agriculture and Agri-Food Canada, Brandon, Manitoba, Canada
| | - David Hodson
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and fifteenth authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth and ninth authors: Kenya Agricultural and Livestock Research Organization, Njoro, Kenya; tenth author: International Maize and Wheat Improvement Center (CIMMYT)-Kenya, Nairobi, Kenya; eleventh author: CIMMYT-Ethiopia, Addis Ababa, Ethiopia; twelfth and thirteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; and fourteenth author: Agriculture and Agri-Food Canada, Brandon, Manitoba, Canada
| | - Mehran Patpour
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and fifteenth authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth and ninth authors: Kenya Agricultural and Livestock Research Organization, Njoro, Kenya; tenth author: International Maize and Wheat Improvement Center (CIMMYT)-Kenya, Nairobi, Kenya; eleventh author: CIMMYT-Ethiopia, Addis Ababa, Ethiopia; twelfth and thirteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; and fourteenth author: Agriculture and Agri-Food Canada, Brandon, Manitoba, Canada
| | - Mogens S Hovmøller
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and fifteenth authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth and ninth authors: Kenya Agricultural and Livestock Research Organization, Njoro, Kenya; tenth author: International Maize and Wheat Improvement Center (CIMMYT)-Kenya, Nairobi, Kenya; eleventh author: CIMMYT-Ethiopia, Addis Ababa, Ethiopia; twelfth and thirteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; and fourteenth author: Agriculture and Agri-Food Canada, Brandon, Manitoba, Canada
| | - Thomas G Fetch
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and fifteenth authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth and ninth authors: Kenya Agricultural and Livestock Research Organization, Njoro, Kenya; tenth author: International Maize and Wheat Improvement Center (CIMMYT)-Kenya, Nairobi, Kenya; eleventh author: CIMMYT-Ethiopia, Addis Ababa, Ethiopia; twelfth and thirteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; and fourteenth author: Agriculture and Agri-Food Canada, Brandon, Manitoba, Canada
| | - Yue Jin
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and fifteenth authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth and ninth authors: Kenya Agricultural and Livestock Research Organization, Njoro, Kenya; tenth author: International Maize and Wheat Improvement Center (CIMMYT)-Kenya, Nairobi, Kenya; eleventh author: CIMMYT-Ethiopia, Addis Ababa, Ethiopia; twelfth and thirteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; and fourteenth author: Agriculture and Agri-Food Canada, Brandon, Manitoba, Canada
| |
Collapse
|
14
|
Olivera P, Newcomb M, Szabo LJ, Rouse M, Johnson J, Gale S, Luster DG, Hodson D, Cox JA, Burgin L, Hort M, Gilligan CA, Patpour M, Justesen AF, Hovmøller MS, Woldeab G, Hailu E, Hundie B, Tadesse K, Pumphrey M, Singh RP, Jin Y. Phenotypic and Genotypic Characterization of Race TKTTF of Puccinia graminis f. sp. tritici that Caused a Wheat Stem Rust Epidemic in Southern Ethiopia in 2013-14. Phytopathology 2015; 105:917-28. [PMID: 25775107 DOI: 10.1094/phyto-11-14-0302-fi] [Citation(s) in RCA: 99] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/20/2023]
Abstract
A severe stem rust epidemic occurred in southern Ethiopia during November 2013 to January 2014, with yield losses close to 100% on the most widely grown wheat cultivar, 'Digalu'. Sixty-four stem rust samples collected from the regions were analyzed. A meteorological model for airborne spore dispersal was used to identify which regions were most likely to have been infected from postulated sites of initial infection. Based on the analyses of 106 single-pustule isolates derived from these samples, four races of Puccinia graminis f. sp. tritici were identified: TKTTF, TTKSK, RRTTF, and JRCQC. Race TKTTF was found to be the primary cause of the epidemic in the southeastern zones of Bale and Arsi. Isolates of race TKTTF were first identified in samples collected in early October 2013 from West Arsi. It was the sole or predominant race in 31 samples collected from Bale and Arsi zones after the stem rust epidemic was established. Race TTKSK was recovered from 15 samples from Bale and Arsi zones at low frequencies. Genotyping indicated that isolates of race TKTTF belongs to a genetic lineage that is different from the Ug99 race group and is composed of two distinct genetic types. Results from evaluation of selected germplasm indicated that some cultivars and breeding lines resistant to the Ug99 race group are susceptible to race TKTTF. Appearance of race TKTTF and the ensuing epidemic underlines the continuing threats and challenges posed by stem rust not only in East Africa but also to wider-scale wheat production.
Collapse
Affiliation(s)
- Pablo Olivera
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and twenty-second authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth author: International Maize and Wheat Improvement Center (CIMMYT)-Ethiopia, Addis Ababa, Ethiopia; ninth and twelfth authors: Department of Plant Sciences, University of Cambridge, Downing Street, Cambridge, CB2 3EA, United Kingdom; tenth and eleventh authors: U.K. Met Office, Fitzroy Road, Exeter, Devon, EX1 3PB, United Kingdom; thirteenth, fourteenth, and fifteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; sixteenth and seventeenth authors: Ethiopian Institute of Agricultural Research, Ambo Agricultural Research Center, Ethiopia; eighteenth author: Ethiopian Institute of Agricultural Research, Kulumsa Agricultural Research Center, Assela, Ethiopia; nineteenth and twentieth authors: Department of Crop and Soil Sciences, Washington State University, Pullman 99164; and twenty-first author: CIMMYT, Apdo. Postal 6-641 06600 Mexico, D.F., Mexico
| | - Maria Newcomb
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and twenty-second authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth author: International Maize and Wheat Improvement Center (CIMMYT)-Ethiopia, Addis Ababa, Ethiopia; ninth and twelfth authors: Department of Plant Sciences, University of Cambridge, Downing Street, Cambridge, CB2 3EA, United Kingdom; tenth and eleventh authors: U.K. Met Office, Fitzroy Road, Exeter, Devon, EX1 3PB, United Kingdom; thirteenth, fourteenth, and fifteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; sixteenth and seventeenth authors: Ethiopian Institute of Agricultural Research, Ambo Agricultural Research Center, Ethiopia; eighteenth author: Ethiopian Institute of Agricultural Research, Kulumsa Agricultural Research Center, Assela, Ethiopia; nineteenth and twentieth authors: Department of Crop and Soil Sciences, Washington State University, Pullman 99164; and twenty-first author: CIMMYT, Apdo. Postal 6-641 06600 Mexico, D.F., Mexico
| | - Les J Szabo
