Laboratory and field evaluation of a low-cost optical particle sizer

Low-cost sensors are widely used to collect high-spatial-resolution particulate matter data that traditional reference monitoring devices cannot. In addition to the mass concentration, the number concentration and size distribution are also fundamental in determining the origin and hazard level of particulate pollution. Therefore, low-cost optical sensors have been improved to establish optical particle sizers (OPSs). In this study, a low-cost OPS, the Nova SDS029, is introduced, and it is evaluated in comparison to two reference instruments-the GRIMM 11-D and the TSI 3330. We first tested the sizing accuracy using polystyrene latex spheres. Then, we assessed the mass and number size distribution accuracy in three application scenarios: indoor smoking, ambient air quality, and mobile monitoring. The evaluations suggest that the low-cost SDS029 rivals research-grade optical sizers in many aspects. For example, (1) the particle diameters obtained with the SDS029 are close to the reference instruments (usually < 10%) in the 0.3-5 µm range; (2) the number of particles and mass concentration are highly correlated (r ≥ 0.99) with the values obtained with the reference instruments; and (3) the SDS029 slightly underestimates the number concentration, but the derived PM2.5 values are closer to monitoring station than the reference instruments. The successful application of the SDS029 in multiple scenarios suggests that a plausible particle size distribution can be obtained in an easy and cost-efficient way. We believe that low-cost OPSs will increasingly be used to map the sources and risk levels of particles at the city scale.

Optimizing a twin-chamber system for direct ozone production rate measurement

High Ozone Production Rate (OPR) leads to O3 pollution episodes and adverse human health outcomes. OPR observation (Obs-OPR) and OPR modelling (Mod-OPR) have been obtained from observed and modelled peroxy radicals and nitrogen oxides. However, discrepancies between them remind of an imperfect understanding of O3 photochemistry. Direct measurement of OPR (Mea-OPR) by a twin-chamber system emerges. Herein, we optimized Mea-OPR design, i.e., minimizing the chamber surface area to volume ratio (S/V) to 9.8 m-1 from 18 m-1 and the dark uptake coefficient of O3 to 9.9 × 10-9 from 7.1 × 10-8 in the literature. In addition, control experiments further revealed and quantified a photo-enhanced O3 uptake, and therefore recommended an essential correction of Mea-OPR. We finally characterized a measurement uncertainty of ±38% and a detection limit of 3.2 ppbv h-1 (3SD), which suggested that Mea-OPR would be sensitive enough to measure OPR in urban or suburban environments. Further application of this system in urban Beijing during the Beijing 2022 Olympic Winter Games recorded a noontime OPR of 7.3 (±3.3, 1SD) ppbv h-1. These observational results added up to our confidence in future field application of Mea-OPR, to facilitate pollution control policy evaluation and to shed light on O3 photochemistry puzzle.

Safe and efficient drilling and completion technology for deep shale gas in Sichuan and Chongqing

The world is rich in coalbed methane (CBM) resources and has broad exploration and development prospects. In this paper, first, the technical difficulties of drilling and completion in deep shale formations in the Sichuan and Chongqing region is systematically summarized. Second, a systematic evaluation was conducted on the optimization of temperature resistance performance and trajectory control technology of the rotary guidance system. Third, evaluation and economic analysis were conducted on the experimental effects of different technologies. Results show that: (a) the optimization technology for temperature resistance performance of integrated high-temperature resistant guide head and surface cooling equipment has been formed, which can effectively reduce the circulation cooling time and improve drilling efficiency. (b) Real time measurement of underground engineering parameters and monitoring and evaluation of wellbore cleanliness can reduce drilling risks, while achieving quantitative evaluation of drilling fluid gas content. (c) Assisted by real-time optimization technology of mechanical drilling speed based on underground surface engineering parameters, the acceleration effect has been significantly improved.

Implementing a novel capture and ligation probe-PCR method in mass screen and treatment to support malaria elimination efforts in the China-Myanmar border region

BACKGROUND

Mass screening and treatment (MSAT) for malaria elimination lacks an ideal diagnostic tool to allow sensitive and affordable test of the target population in the field. This study evaluated whether Capture and Ligation Probe-PCR (CLIP-PCR) could be used in a field MSAT in Laiza City, Myanmar.

