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Dong H, Wang Y, Di Y, Qiu Y, Ji Z, Zhou T, Shen S, Du N, Zhang T, Dong X, Guo Z, Piao F, Li Y. Plant growth-promoting rhizobacteria Pseudomonas aeruginosa HG28-5 improves salt tolerance by regulating Na +/K + homeostasis and ABA signaling pathway in tomato. Microbiol Res 2024; 283:127707. [PMID: 38582011 DOI: 10.1016/j.micres.2024.127707] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2023] [Revised: 03/19/2024] [Accepted: 03/27/2024] [Indexed: 04/08/2024]
Abstract
Salinity stress badly restricts the growth, yield and quality of vegetable crops. Plant growth-promoting rhizobacteria (PGPR) is a friendly and effective mean to enhance plant growth and salt tolerance. However, information on the regulatory mechanism of PGPR on vegetable crops in response to salt stress is still incomplete. Here, we screened a novel salt-tolerant PGPR strain Pseudomonas aeruginosa HG28-5 by evaluating the tomatoes growth performance, chlorophyll fluorescence index, and relative electrolyte leakage (REL) under normal and salinity conditions. Results showed that HG28-5 colonization improved seedling growth parameters by increasing the plant height (23.7%), stem diameter (14.6%), fresh and dry weight in the shoot (60.3%, 91.1%) and root (70.1%, 92.5%), compared to salt-stressed plants without colonization. Likewise, HG28-5 increased levels of maximum photochemical efficiency of PSII (Fv/Fm) (99.3%), the antioxidant enzyme activities as superoxide dismutase (SOD, 85.5%), peroxidase (POD, 35.2%), catalase (CAT, 20.6%), and reduced the REL (48.2%), MDA content (41.3%) and ROS accumulation in leaves of WT tomatoes under salt stress in comparison with the plants treated with NaCl alone. Importantly, Na+ content of HG28-5 colonized salt-stressed WT plants were decreased by15.5% in the leaves and 26.6% in the roots in the corresponding non-colonized salt-stressed plants, which may be attributed to the higher K+ concentration and SOS1, SOS2, HKT1;2, NHX1 transcript levels in leaves of colonized plants under saline condition. Interestingly, increased abscisic acid (ABA) content and upregulation of ABA pathway genes (ABA synthesis-related genes NCED1, NCED2, NCED4, NECD6 and signal genes ABF4, ABI5, and AREB) were observed in HG28-5 inoculated salt-stressed WT plants. ABA-deficient mutant (not) with NCED1 deficiency abolishes the effect of HG28-5 on alleviating salt stress in tomato, as exhibited by the substantial rise of REL and ROS accumulation and sharp drop of Fv/Fm in the leaves of not mutant plants. Notably, HG28-5 colonization enhances tomatoes fruit yield by 54.9% and 52.4% under normal and saline water irrigation, respectively. Overall, our study shows that HG28-5 colonization can significantly enhance salt tolerance and improved fruit yield by a variety of plant protection mechanism, including reducing oxidative stress, regulating plant growth, Na+/K+ homeostasis and ABA signaling pathways in tomato. The findings not only deepen our understanding of PGPR regulation plant growth and salt tolerance but also allow us to apply HG28-5 as a microbial fertilizer for agricultural production in high-salinity areas.
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Affiliation(s)
- Han Dong
- College of Landscape Architecture and Art, Henan Agricultural University, Zhengzhou 450002, PR China; College of Horticulture, Henan Agricultural University, Zhengzhou 450002, PR China
| | - Yuanyuan Wang
- College of Horticulture, Henan Agricultural University, Zhengzhou 450002, PR China
| | - Yancui Di
- College of Horticulture, Henan Agricultural University, Zhengzhou 450002, PR China
| | - Yingying Qiu
- College of Horticulture, Henan Agricultural University, Zhengzhou 450002, PR China
| | - Zelin Ji
- College of Horticulture, Henan Agricultural University, Zhengzhou 450002, PR China
| | - Tengfei Zhou
- College of Horticulture, Henan Agricultural University, Zhengzhou 450002, PR China
| | - Shunshan Shen
- College of Horticulture, Henan Agricultural University, Zhengzhou 450002, PR China
| | - Nanshan Du
- College of Horticulture, Henan Agricultural University, Zhengzhou 450002, PR China
| | - Tao Zhang
- College of Horticulture, Henan Agricultural University, Zhengzhou 450002, PR China
| | - Xiaoxing Dong
- College of Horticulture, Henan Agricultural University, Zhengzhou 450002, PR China
| | - Zhixin Guo
- College of Horticulture, Henan Agricultural University, Zhengzhou 450002, PR China; International Joint Laboratory of Henan Horticultural Crop Biology, Henan Provincial Facility Horticulture Engineering Technology Research Center, Zhengzhou 450002, PR China.
| | - Fengzhi Piao
- College of Horticulture, Henan Agricultural University, Zhengzhou 450002, PR China; International Joint Laboratory of Henan Horticultural Crop Biology, Henan Provincial Facility Horticulture Engineering Technology Research Center, Zhengzhou 450002, PR China.
| | - Yonghua Li
- College of Landscape Architecture and Art, Henan Agricultural University, Zhengzhou 450002, PR China.
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Guo Z, Qin Y, Lv J, Wang X, Ye T, Dong X, Du N, Zhang T, Piao F, Dong H, Shen S. High red/far-red ratio promotes root colonization of Serratia plymuthica A21-4 in tomato by root exudates-stimulated chemotaxis and biofilm formation. Plant Physiol Biochem 2024; 206:108245. [PMID: 38064903 DOI: 10.1016/j.plaphy.2023.108245] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/29/2023] [Revised: 11/08/2023] [Accepted: 11/27/2023] [Indexed: 02/15/2024]
Abstract
Effective colonization on plant roots is a prerequisite for plant growth promoting rhizobacterias (PGPR) to exert beneficial activities. Light is essential for plant growth, development and stress response. However, how light modulates root colonization of PGPR remains unclear. Here, we found that high red/far red (R/FR) light promoted and low R/FR light inhibited the colonization and growth enhancement of Serratia plymuthica A21-4 (S. plymuthica A21-4) on tomato, respectively. Non-targeted metabolomic analysis of root exudates collected from different R/FR ratio treated tomato seedlings with or without S. plymuthica A21-4 inoculation by UPLC-MS/MS showed that 64 primary metabolites in high R/FR light-grown plants significantly increased compared with those determined for low R/FR light-grown plants. Among them, 7 amino acids, 1 organic acid and 1 sugar obviously induced the chemotaxis and biofilm formation of S. plymuthica A21-4 compared to the control. Furthermore, exogenous addition of five artificial root exudate compontents (leucine, methionine, glutamine, 6-aminocaproic acid and melezitose) regained and further increased the colonization ability and growth promoting ability of S. plymuthica A21-4 on tomato under low R/FR light and high R/FR light, respectively, indicating their involvement in high R/FR light-regulated the interaction of tomato root and S. plymuthica A21-4. Taken together, our results, for the first time, clearly demonstrate that high R/FR light-induced root exudates play a key role in chemotaxis, biofilm formation and root colonization of S. plymuthica A21-4. This study can help promote the combined application of light supplementation and PGPR to facilitate crop growth and health in green agricultural production.
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Affiliation(s)
- Zhixin Guo
- College of Horticulture, Henan Agricultural University, Zhengzhou, 450046, PR China; International Joint Laboratory of Henan Horticultural Crop Biology, Henan Provincial Facility Horticulture Engineering Technology Research Center, Zhengzhou, 450046, PR China
| | - Yanping Qin
- College of Horticulture, Henan Agricultural University, Zhengzhou, 450046, PR China
| | - Jingli Lv
- College of Horticulture, Henan Agricultural University, Zhengzhou, 450046, PR China
| | - Xiaojie Wang
- College of Horticulture, Henan Agricultural University, Zhengzhou, 450046, PR China
| | - Ting Ye
- College of Horticulture, Henan Agricultural University, Zhengzhou, 450046, PR China
| | - Xiaoxing Dong
- College of Horticulture, Henan Agricultural University, Zhengzhou, 450046, PR China
| | - Nanshan Du
- College of Horticulture, Henan Agricultural University, Zhengzhou, 450046, PR China
| | - Tao Zhang
- College of Horticulture, Henan Agricultural University, Zhengzhou, 450046, PR China
| | - Fengzhi Piao
- College of Horticulture, Henan Agricultural University, Zhengzhou, 450046, PR China
| | - Han Dong
- College of Horticulture, Henan Agricultural University, Zhengzhou, 450046, PR China; International Joint Laboratory of Henan Horticultural Crop Biology, Henan Provincial Facility Horticulture Engineering Technology Research Center, Zhengzhou, 450046, PR China.
| | - Shunshan Shen
- College of Plant Protection, Henan Agricultural University, Zhengzhou, 450046, PR China.
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Nitta T, Braine T, Du N, Guzzetti M, Hanretty C, Leum G, Rosenberg LJ, Rybka G, Sinnis J, Clarke J, Siddiqi I, Awida MH, Chou AS, Hollister M, Knirck S, Sonnenschein A, Wester W, Gleason JR, Hipp AT, Sikivie P, Sullivan NS, Tanner DB, Khatiwada R, Carosi G, Robertson N, Duffy LD, Boutan C, Lentz E, Oblath NS, Taubman MS, Yang J, Daw EJ, Perry MG, Bartram C, Buckley JH, Gaikwad C, Hoffman J, Murch KW, Goryachev M, Hartman E, McAllister BT, Quiskamp A, Thomson C, Tobar ME, Dror JA, Murayama H, Rodd NL. Search for a Dark-Matter-Induced Cosmic Axion Background with ADMX. Phys Rev Lett 2023; 131:101002. [PMID: 37739367 DOI: 10.1103/physrevlett.131.101002] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/19/2023] [Revised: 06/05/2023] [Accepted: 08/16/2023] [Indexed: 09/24/2023]
Abstract
We report the first result of a direct search for a cosmic axion background (CaB)-a relativistic background of axions that is not dark matter-performed with the axion haloscope, the Axion Dark Matter eXperiment (ADMX). Conventional haloscope analyses search for a signal with a narrow bandwidth, as predicted for dark matter, whereas the CaB will be broad. We introduce a novel analysis strategy, which searches for a CaB induced daily modulation in the power measured by the haloscope. Using this, we repurpose data collected to search for dark matter to set a limit on the axion photon coupling of a CaB originating from dark matter cascade decay via a mediator in the 800-995 MHz frequency range. We find that the present sensitivity is limited by fluctuations in the cavity readout as the instrument scans across dark matter masses. Nevertheless, we suggest that these challenges can be surmounted using superconducting qubits as single photon counters, and allow ADMX to operate as a telescope searching for axions emerging from the decay of dark matter. The daily modulation analysis technique we introduce can be deployed for various broadband rf signals, such as other forms of a CaB or even high-frequency gravitational waves.
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Affiliation(s)
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | - J A Dror
- Santa Cruz Institute for Particle Physics and Department of Physics, University of California, 1156 High St, Santa Cruz, California 95060, USA
| | - H Murayama
- University of California, Berkeley, California 94720, USA
- Lawrence Berkeley National Laboratory, Berkeley, California 94720, USA
- Kavli Institute for the Physics and Mathematics of the Universe (WPI), The University of Tokyo, Kashiwa 277-8583, Japan
| | - N L Rodd
- Theoretical Physics Department, CERN, 1 Esplanade des Particules, CH-1211 Geneva 23, Switzerland
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Zhang JJ, Niu Y, Ma C, Zhao T, Wang H, Yan Z, Zhou L, Liu X, Piao F, Du N. Accumulation and metabolism of pyroxasulfone in tomato seedlings. Ecotoxicol Environ Saf 2023; 254:114765. [PMID: 36907092 DOI: 10.1016/j.ecoenv.2023.114765] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/01/2022] [Revised: 08/01/2022] [Accepted: 03/08/2023] [Indexed: 06/18/2023]
Abstract
Pyroxasulfone (PYS) is an isoxazole herbicide favored for its high activity. However, the metabolic mechanism of PYS in tomato plants and the response mechanism of tomato to PYS are still lacking. In this study, it was found that tomato seedlings had a strong ability to absorb and translocate PYS from roots to shoots. The highest accumulation of PYS was in the apex tissue of the tomato shoots. Using UPLC-MS/MS, five metabolites of PYS were detected and identified in tomato plants, and their relative contents in different parts of tomato plants varied greatly. The serine conjugate, DMIT [5, 5-dimethyl-4, 5-dihydroisoxazole-3-thiol (DMIT)] &Ser, was the most abundant metabolites of PYS in tomato plants. In tomato plants, the conjugation of thiol-containing metabolic intermediates of PYS to serine may mimic the cystathionine β-synthase-catalyzed condensation of serine and homocysteine (in the pathway sly00260 sourced from KEGG database). This study ground breakingly proposed that serine may play an important role in plant metabolism of PYS and fluensulfone (whose molecular structure is similar to PYS). PYS and atrazine (whose toxicity profile is similar to PYS but not conjugate with serine) produced different regulatory outcomes for endogenous compounds in the pathway sly00260. Differential metabolites in tomato leaves exposed to PYS compared with the control, including amino acids, phosphates, and flavonoids, may play important roles in tomato response to PYS stress. This study provides inspiration for the biotransformation of sulfonyl-containing pesticides, antibiotics and other compounds in plants.
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Affiliation(s)
- Jing Jing Zhang
- Henan Key Laboratory for Creation and Application of New Pesticides, College of Plant Protection, Henan Agricultural University, Zhengzhou 450002, China
| | - Yujia Niu
- Henan Key Laboratory for Creation and Application of New Pesticides, College of Plant Protection, Henan Agricultural University, Zhengzhou 450002, China
| | - Cong Ma
- Henan Key Laboratory for Creation and Application of New Pesticides, College of Plant Protection, Henan Agricultural University, Zhengzhou 450002, China; PLA Army Service Academy Training Base, Chongqing, 400041, China
| | - Te Zhao
- Henan Key Laboratory for Creation and Application of New Pesticides, College of Plant Protection, Henan Agricultural University, Zhengzhou 450002, China
| | - Hongwei Wang
- Henan Key Laboratory for Creation and Application of New Pesticides, College of Plant Protection, Henan Agricultural University, Zhengzhou 450002, China
| | - Zishuo Yan
- Henan Key Laboratory for Creation and Application of New Pesticides, College of Plant Protection, Henan Agricultural University, Zhengzhou 450002, China
| | - Lin Zhou
- Henan Key Laboratory for Creation and Application of New Pesticides, College of Plant Protection, Henan Agricultural University, Zhengzhou 450002, China
| | - Xiangyang Liu
- Henan Key Laboratory for Creation and Application of New Pesticides, College of Plant Protection, Henan Agricultural University, Zhengzhou 450002, China
| | - Fengzhi Piao
- College of Horticulture, Henan Agricultural University, Zhengzhou 450002, China
| | - Nanshan Du
- College of Horticulture, Henan Agricultural University, Zhengzhou 450002, China.
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5
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Hu JY, Du N, Bao YH, Zhang WF. [Paradoxical worsening after treatment of choroidal tuberculoma: a case report]. Zhonghua Yan Ke Za Zhi 2023; 59:213-216. [PMID: 36860109 DOI: 10.3760/cma.j.cn112142-20220810-00392] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Subscribe] [Scholar Register] [Indexed: 03/03/2023]
Abstract
A young woman who complained of visual acuity decreased in the right eye for 12 days visited the Department of Ophthalmology. A solitary and occupancy lesion was seen in the posterior pole of the fundus of the patient's right eye, accompanied by intracranial and pulmonary tuberculosis. The diagnosis was choroidal tuberculoma, intracranial tuberculoma, and invasive pulmonary tuberculosis. After anti-tuberculosis treatment, the lesions of lung were better, but the lesions in the right eye and brain were paradoxical worsening. Finally, the lesion was calcification and absorption after combined glucocorticoid therapy.
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Affiliation(s)
- J Y Hu
- Lanzhou University Second Hospital, Lanzhou 730030, China
| | - N Du
- Lanzhou University Second Hospital, Lanzhou 730030, China
| | - Y H Bao
- Lanzhou University Second Hospital, Lanzhou 730030, China
| | - W F Zhang
- Lanzhou University Second Hospital, Lanzhou 730030, China
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Braine T, Rybka G, Baker AA, Brodsky J, Carosi G, Du N, Woollett N, Knirck S, Jones M. Multi-mode analysis of surface losses in a superconducting microwave resonator in high magnetic fields. Rev Sci Instrum 2023; 94:033102. [PMID: 37012755 DOI: 10.1063/5.0122296] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/23/2022] [Accepted: 02/25/2023] [Indexed: 06/19/2023]
Abstract
This paper reports on a surface impedance measurement of a bulk metal niobium-titanium superconducting radio frequency (SRF) cavity in a magnetic field (up to 10 T). A novel method is employed to decompose the surface resistance contributions of the cylindrical cavity end caps and walls using measurements from multiple TM cavity modes. The results confirm that quality factor degradation of a NbTi SRF cavity in a high magnetic field is primarily from surfaces perpendicular to the field (the cavity end caps), while parallel surface resistances (the walls) remain relatively constant. This result is encouraging for applications needing high Q cavities in strong magnetic fields, such as the Axion Dark Matter eXperiment because it opens the possibility of hybrid SRF cavity construction to replace conventional copper cavities.