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and twenty-second authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth author: International Maize and Wheat Improvement Center (CIMMYT)-Ethiopia, Addis Ababa, Ethiopia; ninth and twelfth authors: Department of Plant Sciences, University of Cambridge, Downing Street, Cambridge, CB2 3EA, United Kingdom; tenth and eleventh authors: U.K. Met Office, Fitzroy Road, Exeter, Devon, EX1 3PB, United Kingdom; thirteenth, fourteenth, and fifteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; sixteenth and seventeenth authors: Ethiopian Institute of Agricultural Research, Ambo Agricultural Research Center, Ethiopia; eighteenth author: Ethiopian Institute of Agricultural Research, Kulumsa Agricultural Research Center, Assela, Ethiopia; nineteenth and twentieth authors: Department of Crop and Soil Sciences, Washington State University, Pullman 99164; and twenty-first author: CIMMYT, Apdo. Postal 6-641 06600 Mexico, D.F., Mexico
| | - Matthew Rouse
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and twenty-second authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth author: International Maize and Wheat Improvement Center (CIMMYT)-Ethiopia, Addis Ababa, Ethiopia; ninth and twelfth authors: Department of Plant Sciences, University of Cambridge, Downing Street, Cambridge, CB2 3EA, United Kingdom; tenth and eleventh authors: U.K. Met Office, Fitzroy Road, Exeter, Devon, EX1 3PB, United Kingdom; thirteenth, fourteenth, and fifteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; sixteenth and seventeenth authors: Ethiopian Institute of Agricultural Research, Ambo Agricultural Research Center, Ethiopia; eighteenth author: Ethiopian Institute of Agricultural Research, Kulumsa Agricultural Research Center, Assela, Ethiopia; nineteenth and twentieth authors: Department of Crop and Soil Sciences, Washington State University, Pullman 99164; and twenty-first author: CIMMYT, Apdo. Postal 6-641 06600 Mexico, D.F., Mexico
| | - Jerry Johnson
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and twenty-second authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth author: International Maize and Wheat Improvement Center (CIMMYT)-Ethiopia, Addis Ababa, Ethiopia; ninth and twelfth authors: Department of Plant Sciences, University of Cambridge, Downing Street, Cambridge, CB2 3EA, United Kingdom; tenth and eleventh authors: U.K. Met Office, Fitzroy Road, Exeter, Devon, EX1 3PB, United Kingdom; thirteenth, fourteenth, and fifteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; sixteenth and seventeenth authors: Ethiopian Institute of Agricultural Research, Ambo Agricultural Research Center, Ethiopia; eighteenth author: Ethiopian Institute of Agricultural Research, Kulumsa Agricultural Research Center, Assela, Ethiopia; nineteenth and twentieth authors: Department of Crop and Soil Sciences, Washington State University, Pullman 99164; and twenty-first author: CIMMYT, Apdo. Postal 6-641 06600 Mexico, D.F., Mexico
| | - Samuel Gale
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and twenty-second authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth author: International Maize and Wheat Improvement Center (CIMMYT)-Ethiopia, Addis Ababa, Ethiopia; ninth and twelfth authors: Department of Plant Sciences, University of Cambridge, Downing Street, Cambridge, CB2 3EA, United Kingdom; tenth and eleventh authors: U.K. Met Office, Fitzroy Road, Exeter, Devon, EX1 3PB, United Kingdom; thirteenth, fourteenth, and fifteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; sixteenth and seventeenth authors: Ethiopian Institute of Agricultural Research, Ambo Agricultural Research Center, Ethiopia; eighteenth author: Ethiopian Institute of Agricultural Research, Kulumsa Agricultural Research Center, Assela, Ethiopia; nineteenth and twentieth authors: Department of Crop and Soil Sciences, Washington State University, Pullman 99164; and twenty-first author: CIMMYT, Apdo. Postal 6-641 06600 Mexico, D.F., Mexico
| | - Douglas G Luster
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and twenty-second authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth author: International Maize and Wheat Improvement Center (CIMMYT)-Ethiopia, Addis Ababa, Ethiopia; ninth and twelfth authors: Department of Plant Sciences, University of Cambridge, Downing Street, Cambridge, CB2 3EA, United Kingdom; tenth and eleventh authors: U.K. Met Office, Fitzroy Road, Exeter, Devon, EX1 3PB, United Kingdom; thirteenth, fourteenth, and fifteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; sixteenth and seventeenth authors: Ethiopian Institute of Agricultural Research, Ambo Agricultural Research Center, Ethiopia; eighteenth author: Ethiopian Institute of Agricultural Research, Kulumsa Agricultural Research Center, Assela, Ethiopia; nineteenth and twentieth authors: Department of Crop and Soil Sciences, Washington State University, Pullman 99164; and twenty-first author: CIMMYT, Apdo. Postal 6-641 06600 Mexico, D.F., Mexico
| | - David Hodson
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and twenty-second authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth author: International Maize and Wheat Improvement Center (CIMMYT)-Ethiopia, Addis Ababa, Ethiopia; ninth and twelfth authors: Department of Plant Sciences, University of Cambridge, Downing Street, Cambridge, CB2 3EA, United Kingdom; tenth and eleventh authors: U.K. Met Office, Fitzroy Road, Exeter, Devon, EX1 3PB, United Kingdom; thirteenth, fourteenth, and fifteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; sixteenth and seventeenth authors: Ethiopian Institute of Agricultural Research, Ambo Agricultural Research Center, Ethiopia; eighteenth author: Ethiopian Institute of Agricultural Research, Kulumsa Agricultural Research Center, Assela, Ethiopia; nineteenth and twentieth authors: Department of Crop and Soil Sciences, Washington State University, Pullman 99164; and twenty-first author: CIMMYT, Apdo. Postal 6-641 06600 Mexico, D.F., Mexico
| | - James A Cox
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and twenty-second authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth author: International Maize and Wheat Improvement Center (CIMMYT)-Ethiopia, Addis Ababa, Ethiopia; ninth and twelfth authors: Department of Plant Sciences, University of Cambridge, Downing Street, Cambridge, CB2 3EA, United Kingdom; tenth and eleventh authors: U.K. Met Office, Fitzroy Road, Exeter, Devon, EX1 3PB, United Kingdom; thirteenth, fourteenth, and fifteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; sixteenth and seventeenth authors: Ethiopian Institute of Agricultural Research, Ambo Agricultural Research Center, Ethiopia; eighteenth author: Ethiopian Institute of Agricultural Research, Kulumsa Agricultural Research Center, Assela, Ethiopia; nineteenth and twentieth authors: Department of Crop and Soil Sciences, Washington State University, Pullman 99164; and twenty-first author: CIMMYT, Apdo. Postal 6-641 06600 Mexico, D.F., Mexico
| | - Laura Burgin
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and twenty-second authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth author: International Maize and Wheat Improvement Center (CIMMYT)-Ethiopia, Addis Ababa, Ethiopia; ninth and twelfth authors: Department of Plant Sciences, University of Cambridge, Downing Street, Cambridge, CB2 3EA, United Kingdom; tenth and eleventh authors: U.K. Met Office, Fitzroy Road, Exeter, Devon, EX1 3PB, United Kingdom; thirteenth, fourteenth, and fifteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; sixteenth and seventeenth authors: Ethiopian Institute of Agricultural Research, Ambo Agricultural Research Center, Ethiopia; eighteenth author: Ethiopian Institute of Agricultural Research, Kulumsa Agricultural Research Center, Assela, Ethiopia; nineteenth and twentieth authors: Department of Crop and Soil Sciences, Washington State University, Pullman 99164; and twenty-first author: CIMMYT, Apdo. Postal 6-641 06600 Mexico, D.F., Mexico