METHODS

On day 0, two dried blood spots were collected from each participant. On day 1, all samples were screened for Plasmodium in a 20 m² laboratory with workbench, a biosafety cabinet, a refrigerator, a benchtop shaking incubator and a qPCR machine, by four technicians using CLIP-PCR with sample pooling, at a health clinic of the Chinese bordering town of Nabang. On day 2, all positives were followed up and treated.

RESULTS

Of 15,038 persons (65% of the total population) screened, 204 (1.36%) were CLIP-PCR positives. Among them, 188, 14, and 2 were infected with Plasmodium vivax, Plasmodium falciparum, and P. vivax/P. falciparum mix, respectively. The testing capacity was 538 persons/day, with a cost of US$0.92 /person. The proportion of submicroscopic infection was 64.7%. All positive individuals received treatment within 72 h after blood collection.

CONCLUSION

Using CLIP-PCR in MSAT in low transmission settings can support the malaria elimination efforts in the China-Myanmar border region.

Photocatalytic and oxidation mechanisms of Fe-Ag@AgCl: Effect on co-existing arsenic (III) and Escherichia coli

To address the drinking safety problems associated with high arsenic(III) (As(III)) and bacteria in underground water, core-shell Fe-Ag@AgCl nanowires were synthesized and exhibited excellent photocatalytic oxidation effects on co-existing As(III) and Escherichia coli (E. coli). With the introduction of Fe, the nanowires that were used 5 times could be easily magnetically collected, and the As(III) oxidation effect of these re-chlorinated nanowires increased from 39% to 60%. E. coli was completely inactivated within 60 min without photoreactivation after 20 min. Extracellular polymeric substances have play a protective role in the disinfection process. Quenching testing results confirmed that, except for the superoxide radical (•O₂^-), the subdominant active species were different for different objects: hole (h_VB⁺) to As(III) and hydroxyl radical (•OH) to E. coli. Therefore the system with co-existing As(III) and E. coli, the inactivation effect of Fe-Ag@AgCl on E. coli decreased remarkably with an increase in As(III) concentration, while the oxidation process of As(III) was not significantly affected by E. coli until E. coli was increased to 10⁸ cfu/mL. The photocatalytic process of co-existing As(III) and E. coli is displayed in a schematic diagram and was tested using desired results obtained from field groundwater in Xiantao City, Hubei Province. The function of Fe in band structures and density of states was analyzed using plane-wave density functional theory. These magnetic nanowires presented excellent photocatalytic ability on co-existing As(III) and E. coli, and provided new insights into drinking water safety in high-arsenic areas.

Using the carbon balance method based on fuel-weighted average concentrations to estimate emissions from household coal-fired heating stoves

In China, household coal burning accounts for a large proportion of primary fine particulate matter (PM_2.5), black carbon (BC), organic carbon (OC), polycyclic aromatic hydrocarbons (PAHs) and carbon monoxide (CO) emissions. Previous field investigations generally measured short-term emissions from heating coal stoves, which did not provide a full characterization of the actual conditions in most cases, or resulted in large uncertainties in the calculated emission factors (EFs). In this study, we propose a sampling design using a chimney partial-capture dilution system in the field measurement of household coal-fired heating stoves emissions during selected periods within the different burn phases and then using the carbon balance method (CBM) based on fuel-weighted average concentrations (FWAC) from the different burn phases to quantify emissions. We evaluated this proposed methodology by comparing the results with a laboratory total-capture dilution-tunnel system. Statistical analysis indicated that emissions measured during the selected burn cycle periods using the dilution sampling system can generally represent emissions at different burn phases; however, different dilution ratios can affect EFs for PM_2.5 and OC. EFs of air pollutants derived by CBM with FWAC are more representative of the actual emissions than simple average concentration (SAC) and time-weighted average concentrations (TWAC). In the field application, to quantify FWAC, it is suggested to determine the ratio of power in the jth burn phase (P_j) to that in the high power phase (P_H) of the stove, i.e., P_j/P_H values with the calorimeter. If measured P_j/P_H values are not available, the recommended value in this study is also suggested.