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Affiliation(s)
- T Braine
- University of Washington, Seattle, Washington 98195, USA
| | - G Rybka
- University of Washington, Seattle, Washington 98195, USA
| | - A A Baker
- Lawrence Livermore National Laboratory, Livermore, California 94550, USA
| | - J Brodsky
- Lawrence Livermore National Laboratory, Livermore, California 94550, USA
| | - G Carosi
- Lawrence Livermore National Laboratory, Livermore, California 94550, USA
| | - N Du
- Lawrence Livermore National Laboratory, Livermore, California 94550, USA
| | - N Woollett
- Lawrence Livermore National Laboratory, Livermore, California 94550, USA
| | - S Knirck
- Fermi National Accelerator Laboratory, Batavia, Illinois 60510, USA
| | - M Jones
- Pacific Northwest National Laboratory, Richland, Washington 99354, USA
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Guo Z, Qin Y, Lv J, Wang X, Dong H, Dong X, Zhang T, Du N, Piao F. Luffa rootstock enhances salt tolerance and improves yield and quality of grafted cucumber plants by reducing sodium transport to the shoot. Environ Pollut 2023; 316:120521. [PMID: 36309299 DOI: 10.1016/j.envpol.2022.120521] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/19/2022] [Revised: 10/11/2022] [Accepted: 10/20/2022] [Indexed: 06/16/2023]
Abstract
Soil salinity severely limits crop yield and quality. Grafting onto tolerant rootstocks is known as an effective means to alleviate salt stress. The present study was planned to find out the potential roles, mechanisms and applications of luffa rootstock to improve salt tolerance of grafted cucumber plants. Here, we screened a highly salt-tolerant luffa rootstock by evaluating the growth, photosynthetic performance, antioxidant defense and the accumulation of Na+ and K+ under salt stress. Reciprocal grafting between cucumber and luffa showed that luffa rootstock significantly improved the salt tolerance of cucumber plants, as evidenced by higher fresh weight, photochemical efficiency (Fv/Fm), and lower relative electrical conductivity (REC), which was closely associated with the decreased accumulation of Na+ and increased the accumulation of K+ in shoots of luffa grafted cucumber seedlings, leading to a lower Na+:K+ ratio in shoot when compared with self-grafted cucumber. Furthermore, grafting with intermediate stock of luffa also sufficiently alleviated cucumber salt stress by reducing Na+ accumulation in shoot and the whole plant but increasing Na+ accumulation in interstock and root under salt stress, fully proving the salt tolerance depending on the capacity of luffa interstock to limit the transport of Na+ from the root to the shoot. More importantly, luffa rootstock improved the growth, yield and quality of grafted cucumber plants grown in pots in solar greenhouse as revealed by increased net photosynthetic rate, plant height, leaf number, yield, Vitamin C and soluble sugar but decreased titratable acid under both salinity and normal conditions. Together, these results, for the first time, clearly demonstrated that luffa,a new highly salt-tolerant rootstock, enhances salt tolerance and improves yield and quality of grafted cucumber plants by reducing sodium transport to the shoot.
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Affiliation(s)
- Zhixin Guo
- College of Horticulture, Henan Agricultural University, Zhengzhou, 450002, PR China
| | - Yanping Qin
- College of Horticulture, Henan Agricultural University, Zhengzhou, 450002, PR China
| | - Jingli Lv
- College of Horticulture, Henan Agricultural University, Zhengzhou, 450002, PR China
| | - Xiaojie Wang
- College of Horticulture, Henan Agricultural University, Zhengzhou, 450002, PR China
| | - Han Dong
- College of Horticulture, Henan Agricultural University, Zhengzhou, 450002, PR China
| | - Xiaoxing Dong
- College of Horticulture, Henan Agricultural University, Zhengzhou, 450002, PR China
| | - Tao Zhang
- College of Horticulture, Henan Agricultural University, Zhengzhou, 450002, PR China
| | - Nanshan Du
- College of Horticulture, Henan Agricultural University, Zhengzhou, 450002, PR China
| | - Fengzhi Piao
- College of Horticulture, Henan Agricultural University, Zhengzhou, 450002, PR China.
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Du N, Xue L, Xue D, Dong X, Yang Q, Shah Jahan M, Guo H, Fu R, Wang Y, Piao F. The transcription factor SlNAP1 increases salt tolerance by modulating ion homeostasis and ROS metabolism in Solanum lycopersicum. Gene X 2023; 849:146906. [DOI: 10.1016/j.gene.2022.146906] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/11/2022] [Revised: 09/03/2022] [Accepted: 09/19/2022] [Indexed: 11/25/2022] Open
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Du N, Guo H, Fu R, Dong X, Xue D, Piao F. Comparative Transcriptome Analysis and Genetic Methods Revealed the Biocontrol Mechanism of Paenibacilluspolymyxa NSY50 against Tomato Fusarium Wilt. Int J Mol Sci 2022; 23:ijms231810907. [PMID: 36142825 PMCID: PMC9501285 DOI: 10.3390/ijms231810907] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/18/2022] [Revised: 09/14/2022] [Accepted: 09/15/2022] [Indexed: 11/16/2022] Open
Abstract
Fusarium wilt caused by Fusarium oxysporum f. sp. lycopersici (Fol) is a common disease that affects tomatoes, which can cause the whole plant to wilt and seriously reduce the production of tomatoes in greenhouses. In this study, the morphological indexes, photosynthetic performance and incidence rate of NSY50 under Fol infection were evaluated. It was found that NSY50 could improve the growth of tomato seedlings and significantly reduce the incidence rate of Fusarium wilt. However, the molecular mechanism of NSY50 that induces resistance to Fusarium wilt is still unclear. We used transcriptomic methods to analyze NSY50-induced resistance to Fol in tomatoes. The results showed that plant defense related genes, such as PR and PAL, were highly expressed in tomato seedlings pretreated with NSY50. At the same time, photosynthetic efficiency, sucrose metabolism, alkaloid biosynthesis and terpene biosynthesis were significantly improved, which played a positive role in reducing the damage caused by Fol infection and enhancing the disease tolerance of seedlings. Through transgenic validation, we identified an important tomato NAC transcription factor, SlNAP1, which was preliminarily confirmed to be effective in relieving the detrimental symptoms induced by Fol. Our findings reveal that P. polymyxa NSY50 is an effective plant-growth-promoting rhizosphere bacterium and also a biocontrol agent of soil-borne diseases, which can significantly improve the resistance of tomato to Fusarium wilt.
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Affiliation(s)
- Nanshan Du
- College of Horticulture, Henan Agricultural University, Zhengzhou 450002, China
| | - Hui Guo
- College of Horticulture, Henan Agricultural University, Zhengzhou 450002, China
| | - Ruike Fu
- College of Horticulture, Henan Agricultural University, Zhengzhou 450002, China
| | - Xiaoxing Dong
- College of Horticulture, Henan Agricultural University, Zhengzhou 450002, China
| | - Dongqi Xue
- College of Horticulture, Henan Agricultural University, Zhengzhou 450002, China
- Henan Key Laboratory of Fruit and Cucurbit Biology, Henan Agricultural University, Zhengzhou 450002, China
- Correspondence: (D.X.); (F.P.); Tel.: +86-133-2382-6629 (D.X.)
| | - Fengzhi Piao
- College of Horticulture, Henan Agricultural University, Zhengzhou 450002, China
- Correspondence: (D.X.); (F.P.); Tel.: +86-133-2382-6629 (D.X.)
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10
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Guo Z, Lv J, Zhang H, Hu C, Qin Y, Dong H, Zhang T, Dong X, Du N, Piao F. Red and blue light function antagonistically to regulate cadmium tolerance by modulating the photosynthesis,antioxidant defense system and Cd uptake in cucumber(Cucumis sativus L.). J Hazard Mater 2022; 429:128412. [PMID: 35236029 DOI: 10.1016/j.jhazmat.2022.128412] [Citation(s) in RCA: 19] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/18/2021] [Revised: 01/27/2022] [Accepted: 01/30/2022] [Indexed: 05/27/2023]
Abstract
Cadmium (Cd) is highly toxic to both plants and humans.Light plays crucial roles in plant growth, development and stress responses, but how light functions in plant Cd response remain unclear.Here,we found that Cd treatment significantly induced the expression of PHYB but not PHYA and CRY1 in leaves and roots of cucumber. Correspondingly,compared with white light (W) during Cd stress,red light(R) increased Cd sensitivity,whereas blue light (B) enhanced Cd tolerance as evidenced by decreased Cd-induced chlorosis, growth inhibition, photosynthesis inhibition and chloroplast ultrastructure damage.Furthermore,B markedly increased the transcripts and activities of the antioxidant enzymes including ascorbate peroxidase (APX),catalase (CAT),superoxide dismutase (SOD) and glutathione reductase (GR),as well as glutathione (GSH) content and GSH1 expression, resulting in hydrogen peroxide (H2O2) and superoxide (O2.-) reduction,but R treatment showed the opposite trend. Moreover, R and B markedly up-regulated and down-regulated the expression levels of Cd uptake and transport genes including IRT1, NRAMP1 and HMA3, leading to more and less Cd accumulation than the W-treated plants in both shoots and roots, respectively under Cd stress. Collectively, our data clearly demonstrate that R and B function antagonistically to regulate Cd tolerance in cucumber via modulating the photosynthesis, antioxidant defense system and Cd uptake, providing a novel light quality control strategy to enhance crop Cd tolerance and food safety.
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Affiliation(s)
- Zhixin Guo
- College of Horticulture, Henan Agricultural University, Zhengzhou 450002, P.R. China
| | - Jingli Lv
- College of Horticulture, Henan Agricultural University, Zhengzhou 450002, P.R. China
| | - Huimei Zhang
- College of Horticulture, Henan Agricultural University, Zhengzhou 450002, P.R. China
| | - Chunyan Hu
- College of Horticulture, Henan Agricultural University, Zhengzhou 450002, P.R. China
| | - Yanping Qin
- College of Horticulture, Henan Agricultural University, Zhengzhou 450002, P.R. China
| | - Han Dong
- College of Horticulture, Henan Agricultural University, Zhengzhou 450002, P.R. China
| | - Tao Zhang
- College of Horticulture, Henan Agricultural University, Zhengzhou 450002, P.R. China
| | - Xiaoxing Dong
- College of Horticulture, Henan Agricultural University, Zhengzhou 450002, P.R. China
| | - Nanshan Du
- College of Horticulture, Henan Agricultural University, Zhengzhou 450002, P.R. China
| | - Fengzhi Piao
- College of Horticulture, Henan Agricultural University, Zhengzhou 450002, P.R. China.
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11
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Yin XL, Ma YY, Liu YL, Wang LX, Du N, Yang L. Changes of brain-derived neurotrophic factors in rats with generalized anxiety disorder before and after treatment. Eur Rev Med Pharmacol Sci 2022; 26:1500-1507. [PMID: 35302194 DOI: 10.26355/eurrev_202203_28214] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
Abstract
OBJECTIVE The aim of the current study was to investigate the association between brain-derived neurotrophic factor (BDNF) and generalized anxiety disorder (GAD). MATERIALS AND METHODS A total of sixty male adult Wistar rats with similar body weight and age were randomly divided into 3 groups the blank control group (CON, n=20), the saline control group (SAL, n=20), and the combined medication group (Deanxit +fluoxetine, DF, n=20), then rats in group SAL and group DF were prepared for model of anxiety disorder for 14 days. The body weight, center-retention time (CRT) and square-crossover number per unit time (SCN) were compared during modeling to define the anxiety of rats on day 1, day 7 and day 14; the BDNF mRNA in brain were detected by RT-PCR and the protein of BDNF in brain were detected by immunohistochemistry before and after intervention. The body weight, CRT and SCN in group SAL and DF after modeling were decreased with time compared with CON (p<0.05). The rats were taken euthanasia after 14 days, the BDNF mRNA showed significant decrease in SAL group (0.58±0.07) compared with group CON (2.87±0.23), while in DF group (1.76±0.21), the BDNF mRNA were higher than SAL group but lower than CON (p<0.05); the BDNF positive cells in group CON was highest (90%), then was group DF (75%) and group SAL was the lowest (35%). RESULTS The changes in the indexes of the rats among different groups before and after modeling showed that after modeling, the body weights of the rats in group SAL and group DF were lower than group CON, the CRT decreased, and the SCN increased. The differences were statistically significant (p < 0.05), indicating that the combined medication (Qilixin + fluoxetine) can improve anxiety symptoms (body weight, CRT, and SCN). CONCLUSIONS Anti-anxiety drugs (Deanxit+fluoxetine) can improve anxiety symptoms of rats and increase the expressions of BDNF mRNA and protein in rat brain cells. Anxiolytic drugs (Deanxit+fluoxetine) may achieve the treatment of anxiety disorders through improving the 5-HT nervous system and the expressions of BDNF mRNA and protein. BDNF can be used as a biochemical indicator for the diagnosis and efficacy evaluation of GAD.
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Affiliation(s)
- X-L Yin
- Department of Neurology, Clinical Medical College of Dali University, Dali, China.
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Du N, Wang LX, Liu YL, Yin XL, Zhao JS, Yang L. Effect of tirofiban in treating patients with progressive ischemic stroke. Eur Rev Med Pharmacol Sci 2022; 26:2098-2105. [PMID: 35363359 DOI: 10.26355/eurrev_202203_28357] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
Abstract
OBJECTIVE Our aim is to investigate the efficacy and safety of tirofiban in the treatment of patients experiencing progressive ischemic stroke (PIS). PATIENTS AND METHODS A retrospective analysis was performed on the clinical data of 150 patients with ischemic stroke admitted to our hospital from May 2018 to December 2019. All the patients were divided into two groups according to different treatment methods. In Control group, conventional comprehensive treatment and antiplatelet therapy with aspirin + clopidogrel were conducted, while tirofiban was administered in Tirofiban group in addition to the treatments in Control group. Neurological deficits were scored by means of the National Institutes of Health Stroke Scale (NIHSS) at the time of progression and 30 d after treatment, and the modified Rankin Scale (mRS) and Activity of Daily Living (ADL) scale were employed to assess prognosis at 90 d after treatment. Thereafter, the platelet aggregation rate, platelet adhesion rate, plateletcrit (PCT), platelet distribution width (PDW), and platelet inhibition rate were measured before and after treatment. Finally, the patients were followed up, and the occurrence of hemorrhage events during treatment and within 90 d after discharge was recorded. RESULTS After treatment, all the patients had significantly lower NIHSS and mRS scores and a dramatically higher Barthel index (BI) than those before treatment (p<0.001). At 90 d after treatment, Tirofiban group exhibited significantly higher BI (p<0.001) and lower mRS score than Control group (p=0.011). In addition, at 14 d after treatment, the clinical efficacy was assessed for all the patients. It was found that the overall response rate in Tirofiban group was substantially higher than that in Control group [82.7% (62/75) vs. 64.0% (48/75), p=0.009]. At 7 d after treatment, the PCT and adenosine diphosphate (ADP) platelet inhibition rate in Tirofiban group were markedly higher than those in Control group (p=0.006, p<0.001), and Tirofiban group had remarkably lower measured values of platelet aggregation rate, platelet adhesion rate and PDW than Control group (p=0.007, p=0.021, p<0.001). After treatment, the levels of serum IL-6 and hs-CRP declined notably in the two groups of patients, and the differences in their levels at 2 and 14 d after treatment between the two groups were statistically significant (p<0.05). During treatment and within 90 d after discharge, both groups of patients had no cerebral hemorrhage, gastrointestinal hemorrhage, and severe hemorrhage adverse events requiring blood transfusion, but they experienced subcutaneous ecchymosis, epistaxis, gingival hemorrhage, and hemorrhage around the infarct, which were improved after symptomatic treatment. Moreover, the occurrence rate of hemorrhage in Tirofiban group was higher than that in Control group, showing no statistically significant difference (p>0.05). CONCLUSIONS Tirofiban combined with conventional basic treatment can greatly improve neurological deficits and disease outcomes, alleviate platelet adhesion, and reduce platelet activation without increasing the risk of hemorrhage in PIS patients.
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Affiliation(s)
- N Du
- Department of Neurology, Clinical Medical College of Dali University, Dali, China.