| | - Matt Hort
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and twenty-second authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth author: International Maize and Wheat Improvement Center (CIMMYT)-Ethiopia, Addis Ababa, Ethiopia; ninth and twelfth authors: Department of Plant Sciences, University of Cambridge, Downing Street, Cambridge, CB2 3EA, United Kingdom; tenth and eleventh authors: U.K. Met Office, Fitzroy Road, Exeter, Devon, EX1 3PB, United Kingdom; thirteenth, fourteenth, and fifteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; sixteenth and seventeenth authors: Ethiopian Institute of Agricultural Research, Ambo Agricultural Research Center, Ethiopia; eighteenth author: Ethiopian Institute of Agricultural Research, Kulumsa Agricultural Research Center, Assela, Ethiopia; nineteenth and twentieth authors: Department of Crop and Soil Sciences, Washington State University, Pullman 99164; and twenty-first author: CIMMYT, Apdo. Postal 6-641 06600 Mexico, D.F., Mexico
| | - Christopher A Gilligan
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and twenty-second authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth author: International Maize and Wheat Improvement Center (CIMMYT)-Ethiopia, Addis Ababa, Ethiopia; ninth and twelfth authors: Department of Plant Sciences, University of Cambridge, Downing Street, Cambridge, CB2 3EA, United Kingdom; tenth and eleventh authors: U.K. Met Office, Fitzroy Road, Exeter, Devon, EX1 3PB, United Kingdom; thirteenth, fourteenth, and fifteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; sixteenth and seventeenth authors: Ethiopian Institute of Agricultural Research, Ambo Agricultural Research Center, Ethiopia; eighteenth author: Ethiopian Institute of Agricultural Research, Kulumsa Agricultural Research Center, Assela, Ethiopia; nineteenth and twentieth authors: Department of Crop and Soil Sciences, Washington State University, Pullman 99164; and twenty-first author: CIMMYT, Apdo. Postal 6-641 06600 Mexico, D.F., Mexico
| | - Mehran Patpour
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and twenty-second authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth author: International Maize and Wheat Improvement Center (CIMMYT)-Ethiopia, Addis Ababa, Ethiopia; ninth and twelfth authors: Department of Plant Sciences, University of Cambridge, Downing Street, Cambridge, CB2 3EA, United Kingdom; tenth and eleventh authors: U.K. Met Office, Fitzroy Road, Exeter, Devon, EX1 3PB, United Kingdom; thirteenth, fourteenth, and fifteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; sixteenth and seventeenth authors: Ethiopian Institute of Agricultural Research, Ambo Agricultural Research Center, Ethiopia; eighteenth author: Ethiopian Institute of Agricultural Research, Kulumsa Agricultural Research Center, Assela, Ethiopia; nineteenth and twentieth authors: Department of Crop and Soil Sciences, Washington State University, Pullman 99164; and twenty-first author: CIMMYT, Apdo. Postal 6-641 06600 Mexico, D.F., Mexico
| | - Annemarie F Justesen
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and twenty-second authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth author: International Maize and Wheat Improvement Center (CIMMYT)-Ethiopia, Addis Ababa, Ethiopia; ninth and twelfth authors: Department of Plant Sciences, University of Cambridge, Downing Street, Cambridge, CB2 3EA, United Kingdom; tenth and eleventh authors: U.K. Met Office, Fitzroy Road, Exeter, Devon, EX1 3PB, United Kingdom; thirteenth, fourteenth, and fifteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; sixteenth and seventeenth authors: Ethiopian Institute of Agricultural Research, Ambo Agricultural Research Center, Ethiopia; eighteenth author: Ethiopian Institute of Agricultural Research, Kulumsa Agricultural Research Center, Assela, Ethiopia; nineteenth and twentieth authors: Department of Crop and Soil Sciences, Washington State University, Pullman 99164; and twenty-first author: CIMMYT, Apdo. Postal 6-641 06600 Mexico, D.F., Mexico
| | - Mogens S Hovmøller
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and twenty-second authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth author: International Maize and Wheat Improvement Center (CIMMYT)-Ethiopia, Addis Ababa, Ethiopia; ninth and twelfth authors: Department of Plant Sciences, University of Cambridge, Downing Street, Cambridge, CB2 3EA, United Kingdom; tenth and eleventh authors: U.K. Met Office, Fitzroy Road, Exeter, Devon, EX1 3PB, United Kingdom; thirteenth, fourteenth, and fifteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; sixteenth and seventeenth authors: Ethiopian Institute of Agricultural Research, Ambo Agricultural Research Center, Ethiopia; eighteenth author: Ethiopian Institute of Agricultural Research, Kulumsa Agricultural Research Center, Assela, Ethiopia; nineteenth and twentieth authors: Department of Crop and Soil Sciences, Washington State University, Pullman 99164; and twenty-first author: CIMMYT, Apdo. Postal 6-641 06600 Mexico, D.F., Mexico
| | - Getaneh Woldeab
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and twenty-second authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth author: International Maize and Wheat Improvement Center (CIMMYT)-Ethiopia, Addis Ababa, Ethiopia; ninth and twelfth authors: Department of Plant Sciences, University of Cambridge, Downing Street, Cambridge, CB2 3EA, United Kingdom; tenth and eleventh authors: U.K. Met Office, Fitzroy Road, Exeter, Devon, EX1 3PB, United Kingdom; thirteenth, fourteenth, and fifteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; sixteenth and seventeenth authors: Ethiopian Institute of Agricultural Research, Ambo Agricultural Research Center, Ethiopia; eighteenth author: Ethiopian Institute of Agricultural Research, Kulumsa Agricultural Research Center, Assela, Ethiopia; nineteenth and twentieth authors: Department of Crop and Soil Sciences, Washington State University, Pullman 99164; and twenty-first author: CIMMYT, Apdo. Postal 6-641 06600 Mexico, D.F., Mexico
| | - Endale Hailu
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and twenty-second authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth author: International Maize and Wheat Improvement Center (CIMMYT)-Ethiopia, Addis Ababa, Ethiopia; ninth and twelfth authors: Department of Plant Sciences, University of Cambridge, Downing Street, Cambridge, CB2 3EA, United Kingdom; tenth and eleventh authors: U.K. Met Office, Fitzroy Road, Exeter, Devon, EX1 3PB, United Kingdom; thirteenth, fourteenth, and fifteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; sixteenth and seventeenth authors: Ethiopian Institute of Agricultural Research, Ambo Agricultural Research Center, Ethiopia; eighteenth author: Ethiopian Institute of Agricultural Research, Kulumsa Agricultural Research Center, Assela, Ethiopia; nineteenth and twentieth authors: Department of Crop and Soil Sciences, Washington State University, Pullman 99164; and twenty-first author: CIMMYT, Apdo. Postal 6-641 06600 Mexico, D.F., Mexico