Field application of nanoliposomes delivered quercetin by inhibiting specific hsp70 gene expression against plant virus disease

BACKGROUND

The annual economic loss caused by plant viruses exceeds 10 billion dollars due to the lack of ideal control measures. Quercetin is a flavonol compound that exerts a control effect on plant virus diseases, but its poor solubility and stability limit the control efficiency. Fortunately, the development of nanopesticides has led to new ideas.

RESULTS

In this study, 117 nm quercetin nanoliposomes with excellent stability were prepared from biomaterials, and few surfactants and stabilizers were added to optimize the formula. Nbhsp70er-1 and Nbhsp70c-A were found to be the target genes of quercetin, through abiotic and biotic stress, and the nanoliposomes improved the inhibitory effect at the gene and protein levels by 33.6 and 42%, respectively. Finally, the results of field experiment showed that the control efficiency was 38% higher than that of the conventional quercetin formulation and higher than those of other antiviral agents.

CONCLUSION

This research innovatively reports the combination of biological antiviral agents and nanotechnology to control plant virus diseases, and it significantly improved the control efficiency and reduced the use of traditional chemical pesticides.

Ultrasensitive detection of trace chemical warfare agent-related compounds by thermal desorption associative ionization time-of-flight mass spectrometry

A thermal desorption associative ionization time-of-flight mass spectrometer was developed for ultrasensitive detection of semi-volatile chemical warfare agents (CWAs). The excited-state CH₂Cl₂-induced associative ionization method presented a soft ionization characterization and an excellent sensitivity towards CWAs. The detection sensitivities of the investigated nine CWA-related substances were 2.56 × 10⁵-5.01 × 10⁶ counts ng^-1 in a detection cycle (30 s or 100 s). The corresponding 3σ limits of detection (LODs) were 0.08-3.90 pg. Compared with the best-documented LODs via the dielectric barrier discharge ionization (DBDI) and secondary electrospray ionization (SESI), the obtained LODs of the investigated compounds were improved by 2-76 times. Additionally, the measured sensitivity of 2-Chloroethyl ethyl, a proxy for mustard gas, is 550 counts pptv^-1, which exceeds the DBDI and SESI's corresponding values (4.4 counts pptv^-1 and 6.5 counts pptv^-1) nearly by two orders of magnitude. A field application simulation was conducted by putting a strip of PTFE film contaminated with the CWA-related agent into the thermal desorption unit. The simulation showed that the sensitivities of the instrument via swipe surveying could achieve 2.19 × 10⁵ to 5.23 × 10⁶ counts ng^-1. The experimental results demonstrate that the excited-state CH₂Cl₂-induced associative ionization is an ultrasensitive ionization method for CWAs and reveal a prospect for improving the detection of CWA species future.

Analysis of the effect of air temperature on ammonia emission from band application of slurry

Field application of liquid animal manure (slurry) is a significant source of ammonia (NH₃) emission to the atmosphere. It is well supported by theory and previous studies that air temperature effects NH₃ flux from field applied slurry. The objectives of this study was to statistically model the response of temperature at the time of application on cumulative NH₃ emission. Data from 19 experiments measured with the same system of dynamic chambers and online measurements were included. A generalized additive model allowing to represent non-linear functional dependences of the emission on the temperature revealed that a positive response of the cumulative NH₃ emission on the temperature at the time of application up to a temperature of approximately 14 °C. Above that, the temperature effect is insignificant. Average temperature over the measuring period was not found to carry any additional information on the cumulative NH₃ emission. The lack of emission response on temperature above a certain point is assumed to be caused by drying out of the slurry and possible crust formation. This effect is hypothesized to create a physical barrier that reduce diffusion of NH₃ to the soil surface, thereby lowering the emission rate. Furthermore, the effect of the interaction between soil type and application technique and the effect of dry matter content of the slurry was derived from the model, and found to be significant on cumulative NH₃ emission predictions.

Porous media transport of iron nanoparticles for site remediation application: A review of lab scale column study, transport modelling and field-scale application

Injection of surface modified zero valent iron nanoparticles for in situ remediation of soil, contaminated with an array of pollutants has attracted great attention due to the high reactivity of zero valent iron towards a broad range of contaminants, its cost effectiveness, minimal physical disruption and low toxicity. The effectiveness of this technology relies on the stability and mobility of injected iron nanoparticles. Hence the development of a modelling tool capable of predicting nZVI transport is indispensable. This review provides state of the art knowledge on the mobility of iron nanoparticles in porous media, mechanisms involved in subsurface retention of nZVI based on continuum models and field scale application. Special attention is given to the identification of the influential parameters controlling the transport potential of iron nanoparticles and the available numerical models for the simulation of laboratory scale transport data.