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13
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Bartram C, Braine T, Burns E, Cervantes R, Crisosto N, Du N, Korandla H, Leum G, Mohapatra P, Nitta T, Rosenberg LJ, Rybka G, Yang J, Clarke J, Siddiqi I, Agrawal A, Dixit AV, Awida MH, Chou AS, Hollister M, Knirck S, Sonnenschein A, Wester W, Gleason JR, Hipp AT, Jois S, Sikivie P, Sullivan NS, Tanner DB, Lentz E, Khatiwada R, Carosi G, Robertson N, Woollett N, Duffy LD, Boutan C, Jones M, LaRoque BH, Oblath NS, Taubman MS, Daw EJ, Perry MG, Buckley JH, Gaikwad C, Hoffman J, Murch KW, Goryachev M, McAllister BT, Quiskamp A, Thomson C, Tobar ME. Search for Invisible Axion Dark Matter in the 3.3-4.2 μeV Mass Range. Phys Rev Lett 2021; 127:261803. [PMID: 35029490 DOI: 10.1103/physrevlett.127.261803] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/11/2021] [Accepted: 11/16/2021] [Indexed: 06/14/2023]
Abstract
We report the results from a haloscope search for axion dark matter in the 3.3-4.2 μeV mass range. This search excludes the axion-photon coupling predicted by one of the benchmark models of "invisible" axion dark matter, the Kim-Shifman-Vainshtein-Zakharov model. This sensitivity is achieved using a large-volume cavity, a superconducting magnet, an ultra low noise Josephson parametric amplifier, and sub-Kelvin temperatures. The validity of our detection procedure is ensured by injecting and detecting blind synthetic axion signals.
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Affiliation(s)
- C Bartram
- University of Washington, Seattle, Washington 98195, USA
| | - T Braine
- University of Washington, Seattle, Washington 98195, USA
| | - E Burns
- University of Washington, Seattle, Washington 98195, USA
| | - R Cervantes
- University of Washington, Seattle, Washington 98195, USA
| | - N Crisosto
- University of Washington, Seattle, Washington 98195, USA
| | - N Du
- University of Washington, Seattle, Washington 98195, USA
| | - H Korandla
- University of Washington, Seattle, Washington 98195, USA
| | - G Leum
- University of Washington, Seattle, Washington 98195, USA
| | - P Mohapatra
- University of Washington, Seattle, Washington 98195, USA
| | - T Nitta
- University of Washington, Seattle, Washington 98195, USA
| | - L J Rosenberg
- University of Washington, Seattle, Washington 98195, USA
| | - G Rybka
- University of Washington, Seattle, Washington 98195, USA
| | - J Yang
- University of Washington, Seattle, Washington 98195, USA
| | - John Clarke
- University of California, Berkeley, California 94720, USA
| | - I Siddiqi
- University of California, Berkeley, California 94720, USA
| | - A Agrawal
- University of Chicago, Illinois 60637, USA
| | - A V Dixit
- University of Chicago, Illinois 60637, USA
| | - M H Awida
- Fermi National Accelerator Laboratory, Batavia, Illinois 60510, USA
| | - A S Chou
- Fermi National Accelerator Laboratory, Batavia, Illinois 60510, USA
| | - M Hollister
- Fermi National Accelerator Laboratory, Batavia, Illinois 60510, USA
| | - S Knirck
- Fermi National Accelerator Laboratory, Batavia, Illinois 60510, USA
| | - A Sonnenschein
- Fermi National Accelerator Laboratory, Batavia, Illinois 60510, USA
| | - W Wester
- Fermi National Accelerator Laboratory, Batavia, Illinois 60510, USA
| | - J R Gleason
- University of Florida, Gainesville, Florida 32611, USA
| | - A T Hipp
- University of Florida, Gainesville, Florida 32611, USA
| | - S Jois
- University of Florida, Gainesville, Florida 32611, USA
| | - P Sikivie
- University of Florida, Gainesville, Florida 32611, USA
| | - N S Sullivan
- University of Florida, Gainesville, Florida 32611, USA
| | - D B Tanner
- University of Florida, Gainesville, Florida 32611, USA
| | - E Lentz
- University of Göttingen, Göttingen 37077, Germany
| | - R Khatiwada
- Fermi National Accelerator Laboratory, Batavia, Illinois 60510, USA
- Illinois Institute of Technology, Chicago, Illinois 60616, USA
| | - G Carosi
- Lawrence Livermore National Laboratory, Livermore, California 94550, USA
| | - N Robertson
- Lawrence Livermore National Laboratory, Livermore, California 94550, USA
| | - N Woollett
- Lawrence Livermore National Laboratory, Livermore, California 94550, USA
| | - L D Duffy
- Los Alamos National Laboratory, Los Alamos, New Mexico 87545, USA
| | - C Boutan
- Pacific Northwest National Laboratory, Richland, Washington 99354, USA
| | - M Jones
- Pacific Northwest National Laboratory, Richland, Washington 99354, USA
| | - B H LaRoque
- Pacific Northwest National Laboratory, Richland, Washington 99354, USA
| | - N S Oblath
- Pacific Northwest National Laboratory, Richland, Washington 99354, USA
| | - M S Taubman
- Pacific Northwest National Laboratory, Richland, Washington 99354, USA
| | - E J Daw
- University of Sheffield, Sheffield S3 7RH, United Kingdom
| | - M G Perry
- University of Sheffield, Sheffield S3 7RH, United Kingdom
| | - J H Buckley
- Washington University, St. Louis, Missouri 63130, USA
| | - C Gaikwad
- Washington University, St. Louis, Missouri 63130, USA
| | - J Hoffman
- Washington University, St. Louis, Missouri 63130, USA
| | - K W Murch
- Washington University, St. Louis, Missouri 63130, USA
| | - M Goryachev
- University of Western Australia, Perth, Western Australia 6009, Australia
| | - B T McAllister
- University of Western Australia, Perth, Western Australia 6009, Australia
| | - A Quiskamp
- University of Western Australia, Perth, Western Australia 6009, Australia
| | - C Thomson
- University of Western Australia, Perth, Western Australia 6009, Australia
| | - M E Tobar
- University of Western Australia, Perth, Western Australia 6009, Australia
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14
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Khatiwada R, Bowring D, Chou AS, Sonnenschein A, Wester W, Mitchell DV, Braine T, Bartram C, Cervantes R, Crisosto N, Du N, Rosenberg LJ, Rybka G, Yang J, Will D, Kimes S, Carosi G, Woollett N, Durham S, Duffy LD, Bradley R, Boutan C, Jones M, LaRoque BH, Oblath NS, Taubman MS, Tedeschi J, Clarke J, Dove A, Hashim A, Siddiqi I, Stevenson N, Eddins A, O'Kelley SR, Nawaz S, Agrawal A, Dixit AV, Gleason JR, Jois S, Sikivie P, Sullivan NS, Tanner DB, Solomon JA, Lentz E, Daw EJ, Perry MG, Buckley JH, Harrington PM, Henriksen EA, Murch KW, Hilton GC. Axion Dark Matter Experiment: Detailed design and operations. Rev Sci Instrum 2021; 92:124502. [PMID: 34972408 DOI: 10.1063/5.0037857] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/16/2020] [Accepted: 11/09/2021] [Indexed: 06/14/2023]
Abstract
Axion dark matter experiment ultra-low noise haloscope technology has enabled the successful completion of two science runs (1A and 1B) that looked for dark matter axions in the 2.66-3.1 μeV mass range with Dine-Fischler-Srednicki-Zhitnisky sensitivity [Du et al., Phys. Rev. Lett. 120, 151301 (2018) and Braine et al., Phys. Rev. Lett. 124, 101303 (2020)]. Therefore, it is the most sensitive axion search experiment to date in this mass range. We discuss the technological advances made in the last several years to achieve this sensitivity, which includes the implementation of components, such as the state-of-the-art quantum-noise-limited amplifiers and a dilution refrigerator. Furthermore, we demonstrate the use of a frequency tunable microstrip superconducting quantum interference device amplifier in run 1A, and a Josephson parametric amplifier in run 1B, along with novel analysis tools that characterize the system noise temperature.
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Affiliation(s)
- R Khatiwada
- Department of Physics, Illinois Institute of Technology, Chicago, Illinois 60616, USA and Fermilab Quantum Institute, Fermi National Accelerator Laboratory, Batavia, Illinois 60510, USA
| | - D Bowring
- Accelerator Physics Division, Fermi National Accelerator Laboratory, Batavia, Illinois 60510, USA
| | - A S Chou
- Particle Physics Division, Fermi National Accelerator Laboratory, Batavia, Illinois 60510, USA
| | - A Sonnenschein
- Particle Physics Division, Fermi National Accelerator Laboratory, Batavia, Illinois 60510, USA
| | - W Wester
- Particle Physics Division, Fermi National Accelerator Laboratory, Batavia, Illinois 60510, USA
| | - D V Mitchell
- Particle Physics Division, Fermi National Accelerator Laboratory, Batavia, Illinois 60510, USA
| | - T Braine
- Department of Physics, University of Washington, Seattle, Washington 98195, USA
| | - C Bartram
- Department of Physics, University of Washington, Seattle, Washington 98195, USA
| | - R Cervantes
- Department of Physics, University of Washington, Seattle, Washington 98195, USA
| | - N Crisosto
- Department of Physics, University of Washington, Seattle, Washington 98195, USA
| | - N Du
- Department of Physics, University of Washington, Seattle, Washington 98195, USA
| | - L J Rosenberg
- Department of Physics, University of Washington, Seattle, Washington 98195, USA
| | - G Rybka
- Department of Physics, University of Washington, Seattle, Washington 98195, USA
| | - J Yang
- Department of Physics, University of Washington, Seattle, Washington 98195, USA
| | - D Will
- Department of Physics, University of Washington, Seattle, Washington 98195, USA
| | - S Kimes
- Department of Physics, University of Washington, Seattle, Washington 98195, USA
| | - G Carosi
- Nuclear and Chemical Sciences Division, Lawrence Livermore National Laboratory, Livermore, California 94550, USA
| | - N Woollett
- Nuclear and Chemical Sciences Division, Lawrence Livermore National Laboratory, Livermore, California 94550, USA
| | - S Durham
- Nuclear and Chemical Sciences Division, Lawrence Livermore National Laboratory, Livermore, California 94550, USA
| | - L D Duffy
- Accelerators and Electrodynamics Group, Los Alamos National Laboratory, Los Alamos, New Mexico 87545, USA
| | - R Bradley
- NRAO Technology Center, National Radio Astronomy Observatory, Charlottesville, Virginia 22903, USA
| | - C Boutan
- National Security Directorate, Pacific Northwest National Laboratory, Richland, Washington 99354, USA
| | - M Jones
- National Security Directorate, Pacific Northwest National Laboratory, Richland, Washington 99354, USA
| | - B H LaRoque
- National Security Directorate, Pacific Northwest National Laboratory, Richland, Washington 99354, USA
| | - N S Oblath
- National Security Directorate, Pacific Northwest National Laboratory, Richland, Washington 99354, USA
| | - M S Taubman
- National Security Directorate, Pacific Northwest National Laboratory, Richland, Washington 99354, USA
| | - J Tedeschi
- National Security Directorate, Pacific Northwest National Laboratory, Richland, Washington 99354, USA
| | - John Clarke
- Department of Physics, University of California, Berkeley, California 94720, USA
| | - A Dove
- Department of Physics, University of California, Berkeley, California 94720, USA
| | - A Hashim
- Department of Physics, University of California, Berkeley, California 94720, USA
| | - I Siddiqi
- Department of Physics, University of California, Berkeley, California 94720, USA
| | - N Stevenson
- Department of Physics, University of California, Berkeley, California 94720, USA
| | - A Eddins
- Department of Physics, University of California, Berkeley, California 94720, USA
| | - S R O'Kelley
- Department of Physics, University of California, Berkeley, California 94720, USA
| | - S Nawaz
- Department of Physics, University of California, Berkeley, California 94720, USA
| | - A Agrawal
- Department of Physics, University of Chicago, Chicago, Illinois 60637, USA
| | - A V Dixit
- Department of Physics, University of Chicago, Chicago, Illinois 60637, USA
| | - J R Gleason
- Department of Physics, University of Florida, Gainesville, Florida 32611, USA
| | - S Jois
- Department of Physics, University of Florida, Gainesville, Florida 32611, USA
| | - P Sikivie
- Department of Physics, University of Florida, Gainesville, Florida 32611, USA
| | - N S Sullivan
- Department of Physics, University of Florida, Gainesville, Florida 32611, USA
| | - D B Tanner
- Department of Physics, University of Florida, Gainesville, Florida 32611, USA
| | - J A Solomon
- Department of Physics, University of Florida, Gainesville, Florida 32611, USA
| | - E Lentz
- Department of Physics, University of Göttingen, 37073 Göttingen, Germany
| | - E J Daw
- Department of Physics, University of Sheffield, Sheffield S10 2TN, United Kingdom
| | - M G Perry
- Department of Physics, University of Sheffield, Sheffield S10 2TN, United Kingdom
| | - J H Buckley
- Department of Physics, Washington University, St. Louis, Missouri 63130, USA
| | - P M Harrington
- Department of Physics, Washington University, St. Louis, Missouri 63130, USA
| | - E A Henriksen
- Department of Physics, Washington University, St. Louis, Missouri 63130, USA
| | - K W Murch
- Department of Physics, Washington University, St. Louis, Missouri 63130, USA
| | - G C Hilton
- Physical Measurement Laboratory, National Institute of Standards and Technology, Gaithersburg, Maryland 20899, USA
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Zhang JJ, Cao W, Xi P, Li L, Qiao S, Luo H, Zhang J, Liu X, Du N. S-Glycosylation of Fluensulfone in Tomatoes: An Important Way of Fluensulfone Metabolism. J Agric Food Chem 2021; 69:12974-12984. [PMID: 34723494 DOI: 10.1021/acs.jafc.1c04725] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
Abstract
Fluensulfone (FSF) becomes increasingly popular because of its nonfumigation application method. However, studies on the metabolic mechanism of FSF in plants are lacking. Here, tomato seedling was cultivated in hydroponic media to investigate the connection among FSF's metabolism in tomato, the regulation of tomato endogenous glycosides, and the elimination of hydrogen peroxide in tomato cells. The accumulation of FSF was only detected in the lower stems of tomatoes; FSF was mainly metabolized into S-glycosylated conjugates in the roots, and the roots were the tissues with the highest metabolite content; and no FSF and metabolites were detected in the upper leaves. In response to FSF stress (2 mg/L for 7 d), the content of sugar and glycosides in the stems of tomato seedlings significantly increased. The amount of some compounds on the pathway related to glucose was affected by FSF. The three precursor compounds (homomethioine, isoleucine, and l-tyrosine) in the pathway of glucosinolate biosynthesis increased significantly under the stress of FSF, which indicates that FSF may compete with them for UGT74B1. Besides, FSF-induced flavonoid glycosides may play a role in the process of removing hydrogen peroxide. This research provides inspiration for the fate of many xenobiotics containing sulfonyl groups in plants.
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Affiliation(s)
- Jing Jing Zhang
- Henan Key Laboratory for Creation and Application of New Pesticides, College of Plant Protection, Henan Agricultural University, Zhengzhou 450002, China
| | - Wanxue Cao
- Green Catalysis Center, College of Chemistry, Zhengzhou University, Zhengzhou 450001, China
| | - Pengxuan Xi
- Green Catalysis Center, College of Chemistry, Zhengzhou University, Zhengzhou 450001, China
| | - Li Li
- Green Catalysis Center, College of Chemistry, Zhengzhou University, Zhengzhou 450001, China
| | - Songtao Qiao
- Henan Key Laboratory for Creation and Application of New Pesticides, College of Plant Protection, Henan Agricultural University, Zhengzhou 450002, China
| | - Huawei Luo
- Henan Key Laboratory for Creation and Application of New Pesticides, College of Plant Protection, Henan Agricultural University, Zhengzhou 450002, China
| | - Jianye Zhang
- Green Catalysis Center, College of Chemistry, Zhengzhou University, Zhengzhou 450001, China
| | - Xiangyang Liu
- Henan Key Laboratory for Creation and Application of New Pesticides, College of Plant Protection, Henan Agricultural University, Zhengzhou 450002, China
| | - Nanshan Du
- College of Horticulture, Henan Agricultural University, Zhengzhou 450002, China
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Guo Z, Lv J, Dong X, Du N, Piao F. Gamma-aminobutyric acid improves phenanthrene phytotoxicity tolerance in cucumber through the glutathione-dependent system of antioxidant defense. Ecotoxicol Environ Saf 2021; 217:112254. [PMID: 33905982 DOI: 10.1016/j.ecoenv.2021.112254] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/08/2021] [Revised: 04/01/2021] [Accepted: 04/11/2021] [Indexed: 06/12/2023]
Abstract
Phenanthrene (PHE), a typical organic pollutant, has drawn attention in recent years due to its toxicity to plants and human health. Gamma-aminobutyric acid (GABA) induce plant tolerance to diverse stresses. However, the role and regulatory mechanisms of GABA in PHE stress responses in plants remains largely uncharacterized. Here, we showed that GABA content increased by 44.5%, 89.2%, 160% and 39.2% under 50, 100, 200 and 300 µM PHE treatment, respectively compared with mock. GABA treatment alleviated PHE-induced growth inhibition in a dose-dependent manner, with the most effective concentration of 50 mM GABA. Although exogenous GABA could not influence the accumulation of PHE in cucumber, it significantly mitigated photosynthetic inhibition and enhanced the transcripts and activities of the antioxidant enzymes such as ascorbate peroxidase (APX), catalase (CAT), peroxidase (POD) and superoxide dismutase (SOD), resulting in less accumulation of hydrogen peroxide (H2O2) and superoxide (O2.-). Importantly, timecourse analyses of glutathione (GSH) homeostasis showed that GABA markedly increased GSH content and GR activity as well as the transcripts of GSH biosynthesis-related genes GSH1, GSH2 and GR during PHE stress. Conversely, pretreatment with GSH biosynthesis inhibitor buthionine sulfoximine (BSO) abolished the GABA-induced changes in PHE stress. Together, these results suggest that GABA enhances tolerance to PHE stress via a GSH-dependent system of antioxidant defense in cucumber.