| | - Bekele Hundie
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and twenty-second authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth author: International Maize and Wheat Improvement Center (CIMMYT)-Ethiopia, Addis Ababa, Ethiopia; ninth and twelfth authors: Department of Plant Sciences, University of Cambridge, Downing Street, Cambridge, CB2 3EA, United Kingdom; tenth and eleventh authors: U.K. Met Office, Fitzroy Road, Exeter, Devon, EX1 3PB, United Kingdom; thirteenth, fourteenth, and fifteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; sixteenth and seventeenth authors: Ethiopian Institute of Agricultural Research, Ambo Agricultural Research Center, Ethiopia; eighteenth author: Ethiopian Institute of Agricultural Research, Kulumsa Agricultural Research Center, Assela, Ethiopia; nineteenth and twentieth authors: Department of Crop and Soil Sciences, Washington State University, Pullman 99164; and twenty-first author: CIMMYT, Apdo. Postal 6-641 06600 Mexico, D.F., Mexico
| | - Kebede Tadesse
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and twenty-second authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth author: International Maize and Wheat Improvement Center (CIMMYT)-Ethiopia, Addis Ababa, Ethiopia; ninth and twelfth authors: Department of Plant Sciences, University of Cambridge, Downing Street, Cambridge, CB2 3EA, United Kingdom; tenth and eleventh authors: U.K. Met Office, Fitzroy Road, Exeter, Devon, EX1 3PB, United Kingdom; thirteenth, fourteenth, and fifteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; sixteenth and seventeenth authors: Ethiopian Institute of Agricultural Research, Ambo Agricultural Research Center, Ethiopia; eighteenth author: Ethiopian Institute of Agricultural Research, Kulumsa Agricultural Research Center, Assela, Ethiopia; nineteenth and twentieth authors: Department of Crop and Soil Sciences, Washington State University, Pullman 99164; and twenty-first author: CIMMYT, Apdo. Postal 6-641 06600 Mexico, D.F., Mexico
| | - Michael Pumphrey
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and twenty-second authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth author: International Maize and Wheat Improvement Center (CIMMYT)-Ethiopia, Addis Ababa, Ethiopia; ninth and twelfth authors: Department of Plant Sciences, University of Cambridge, Downing Street, Cambridge, CB2 3EA, United Kingdom; tenth and eleventh authors: U.K. Met Office, Fitzroy Road, Exeter, Devon, EX1 3PB, United Kingdom; thirteenth, fourteenth, and fifteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; sixteenth and seventeenth authors: Ethiopian Institute of Agricultural Research, Ambo Agricultural Research Center, Ethiopia; eighteenth author: Ethiopian Institute of Agricultural Research, Kulumsa Agricultural Research Center, Assela, Ethiopia; nineteenth and twentieth authors: Department of Crop and Soil Sciences, Washington State University, Pullman 99164; and twenty-first author: CIMMYT, Apdo. Postal 6-641 06600 Mexico, D.F., Mexico
| | - Ravi P Singh
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and twenty-second authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth author: International Maize and Wheat Improvement Center (CIMMYT)-Ethiopia, Addis Ababa, Ethiopia; ninth and twelfth authors: Department of Plant Sciences, University of Cambridge, Downing Street, Cambridge, CB2 3EA, United Kingdom; tenth and eleventh authors: U.K. Met Office, Fitzroy Road, Exeter, Devon, EX1 3PB, United Kingdom; thirteenth, fourteenth, and fifteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; sixteenth and seventeenth authors: Ethiopian Institute of Agricultural Research, Ambo Agricultural Research Center, Ethiopia; eighteenth author: Ethiopian Institute of Agricultural Research, Kulumsa Agricultural Research Center, Assela, Ethiopia; nineteenth and twentieth authors: Department of Crop and Soil Sciences, Washington State University, Pullman 99164; and twenty-first author: CIMMYT, Apdo. Postal 6-641 06600 Mexico, D.F., Mexico
| | - Yue Jin
- First and second authors: Department of Plant Pathology, University of Minnesota, St. Paul 55108; third, fourth, fifth, sixth, and twenty-second authors: United States Department of Agriculture-Agricultural Research Service (USDA-ARS) Cereal Disease Laboratory, University of Minnesota, St. Paul; seventh author: USDA-ARS Foreign Disease-Weed Science Research Unit, Ft. Detrick, MD 21702; eighth author: International Maize and Wheat Improvement Center (CIMMYT)-Ethiopia, Addis Ababa, Ethiopia; ninth and twelfth authors: Department of Plant Sciences, University of Cambridge, Downing Street, Cambridge, CB2 3EA, United Kingdom; tenth and eleventh authors: U.K. Met Office, Fitzroy Road, Exeter, Devon, EX1 3PB, United Kingdom; thirteenth, fourteenth, and fifteenth authors: Aarhus University, Department of Agroecology, Flakkebjerg, DK4200 Slagelse, Denmark; sixteenth and seventeenth authors: Ethiopian Institute of Agricultural Research, Ambo Agricultural Research Center, Ethiopia; eighteenth author: Ethiopian Institute of Agricultural Research, Kulumsa Agricultural Research Center, Assela, Ethiopia; nineteenth and twentieth authors: Department of Crop and Soil Sciences, Washington State University, Pullman 99164; and twenty-first author: CIMMYT, Apdo. Postal 6-641 06600 Mexico, D.F., Mexico
| |
Collapse
|
15
|
Babiker EM, Gordon TC, Chao S, Newcomb M, Rouse MN, Jin Y, Wanyera R, Acevedo M, Brown-Guedira G, Williamson S, Bonman JM. Mapping resistance to the Ug99 race group of the stem rust pathogen in a spring wheat landrace. Theor Appl Genet 2015; 128:605-12. [PMID: 25599859 DOI: 10.1007/s00122-015-2456-6] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/05/2014] [Accepted: 01/06/2015] [Indexed: 05/20/2023]
Abstract
A new gene for Ug99 resistance from wheat landrace PI 374670 was detected on the long arm of chromosome 7A. Wheat landrace PI 374670 has seedling and field resistance to stem rust caused by Puccinia graminis f. sp tritici Eriks. & E. Henn (Pgt) race TTKSK. To elucidate the inheritance of resistance, 216 BC1F2 families, 192 double haploid (DH) lines, and 185 recombinant inbred lines (RILs) were developed by crossing PI 374670 and the susceptible line LMPG-6. The parents and progeny were evaluated for seedling resistance to Pgt races TTKSK, MCCFC, and TPMKC. The DH lines were tested in field stem rust nurseries in Kenya and Ethiopia. The DH lines were genotyped with the 90K wheat iSelect SNP genotyping platform. Goodness-of-fit tests indicated that a single dominant gene in PI 374670 conditioned seedling resistance to the three Pgt races. The seedling resistance locus mapped to the long arm of chromosome 7A and this result was verified in the RIL population screened with the flanking SNP markers using KASP assays. In the same region, a major QTL for field resistance was detected in a 7.7 cM interval and explained 34-54 and 29-36% of the variation in Kenya and Ethiopia, respectively. Results from tests with specific Pgt races and the csIH81 marker showed that the resistance was not due to Sr22. Thus, a new stem rust resistance gene or allele, either closely linked or allelic to Sr15, is responsible for the seedling and field resistance of PI 374670 to Ug99.