Development of a real-time automated monitoring system for managing the hazardous environmental pollutants at the construction site

The management of noise, vibration, and dust, which are hazardous pollutants from construction sites, is essential to minimize the health damage of the nearby residents and the economic damage of construction companies due to pollutants from construction sites. For the effective management of hazardous pollutants, their emissions from construction sites must be identified immediately and accurately. Therefore, this study developed a real-time automated monitoring system named "MOnitoring for Noise, Vibration, and Dust (MONVID)" for comprehensively measuring the hazardous environmental pollutants and managing them in real-time. Toward this end, the optimal design of MONVID was planned and customized considering mobility, usability, and economy. Also, for the field application of the developed MONVID, its feasibility was verified by comparing its techno-economic performance with that of the conventional measurement system through experiments. Based on the results of the experiment and performance evaluation, it was concluded that MONVID is a feasible and economical construction pollutant measurement system with reliable technical performance and improved mobility and usability compared to the conventional measurement system. This study has significant contributions to the development of the first platform (including hardware, sensor network, and software) for the integrated real-time automated monitoring of the environmental performance of construction sites.

Rhizoremediation as a green technology for the remediation of petroleum hydrocarbon-contaminated soils

Rhizoremediation is increasingly becoming a green and sustainable alternative to physico-chemical methods for remediation of contaminated environments through the utilization of symbiotic relationship between plants and their associated soil microorganisms in the root zone. The overall efficiency can be enhanced by identifying suitable plant-microbe combinations for specific contaminants and supporting the process with the application of appropriate soil amendments. This approach not only involves promoting the existing activity of plants and soil microbes, but also introduces an adequate number of microorganisms with specific catabolic activity. Here, we reviewed recent literature on the main mechanisms and key factors in the rhizoremediation process with a particular focus on soils contaminated with total petroleum hydrocarbon (TPH). We then discuss the potential of different soil amendments to accelerate the remediation efficiency based on biostimulation and bioaugmentation processes. Notwithstanding some successes in well-controlled environments, rhizoremediation of TPH under field conditions is still not widespread and considered less attractive than physico-chemical methods. We catalogued the major pitfalls of this remediation approach at the field scale in TPH-contaminated sites and, provide some applicable situations for the future successful use of in situ rhizoremediation of TPH-contaminated soils.

Fate and transport of sulfidated nano zerovalent iron (S-nZVI): A field study

Treatment of nano zerovalent iron (nZVI) with lower valent forms of sulfur compounds (sulfidation) has the potential to increase the selectivity and reactivity of nZVI with target contaminants and to decrease inter-particle aggregation for improving its mobility. These developments help in addressing some of the long-standing challenges associated with nZVI-based remediation treatments and are of great interest for in situ applications. Herein we report results from a field-scale project conducted at a contaminated site. Sulfidated nZVI (S-nZVI) was prepared on site by first synthesizing carboxymethyl cellulose (CMC) stabilized nZVI with sodium borohydride as a reductant and then sulfidating the nZVI suspension by adding sodium dithionite. Transmission electron microscopy (TEM) coupled with energy dispersive X-ray spectroscopy (EDS) of CMC-S-nZVI, from synthesis barrels, confirms the presence of both discrete spherical nZVI-like particles (∼90 nm) as well as larger irregular structures (∼500 nm) comprising of iron sulfides. This CMC-S-nZVI suspension was gravity fed into a sandy material and monitored through multiple multi-level monitoring wells. Samples collected from upstream and downstream wells suggest very good radial and vertical iron distribution. TEM-EDS analysis from the recovered well samples also indicates the presence of both nZVI-like particles as well as the larger flake-like structures, similar to those found in the injected CMC-S-nZVI suspension. This study shows that S-nZVI stabilized with CMC can be safely synthesized on site and is highly mobile and stable in the subsurface, demonstrating for the first time the field applicability of S-nZVI.