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Affiliation(s)
- Zhixin Guo
- College of Horticulture, Henan Agricultural University, Zhengzhou 450002, PR China
| | - Jingli Lv
- College of Horticulture, Henan Agricultural University, Zhengzhou 450002, PR China
| | - Xiaoxing Dong
- College of Horticulture, Henan Agricultural University, Zhengzhou 450002, PR China
| | - Nanshan Du
- College of Horticulture, Henan Agricultural University, Zhengzhou 450002, PR China
| | - Fengzhi Piao
- College of Horticulture, Henan Agricultural University, Zhengzhou 450002, PR China.
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Zong MZ, Feng WT, Du N, Yu XJ, Yu WY. Upregulation of long noncoding RNA LEF1-AS1 predicts a poor prognosis in patients with esophageal squamous cell carcinoma. Eur Rev Med Pharmacol Sci 2020; 23:7929-7934. [PMID: 31599448 DOI: 10.26355/eurrev_201909_19007] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Abstract
OBJECTIVE Recent studies have suggested that long noncoding RNAs (lncRNAs) are involved in various tumors. The present research was designed to examine the prognostic values of a newly identified lncRNA, lncRNA LEF1-AS1 (LEF1-AS1), in esophageal squamous cell carcinoma (ESCC). PATIENTS AND METHODS The relative levels of LEF1-AS1 in ESCC tissues and normal esophageal tissues were examined by applying quantitative Real Time-Polymerase Chain Reaction (qRT-PCR). The relations between LEF1-AS1 expressions and clinical factors were analyzed by conducting the Chi-square test. The Kaplan-Meier assay was used for assays of the overall survival (OS) and disease-free survival (DFS) dates. Univariate and multivariate analyses were applied for the identification of the independent prognostic factors for ESCC. RESULTS We showed that LEF1-AS1 was distinctly upregulated in ESCC tissues compared with the matched normal tissues (p < 0.01). Higher levels of LEF1-AS1 were associated with lymph nodes metastasis (p = 0.009) and clinical stage (p = 0.008). Clinical investigation revealed that ESCC patients with high LEF1-AS1 level showed a significant shorter 5-year OS (p = 0.0028) and DFS (p = 0.0025). Multivariate analyses confirmed LEF1-AS1 as an independent prognostic parameter indicating unfavorable clinical prognosis for ESCC patients. CONCLUSIONS The present study suggested that LEF1-AS1 could be a novel ESCC-related lncRNA involved in the clinical progression of ESCC, which may be used as a potential predictor.
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Affiliation(s)
- M-Z Zong
- Department of Oncology, the Affiliated Huaian No. 1 People's Hospital of Nanjing Medical University, Huai'an, Jiangsu, China.
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Yao Q, Zeng FR, Fei LJ, Kong WM, Du N, Wu LM, Wang YM. [Epidemiology of syphilis in Zhejiang province, 2010-2019]. Zhonghua Liu Xing Bing Xue Za Zhi 2020; 41:1313-1318. [PMID: 32867442 DOI: 10.3760/cma.j.cn112338-20200324-00425] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Abstract
Objective: To investigate the epidemiological characteristics of syphilis in Zhejiang province and to provide scientific basis for the development of syphilis prevention and control strategies. Methods: A descriptive epidemiological analysis was conducted on the incidence data of syphilis in Zhejiang from 2010 to 2019. Results: During the period, the incidence rate of syphilis decreased from 94.90/100 000 in 2010 to 53.53/100 000 in 2019 with an average decreasing rate of 6.16%. The annual decreases of the incidences of congenital syphilis, primary syphilis and secondary syphilis were all obvious, which were 43.47%, 21.38% and 14.19% respectively. The proportion of latent syphilis cases increased with year. Except for Lishui, the incidences of syphilis in the remaining 10 prefectures showed declining trends. The incidence rates in both men and women showed declining trends with the average rates of 4.80% and 6.45% respectively. The incidence peaks occurred in old men aged ≥60 years and in sexually active women aged 20-34 years, and the syphilis cases in age group ≥60 years increased significantly. The cases were mainly farmers, accounting for 43.00%. Conclusion: The incidence of syphilis in Zhejiang showed a decreasing trend, but the situation remains serious, indicating that the intensity and quality of the comprehensive prevention and control needs to be further strengthened.
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Affiliation(s)
- Q Yao
- Department of Leprosy and Venereal Diseases Control and Prevention, Zhejiang Provincial Institute of Dermatology, Deqing 313200, China
| | - F R Zeng
- Department of Leprosy and Venereal Diseases Control and Prevention, Zhejiang Provincial Institute of Dermatology, Deqing 313200, China
| | - L J Fei
- Department of Leprosy and Venereal Diseases Control and Prevention, Zhejiang Provincial Institute of Dermatology, Deqing 313200, China
| | - W M Kong
- Department of Leprosy and Venereal Diseases Control and Prevention, Zhejiang Provincial Institute of Dermatology, Deqing 313200, China
| | - N Du
- Department of Leprosy and Venereal Diseases Control and Prevention, Zhejiang Provincial Institute of Dermatology, Deqing 313200, China
| | - L M Wu
- Department of Leprosy and Venereal Diseases Control and Prevention, Zhejiang Provincial Institute of Dermatology, Deqing 313200, China
| | - Y M Wang
- Department of Leprosy and Venereal Diseases Control and Prevention, Zhejiang Provincial Institute of Dermatology, Deqing 313200, China
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19
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Zhao WD, Zhang BX, Cui XH, Zhang J, Du N, Zhang YF. LncRNA AB073614 promotes tumor migration and invasion by repressing CDKN1A in non-small cell lung cancer. Eur Rev Med Pharmacol Sci 2020; 24:7552. [PMID: 32744657 DOI: 10.26355/eurrev_202007_22197] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Abstract
Since this article has been suspected of research misconduct and the corresponding authors did not respond to our request to prove originality of data and figures, "LncRNA AB073614 promotes tumor migration and invasion by repressing CDKN1A in non-small cell lung cancer, by W.-D. Zhao, B.-X. Zhang, X.-H. Cui, J. Zhang, N. Du, Y.-F. Zhang, published in Eur Rev Med Pharmacol Sci 2019; 23 (13): 5815-5822-DOI: 10.26355/eurrev_201907_18320-PMID: 31298333" has been withdrawn. The Publisher apologizes for any inconvenience this may cause. https://www.europeanreview.org/article/18320.
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Affiliation(s)
- W-D Zhao
- Department of Oncosurgery, Weinan Central Hospital of Shannxi Province, Weinan, China
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20
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Guo Z, Du N, Li Y, Zheng S, Shen S, Piao F. Gamma-aminobutyric acid enhances tolerance to iron deficiency by stimulating auxin signaling in cucumber (Cucumis sativusL.). Ecotoxicol Environ Saf 2020; 192:110285. [PMID: 32035398 DOI: 10.1016/j.ecoenv.2020.110285] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/28/2019] [Revised: 01/11/2020] [Accepted: 01/31/2020] [Indexed: 06/10/2023]
Abstract
Iron deficiency severely affects crop yield and quality. Gamma-aminobutyric acid (GABA) plays a vital role in plant responses to multifarious stresses. However, the role of GABA in Fe deficiency responses and the potential mechanisms remain largely unknown in cucumber. Here, we found that Fe deficiency raised the GABA levels in leaves and roots of cucumber. To probe the role of GABA in Fe deficiency, the seedlings were subjected to five levels of GABA concentrations (0, 5, 10, 20 and 40 mmol L-1) for 7 days under Fe deficiency. The results demonstrated that 20 mM GABA in alleviating the Fe deficiency-induced stress was the most effective. GABA pretreatment reduced the Fe deficiency-induced chlorosis and inhibition of photosynthesis and growth, and significantly enhanced the contents of iron in shoots and roots. Exogenous GABA significantly decreased the pH of nutrient solution and increased ferric-chelate reductase (FCR) activity induced by Fe deficiency and the transcript levels of Fe uptake-related genes HA1, FRO2 and IRT1 in roots. GABA also increased the content of auxin (IAA) and expression of auxin biosynthesis (YUC4), response (IAA1), and transport (PIN1) genes under Fe deficiency. Furthermore, exogenous the auxin transport inhibitor 1-naphthylphthalamic acid (NPA) application abolished the GABA-induced changes in Fe deficiency. In summary, we found that GABA improves tolerance to iron deficiency via an auxin-dependent mechanism in cucumber.
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Affiliation(s)
- Zhixin Guo
- College of Horticulture, Henan Agricultural University, Zhengzhou, 450002, PR China
| | - Nanshan Du
- College of Horticulture, Henan Agricultural University, Zhengzhou, 450002, PR China
| | - Yingnan Li
- College of Horticulture, Henan Agricultural University, Zhengzhou, 450002, PR China
| | - Shuxin Zheng
- College of Horticulture, Henan Agricultural University, Zhengzhou, 450002, PR China
| | - Shunshan Shen
- College of Horticulture, Henan Agricultural University, Zhengzhou, 450002, PR China
| | - Fengzhi Piao
- College of Horticulture, Henan Agricultural University, Zhengzhou, 450002, PR China.
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21
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Braine T, Cervantes R, Crisosto N, Du N, Kimes S, Rosenberg LJ, Rybka G, Yang J, Bowring D, Chou AS, Khatiwada R, Sonnenschein A, Wester W, Carosi G, Woollett N, Duffy LD, Bradley R, Boutan C, Jones M, LaRoque BH, Oblath NS, Taubman MS, Clarke J, Dove A, Eddins A, O'Kelley SR, Nawaz S, Siddiqi I, Stevenson N, Agrawal A, Dixit AV, Gleason JR, Jois S, Sikivie P, Solomon JA, Sullivan NS, Tanner DB, Lentz E, Daw EJ, Buckley JH, Harrington PM, Henriksen EA, Murch KW. Extended Search for the Invisible Axion with the Axion Dark Matter Experiment. Phys Rev Lett 2020; 124:101303. [PMID: 32216421 DOI: 10.1103/physrevlett.124.101303] [Citation(s) in RCA: 63] [Impact Index Per Article: 15.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/30/2019] [Revised: 01/23/2020] [Accepted: 02/18/2020] [Indexed: 06/10/2023]
Abstract
This Letter reports on a cavity haloscope search for dark matter axions in the Galactic halo in the mass range 2.81-3.31 μeV. This search utilizes the combination of a low-noise Josephson parametric amplifier and a large-cavity haloscope to achieve unprecedented sensitivity across this mass range. This search excludes the full range of axion-photon coupling values predicted in benchmark models of the invisible axion that solve the strong CP problem of quantum chromodynamics.
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Affiliation(s)
- T Braine
- University of Washington, Seattle, Washington 98195, USA
| | - R Cervantes
- University of Washington, Seattle, Washington 98195, USA
| | - N Crisosto
- University of Washington, Seattle, Washington 98195, USA
| | - N Du
- University of Washington, Seattle, Washington 98195, USA
| | - S Kimes
- University of Washington, Seattle, Washington 98195, USA
| | - L J Rosenberg
- University of Washington, Seattle, Washington 98195, USA
| | - G Rybka
- University of Washington, Seattle, Washington 98195, USA
| | - J Yang
- University of Washington, Seattle, Washington 98195, USA
| | - D Bowring
- Fermi National Accelerator Laboratory, Batavia, Illinois 60510, USA
| | - A S Chou
- Fermi National Accelerator Laboratory, Batavia, Illinois 60510, USA
| | - R Khatiwada
- Fermi National Accelerator Laboratory, Batavia, Illinois 60510, USA
| | - A Sonnenschein
- Fermi National Accelerator Laboratory, Batavia, Illinois 60510, USA
| | - W Wester
- Fermi National Accelerator Laboratory, Batavia, Illinois 60510, USA
| | - G Carosi
- Lawrence Livermore National Laboratory, Livermore, California 94550, USA
| | - N Woollett
- Lawrence Livermore National Laboratory, Livermore, California 94550, USA
| | - L D Duffy
- Los Alamos National Laboratory, Los Alamos, California 87545, USA
| | - R Bradley
- National Radio Astronomy Observatory, Charlottesville, Virginia 22903, USA
| | - C Boutan
- Pacific Northwest National Laboratory, Richland, Washington 99354, USA
| | - M Jones
- Pacific Northwest National Laboratory, Richland, Washington 99354, USA
| | - B H LaRoque
- Pacific Northwest National Laboratory, Richland, Washington 99354, USA
| | - N S Oblath
- Pacific Northwest National Laboratory, Richland, Washington 99354, USA
| | - M S Taubman
- Pacific Northwest National Laboratory, Richland, Washington 99354, USA
| | - J Clarke
- University of California, Berkeley, California 94720, USA
| | - A Dove
- University of California, Berkeley, California 94720, USA
| | - A Eddins
- University of California, Berkeley, California 94720, USA
| | - S R O'Kelley
- University of California, Berkeley, California 94720, USA
| | - S Nawaz
- University of California, Berkeley, California 94720, USA
| | - I Siddiqi
- University of California, Berkeley, California 94720, USA
| | - N Stevenson
- University of California, Berkeley, California 94720, USA
| | - A Agrawal
- University of Chicago, Chicago, Illinois 60637, USA
| | - A V Dixit
- University of Chicago, Chicago, Illinois 60637, USA
| | - J R Gleason
- University of Florida, Gainesville, Florida 32611, USA
| | - S Jois
- University of Florida, Gainesville, Florida 32611, USA
| | - P Sikivie
- University of Florida, Gainesville, Florida 32611, USA
| | - J A Solomon
- University of Florida, Gainesville, Florida 32611, USA
| | - N S Sullivan
- University of Florida, Gainesville, Florida 32611, USA
| | - D B Tanner
- University of Florida, Gainesville, Florida 32611, USA
| | - E Lentz
- University of Göttingen, Göttingen 37077, Germany
| | - E J Daw
- University of Sheffield, Sheffield S3 7RH, United Kingdom
| | - J H Buckley
- Washington University, St. Louis, Missouri 63130, USA
| | | | - E A Henriksen
- Washington University, St. Louis, Missouri 63130, USA
| | - K W Murch
- Washington University, St. Louis, Missouri 63130, USA
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22
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Zhao WD, Zhang BX, Cui XH, Zhang J, Du N, Zhang YF. LncRNA AB073614 promotes tumor migration and invasion by repressing CDKN1A in non-small cell lung cancer. Eur Rev Med Pharmacol Sci 2019; 23:5815-5822. [PMID: 31298333 DOI: 10.26355/eurrev_201907_18320] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Abstract
OBJECTIVE Some researches have showed that long noncoding RNAs (lncRNAs) take part in varieties of biological behaviors during the tumor progression. This study aims to determine whether lncRNA AB073614 functioned in the metastasis of non-small cell lung cancer (NSCLC). PATIENTS AND METHODS Real Time-quantitative Polymerase Chain Reaction (RT-qPCR) was used to detect AB073614 expression in NSCLC tissues. Besides, wound healing assay and transwell assay were conducted in NSCLC cells. Furthermore, the mechanism assays were performed to identify how AB073614 functioned in metastasis of NSCLC cells. RESULTS By comparing with the expression level in adjacent tissues, the AB073614 expression level in NSCLC samples was significantly higher. Moreover, after AB073614 was knocked down, invasion and migration of NSCLC cells were inhibited. And after AB073614 was overexpressed, invasion and migration of NSCLC cells were promoted. Also, mRNA and protein expression level of CDKN1A was upregulated via knockdown of AB073614, while mRNA and protein expression level of CDKN1A was downregulated via overexpression of AB073614. Besides, the expression of CDKN1A in NSCLC tissues was negatively correlated to the expression of AB073614. CONCLUSIONS Our results indicated that AB073614 could enhance cell migration and cell invasion in NSCLC through repressing CDKN1A, which might offer a potential therapeutic choice for patients with NSCLC.
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Affiliation(s)
- W-D Zhao
- Department of Oncosurgery, Weinan Central Hospital of Shannxi Province, Weinan, China.
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23
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Boutan C, Jones M, LaRoque BH, Oblath NS, Cervantes R, Du N, Force N, Kimes S, Ottens R, Rosenberg LJ, Rybka G, Yang J, Carosi G, Woollett N, Bowring D, Chou AS, Khatiwada R, Sonnenschein A, Wester W, Bradley R, Daw EJ, Agrawal A, Dixit AV, Clarke J, O'Kelley SR, Crisosto N, Gleason JR, Jois S, Sikivie P, Stern I, Sullivan NS, Tanner DB, Harrington PM, Lentz E. Piezoelectrically Tuned Multimode Cavity Search for Axion Dark Matter. Phys Rev Lett 2018; 121:261302. [PMID: 30636160 DOI: 10.1103/physrevlett.121.261302] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/22/2018] [Indexed: 06/09/2023]
Abstract
The μeV axion is a well-motivated extension to the standard model. The Axion Dark Matter eXperiment (ADMX) collaboration seeks to discover this particle by looking for the resonant conversion of dark-matter axions to microwave photons in a strong magnetic field. In this Letter, we report results from a pathfinder experiment, the ADMX "Sidecar," which is designed to pave the way for future, higher mass, searches. This testbed experiment lives inside of and operates in tandem with the main ADMX experiment. The Sidecar experiment excludes masses in three widely spaced frequency ranges (4202-4249, 5086-5799, and 7173-7203 MHz). In addition, Sidecar demonstrates the successful use of a piezoelectric actuator for cavity tuning. Finally, this publication is the first to report data measured using both the TM_{010} and TM_{020} modes.