Collapse
Affiliation(s)
- E M Babiker
- Small Grains and Potato Germplasm Research Unit, USDA-ARS, 1691 S 2700 W, Aberdeen, ID, 83210, USA,
| | | | | | | | | | | | | | | | | | | | | |
Collapse
|
16
|
Newcomb M, Acevedo M, Bockelman HE, Brown-Guedira G, Goates BJ, Jackson EW, Jin Y, Njau P, Rouse MN, Singh D, Wanyera R, Bonman JM. Field Resistance to the Ug99 Race Group of the Stem Rust Pathogen in Spring Wheat Landraces. Plant Dis 2013; 97:882-890. [PMID: 30722524 DOI: 10.1094/pdis-02-12-0200-re] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
Wheat landraces provide a source of genetic variability for breeding. The emergence and spread of highly virulent races of the stem rust pathogen (Ug99 race group of Puccinia graminis f. sp. tritici) threaten wheat production globally. Spring wheat landraces were screened for resistance in eight field seasons at the Kenya Agricultural Research Institute, Njoro, where the Ug99 race group has become endemic. Accessions showing resistance in one season were retested and screened with molecular markers associated with resistance genes Sr2, Sr24, Sr36, and Lr34/Yr18; two height-reducing genes; and a photoperiod insensitivity allele. Of 2,509 accessions tested, 278 were categorized as resistant based on results from at least two seasons. Of these resistant accessions, 32 were positive for one or more markers for Sr2, Sr36, Rht-B1b, or Rht-D1b, indicating that they do not fit the definition of "landrace" because these genes were likely introduced via modern breeding practices. Thus, 246 resistant "landrace" accessions were identified. Of countries with more than five tested accessions, Afghanistan, Iran, Portugal, Ethiopia, Uzbekistan, Greece, Tajikistan, Bosnia and Herzegovina, and Serbia had at least 10% of tested accessions that were resistant to the Ug99 race group. Future research will characterize the resistance to determine its novelty and incorporate novel genes into improved lines.
Collapse
Affiliation(s)
- M Newcomb
- United States Department of Agriculture-Agricultural Research Service (USDA-ARS), Small Grains and Potato Germplasm Research Unit, Aberdeen, ID, 83210
| | - M Acevedo
- Department of Plant Pathology, North Dakota State University, Fargo, 58108
| | - H E Bockelman
- USDA-ARS, Small Grains and Potato Germplasm Research Unit
| | - G Brown-Guedira
- USDA-ARS, Eastern Regional Genotyping Laboratory, Raleigh, NC, 27695
| | - B J Goates
- USDA-ARS, Small Grains and Potato Germplasm Research Unit
| | - E W Jackson
- USDA-ARS, Small Grains and Potato Germplasm Research Unit
| | - Y Jin
- USDA-ARS, Cereal Disease Laboratory, University of Minnesota, St. Paul, MN, 55108
| | - P Njau
- Kenya Agricultural Research Institute, Njoro, Kenya
| | | | - D Singh
- Plant Breeding Institute, The University of Sydney, NSW, Australia
| | - R Wanyera
- Kenya Agricultural Research Institute
| | - J M Bonman
- USDA-ARS Small Grains and Potato Germplasm Research Unit
| |
Collapse
|
17
|
Mustanski B, Newcomb M, Garofalo R. Mental health of lesbian, gay, and bisexual youth: A developmental resiliency perspective. J Gay Lesbian Soc Serv 2011; 23:204-225. [PMID: 21731405 PMCID: PMC3126101 DOI: 10.1080/10538720.2011.561474] [Citation(s) in RCA: 75] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/03/2023]
Abstract
Research suggests that lesbian, gay, and bisexual (LGB) youth are at increased risk for both victimization and internalizing mental health problems, but limited research has studied their association or factors that increase resilience. The sample included 425 LGBs between the ages of 16 and 24 year. The majority had disclosed their sexual orientation to family or friends (98%) and 97% had someone in their lives who was accepting. Racial/ethnic minority and female participants in general reported lower levels of disclosure and acceptance. Most participants reported some form of sexual orientation-related victimization (94%). Victimization was associated with psychological distress, but a compensatory model indicated that in the context of this victimization both peer and family support had significant promotive effects. A test of a protective model found social support did not ameliorate negative effects of victimization. The positive effects of family support decreased with age. Peer and family support were particularly important, but they did not significantly dampen the negative effects of victimization. Our findings suggest that mental health professionals working with LGB youth should address social support and that public health approaches are needed to reduce levels of victimization.