Variation of efficiencies and limits of ultrasonication for practical algal bloom control in fields

Algal blooms are an increasing issue in managing water resources for drinking water production and recreational activities in many countries. Among various techniques, ultrasonication is known as a cost-effective method for control of harmful algal blooms (HABs) in relatively large area of water bodies. Most of engineering parameters for operating ultrasonication have been empirically determined based on laboratory scale tests, however, field or pilot tests in real environments are still rare. For field application, duration of ultrasonication is often on a monthly basis which is impractical for stream where there is flow and thus retention time is short. More realistic experimental approaches are required for practical applications of ultrasound. In this study, relatively low frequencies (36-175 kHz) of ultrasonication with low power intensity, less than 650 W, were tested for algal control in various pilot (100-750 L) and field (4 m³) tests in a short duration (<20 min). Generally, rapid decline of sound pressure (Pa) of ultrasonication was observed with distance (80% decrease even with 0.5 m difference). In a pilot test (100 L), the highest algae reduction was achieved at 36 kHz with 0.003 W mL^-1 of power density within 10 min duration, but there was a noticeable increase in microcystin due to damaged algal cells by the low frequency of ultrasound. In a short-term operation without flow, distance from the ultrasound system was an important parameter for effective algae reduction, while longer exposure time ensured sufficient algae reduction. In a circulation pond (4 m³) with flow, 108 kHz-450 W showed the greatest efficiency in algal control and approximately 50-90% algal cells reduction was observed at 36-175 kHz with less than 650 W power and 60 min duration.

Application of rice (Oryza sativa L.) root endophytic diazotrophic Azotobacter sp. strain Avi2 (MCC 3432) can increase rice yield under green house and field condition

Use of plant-associated beneficial microbes, especially endophytes are getting popular day by day as they occupy a relatively privileged niche inside different plant tissues with lesser competition for food and shelter than rhizosphere. The effects of different physical factors like temperature, rainfall, and seasonal variation and UV radiation on plant growth promoting endophytic communities are less pronounced than those on the rhizospheric and phylloplane microbes. This present work has been compromised with further utilization of an indigenous rice (Oryza sativa L.) root endophytic Azotobacter sp. strain Avi2 (MCC 3432) (AzA) as a bio-formulation for sustainable rice production based on several physiological parameters (plant height, root length/weight, leaf area, yield, chlorophyll contain), in-vitro comparative plant growth promoting assays, greenhouse and field experiments (dry and wet season). Treatments with AzA exhibited higher yield as well as maximal chlorophyll fluorescence (Fm) of flag leaves in flowering and grain filling stages indicating higher photosynthetic rates. Scanning electron microscopic image of rice roots demonstrated accumulation of bacterial biofilm at the junction of primary and lateral root confirming the root-colonizing ability of the bacterium. The results of the study were quite encouraging as AzA exhibited better vegetative and reproductive growth of rice in pot and field experiment compared to formulated rhizospheric Azotobacter sp. (commercial product). Apart from that plants treated with AzA (supplemented 50% nitrogenous fertilizer of recommended dose) exhibited similar yield parameters when it was compared with the recommended dose of fertilizer (RDF; 120:60:60 mg N:P:K kg^-1 soil/ without any bacterial). Therefore, it can be concluded that application of this plant growth promoting endophyte can reduce a substantial amount of N-fertilizer for field application.

Carbon and hydrogen isotope analysis of parathion for characterizing its natural attenuation by hydrolysis at a contaminated site

The applicability of compound-specific isotope analysis (CSIA) for assessing in situ hydrolysis of parathion was investigated in a contaminated aquifer at a former pesticide wastes landfill site. Stable isotope analysis of parathion extracted from groundwater taken from different monitoring wells revealed a maximum enrichment in carbon isotope ratio of +4.9‰ compared to the source of parathion, providing evidence that in situ hydrolysis took place. Calculations based on the Rayleigh-equation approach indicated that the natural attenuation of parathion was up to 8.6% by hydrolysis under neutral and acidic conditions. In degradation experiments with aerobic and anaerobic parathion-degrading microbes, no carbon and hydrogen isotope fractionation of parathion were observed. For the first time, CSIA has been applied for the exclusive assessment of the hydrolysis of phosphorothioate-containing organophosphorus pesticides at a contaminated field site.