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Affiliation(s)
- C Boutan
- Pacific Northwest National Laboratory, Richland, Washington 99354, USA
| | - M Jones
- Pacific Northwest National Laboratory, Richland, Washington 99354, USA
| | - B H LaRoque
- Pacific Northwest National Laboratory, Richland, Washington 99354, USA
| | - N S Oblath
- Pacific Northwest National Laboratory, Richland, Washington 99354, USA
| | - R Cervantes
- University of Washington, Seattle, Washington 98195, USA
| | - N Du
- University of Washington, Seattle, Washington 98195, USA
| | - N Force
- University of Washington, Seattle, Washington 98195, USA
| | - S Kimes
- University of Washington, Seattle, Washington 98195, USA
| | - R Ottens
- University of Washington, Seattle, Washington 98195, USA
| | - L J Rosenberg
- University of Washington, Seattle, Washington 98195, USA
| | - G Rybka
- University of Washington, Seattle, Washington 98195, USA
| | - J Yang
- University of Washington, Seattle, Washington 98195, USA
| | - G Carosi
- Lawrence Livermore National Laboratory, Livermore, California 94550, USA
| | - N Woollett
- Lawrence Livermore National Laboratory, Livermore, California 94550, USA
| | - D Bowring
- Fermi National Accelerator Laboratory, Batavia, Illinois 60510, USA
| | - A S Chou
- Fermi National Accelerator Laboratory, Batavia, Illinois 60510, USA
| | - R Khatiwada
- Fermi National Accelerator Laboratory, Batavia, Illinois 60510, USA
| | - A Sonnenschein
- Fermi National Accelerator Laboratory, Batavia, Illinois 60510, USA
| | - W Wester
- Fermi National Accelerator Laboratory, Batavia, Illinois 60510, USA
| | - R Bradley
- National Radio Astronomy Observatory, Charlottesville, Virginia 22903, USA
| | - E J Daw
- University of Sheffield, Sheffield S3 7RH, United Kingdom
| | - A Agrawal
- University of Chicago, Illinois 60637, USA
| | - A V Dixit
- University of Chicago, Illinois 60637, USA
| | - J Clarke
- University of California, Berkeley, California 94720, USA
| | - S R O'Kelley
- University of California, Berkeley, California 94720, USA
| | - N Crisosto
- University of Florida, Gainesville, Florida 32611, USA
| | - J R Gleason
- University of Florida, Gainesville, Florida 32611, USA
| | - S Jois
- University of Florida, Gainesville, Florida 32611, USA
| | - P Sikivie
- University of Florida, Gainesville, Florida 32611, USA
| | - I Stern
- University of Florida, Gainesville, Florida 32611, USA
| | - N S Sullivan
- University of Florida, Gainesville, Florida 32611, USA
| | - D B Tanner
- University of Florida, Gainesville, Florida 32611, USA
| | | | - E Lentz
- University of Göttingen, Göttingen 37077, Germany
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24
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He L, Yu L, Li B, Du N, Guo S. The effect of exogenous calcium on cucumber fruit quality, photosynthesis, chlorophyll fluorescence, and fast chlorophyll fluorescence during the fruiting period under hypoxic stress. BMC Plant Biol 2018; 18:180. [PMID: 30180797 PMCID: PMC6122546 DOI: 10.1186/s12870-018-1393-3] [Citation(s) in RCA: 35] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/20/2018] [Accepted: 08/27/2018] [Indexed: 05/23/2023]
Abstract
BACKGROUND Plants often suffer from hypoxic stress during waterlogging and hydroponic culturing. This study investigated the response of cucumber (Cucumis sativus L.) plant growth parameters, leaf photosynthesis, chlorophyll fluorescence, fast chlorophyll a fluorescence transient (OJIP), and fruit quality parameters to hypoxic stress alleviated by exogenous calcium. During the fruiting period, cucumber plants were exposed to hypoxia and hypoxia + Ca2+ treatment (4 mM Ca2+) for 9 d. RESULT Exogenous calcium application enhanced the biomass and fruit quality of hypoxic stressed cucumber and also increased the net photosynthesis rate, stomatal conductance, intercellular CO2 concentration, maximum quantum efficiency of photosystem II photochemistry, actual photochemical efficiency of PSII, photochemical quenching coefficient, and non-photochemical quenching coefficient. Additionally, measurement of chlorophyll a fluorescence transients showed the positive K- and L-bands were more pronounced in leaves treated with hypoxia compared with those with hypoxia + Ca2+, indicating that hypoxic treatment induced uncoupling of the oxygen-evolving complex and inhibited electron transport beyond plastoquinone pool (Qa, Qb) including possible constraints on the reduction of end electron acceptors of photosystem I. Exogenous calcium can reduce these stress-induced damages in cucumber. CONCLUSION This research focused the effect of exogenous calcium on cucumber photosynthesis during the fruiting period under hypoxic stress. Hypoxic stress might impair the photosynthetic electron-transport chain from the donor side of PSII up to the reduction of end acceptors of PSI, and exogenous calcium enhanced electron transport capacity and reduced hypoxic damage of cucumber leaves.
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Affiliation(s)
- Lizhong He
- Shanghai Key Lab of Protected Horticulture Technology, Horticultural Research Institute, Shanghai Academy of Agricultural Science, Shanghai, 201106 China
- Key Laboratory of Southern Vegetable Crop Genetic Improvement, Ministry of Agricultural, College of Horticulture, Nanjing Agricultural University, Nanjing, 210095 China
| | - Li Yu
- Shanghai Key Lab of Protected Horticulture Technology, Horticultural Research Institute, Shanghai Academy of Agricultural Science, Shanghai, 201106 China
- Key Laboratory of Southern Vegetable Crop Genetic Improvement, Ministry of Agricultural, College of Horticulture, Nanjing Agricultural University, Nanjing, 210095 China
| | - Bin Li
- Key Laboratory of Southern Vegetable Crop Genetic Improvement, Ministry of Agricultural, College of Horticulture, Nanjing Agricultural University, Nanjing, 210095 China
- College of Horticulture Shanxi Agriculture University, Taigu, 030801 Shanxi China
| | - Nanshan Du
- Key Laboratory of Southern Vegetable Crop Genetic Improvement, Ministry of Agricultural, College of Horticulture, Nanjing Agricultural University, Nanjing, 210095 China
- Department of Horticulture, Henan Agricultural University, Zhengzhou, 450000 Henan China
| | - Shirong Guo
- Key Laboratory of Southern Vegetable Crop Genetic Improvement, Ministry of Agricultural, College of Horticulture, Nanjing Agricultural University, Nanjing, 210095 China
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25
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Du N, Force N, Khatiwada R, Lentz E, Ottens R, Rosenberg LJ, Rybka G, Carosi G, Woollett N, Bowring D, Chou AS, Sonnenschein A, Wester W, Boutan C, Oblath NS, Bradley R, Daw EJ, Dixit AV, Clarke J, O'Kelley SR, Crisosto N, Gleason JR, Jois S, Sikivie P, Stern I, Sullivan NS, Tanner DB, Hilton GC. Search for Invisible Axion Dark Matter with the Axion Dark Matter Experiment. Phys Rev Lett 2018; 120:151301. [PMID: 29756850 DOI: 10.1103/physrevlett.120.151301] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/04/2018] [Indexed: 05/27/2023]
Abstract
This Letter reports the results from a haloscope search for dark matter axions with masses between 2.66 and 2.81 μeV. The search excludes the range of axion-photon couplings predicted by plausible models of the invisible axion. This unprecedented sensitivity is achieved by operating a large-volume haloscope at subkelvin temperatures, thereby reducing thermal noise as well as the excess noise from the ultralow-noise superconducting quantum interference device amplifier used for the signal power readout. Ongoing searches will provide nearly definitive tests of the invisible axion model over a wide range of axion masses.
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Affiliation(s)
- N Du
- University of Washington, Seattle, Washington 98195, USA
| | - N Force
- University of Washington, Seattle, Washington 98195, USA
| | - R Khatiwada
- University of Washington, Seattle, Washington 98195, USA
| | - E Lentz
- University of Washington, Seattle, Washington 98195, USA
| | - R Ottens
- University of Washington, Seattle, Washington 98195, USA
| | - L J Rosenberg
- University of Washington, Seattle, Washington 98195, USA
| | - G Rybka
- University of Washington, Seattle, Washington 98195, USA
| | - G Carosi
- Lawrence Livermore National Laboratory, Livermore, California 94550, USA
| | - N Woollett
- Lawrence Livermore National Laboratory, Livermore, California 94550, USA
| | - D Bowring
- Fermi National Accelerator Laboratory, Batavia, Illinois 60510, USA
| | - A S Chou
- Fermi National Accelerator Laboratory, Batavia, Illinois 60510, USA
| | - A Sonnenschein
- Fermi National Accelerator Laboratory, Batavia, Illinois 60510, USA
| | - W Wester
- Fermi National Accelerator Laboratory, Batavia, Illinois 60510, USA
| | - C Boutan
- Pacific Northwest National Laboratory, Richland, Washington 99354, USA
| | - N S Oblath
- Pacific Northwest National Laboratory, Richland, Washington 99354, USA
| | - R Bradley
- National Radio Astronomy Observatory, Charlottesville, Virginia 22903, USA
| | - E J Daw
- University of Sheffield, Sheffield S3 7RH, United Kingdom
| | - A V Dixit
- University of Chicago, Illinois 60637, USA
| | - J Clarke
- University of California, Berkeley, California 94720, USA
| | - S R O'Kelley
- University of California, Berkeley, California 94720, USA
| | - N Crisosto
- University of Florida, Gainesville, Florida 32611, USA
| | - J R Gleason
- University of Florida, Gainesville, Florida 32611, USA
| | - S Jois
- University of Florida, Gainesville, Florida 32611, USA
| | - P Sikivie
- University of Florida, Gainesville, Florida 32611, USA
| | - I Stern
- University of Florida, Gainesville, Florida 32611, USA
| | - N S Sullivan
- University of Florida, Gainesville, Florida 32611, USA
| | - D B Tanner
- University of Florida, Gainesville, Florida 32611, USA
| | - G C Hilton
- National Institute of Standards and Technology, Boulder, Colorado 80305, USA
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26
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Xu Y, Yuan Y, Du N, Wang Y, Shu S, Sun J, Guo S. Proteomic analysis of heat stress resistance of cucumber leaves when grafted onto Momordica rootstock. Hortic Res 2018; 5:53. [PMID: 30302257 PMCID: PMC6165847 DOI: 10.1038/s41438-018-0060-z] [Citation(s) in RCA: 26] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/14/2018] [Revised: 05/09/2018] [Accepted: 05/21/2018] [Indexed: 05/22/2023]
Abstract
Various biotic and abiotic stresses threaten the cultivation of future agricultural crops. Among these stresses, heat stress is a major abiotic stress that substantially reduces agricultural productivity. Many strategies to enhance heat stress tolerance of crops have been developed, among which is grafting. Here, we show that Momordica-grafted cucumber scions have intrinsically enhanced chlorophyll content, leaf area, and net photosynthetic rate under heat stress compared to plants grafted onto cucumber rootstock. To investigate the mechanisms by which Momordica rootstock enhanced cucumber scions heat stress tolerance, comparative proteomic analysis of cucumber leaves in response to rootstock-grafting and/or heat stress was conducted. Seventy-seven differentially accumulated proteins involved in diverse biological processes were identified by two-dimensional electrophoresis (2-DE) in conjunction with matrix-assisted laser desorption/ionization time-of-flight/time-of-flight mass spectrometry (MALDI-TOF/TOF MS). The following four main categories of proteins were involved: photosynthesis (42.8%), energy and metabolism (18.2%), defense response (14.3%), and protein and nucleic acid biosynthesis (11.7%). Proteomic analysis revealed that scions grafted onto Momordica rootstocks upregulated more proteins involved in photosynthesis compared to scions grafted onto cucumber rootstocks under heat stress and indicated enhanced photosynthetic capacity when seedlings were exposed to heat stress. Furthermore, the expression of photosynthesis-related genes in plants grafted onto Momordica rootstocks significantly increased in response to heat stress. In addition, increased high-temperature tolerance of plants grafted onto Momordica rootstock was associated with the accumulation of ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) and oxygen-evolving enhancer protein 1 (OEE1). Taken together, the data indicated that Momordica rootstock might alleviate growth inhibition caused by heat stress by improving photosynthesis, providing valuable insight into enhancing heat stress tolerance in the global warming epoch.
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Affiliation(s)
- Ye Xu
- Key Laboratory of Southern Vegetable Crop Genetic Improvement in Ministry of Agriculture, College of Horticulture, Nanjing Agricultural University, Nanjing, China
| | - Yinghui Yuan
- Key Laboratory of Southern Vegetable Crop Genetic Improvement in Ministry of Agriculture, College of Horticulture, Nanjing Agricultural University, Nanjing, China
| | - Nanshan Du
- Department of Horticulture, Henan Agricultural University, Zhengzhou, China
| | - Yu Wang
- Key Laboratory of Southern Vegetable Crop Genetic Improvement in Ministry of Agriculture, College of Horticulture, Nanjing Agricultural University, Nanjing, China
| | - Sheng Shu
- Key Laboratory of Southern Vegetable Crop Genetic Improvement in Ministry of Agriculture, College of Horticulture, Nanjing Agricultural University, Nanjing, China
- Suqian Academy of Protected Horticulture, Nanjing Agricultural University, Suqian, China
| | - Jin Sun
- Key Laboratory of Southern Vegetable Crop Genetic Improvement in Ministry of Agriculture, College of Horticulture, Nanjing Agricultural University, Nanjing, China
- Suqian Academy of Protected Horticulture, Nanjing Agricultural University, Suqian, China
| | - Shirong Guo
- Key Laboratory of Southern Vegetable Crop Genetic Improvement in Ministry of Agriculture, College of Horticulture, Nanjing Agricultural University, Nanjing, China
- Suqian Academy of Protected Horticulture, Nanjing Agricultural University, Suqian, China
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Du N, Shi L, Yuan Y, Sun J, Shu S, Guo S. Isolation of a potential biocontrol agent Paenibacillus polymyxa NSY50 from vinegar waste compost and its induction of host defense responses against Fusarium wilt of cucumber. Microbiol Res 2017. [DOI: 10.1016/j.micres.2017.04.013] [Citation(s) in RCA: 33] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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Li Y, Wang W, Gou XL, Lin N, Le SF, Du N, Yan H, Zhang JH. Determination of N-acetylneuraminic acid in poultry eggs by ultra performance liquid chromatography–tandem mass spectrometry. J Anal Chem 2017. [DOI: 10.1134/s1061934817080081] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Sun X, Du N, Li G, Zhang J, Zhang J, Xiao G, Wang J, Tang SC, Ren H. Abstract P5-07-10: MiR-146a functions as suppressive non-coding gene via indirect upregulation of Let-7 to promote asymmetric division and inhibit the self-renewal ability of breast cancer stem-like cells. Cancer Res 2017. [DOI: 10.1158/1538-7445.sabcs16-p5-07-10] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Abstract
MiR-146a plays as diverse roles in systemic malignancies, stimulating the tumor growth or blocking the tumor proliferation. However, its roles in breast cancer stem-like cells are barely known. We first identified the suppressive role of miR-146a in stem cells' renewal, promoting the asymmetric division of stem-like cells, and the expression of miR-146a was positively related with Let-7b level in vitro and in clinical specimens. Previous studies of Let-7 revealed its suppressive functions in stem-like cells expansion, and miR-146 was predicated to target and bind to the 3'UTR of LIN28, a negative regulator of Let-7 maturation. By using luc-assay and western, results showed that miR-146a increased the Let-7b level through degrading Lin28, and Lin28 is required for miR-146a induction of stem cells arresting and more asymmetric stem cells division. Moreover, Let-7 controlled Wnt signaling pathway activity is governed and strengthened by miR-146a, contributing to decrease the ratio of stem-like cells, forcing stem cells dividing asymmetrically. MiR-146a in turn formed negative feedback loop with Let-7 via the repression of NF-kB and Snai1 caused by Let-7b. Our results suggested the possible miR-146a/LIN28/Let-7/Snai1 signaling pathway in restraining the symmetric cells division, which was referred to the self-renewal capacity of breast cancer-stem like cells, and this axis helps to prohibit long–term tumor resistance and recurrence.MiR-146a plays as diverse roles in systemic malignancies, stimulating the tumor growth or blocking the tumor proliferation. However, its roles in breast cancer stem-like cells are barely known. We first identified the suppressive role of miR-146a in stem cells' renewal, promoting the asymmetric division of stem-like cells, and the expression of miR-146a was positively related with Let-7b level in vitro and in clinical specimens. Previous studies of Let-7 revealed its suppressive functions in stem-like cells expansion, and miR-146 was predicated to target and bind to the 3'UTR of LIN28, a negative regulator of Let-7 maturation. By using luc-assay and western, results showed that miR-146a increased the Let-7b level through degrading Lin28, and Lin28 is required for miR-146a induction of stem cells arresting and more asymmetric stem cells division. Moreover, Let-7 controlled Wnt signaling pathway activity is governed and strengthened by miR-146a, contributing to decrease the ratio of stem-like cells, forcing stem cells dividing asymmetrically. MiR-146a in turn formed negative feedback loop with Let-7 via the repression of NF-kB and Snai1 caused by Let-7b. Our results suggested the possible miR-146a/LIN28/Let-7/Snai1 signaling pathway in restraining the symmetric cells division, which was referred to the self-renewal capacity of breast cancer-stem like cells, and this axis helps to prohibit long–term tumor resistance and recurrence.