Collapse
Affiliation(s)
- Brian Mustanski
- University of Illinois, Department of Psychiatry, Office #252, 1747 W. Roosevelt Rd., Chicago, IL 60608
| | | | | |
Collapse
|
18
|
Abstract
[reaction: see text] N-Aryl-5,5-diphenyl-4-pentenamidyl radicals (3) were produced by 266 nm laser-flash photolysis of the corresponding N-(phenylthio) derivatives, and the rate constants for the cyclizations of these radicals were measured directly. The 5-exo cyclization reactions were fast (k(c) > 2 x 10(5) s(-1)), and radicals 3 generally behaved as electrophilic reactants with a Hammett correlation of rho = 1.9 for five of the six radicals studied. However, the p-methoxyphenyl-substituted radical 3f cyclized much faster than expected from the Hammett analysis. Variable temperature studies of parent radical 3a (aryl = phenyl) gave an Arrhenius function with log k = 9.2 - 4.4/2.3RT (kcal/mol). The rate constant for the reaction of p-ethylphenyl-substituted anilidyl radical 3b with Bu(3)SnH at 65 degrees C was k(T) = 4 x 10(5) M(-1) s(-1).
Collapse
Affiliation(s)
- E Martinez
- Department of Chemistry, University of Illinois at Chicago, 845 West Taylor Street, Chicago, Illinois 60607, USA
| | | |
Collapse
|
19
|
|
20
|
|
21
|
|
22
|
Affiliation(s)
- J H Horner
- Department of Chemistry, Wayne State University Detroit, Michigan 48202, USA
| | | |
Collapse
|
23
|
Bales BC, Horner JH, Huang X, Newcomb M, Crich D, Greenberg MM. Product studies and laser flash photolysis on alkyl radicals containing two different beta-leaving groups are consonant with the formation of an olefin cation radical. J Am Chem Soc 2001; 123:3623-9. [PMID: 11457093 DOI: 10.1021/ja0042938] [Citation(s) in RCA: 31] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
1-Bromo-2-methoxy-1-phenylpropan-2-yl (3) and 2-methoxy-1-phenyl-1-diphenylphosphatopropan-2-yl (4) were generated under continual photolysis from the respective PTOC precursors in a mixture of acetonitrile and methanol. The radicals undergo heterolytic fragmentation of the substituent in the beta-position to generate the olefin cation radical (5). Z-2-Methoxy-1-phenylpropene (15) is the major product formed in the presence of 1,4-cyclohexadiene, and is believed to result from hydrogen atom transfer to the oxygen of the olefin cation radical, followed by deprotonation. Laser flash photolysis experiments indicate that reaction between 5 and 1,4-cyclohexadiene occurs with a rate constant of approximately 6 x 10(5) M(-1) s(-1). 2,2-Dimethoxy-1-phenylpropane (18) is observed as a minor product. Laser flash photolysis experiments place an upper limit on methanol trapping of 5 at k <1 x 10(3) M(-1) s(-1) and do not provide any evidence for the formation of reactive intermediates other than 5. The use of two PTOC precursors containing different leaving groups to generate a common olefin cation radical enables one to utilize product analysis to probe for the intermediacy of other reactive intermediates. The ratio of 15:18 is dependent upon hydrogen atom donor concentration, but is independent of the PTOC precursor. These observations are consistent with the proposal that both products result from trapping of 5 that is formed via heterolysis of 3 and 4.
Collapse
Affiliation(s)
- B C Bales
- Department of Chemistry, Colorado State University, Fort Collins, Colorado 80523, USA
| | | | | | | | | | | |
Collapse
|
24
|
Latimer WW, Newcomb M, Winters KC, Stinchfield RD. Adolescent substance abuse treatment outcome: the role of substance abuse problem severity, psychosocial, and treatment factors. J Consult Clin Psychol 2000; 68:684-96. [PMID: 10965643] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/17/2023]
Abstract
A structural equation model incorporating substance abuse problem severity, psychosocial risk and protection, and treatment variables examined adolescent drug abuse treatment outcome pathways across 6- and 12-month follow-up points. Findings on resiliency factors and an empirical method adapted from previous research were used to select and assign 10 psychosocial factors to either a multiple protective factor index or a risk factor index. Gender, substance abuse problem severity, treatment modality, treatment length, and aftercare participation were also examined as outcome predictors. The findings suggest that treatment intensity decisions may be better informed by pretreatment psychosocial risk level rather than by substance abuse problem severity. The present study also suggests that drug-abusing adolescents who receive sufficiently long treatment, participate in aftercare, and possess at least 1 individual or interpersonal protective factor during their recovery process have the best chance to maintain gains made during treatment.
Collapse
Affiliation(s)
- W W Latimer
- Institute on Community Integration, University of Minnesota, USA
| | | | | | | |
Collapse
|
25
|
Abstract
The title probes are precursors to kinetically calibrated, aryl-substituted cyclopropylcarbinyl radicals that rearrange with picosecond lifetimes. Applications in studies of cytochrome P450-catalyzed hydroxylation reactions are reviewed. Initially confusing results regarding lifetimes of radicals in the hydroxylation reactions were resolved when second-generation probes that distinguish between radicals and cations were employed. The results indicate that two electrophilic oxidizing species are involved in P450-catalyzed hydroxylations, an iron-oxo species that inserts oxygen and a hydroperoxo-iron species that inserts OH(+). The cationic rearrangement products are ascribed to reactions of the protonated alcohol products formed from the latter.
Collapse
Affiliation(s)
- M Newcomb
- Department of Chemistry, Wayne State University, Detroit, Michigan 48202, USA
| | | |
Collapse
|
26
|
Abstract
This article describes a continuous quality improvement team's efforts to reduce the number of patients at risk for developing a postoperative ileus. This study was limited to patients who underwent a surgical procedure that did not involve the bowel. Patients who developed an ileus after the surgical procedure (study group) were compared with patients who did not develop an ileus after the same procedure (control group). Principal factors associated with a postoperative ileus included a low serum albumin level, excessive use of narcotics, and a history of a previous gastrointestinal condition. Practice changes were made as a result of these findings. A follow-up chart review revealed a decrease in the postoperative ileus rate.
Collapse
|
27
|
Whitted PO, Horner JH, Newcomb M, Huang X, Crich D. Heterolytic cleavage of a beta-phosphatoxyalkyl radical resulting in phosphate migration or radical cation formation as a function of solvent polarity. Org Lett 1999; 1:153-6. [PMID: 10822551 DOI: 10.1021/ol990054h] [Citation(s) in RCA: 42] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
[formula: see text] The 2-(diethylphosphatoxy)-2-(p-methoxyphenyl)-1,1-dimethylethyl radical (1) reacted to give the benzylic radical product from phosphate migration or a radical cation (or a mixture of the two) as a function of solvent. Smooth acceleration in rates of reactions of 1 in solvents of increasing polarity and consistent entropies of activation indicate that radical 1 reacts by common mechanism irrespective of the final products formed, specifically by initial heterolysis to a radical cation-phosphate anion pair.