Beneficial Changes in Capsicum frutescens Due to Priming by Plant Probiotic Burkholderia spp

Plant probiotic mechanisms of endophytic microorganisms are highly remarkable as it play key role in growth and health of plants. Even though Burkholderia spp. have been studied for their role in plant growth and disease management, report on their field performance is very limited. Hence, the objective of the study was to investigate the plant probiotic performance of selected Burkholderia spp. on Capsicum frutescens. The results of the study showed bacterial influence on growth of C. frutescens with remarkable induction of early flowering and fruiting. Most interestingly, the plants treated with Burkholderia strains, ZoB74 and ZoB82 were found to have limited infestation with Bemisia tabaci. However, the control plants and those treated with Burkholderia ZoB86 were observed to have stunted growth with crumpled and curled leaves with no flowers or fruits. Hence, the study confirmed the strain specific potential of Burkholderia spp. in triggering the early flowering and fruiting in C. frutescens with associated protection from insect attack.

Impact of Saw Dust Application on the Distribution of Potentially Toxic Metals in Contaminated Soil

The need to develop an approach for the reclamation of contaminated site using locally available agricultural waste has been considered. The present study investigated the application of sawdust as an effective amendment in the immobilization of potentially toxic metals (PTMs) by conducting a greenhouse experiment on soil collected from an automobile dumpsite. The amended and non-amended soil samples were analyzed for their physicochemical parameters and sequential extraction of PTMs. The results revealed that application of amendment had positive impact on the physicochemical parameters as organic matter content and cation exchange capacity increased from 12.1% to 12.8% and 16.4 to 16.8 meq/100 g respectively. However, the mobility and bioavalability of these metals was reduced as they were found to be distributed mostly in the non-exchangeable phase of soil. Therefore, application of sawdust successfully immobilized PTMs and could be applied for future studies in agricultural soil reclamation.

Disolved organic matter (DOM) removal from bio-treated coking wastewate using a new polymeric adsorbent modified with dimethylamino groups

In the current study a new recyclable aminated hyper-cross-linked polymeric adsorbent (A-HPA) was prepared for effective removal of DOM from BTCW. Possibly benefited from its unique structure of polystyrene matrix, sufficient aminated groups and high specific surface area, A-HPA could remove DOM from BTCW through the synergetic effect of π-π interactions, acid-base interactions and micropore filling, and exhibited the highest removal efficiency than the other adsorbents. Moreover, the exhausted A-HPA was amenable to effective regeneration by using acid and alkaline solution, allowing for repeated use with a constant removal efficiency. Field application of continuous 3-year fixed-bed runs demonstrated that A-HPA is capable of effectively removing DOM from BTCW with no significant capacity loss, and the treated effluent can be partially used as recycled water in production. All the above results demonstrated that A-HPA adsoption could serve as a good choice for the advanced treatment of bio-treated sewage effluent.

Recent advances in ultrasonic treatment: Challenges and field applications for controlling harmful algal blooms (HABs)

Algal blooms are a naturally occurring phenomenon which can occur in both freshwater and saltwater. However, due to excess nutrient loading in water bodies (e.g. agricultural runoff and industrial activities), harmful algal blooms (HABs) have become an increasing issue globally, and can even cause health effects in humans due to the release of cyanotoxins. Among currently available treatment methods, sonication has received increasing attention for algal control because of its low impact on ecosystems and the environment. The effects of ultrasound on algal cells are well understood and operating parameter such as frequency, intensity, and duration of exposure has been well studied. However, most studies have been limited to laboratory data interpretation due to complicated environmental conditions in the field. Only a few field and pilot tests in small reservoirs were reported and the applicability of ultrasound for HABs prevention and control is still under question. There is a lack of information on the upscaling of ultrasonication devices for HAB control on larger water bodies, considering field influencing factors such as rainfall, light intensity/duration, temperature, water flow, nutrients loading, and turbidity. In this review article, we address the challenges and field considerations of ultrasonic applications for controlling algal blooms. An extensive literature survey, from the fundamentals of ultrasound techniques to recent ultrasound laboratory and field studies, has been thoroughly conducted and summarized to identify future technical expectations for field applications. Case studies investigating spatial distribution of frequency and pressure during sonication are highlighted with future implications.