Citation Format: Sun X, Du N, Li G, Zhang J, Zhang J, Xiao G, Wang J, Tang S-C, Ren H. MiR-146a functions as suppressive non-coding gene via indirect upregulation of Let-7 to promote asymmetric division and inhibit the self-renewal ability of breast cancer stem-like cells [abstract]. In: Proceedings of the 2016 San Antonio Breast Cancer Symposium; 2016 Dec 6-10; San Antonio, TX. Philadelphia (PA): AACR; Cancer Res 2017;77(4 Suppl):Abstract nr P5-07-10.
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Affiliation(s)
- X Sun
- Cancer Center, The First Affiliated Hospital of Xi'an Jiaotong University, Xi'an, Shaanxi Province, China; The First Affiliated Hospital of Xi'an Jiaotong University, Xi'an, Shaanxi Province, China; Breast Cancer Program and Interdisciplinary Translational Research Team, Georgia Regents University Cancer Center, Augusta, GA; Tianjin Medical University Cancer Institute and Hospital, Tianjin, China
| | - N Du
- Cancer Center, The First Affiliated Hospital of Xi'an Jiaotong University, Xi'an, Shaanxi Province, China; The First Affiliated Hospital of Xi'an Jiaotong University, Xi'an, Shaanxi Province, China; Breast Cancer Program and Interdisciplinary Translational Research Team, Georgia Regents University Cancer Center, Augusta, GA; Tianjin Medical University Cancer Institute and Hospital, Tianjin, China
| | - G Li
- Cancer Center, The First Affiliated Hospital of Xi'an Jiaotong University, Xi'an, Shaanxi Province, China; The First Affiliated Hospital of Xi'an Jiaotong University, Xi'an, Shaanxi Province, China; Breast Cancer Program and Interdisciplinary Translational Research Team, Georgia Regents University Cancer Center, Augusta, GA; Tianjin Medical University Cancer Institute and Hospital, Tianjin, China
| | - J Zhang
- Cancer Center, The First Affiliated Hospital of Xi'an Jiaotong University, Xi'an, Shaanxi Province, China; The First Affiliated Hospital of Xi'an Jiaotong University, Xi'an, Shaanxi Province, China; Breast Cancer Program and Interdisciplinary Translational Research Team, Georgia Regents University Cancer Center, Augusta, GA; Tianjin Medical University Cancer Institute and Hospital, Tianjin, China
| | - J Zhang
- Cancer Center, The First Affiliated Hospital of Xi'an Jiaotong University, Xi'an, Shaanxi Province, China; The First Affiliated Hospital of Xi'an Jiaotong University, Xi'an, Shaanxi Province, China; Breast Cancer Program and Interdisciplinary Translational Research Team, Georgia Regents University Cancer Center, Augusta, GA; Tianjin Medical University Cancer Institute and Hospital, Tianjin, China
| | - G Xiao
- Cancer Center, The First Affiliated Hospital of Xi'an Jiaotong University, Xi'an, Shaanxi Province, China; The First Affiliated Hospital of Xi'an Jiaotong University, Xi'an, Shaanxi Province, China; Breast Cancer Program and Interdisciplinary Translational Research Team, Georgia Regents University Cancer Center, Augusta, GA; Tianjin Medical University Cancer Institute and Hospital, Tianjin, China
| | - J Wang
- Cancer Center, The First Affiliated Hospital of Xi'an Jiaotong University, Xi'an, Shaanxi Province, China; The First Affiliated Hospital of Xi'an Jiaotong University, Xi'an, Shaanxi Province, China; Breast Cancer Program and Interdisciplinary Translational Research Team, Georgia Regents University Cancer Center, Augusta, GA; Tianjin Medical University Cancer Institute and Hospital, Tianjin, China
| | - S-C Tang
- Cancer Center, The First Affiliated Hospital of Xi'an Jiaotong University, Xi'an, Shaanxi Province, China; The First Affiliated Hospital of Xi'an Jiaotong University, Xi'an, Shaanxi Province, China; Breast Cancer Program and Interdisciplinary Translational Research Team, Georgia Regents University Cancer Center, Augusta, GA; Tianjin Medical University Cancer Institute and Hospital, Tianjin, China
| | - H Ren
- Cancer Center, The First Affiliated Hospital of Xi'an Jiaotong University, Xi'an, Shaanxi Province, China; The First Affiliated Hospital of Xi'an Jiaotong University, Xi'an, Shaanxi Province, China; Breast Cancer Program and Interdisciplinary Translational Research Team, Georgia Regents University Cancer Center, Augusta, GA; Tianjin Medical University Cancer Institute and Hospital, Tianjin, China
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Shi L, Du N, Shu S, Sun J, Li S, Guo S. Paenibacillus polymyxa NSY50 suppresses Fusarium wilt in cucumbers by regulating the rhizospheric microbial community. Sci Rep 2017; 7:41234. [PMID: 28198807 PMCID: PMC5304210 DOI: 10.1038/srep41234] [Citation(s) in RCA: 42] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2016] [Accepted: 12/16/2016] [Indexed: 01/15/2023] Open
Abstract
Paenibacillus polymyxa (P. polymyxa) NSY50, isolated from vinegar residue substrate, suppresses the growth of Fusarium oxysporum in the cucumber rhizosphere and protects the host plant from pathogen invasion. The aim of the present study was to evaluate the effects of NSY50 application on cucumber growth, soil properties and composition of the rhizospheric soil microbial community after exposure to Fusarium oxysporum. Bacterial and fungal communities were investigated by Illumina sequencing of the 16S rRNA gene and the internal transcribed spacer (ITS) regions (ITS1 and ITS2). The results showed that NSY50 effectively reduced the incidence of Fusarium wilt (56.4%) by altering the soil physico-chemical properties (e.g., pH, Cmic, Rmic, total N and Corg) and enzyme activities, especially of urease and β-glucosidase, which were significantly increased by 2.25- and 2.64-fold, respectively, relative to the pathogen treatment condition. More specifically, NSY50 application reduced the abundance of Fusarium and promoted potentially beneficial groups, including the Bacillus, Actinobacteria, Streptomyces, Actinospica, Catenulispora and Pseudomonas genera. Thus, our results suggest that NSY50 application can improve soil properties, shift the microbial community by increasing beneficial strains and decreasing pathogen colonization in the cucumber rhizosphere, and reduce the occurrence of cucumber Fusarium wilt, thereby promoting cucumber growth.
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Affiliation(s)
- Lu Shi
- Key Laboratory of Southern Vegetable Crop Genetic Improvement in Ministry of Agriculture, College of Horticulture, Nanjing Agricultural University, Nanjing 210095, People’s Republic of China
| | - Nanshan Du
- Key Laboratory of Southern Vegetable Crop Genetic Improvement in Ministry of Agriculture, College of Horticulture, Nanjing Agricultural University, Nanjing 210095, People’s Republic of China
| | - Sheng Shu
- Key Laboratory of Southern Vegetable Crop Genetic Improvement in Ministry of Agriculture, College of Horticulture, Nanjing Agricultural University, Nanjing 210095, People’s Republic of China
- Suqian Academy of Protected Horticulture, Nanjing Agricultural University, Suqian, China
| | - Jin Sun
- Key Laboratory of Southern Vegetable Crop Genetic Improvement in Ministry of Agriculture, College of Horticulture, Nanjing Agricultural University, Nanjing 210095, People’s Republic of China
- Suqian Academy of Protected Horticulture, Nanjing Agricultural University, Suqian, China
| | - Shuzhan Li
- Key Laboratory of Southern Vegetable Crop Genetic Improvement in Ministry of Agriculture, College of Horticulture, Nanjing Agricultural University, Nanjing 210095, People’s Republic of China
| | - Shirong Guo
- Key Laboratory of Southern Vegetable Crop Genetic Improvement in Ministry of Agriculture, College of Horticulture, Nanjing Agricultural University, Nanjing 210095, People’s Republic of China
- Suqian Academy of Protected Horticulture, Nanjing Agricultural University, Suqian, China
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Du N, Shi L, Yuan Y, Li B, Shu S, Sun J, Guo S. Proteomic Analysis Reveals the Positive Roles of the Plant-Growth-Promoting Rhizobacterium NSY50 in the Response of Cucumber Roots to Fusarium oxysporum f. sp. cucumerinum Inoculation. Front Plant Sci 2016; 7:1859. [PMID: 28018395 PMCID: PMC5155491 DOI: 10.3389/fpls.2016.01859] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/26/2016] [Accepted: 11/25/2016] [Indexed: 05/30/2023]
Abstract
Plant-growth-promoting rhizobacteria (PGPR) can both improve plant growth and enhance plant resistance against a variety of environmental stresses. To investigate the mechanisms that PGPR use to protect plants under pathogenic attack, transmission electron microscopy analysis and a proteomic approach were designed to test the effects of the new potential PGPR strain Paenibacillus polymyxa NSY50 on cucumber seedling roots after they were inoculated with the destructive phytopathogen Fusarium oxysporum f. sp. cucumerinum (FOC). NSY50 could apparently mitigate the injury caused by the FOC infection and maintain the stability of cell structures. The two-dimensional electrophoresis (2-DE) approach in conjunction with MALDI-TOF/TOF analysis revealed a total of 56 proteins that were differentially expressed in response to NSY50 and/or FOC. The application of NSY50 up-regulated most of the identified proteins that were involved in carbohydrate metabolism and amino acid metabolism under normal conditions, which implied that both energy generation and the production of amino acids were enhanced, thereby ensuring an adequate supply of amino acids for the synthesis of new proteins in cucumber seedlings to promote plant growth. Inoculation with FOC inhibited most of the proteins related to carbohydrate and energy metabolism and to protein metabolism. The combined inoculation treatment (NSY50+FOC) accumulated abundant proteins involved in defense mechanisms against oxidation and detoxification as well as carbohydrate metabolism, which might play important roles in preventing pathogens from attacking. Meanwhile, western blotting was used to analyze the accumulation of enolase (ENO) and S-adenosylmethionine synthase (SAMs). NSY50 further increased the expression of ENO and SAMs under FOC stress. In addition, NSY50 adjusted the transcription levels of genes related to those proteins. Taken together, these results suggest that P. polymyxa NSY50 may promote plant growth and alleviate FOC-induced damage by improving the metabolism and activation of defense-related proteins in cucumber roots.
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Affiliation(s)
- Nanshan Du
- Key Laboratory of Southern Vegetable Crop Genetic Improvement in Ministry of Agriculture, College of Horticulture, Nanjing Agricultural UniversityNanjing, China
| | - Lu Shi
- Key Laboratory of Southern Vegetable Crop Genetic Improvement in Ministry of Agriculture, College of Horticulture, Nanjing Agricultural UniversityNanjing, China
| | - Yinghui Yuan
- Key Laboratory of Southern Vegetable Crop Genetic Improvement in Ministry of Agriculture, College of Horticulture, Nanjing Agricultural UniversityNanjing, China
| | - Bin Li
- Department of Horticulture, Shanxi Agricultural UniversityTaigu, China
| | - Sheng Shu
- Key Laboratory of Southern Vegetable Crop Genetic Improvement in Ministry of Agriculture, College of Horticulture, Nanjing Agricultural UniversityNanjing, China
- Suqian Academy of Protected Horticulture, Nanjing Agricultural UniversitySuqian, China
| | - Jin Sun
- Key Laboratory of Southern Vegetable Crop Genetic Improvement in Ministry of Agriculture, College of Horticulture, Nanjing Agricultural UniversityNanjing, China
- Suqian Academy of Protected Horticulture, Nanjing Agricultural UniversitySuqian, China
| | - Shirong Guo
- Key Laboratory of Southern Vegetable Crop Genetic Improvement in Ministry of Agriculture, College of Horticulture, Nanjing Agricultural UniversityNanjing, China
- Suqian Academy of Protected Horticulture, Nanjing Agricultural UniversitySuqian, China
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Shi L, Du N, Yuan Y, Shu S, Sun J, Guo S. Vinegar residue compost as a growth substrate enhances cucumber resistance against the Fusarium wilt pathogen Fusarium oxysporum by regulating physiological and biochemical responses. Environ Sci Pollut Res Int 2016; 23:18277-87. [PMID: 27272925 DOI: 10.1007/s11356-016-6798-7] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/24/2015] [Accepted: 04/29/2016] [Indexed: 05/04/2023]
Abstract
Fusarium wilt caused by the fungus Fusarium oxysporum f. sp. cucumerinum (FOC) is the most severe soil-borne disease attacking cucumber. To assess the positive effects of vinegar residue substrate (VRS) on the growth and incidence of Fusarium wilt on cucumber, we determined the cucumber growth parameters, disease severity, defense-related enzyme and pathogenesis-related (PR) protein activities, and stress-related gene expression levels. In in vitro and pot experiments, we demonstrated the following results: (i) the VRS extract exhibited a higher biocontrol activity than that of peat against FOC, and significantly improved the growth inhibition of FOC, with values of 48.3 %; (ii) in response to a FOC challenge, antioxidant enzymes and the key enzymes of phenylpropanoid metabolic activities, as well as the PR protein activities in the roots of cucumber, were significantly increased. Moreover, the activities of these proteins were higher in VRS than in peat; (iii) the expression levels of stress-related genes (including glu, pal, and ethylene receptor) elicited responses to the pathogens inoculated in cucumber leaves; and (iv) the FOC treatment significantly inhibited the growth of cucumber seedlings. Moreover, all of the growth indices of plants grown in VRS were significantly higher than those grown in peat. These results offer a new strategy to control cucumber Fusarium wilt, by upregulating the activity levels of defense-related enzymes and PR proteins and adjusting gene expression levels. They also provide a theoretical basis for VRS applications.
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Affiliation(s)
- Lu Shi
- Key Laboratory of Southern Vegetable Crop Genetic Improvement in Ministry of Agriculture, College of Horticulture, Nanjing Agricultural University, No 6. Tongwei Road, Nanjing, 210095, China
| | - Nanshan Du
- Key Laboratory of Southern Vegetable Crop Genetic Improvement in Ministry of Agriculture, College of Horticulture, Nanjing Agricultural University, No 6. Tongwei Road, Nanjing, 210095, China
| | - Yinghui Yuan
- Key Laboratory of Southern Vegetable Crop Genetic Improvement in Ministry of Agriculture, College of Horticulture, Nanjing Agricultural University, No 6. Tongwei Road, Nanjing, 210095, China
| | - Sheng Shu
- Key Laboratory of Southern Vegetable Crop Genetic Improvement in Ministry of Agriculture, College of Horticulture, Nanjing Agricultural University, No 6. Tongwei Road, Nanjing, 210095, China
- Facility Horticulture Institute, Nanjing Agricultural University, Suqian, 223800, Jiangsu Province, China
| | - Jin Sun
- Key Laboratory of Southern Vegetable Crop Genetic Improvement in Ministry of Agriculture, College of Horticulture, Nanjing Agricultural University, No 6. Tongwei Road, Nanjing, 210095, China
- Facility Horticulture Institute, Nanjing Agricultural University, Suqian, 223800, Jiangsu Province, China
| | - Shirong Guo
- Key Laboratory of Southern Vegetable Crop Genetic Improvement in Ministry of Agriculture, College of Horticulture, Nanjing Agricultural University, No 6. Tongwei Road, Nanjing, 210095, China.
- Facility Horticulture Institute, Nanjing Agricultural University, Suqian, 223800, Jiangsu Province, China.