Collapse
Affiliation(s)
- P O Whitted
- Department of Chemistry, Wayne State University, Detroit, Michigan 48202, USA
| | | | | | | | | |
Collapse
|
28
|
Valentine AM, LeTadic-Biadatti MH, Toy PH, Newcomb M, Lippard SJ. Oxidation of ultrafast radical clock substrate probes by the soluble methane monooxygenase from Methylococcus capsulatus (Bath). J Biol Chem 1999; 274:10771-6. [PMID: 10196150 DOI: 10.1074/jbc.274.16.10771] [Citation(s) in RCA: 65] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022] Open
Abstract
Radical clock substrate probes were used to assess the viability of a discrete substrate radical species in the mechanism of hydrocarbon oxidation by the soluble methane monooxygenase (sMMO) from Methylococcus capsulatus (Bath). New substituted cyclopropane probes were used with very fast ring-opening rate constants and other desirable attributes, such as the ability to discriminate between radical and cationic intermediates. Oxidation of these substrates by a reconstituted sMMO system resulted in no rearranged products, allowing an upper limit of 150 fs to be placed on the lifetime of a putative radical species. This limit strongly suggests that there is no such substrate radical intermediate. The two enantiomers of trans-1-methyl-2-phenyl-cyclopropane were prepared, and the regioselectivity of their oxidation to the corresponding cyclopropylmethanol and cyclopropylphenol products was determined. The results are consistent with selective orientation of the two enantiomeric substrates in the hydrophobic cavity at the active site of sMMO, specific models for which were examined by molecular modeling.
Collapse
Affiliation(s)
- A M Valentine
- Department of Chemistry, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, USA
| | | | | | | | | |
Collapse
|
29
|
Abstract
The oxidation of hypersensitive radical probes by chloroperoxidase from Caldariomyces fumago (CPO) was studied in an attempt to "time" a putative radical intermediate. Oxidation of (trans-2-phenylcyclopropyl)methane, previously studied by Zaks and Dodds [Zaks, A., and Dodds, D. R. (1995) J. Am. Chem. Soc. 115, 10419-10424] was reinvestigated. Unrearranged oxidation products were found as previously reported, and control experiments demonstrated that the cyclic alcohol from oxidation at the cyclopropylcarbinyl position, while subject to further oxidation, survives CPO oxidation as detectable species. However, in contrast to the report by Zaks and Dodds, the rearranged alcohol product expected from ring opening of a cyclopropylcarbinyl radical intermediate was shown to be unstable toward the enzyme oxidation reaction. Because of this instability, two new hypersensitive radical probes, (trans-2-phenylcyclopropyl)ethane and 2-(trans-2-phenylcyclopropyl)propane, and their potential cyclic and acyclic products from oxidation at the cyclopropylcarbinyl position were synthesized and tested. Oxidation of both of these probes at the cyclopropylcarbinyl position by CPO gave unrearranged alcohol products only, but control experiments again demonstrated that the rearranged alcohol products were unstable toward CPO oxidation conditions. From the combination of the probe and control studies, the lifetime of a putative radical intermediate must be less than 3 ps. Whereas the results are consistent with an insertion mechanism for production of alcohol product, they do not exclude a very short-lived intermediate.
Collapse
Affiliation(s)
- P H Toy
- Department of Chemistry, Wayne State University, 5101 Cass Avenue, Detroit, Michigan 48202, USA
| | | | | |
Collapse
|
30
|
Shapiro S, Newcomb M, Loeb TB. Fear of fat, disregulated-restrained eating, and body-esteem: prevalence and gender differences among eight- to ten-year-old children. J Clin Child Psychol 1997; 26:358-65. [PMID: 9418174 DOI: 10.1207/s15374424jccp2604_4] [Citation(s) in RCA: 65] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
Abstract
Examined whether: (a) societal directives to be thin are perceived among children, (b) discontent with body and attitudes and behaviors associated with eating disorders begin before adolescence, and (c) these differ by sex. These issues were assessed in 239 Grade 3 students. Scales of eating and weight attitudes and behaviors for this under-studied population were either created or modified from existing instruments. These 8- to 10-year-old children expressed weight, dieting, and physique concerns that reflect Western sociocultural values and preoccupation with body weight and dieting. Sex differences were examined and revealed several but not very reliable distinctions at this young age. These findings appear to be consistent with research on adolescents. The components that may lead to the development of an eating disorder or disregulated-restrained eating in a vulnerable adolescent may be both internalized and expressed at a very early age.
Collapse
Affiliation(s)
- S Shapiro
- Division of Counseling Psychology, University of Southern California, Los Angeles, USA
| | | | | |
Collapse
|
31
|
Atkinson JK, Hollenberg PF, Ingold KU, Johnson CC, Le Tadic MH, Newcomb M, Putt DA. Cytochrome P450-catalyzed hydroxylation of hydrocarbons: kinetic deuterium isotope effects for the hydroxylation of an ultrafast radical clock. Biochemistry 1994; 33:10630-7. [PMID: 8075063 DOI: 10.1021/bi00201a009] [Citation(s) in RCA: 75] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
Abstract
The ultrafast radical clock probe trans-1-methyl-2-phenylcyclopropane (1CH3) and its mono-, di-, and trideuteriomethyl analogues were oxidized by phenobarbital-induced rat liver microsomal enzymes. This cytochrome P450-catalyzed hydroxylation of 1CH3 gave three products: the alcohol trans-(2-phenylcyclopropyl)methanol (2), the rearranged alcohol 1-phenylbut-3-en-1-ol (3), and the phenol trans-2-(p-hydroxyphenyl)-1-methylcyclopropane (4). The identification of both the unrearranged and rearranged products of oxidation, 2 and 3, is consistent with the formation of a radical intermediate via a hydrogen atom abstraction from the methyl group by the catalytically active iron-oxo center. Hydroxylation of three deuteriomethyl forms of 1CH3 produced the analogous deuterated products, although in different amounts of each. Perdeuteration of the methyl group (1CD3) disfavored oxidation at the methyl group and caused an increase in the oxidation of the phenyl ring (metabolic switching). By comparing the amounts of alcohols and phenol formed from the individual, noncompetitive oxidation of 1CH3 and 1CD3 the overall (i.e., combined primary and secondary) deuterium kinetic isotope effect (DKIE) was found to be 12.5. Intramolecular DKIEs for 1CHD2 and 1CH2D were 2.9 and 13.2, respectively. From these results, the primary and secondary DKIEs were calculated to be 7.87 and 1.26, respectively, values that indicate that there is extensive C--H bond stretching in the transition state for the rate-controlling step in P450-catalyzed hydroxylation of 1CH3.(ABSTRACT TRUNCATED AT 250 WORDS)
Collapse
Affiliation(s)
- J K Atkinson
- National Research Council of Canada, Steacie Institute for Molecular Sciences, Ottawa, Ontario
| | | | | | | | | | | | | |
Collapse
|
32
|
Newcomb M. Hypersensitive radical probes. J Inorg Biochem 1993. [DOI: 10.1016/0162-0134(93)85254-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
|
33
|
Abstract
A community sample of 111 women's retrospective reports of childhood sexual abuse was examined in an effort to understand the circumstances and coping strategies that mediated the immediate and lasting effects of those stressful experiences. Aspects of single or multiple abuse incidents were captured in 11 variables, each reflecting 1 of 3 domains: circumstances of abuse, mediators, and outcomes (the negative effects of abuse). Observed variable simultaneous path analysis models revealed several direct and mediated influences on the outcomes. Long-term negative outcomes of abuse were directly affected by a close relationship to the perpetrator and severity of abuse from the circumstance of abuse domain, and immediate negative responses, self-blame, and nondisclosure regarding the incident from the mediational domain. The importance of examining factors that mediate the negative effects of child sexual abuse is discussed.