Recombinase polymerase amplification combined with a lateral flow dipstick for rapid and visual detection of Schistosoma japonicum

BACKGROUND

With the continuous decline in prevalence and intensity of Schistosoma japonicum infection in China, more accurate and sensitive methods suitable for field detection become much needed for schistosomiasis control. Here, a novel rapid and visual detection method based on the combination of recombinase polymerase amplification (RPA) and lateral flow dipstick (LFD) was developed to detect S. japonicum DNA in fecal samples.

RESULTS

The LFD-RPA assay targeting SjR2 could detect 5 fg S. japonicum DNA, which was identical to qPCR and real-time RPA assay, and showed no cross-reaction with other parasites. The detection could be finished within 15-20 min at a wide temperature range (25-45 °C), and the results could be visualized by naked eye. The diagnostic validity of LFD-RPA assay was further assessed with 14 fecal samples of infected patients diagnosed by Kato-Katz method and 31 fecal samples of healthy persons, and compared with that of Enzyme-linked immunosorbent assay (ELSIA) and Indirect Hemagglutination Assay (IHA). The LFD-RPA assay showed 92.68 % sensitivity, 100 % specificity and excellent diagnostic agreement with the gold standard Kato-Katz test (k = 0.947, Z = 6.36, P < 0.001), whereas ELISA showed 85.71 % sensitivity, 93.55 % specificity, and substantial diagnostic agreement (k = 0.793, Z = 5.31, P < 0.001), and IHA showed 78.57 % sensitivity, 83.87 % specificity, and moderate diagnostic agreement (k = 0.600, Z = 4.05, P < 0.001), indicating that the LFD-RPA was much better than the traditional methods.

CONCLUSIONS

The LFD-RPA assay established by us is a sensitive, specific, rapid and convenient method for the diagnosis of schistosomiasis, and shows a great potency in field application.

In situ field application of electrokinetic remediation for an As-, Cu-, and Pb-contaminated rice paddy site using parallel electrode configuration

The applicability of an in situ electrokinetic process with a parallel electrode configuration was evaluated to treat an As-, Cu-, and Pb-contaminated paddy rice field in full scale (width, 17 m; length, 12.2 m; depth, 1.6 m). A constant voltage of 100 V was supplied and electrodes were spaced 2 m apart. Most As, Cu, and Pb were bound to Fe oxide and the major clay minerals in the test site were kaolinite and muscovite. The electrokinetic system removed 48.7, 48.9, and 54.5 % of As, Cu, and Pb, respectively, from the soil during 24 weeks. The removal of metals in the first layer (0-0.4 m) was higher than that in the other three layers because it was not influenced by groundwater fluctuation. Fractionation analysis showed that As and Pb bound to amorphous Fe and Al oxides decreased mainly, and energy consumption was 1.2 kWh/m(3). The standard deviation of metal concentration in the soil was much higher compared to the hexagonal electrode configuration because of a smaller electrical active area; however, the electrode configuration removed similar amounts of metals compared to the hexagonal system. From these results, it was concluded that the electrokinetic process could be effective at remediating As-, Cu-, and Pb-contaminated paddy rice field in situ.

Development of a versatile and stable internal control system for RT-qPCR assays

RT-qPCR, an established method for the detection of RNA viruses, requires internal RNA controls for the correct interpretation of PCR results. Robust and versatile RT-PCR controls can be achieved for example by packaging RNA into a virus-derived protein shell. In this study a MS2-based internal control system was developed, that allows stable and universal packing of different RNAs into non-infectious, non-lytic MS2-based viral like particles (VLPs). Two competitive internal controls for a hantavirus assay and a Crimean-Congo Hemorrhagic Fever Virus (CCHFV) assay were cloned for the expression of VLPs. The expression of VLPs containing the RNA of interest could be induced with arabinose in Escherichia coli. The VLPs proved to be temperature resistant and could be frozen and thawed several times without degradation. Distinction of IC RNA from the target RNA was facilitated by a clear shift in the melting temperature or by specific hybridization signals. Furthermore, target and IC PCR amplification could be easily distinguished by their size in gel-electrophoretic analyses. Limits of detection were determined, demonstrating that the application of the IC did not reduce the sensitivity of the target RT-qPCR reactions. The system can be adapted to nearly any required sequence, resulting in a highly flexible method with broad range applications.