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Wang DD, Liu ZW, Han MM, Zhu ZM, Tu YL, Dou CQ, Jin X, Cai SW, Du N. Erratum. Eur Rev Med Pharmacol Sci 2016; 20:788. [PMID: 27010128] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
Affiliation(s)
- D-D Wang
- Department of Hepatobiliary Surgery, the First Affiliated Hospital of Chinese PLA General Hospital, Beijing, China
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Zhao P, Zheng JS, Zhang HH, Yuan CW, Cui SC, Du N, Zhao LY. [Efficacy evaluation and exploration of TACE combined with CT-guided precision microwave ablation treatment for primary liver cancer]. Zhonghua Zhong Liu Za Zhi 2016; 38:138-45. [PMID: 26899335 DOI: 10.3760/cma.j.issn.0253-3766.2016.02.012] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Abstract
OBJECTIVE To analyze the clinical therapeutic efficacy of transcatheter arterial chemoembolization combined with CT-guided percutaneous precision microwave ablation for the treatment of primary liver cancer and its influencing factors. METHODS A total of 126 patients with primary liver cancer were treated by transcatheter arterial chemoembolization combined with CT-guided percutaneous precision microwave ablation from Mar 2010 to Oct 2014 in our center. The treatment effect, postoperative complications and recurrence rates were observed, and the factors related to recurrence and survival time were analyzed. RESULTS All 126 primary liver cancer patients with 201 tumors were ablated for 177 times, and 113 cases with 185 tumors were completed ablated, the complete ablation rate was 92.0%. In all patients, 4 cases had serious complications, the incidence rate was 3.2%. 37 cases had recurrence, with a recurrence rate of 29.4%. All patients were followed up for 10 to 65 months, 17 patients died, and the 1-, 2-, and 3-year cumulative survival rates were 95.2%, 88.1%, and 84.1%, respectively, and the 1-, 2-, and 3-year progression-free-survival rates were 81.5%, 62.7% and 49.2%, respectively .Univariate analysis showed that preoperative AFP level, Child-Pugh score, BCLC stage and the largest tumor size were associated with the survival of patients who received TACE combined with CT-guided precision MWA, and the preoperative AFP level, internal medicine therapy, tumor number and the largest tumor size were associated with the progression-free-survival after the treatment (P<0.05). Multivariate analysis showed that Child-Pugh score and BCLC stage were independent factors affecting the survival of patients with primary liver cancer patients treated with TACE combined with CT guided percutaneous MWA, and the tumor number and the maximum tumor size were independent factors affecting the progression-free-survival of the patients (P<0.05). CONCLUSION TACE combined with CT-guided percutaneous precision microwave ablation therapy for primary liver cancer has reliable safety and efficacy.
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Affiliation(s)
- P Zhao
- Center of Minimally Invasive Interventional Therapy, Beijing Youan Hospital, Capital Medical University, Beijing 100069, China
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Yuan Y, Zhong M, Shu S, Du N, Sun J, Guo S. Proteomic and Physiological Analyses Reveal Putrescine Responses in Roots of Cucumber Stressed by NaCl. Front Plant Sci 2016; 7:1035. [PMID: 27471514 PMCID: PMC4945654 DOI: 10.3389/fpls.2016.01035] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/19/2016] [Accepted: 07/01/2016] [Indexed: 05/03/2023]
Abstract
Soil salinity is a major environmental constraint that threatens agricultural productivity. Different strategies have been developed to improve crop salt tolerance, among which the effects of polyamines have been well-reported. To gain a better understanding of the cucumber (Cucumis sativus L.) responses to NaCl and unravel the underlying mechanism of exogenous putrescine (Put) alleviating salt-induced damage, comparative proteomic analysis was conducted on cucumber roots treated with NaCl, and/or Put for 7 days. The results showed that exogenous Put restored the root growth inhibited by NaCl. Sixty-two differentially expressed proteins implicated in various biological processes were successfully identified by MALDI-TOF/TOF MS. The four largest categories included proteins involved in defense response (24.2%), protein metabolism (24.2%), carbohydrate metabolism (19.4%), and amino acid metabolism (14.5%). Exogenous Put up-regulated most identified proteins involved in carbohydrate metabolism, implying an enhancement in energy generation. Proteins involved in defense response and protein metabolism were differently regulated by Put, which indicated the roles of Put in stress resistance and proteome rearrangement. Put also increased the abundance of proteins involved in amino acid metabolism. Meanwhile, physiological analysis showed that Put could further up-regulated the levels of free amino acids in salt stressed-roots. In addition, Put also improved endogenous polyamines contents by regulating the transcription levels of key enzymes in polyamine metabolism. Taken together, these results suggest that Put may alleviate NaCl-induced growth inhibition through degradation of misfolded/damaged proteins, activation of stress defense, and the promotion of carbohydrate metabolism to generate more energy.
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Affiliation(s)
- Yinghui Yuan
- Key Laboratory of Southern Vegetable Crop Genetic Improvement, Ministry of Agriculture, College of Horticulture, Nanjing Agricultural UniversityNanjing, China
| | - Min Zhong
- Key Laboratory of Southern Vegetable Crop Genetic Improvement, Ministry of Agriculture, College of Horticulture, Nanjing Agricultural UniversityNanjing, China
| | - Sheng Shu
- Key Laboratory of Southern Vegetable Crop Genetic Improvement, Ministry of Agriculture, College of Horticulture, Nanjing Agricultural UniversityNanjing, China
| | - Nanshan Du
- Key Laboratory of Southern Vegetable Crop Genetic Improvement, Ministry of Agriculture, College of Horticulture, Nanjing Agricultural UniversityNanjing, China
| | - Jin Sun
- Key Laboratory of Southern Vegetable Crop Genetic Improvement, Ministry of Agriculture, College of Horticulture, Nanjing Agricultural UniversityNanjing, China
- Suqian Academy of Protected Horticulture, Nanjing Agricultural UniversitySuqian, China
| | - Shirong Guo
- Key Laboratory of Southern Vegetable Crop Genetic Improvement, Ministry of Agriculture, College of Horticulture, Nanjing Agricultural UniversityNanjing, China
- Suqian Academy of Protected Horticulture, Nanjing Agricultural UniversitySuqian, China
- *Correspondence: Shirong Guo
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Du N, Shi L, Du L, Yuan Y, Li B, Sang T, Sun J, Shu S, Guo S. Effect of vinegar residue compost amendments on cucumber growth and Fusarium wilt. Environ Sci Pollut Res Int 2015; 22:19133-41. [PMID: 26250808 DOI: 10.1007/s11356-015-4816-9] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/11/2015] [Accepted: 05/29/2015] [Indexed: 05/04/2023]
Abstract
Fusarium wilt of cucumber caused by Fusarium oxysporum f. sp. cucumerinum J. H. Owen is one of the major destructive soilborne diseases and results in considerable yield losses. Methyl bromide was once the most effective disease control method but has been confirmed as harmful to the environment. Using suppressive media as biological controls to assist crop growth is becoming popular. In this study, Fusarium wilt of cucumber was successfully controlled by a newly identified suppressive media: vinegar residue compost-amended media (vinegar residue compost mixed with peat and vermiculite in a 6:3:1 ratio (v/v) vinegar residue substrate (VRS). Greenhouse experiments were carried out to evaluate the effect of VRS on the growth of cucumber seedlings and disease suppression. The control was peat/vermiculite (2:1, v/v). To identify the mixed media most suitable for the growth of plants and their suppressiveness indicators, we evaluated the biological characteristics of cucumber, the physicochemical and biochemical properties of the growth media, and the enzyme activities. Total organic C (C(org)), microbial biomass C (C(mic)), basal respiration (R(mic)), and enzyme (catalase, invertase, urease, proteinase, phosphatase, β-glucosidase, and hydrolysis of fluorescein diacetate) activities increased significantly after vinegar waste compost amendment. The compost media also showed a significantly positive effect on the growth of cucumber seedlings and the suppression of the disease severity index (DSI, 38% reduction). The cucumber rhizosphere population of F. oxysporum f. sp. cucumerinum (FOC) was significantly lower in VRS than in the control. These results demonstrate convincingly that vinegar residue compost-amended media has a beneficial effect on cucumber growth and could be applied as a method for biological control of cucumber Fusarium wilt.
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Affiliation(s)
- Nanshan Du
- Key Laboratory of Southern Vegetable Crop Genetic Improvement in Ministry of Agriculture, College of Horticulture, Nanjing Agriculture University, No 6. Tongwei Road, Nanjing, 210095, China
| | - Lu Shi
- Key Laboratory of Southern Vegetable Crop Genetic Improvement in Ministry of Agriculture, College of Horticulture, Nanjing Agriculture University, No 6. Tongwei Road, Nanjing, 210095, China
| | - Lantian Du
- Key Laboratory of Southern Vegetable Crop Genetic Improvement in Ministry of Agriculture, College of Horticulture, Nanjing Agriculture University, No 6. Tongwei Road, Nanjing, 210095, China
| | - Yinghui Yuan
- Key Laboratory of Southern Vegetable Crop Genetic Improvement in Ministry of Agriculture, College of Horticulture, Nanjing Agriculture University, No 6. Tongwei Road, Nanjing, 210095, China
| | - Bin Li
- Key Laboratory of Southern Vegetable Crop Genetic Improvement in Ministry of Agriculture, College of Horticulture, Nanjing Agriculture University, No 6. Tongwei Road, Nanjing, 210095, China
| | - Ting Sang
- Key Laboratory of Southern Vegetable Crop Genetic Improvement in Ministry of Agriculture, College of Horticulture, Nanjing Agriculture University, No 6. Tongwei Road, Nanjing, 210095, China
| | - Jin Sun
- Key Laboratory of Southern Vegetable Crop Genetic Improvement in Ministry of Agriculture, College of Horticulture, Nanjing Agriculture University, No 6. Tongwei Road, Nanjing, 210095, China
- Facility Horticulture Institute, Nanjing Agricultural University, Suqian, 223800, Jiangsu Province, People's Republic of China
| | - Sheng Shu
- Key Laboratory of Southern Vegetable Crop Genetic Improvement in Ministry of Agriculture, College of Horticulture, Nanjing Agriculture University, No 6. Tongwei Road, Nanjing, 210095, China
- Facility Horticulture Institute, Nanjing Agricultural University, Suqian, 223800, Jiangsu Province, People's Republic of China
| | - Shirong Guo
- Key Laboratory of Southern Vegetable Crop Genetic Improvement in Ministry of Agriculture, College of Horticulture, Nanjing Agriculture University, No 6. Tongwei Road, Nanjing, 210095, China.
- Facility Horticulture Institute, Nanjing Agricultural University, Suqian, 223800, Jiangsu Province, People's Republic of China.
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Chen D, Li X, Zhao H, Fu Y, Yao F, Hu J, Du N. The efficacy of pemetrexed and bevacizumab intrapleural injection for malignant pleural mesothelioma-mediated malignant pleural effusion. Indian J Cancer 2015; 51 Suppl 3:e82-5. [PMID: 25818740 DOI: 10.4103/0019-509x.154058] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/04/2022]
Abstract
OBJECTIVE The aim of the present study was to evaluate the efficacy and safety of pemetrexed chemotherapy combined with intrapleural injection of pemetrexed and bevacizumab in the treatment of malignant pleural mesothelioma (MPM)-mediated malignant pleural effusion, and analyze the objective response rate (ORR), the median progression-free survival (PFS) and the median overall survival (OS). METHODS We analyzed the clinical data of 23 MPM patients with pleural effusion who were treated with a combination chemotherapy of pemetrexed at 500 mg/m 2 , on day 1 plus cisplatin (DDP) at 20 mg/m 2 on day 1-5 of each 21 days cycle, and concurrently, intrapleural injection of pemetrexed 0.5 g and bevacizumab 300 mg was administered on day 3 or day 4 after complete effusion drainage. ELISA test was applied to detect the vascular endothelial growth factor (VEGF) level in the pleural effusion and serum, and assess the ORR and survival. RESULTS In the 23 evaluable patients, the VEGF level in the pleural effusion and serum was significantly decreased, P < 0.01, pleural effusion of 20 patients (86.96%) was controlled effectively. There were 8 complete responses, 7 partial responses, 5 stable disease and 3 progressive disease, the ORR was 65.21%, the disease control rate was 86.96%, the median PFS was 6 months, the median OS was 14.5 months, and the 1-year survival rate was 41.22%. Toxicities were generally mild and manageable; the major toxicities included myelosuppression, fatigue, and anemia, mainly were grade 1-2 which could be managed by symptomatic treatments. CONCLUSION The combination of pemetrexed chemotherapy with intrapleural injection of pemetrexed and bevacizumab is efficacious and safe for MPM pleural effusion, and results of the present study demonstrate some improvement in the PFS and OS. The expression of VEGF in the pleural effusion and serum plays a guiding role in monitoring the efficacy of bevacizumab in the treatment of malignant pleural effusion.
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Affiliation(s)
| | | | | | | | | | | | - N Du
- Department of Oncology, First Affiliated Hospital of Chinese PLA General Hospital, Beijing 100048, China
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Wang DD, Liu ZW, Han MM, Zhu ZM, Tu YL, Dou CQ, Jin X, Cai SW, Du N. Microarray based analysis of gene expression patterns in pancreatic neuroendocrine tumors. Eur Rev Med Pharmacol Sci 2015; 19:3367-3374. [PMID: 26439030] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
Abstract
OBJECTIVE Pancreatic neuroendocrine tumors (PanNETs) are a small subgroup of tumors with a variety of biological behaviors. MATERIALS AND METHODS We sought to identify the specially expressed genes and characterize significant pathways in PanNETs compared with non-neoplastic samples. Gene expression profile GSE43795 was obtained from Gene Expression Omnibus database, which included 6 PanNETs and 5 non-neoplastic samples. The differentially expressed genes (DEGs) were identified using Limma package. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analyses were used to enrich the functions and pathways of DEGs. Transcription factors (TFs) and tumor-associated genes (TAGs) were also identified. Finally, a protein-protein interaction (PPI) network was constructed, and hub proteins and functional module were screened out. RESULTS Total of 821 DEGs (421 down-regulated, 400 up-regulated) were selected. GO and KEGG enrichment analyses showed that up-regulated DEGs were related to several pathways, including type 2 diabetes mellitus, Ca2+ signaling pathway, long-term potentiation, and long-term depression pathways. Down-regulated DEGs were enriched in several pathways, such as pancreatic secretion, protein digestion and absorption, and metabolic pathway. Interferon-stimulated gene protein 15 (ISG15), somatostatin (SST), and synaptosomal-associated protein 25 kDa (SNAP25) were identified as hub proteins. CONCLUSIONS The genes involved in type 2 diabetes mellitus pathway may play important roles in the development of PanNETs. SNAP25, SST, and ISG15 may be used as potential targets for treatment of PanNETs.
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Affiliation(s)
- D-D Wang
- Department of Hepatobiliary Surgery, the First Affiliated Hospital of Chinese PLA General Hospital, Beijing, China.
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Li F, Zhang D, Li Y, Jiang D, Luo S, Du N, Chen W, Deng L, Zeng C. Whole genome characterization of hepatitis B virus quasispecies with massively parallel pyrosequencing. Clin Microbiol Infect 2015; 21:280-7. [DOI: 10.1016/j.cmi.2014.10.007] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/28/2014] [Revised: 10/04/2014] [Accepted: 10/10/2014] [Indexed: 01/19/2023]
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Du N, Xu J. The Impact on Drug Price and Patiet Selection of National Essential Drug System: Evidence From Inpatient Records from Insurance Reimbursement Data. Value Health 2014; 17:A786-A787. [PMID: 27202929 DOI: 10.1016/j.jval.2014.08.411] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
Affiliation(s)
- N Du
- Southwest University of Finance and Economics, chengdu, China
| | - J Xu
- Southwest University of Finance and Economics, chengdu, China
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Li X, Du N, Zhang Q, Li J, Chen X, Liu X, Hu Y, Qin W, Shen N, Xu C, Fang Z, Wei Y, Wang R, Du Z, Zhang Y, Lu Y. MicroRNA-30d regulates cardiomyocyte pyroptosis by directly targeting foxo3a in diabetic cardiomyopathy. Cell Death Dis 2014; 5:e1479. [PMID: 25341033 PMCID: PMC4237254 DOI: 10.1038/cddis.2014.430] [Citation(s) in RCA: 236] [Impact Index Per Article: 23.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2014] [Revised: 08/27/2014] [Accepted: 09/04/2014] [Indexed: 12/15/2022]
Abstract
Diabetic cardiomyopathy is a common cardiac condition in patients with diabetes mellitus, which can result in cardiac hypertrophy and subsequent heart failure, associated with pyroptosis, the pro-inflammatory programmed cell death. MicroRNAs (miRNAs), small endogenous non-coding RNAs, have been shown to be involved in diabetic cardiomyopathy. However, whether miRNAs regulate pyroptosis in diabetic cardiomyopathy remains unknown. Our study revealed that mir-30d expression was substantially increased in streptozotocin (STZ)-induced diabetic rats and in high-glucose-treated cardiomyocytes as well. Upregulation of mir-30d promoted cardiomyocyte pyroptosis in diabetic cardiomyopathy; conversely, knockdown of mir-30d attenuated it. In an effort to understand the signaling mechanisms underlying the pro-pyroptotic property of mir-30d, we found that forced expression of mir-30d upregulated caspase-1 and pro-inflammatory cytokines IL-1β and IL-18. Moreover, mir-30d directly repressed foxo3a expression and its downstream protein, apoptosis repressor with caspase recruitment domain (ARC). Furthermore, silencing ARC by siRNA mimicked the action of mir-30d: upregulating caspase-1 and inducing pyroptosis. These findings promoted us to propose a new signaling pathway leading to cardiomyocyte pyroptosis under hyperglycemic conditions: mir-30d↑→foxo3a↓→ ARC↓→caspase-1↑→IL-1β, IL-18↑→pyroptosis↑. Therefore, mir-30d may be a promising therapeutic target for the management of diabetic cardiomyopathy.