Collapse
Affiliation(s)
- G E Wyatt
- Neuropsychiatric Institute, University of California, Los Angeles 90024
| | | |
Collapse
|
34
|
Abstract
A community sample of 111 women's retrospective reports of childhood sexual abuse was examined in an effort to understand the circumstances and coping strategies that mediated the immediate and lasting effects of those stressful experiences. Aspects of single or multiple abuse incidents were captured in 11 variables, each reflecting 1 of 3 domains: circumstances of abuse, mediators, and outcomes (the negative effects of abuse). Observed variable simultaneous path analysis models revealed several direct and mediated influences on the outcomes. Long-term negative outcomes of abuse were directly affected by a close relationship to the perpetrator and severity of abuse from the circumstance of abuse domain, and immediate negative responses, self-blame, and nondisclosure regarding the incident from the mediational domain. The importance of examining factors that mediate the negative effects of child sexual abuse is discussed.
Collapse
Affiliation(s)
- G E Wyatt
- Neuropsychiatric Institute, University of California, Los Angeles 90024
| | | |
Collapse
|
35
|
Khansur T, Patel V, Newcomb M, Balducci L. Hepatic intra-arterial adriamycin in metastatic leiomyosarcoma: exploiting the steep dose-response curve. J Surg Oncol 1987; 36:76-9. [PMID: 3626566 DOI: 10.1002/jso.2930360118] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
Abstract
We report a case of extensive leiomyosarcoma of the liver that failed on systemic Adriamycin. Hepatic intra-arterial chemotherapy with Adriamycin has resulted in a lasting clinical remission. This report illustrates the importance of the dose-response curve of drug to tumor in regional chemotherapy as with Adriamycin used in sarcoma, and the need to further explore such therapy in moderately chemosensitive tumors that are surgically unresectable for anatomic reasons.
Collapse
|
36
|
Newcomb M, Gibson K, Periat M, Harris P. Cyclic AMP-dependent protein kinases in the rat myocardial cytosol. Res Commun Chem Pathol Pharmacol 1980; 27:409-12. [PMID: 6245438] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
Abstract
The optimal assay conditions for rat myocardial cytosol protein kinases have been determined. The assay medium contained in 0.25 ml: 40 mM Tris/HCl pH 7.4, 5 mM MgCl2, 600 micrograms histone f1, 10--30 micrograms enzyme protein, 32 microM [gamma-32P]-ATP, with or without additions of 1 microM cAMP. The incubation time at 37 degrees C was 5 minutes. The protein kinase activity in the absence of cAMP decreased with development, while the activity in the presence of cAMP remained unchanged. The protein kinase activity of the left ventricle was higher than that in the right ventricle.
Collapse
|
37
|
|
38
|
Newcomb M, Gibson K, Harris P. Effect of 3,5,3'-triiodothyronine induced cardiac hypertrophy on cytosolic protein kinases. Biochem Biophys Res Commun 1978; 81:596-601. [PMID: 208530 DOI: 10.1016/0006-291x(78)91577-2] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
|
39
|
Caspari PG, Newcomb M, Gibson K, Harris P. Myocardial collagen, the effects of right ventricular hypertrophy and its involution induced by changes in atmospheric pressure. Cardiovasc Res 1978; 12:173-8. [PMID: 148322 DOI: 10.1093/cvr/12.3.173] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 12/13/2022] Open
Abstract
Right ventricular hypertrophy induced by hypobaric conditions was accompanied by an increased collagen mass. Left ventricular collagen was unaffected. Right ventricular mass remained unchanged after involution of right ventricular hypertrophy on return to normobaric conditions. Dietary restriction limited the size and collagen mass of both ventricles.
Collapse
|
40
|
Abstract
Estimates of the collagen concentration in human ventricles have been made from measurements of the hydroxyproline concentration. In the normal heart the concentration of collagen was higher in the right ventricle than in the left ventricle. Age had no effect on the ventricular concentration of collagen. Hypertrophy in the absence of a valvar lesion was not associated with an increased concentration of collagen but, owing to the increased size of the ventricle, there was an increase in the estimated total mass of ventricular collagen. The concentration of collagen in the left ventricle of patients with aortic stenosis was higher than normal. Ventricular hypertrophy seems to be accompanied by an increase in the total mass of collagen whatever the cause. Whether the concentration changes or not depends on the proportion in which the mass of collagen increases relative to the mass of muscle cells.
Collapse
|
41
|
Gibson K, Newcomb M. Characterisation of myocardial protein kinases into cAMP dependent and cAMP independent enzymes using a heat stable inhibitor protein. J Mol Cell Cardiol 1976; 08:733-9. [PMID: 184292 DOI: 10.1016/0022-2828(76)90015-8] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [What about the content of this article? (0)] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
|
42
|
|
43
|
Cram DJ, Helgeson RC, Sousa LR, Timko JM, Newcomb M, Moreau P, de Jong F, Gokel GW, Hoffman DH, Domeier LA, Peacock SC, Madan K, Kaplan L. Chiral recognition in complexation of guests by designed host molecules. PURE APPL CHEM 1975. [DOI: 10.1351/pac197543030327] [Citation(s) in RCA: 92] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
|
44
|
|
45
|
|