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Affiliation(s)
- X Li
- Department of Pharmacology (State-Province Key Laboratories of Biomedicine-Pharmaceutics of China, Key Laboratory of Cardiovascular Research, Ministry of Education), Harbin Medical University, Harbin 150081, China
| | - N Du
- Department of Pharmacology (State-Province Key Laboratories of Biomedicine-Pharmaceutics of China, Key Laboratory of Cardiovascular Research, Ministry of Education), Harbin Medical University, Harbin 150081, China
| | - Q Zhang
- Department of Pharmacology (State-Province Key Laboratories of Biomedicine-Pharmaceutics of China, Key Laboratory of Cardiovascular Research, Ministry of Education), Harbin Medical University, Harbin 150081, China
| | - J Li
- Department of Pharmacology (State-Province Key Laboratories of Biomedicine-Pharmaceutics of China, Key Laboratory of Cardiovascular Research, Ministry of Education), Harbin Medical University, Harbin 150081, China
| | - X Chen
- Department of Pharmacology (State-Province Key Laboratories of Biomedicine-Pharmaceutics of China, Key Laboratory of Cardiovascular Research, Ministry of Education), Harbin Medical University, Harbin 150081, China
| | - X Liu
- Department of Pharmacology (State-Province Key Laboratories of Biomedicine-Pharmaceutics of China, Key Laboratory of Cardiovascular Research, Ministry of Education), Harbin Medical University, Harbin 150081, China
| | - Y Hu
- Department of Pharmacology (State-Province Key Laboratories of Biomedicine-Pharmaceutics of China, Key Laboratory of Cardiovascular Research, Ministry of Education), Harbin Medical University, Harbin 150081, China
| | - W Qin
- Department of Pharmacology (State-Province Key Laboratories of Biomedicine-Pharmaceutics of China, Key Laboratory of Cardiovascular Research, Ministry of Education), Harbin Medical University, Harbin 150081, China
| | - N Shen
- Department of Pharmacology (State-Province Key Laboratories of Biomedicine-Pharmaceutics of China, Key Laboratory of Cardiovascular Research, Ministry of Education), Harbin Medical University, Harbin 150081, China
| | - C Xu
- Department of Pharmacology (State-Province Key Laboratories of Biomedicine-Pharmaceutics of China, Key Laboratory of Cardiovascular Research, Ministry of Education), Harbin Medical University, Harbin 150081, China
| | - Z Fang
- Department of Pharmacology (State-Province Key Laboratories of Biomedicine-Pharmaceutics of China, Key Laboratory of Cardiovascular Research, Ministry of Education), Harbin Medical University, Harbin 150081, China
| | - Y Wei
- Department of General Surgery, The First Affiliated Hospital, Harbin Medical University, Harbin 150001, China
| | - R Wang
- Department of Geriatrics, The Second Affiliated Hospital, Harbin Medical University, Harbin 150081, China
| | - Z Du
- 1] Department of Pharmacology (State-Province Key Laboratories of Biomedicine-Pharmaceutics of China, Key Laboratory of Cardiovascular Research, Ministry of Education), Harbin Medical University, Harbin 150081, China [2] Institute of Clinical Pharmacy, The Second Affiliated Hospital, Harbin Medical University, Harbin 150081, China
| | - Y Zhang
- 1] Department of Pharmacology (State-Province Key Laboratories of Biomedicine-Pharmaceutics of China, Key Laboratory of Cardiovascular Research, Ministry of Education), Harbin Medical University, Harbin 150081, China [2] Institute of Cardiovascular Research, Harbin Medical University, Harbin 150081, China
| | - Y Lu
- 1] Department of Pharmacology (State-Province Key Laboratories of Biomedicine-Pharmaceutics of China, Key Laboratory of Cardiovascular Research, Ministry of Education), Harbin Medical University, Harbin 150081, China [2] Institute of Cardiovascular Research, Harbin Medical University, Harbin 150081, China
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Zheng JS, Long J, Sun B, Lu NN, Fang D, Zhao LY, Du N. Transcatheter arterial chemoembolization combined with radiofrequency ablation can improve survival of patients with hepatocellular carcinoma with portal vein tumour thrombosis: extending the indication for ablation? Clin Radiol 2014; 69:e253-63. [PMID: 24581962 DOI: 10.1016/j.crad.2014.01.015] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/25/2013] [Revised: 12/02/2013] [Accepted: 01/14/2014] [Indexed: 12/13/2022]
Abstract
AIM To retrospectively assess long-term survival benefit and safety of transcatheter arterial chemoembolization (TACE) combined with radiofrequency ablation (RFA) in hepatocellular carcinoma (HCC) patients with portal vein tumour thrombosis (PVTT), and to evaluate factors that significantly affect outcomes of these patients. MATERIALS AND METHODS One hundred and thirty-four HCC patients (118 men and 16 women; mean age 54.8 years, range 26-79 years) with PVTT were retrospectively assessed. Patients were treated with TACE combined with RFA. Data analysed included patient demographics, liver volume, Child-Pugh score, and Cancer of the Liver Italian Programme (CLIP) score and imaging findings. Survival time (from occurrence of PVTT to last follow-up) was calculated using the Kaplan-Meier method, predictive factors and its correlation with survival was assessed using the multivariate Cox proportional hazards regression method. RESULTS The median overall survival (OS) time was 29.5 months (range 16.6-42.4 months), the 1, 3, and 5 year OS were 63%, 40%, and 23%. Cox hazards regression analysis revealed that functional remnant liver volume (FRLV), remnant liver volume (RLV)/total liver volume (TLV), radiation, tumour number, vascular endothelial growth factor (VEGF) distribution, and gross type were the only independent predictive factors of outcome (p = 0.039, 0.010, 0.009, 0.034, 0.031, and 0.000, respectively). CONCLUSION TACE combined with RFA was found to be an effective therapy, FRLV and RLV/TLV have close correlation with survival for HCC patients with PVTT type I, II, or partial III and Child-Pugh A or B.
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Affiliation(s)
- J-S Zheng
- Department of Oncology Minimally Invasive Interventional Radiology, Beijing Youan Hospital, Capital Medical University, Beijing 100069, China.
| | - J Long
- Department of Oncology Minimally Invasive Interventional Radiology, Beijing Youan Hospital, Capital Medical University, Beijing 100069, China
| | - B Sun
- Department of Oncology Minimally Invasive Interventional Radiology, Beijing Youan Hospital, Capital Medical University, Beijing 100069, China
| | - N-N Lu
- Department of Oncology Minimally Invasive Interventional Radiology, Beijing Youan Hospital, Capital Medical University, Beijing 100069, China
| | - D Fang
- Department of Oncology Minimally Invasive Interventional Radiology, Beijing Youan Hospital, Capital Medical University, Beijing 100069, China
| | - L-Y Zhao
- Department of Oncology Minimally Invasive Interventional Radiology, Beijing Youan Hospital, Capital Medical University, Beijing 100069, China
| | - N Du
- Department of Oncology Minimally Invasive Interventional Radiology, Beijing Youan Hospital, Capital Medical University, Beijing 100069, China
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Blin J, Du N, Stébé M. Alcohols solubilization in a nonionic fluorinated surfactant based system: Effect on the mesoporous silica characteristics. J Colloid Interface Sci 2012; 373:34-45. [DOI: 10.1016/j.jcis.2011.08.082] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2011] [Revised: 08/29/2011] [Accepted: 08/30/2011] [Indexed: 11/17/2022]
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Rajah TT, Peine KJ, Du N, Serret CA. P3-04-07: Physiological Concentrations of Genistein and 17b-Estradiol Inhibit MDA-MB-231 Breast Cancer Cell Proliferation by Increasing Bax/Bcl2 Ratio and Decreasing pERK1/2 Expression. Cancer Res 2011. [DOI: 10.1158/0008-5472.sabcs11-p3-04-07] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Abstract
Background: Our previous results were the first to show that physiological concentrations (1 μM) of genistein, a soy component, in the presence of17β-estradiol (1 nM) inhibited the cell proliferation of MDA-MB-231 (Estrogen receptor (ER) β positive) breast cancer cells. These results are relevant in premenopausal women with breast cancer of the ERα-negative and ERβ-positive type, especially given the increasing trends of soy intake among the US population in the past decade. The aim of the present study was to identify the mechanism by which genistein plus 17β-estradiol inhibits the cell proliferation of ERα-negative and ERb-positive breast cancer cells. Our hypothesis is that the balance of signaling actions by genistein plus 17β-estradiol from different signaling pathways is likely to lead to the cell's choice to either proliferate or enter the apoptotic pathway. For this purpose, the effect of low and high concentrations of genistein (1 μM and 100 μM) in the presence or absence of 17β-estradiol (1 nM) was studied on the expression of cell signaling proteins involved in cell proliferation, survival and apoptosis (pERK1/2, pAkt, Bax and Bcl2) and correlated to cell proliferation and apoptosis in MDA-MB-231 (ERβ positive and ERα negative) breast cancer cells.
Methods: Cell proliferation was determined by the MTT assay, apoptosis determined microscopically by the use of acridine orange and ethidium bromide dyes and the expression of cell signaling proteins by western blotting.
Results: Our results show that 1μM genistein plus 17β-estradiol significantly increased apoptosis (p<0.05) as compared to the control (12.47% vs 5.87% respectively). Increased expression of Bax/Bcl2 (2.5 fold) along with a decreased expression of phosphorylated ERK1/2 (2 fold) was observed in cells treated with 1μM genistein plus 17β-estradiol as compared to the control cells. Phosphorylated Akt did not show any differences in the treatment condition as compared to the control. High concentrations of genistein (100 μM) in the presence or absence of 17β-estradiol also increased apoptosis; however these changes could not be correlated to the expression of Bax/Bcl2, or pERK1/2.
Conclusion: In conclusion, our results show that physiological concentrations of genistein in the presence of17β-estradiol inhibit cell growth through apoptosis via increased Bax/Bcl2 and a concomitant decrease in pERK1/2 expression. Our results also suggest that different concentrations of genistein elicit cell responses through different signaling mechanisms. These results are especially relevant to the cohort of premenopausal women with breast cancer of the ERβ positive and ERα negative type.
Citation Information: Cancer Res 2011;71(24 Suppl):Abstract nr P3-04-07.
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Affiliation(s)
| | | | - N Du
- 1DePaul University, Chicago, IL
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Mok K, Du N, Schmidt H. Vector-magneto-optical generalized ellipsometry. Rev Sci Instrum 2011; 82:033112. [PMID: 21456723 DOI: 10.1063/1.3568822] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/30/2023]
Abstract
We present the setup of a variable-angle vector-magneto-optical generalized ellipsometer (VMOGE) in the spectral range from 300 to 1100 nm using an octupole magnet, and demonstrate VMOGE measurements of the upper 3 × 4 submatrix of the Mueller matrix in a magnetic field of arbitrary orientation and magnitude up to 0.4 T at room temperature. New "field orbit" measurements can be performed without physically moving the sample, which is useful to study magnetic multilayer or nanostructure samples. A 4 × 4 matrix formalism is employed to model the experimental VMOGE data. Searching the best match model between experimental and calculated VMOGE data, the magneto-optical dielectric tensor ɛ(MO) of each layer in a multilayer sample system can be determined. In this work, we assume that the nonsymmetric terms of ɛ(MO) are induced by an external magnetic field and depend linearly on the sample magnetization. Comparison with vector magnetometer measurements can provide the anisotropic magneto-optical coupling constants Q(x), Q(y), Q(z).
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Affiliation(s)
- K Mok
- Institute of Ion Beam Physics and Materials Research, Helmholtz-Zentrum Dresden-Rossendorf, P.O. Box 510119, 01314 Dresden, Germany.
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Sadik OA, Zhou AL, Kikandi S, Du N, Wang Q, Varner K. Sensors as tools for quantitation, nanotoxicity and nanomonitoring assessment of engineered nanomaterials. ACTA ACUST UNITED AC 2009; 11:1782-800. [DOI: 10.1039/b912860c] [Citation(s) in RCA: 68] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
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Wan L, Wang NB, Li QB, Zhou ZC, Sun B, Xue K, Ma ZQ, Tian J, Du N. Estival distribution of dissolved metal concentrations in Liaodong Bay. Bull Environ Contam Toxicol 2008; 80:311-314. [PMID: 18309448 DOI: 10.1007/s00128-008-9376-y] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/24/2007] [Accepted: 02/12/2008] [Indexed: 05/26/2023]
Abstract
The temporal and spatial distributions of Cu, Pb, Zn, and Cd in surface water of the Liaodong Bay were studied based on samples collected at 16 sites in June and August from 2001 to 2005. The temporal distribution showed decreasing trends. The concentrations of dissolved metals in the Liaodong Bay were 4.34, 3.21, 31.54, and 0.995 mug/L for Cu, Pb, Zn, and Cd, respectively. Cu and Pb were scattered near the estuaries, and Zn and Cd were mainly found near the Wuli River. Rivers were the main metals pollution sources in the Bay.
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Affiliation(s)
- L Wan
- College of Environmental Science and Engineering, Dalian Maritime University, Dalian, 116026, China.
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Li N, Xu B, Dong W, Qiao S, Lee LF, Zhang HM, Li M, Du N. Detection and localization of naturally transmitted avian leukosis subgroup J virus in egg-type chickens by in situ PCR hybridization. ACTA ACUST UNITED AC 2008; 54:553-8. [PMID: 18045338 DOI: 10.1111/j.1439-0442.2007.01008.x] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Avian leukosis virus (ALV) subgroup J (ALV-J) is an exogenous ALV and causes myeloid leukosis in meat-type chickens. We have previously reported the isolation and identification of ALV-J in commercial layer flocks from 12 farms in northern China. In this report, we further characterized this virus by in situ polymerase chain reaction (PCR) hybridization in various affected organs of chickens from six of the 12 farms. A routine method for hybridization of nucleic acid uses radioactive probe, such as a P32-labelled probe. We found that the non-radioactive digoxigenin (DIG) probe is sensitive enough to detect the nucleic acid of virus in chicken tissues. We used a pair of published primers (H5/H7) specific to the gp85 envelope gene and 3' region of pol gene of prototype ALV-J strain HPRS-103. The total RNA extracted from tumour, bone marrow, oviduct, liver and spleen of the diseased chickens from six commercial flocks, and cDNA was successfully amplified. Using the primers and cDNA, we obtained an ALV-J-specific cDNA probe of 545 bp in length by PCR. In situ PCR with H5/H7 primers was carried out in the paraffin sections from tissues of the diseased chickens, followed by in situ hybridization using the DIG-labelled cDNA probe. Positive hybridization signals were detected in the cytoplasm of paraffin sections of tumours and other organ tissues. The intensity of the signals was documented using an image analysis system measuring integral optical density (IOD). The IOD values for tissue sections treated by in situ PCR hybridization are significantly higher than that by in situ hybridization alone (P < 0.01). These data taken together suggest that in situ PCR hybridization is a more sensitive technique for detection of ALV-J in tissue sections.
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Affiliation(s)
- N Li
- College of Veterinary Medicine, China Agricultural University, Beijing 100094, China
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Oguri K, Zhao L, Du N, Kato Y, Miyamoto K, Hayakawa M, Kurokawa J, Nagasaki S, Matsuoka T. Association of habitual long-distance running with the thickness of skeletal muscles and subcutaneous fat in the body extremities and trunk in middle-aged men. J Sports Med Phys Fitness 2004; 44:417-23. [PMID: 15758855] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/02/2023]
Abstract
AIM We investigated the association of habitual long-distance running with the thickness of skeletal muscles and subcutaneous fat in the body extremities and trunk in middle-aged men using ultrasonography. METHODS Three groups of healthy middle-aged men [mean (SD), 62.1 (2.8) years] took part in this investigation: a high-level group of 11 master runners who had competed in a 42.195 km race and run 51.6 (21.7) km every week, an intermediary-level group of 10 master runners who had competed in a 5-20 km race and run 9.3 (4.9) km every week, and a low-level group of 7 untrained men who continued to do no systematic training. The muscle thickness at 8 sites and the subcutaneous fat thickness at 10 sites were measured by B-mode ultrasonography, and were compared among the 3 groups. RESULTS The high-level group had 10.0(-1)5.2% higher values for muscle thickness at the erector spinae, hamstrings, tibialis anterior, and triceps surae, compared with the intermediary-level and the low-level groups (p<0.05-0.001). The thickness of the subcutaneous fat about the rectus abdominis and external oblique was lower in the high-level group than in the intermediary-level and the low-level groups (p<0.05). CONCLUSIONS Middle-aged male master athletes who habitually run at a high level have more muscle thickness in the lower extremities and trunk, and less subcutaneous fat thickness in the central regions of the body than do middle-aged men who habitually run at an intermediary level or do not run at all.
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Affiliation(s)
- K Oguri
- Department of Sports Medicine and Sports Science, Gifu University School of Medicine, Gifu, Japan.
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