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Poon EKW, Ninomiya K, Kageyama S, Guo X, Reimers B, Torii R, Dijkstra J, Bourantas CV, Reiber JHC, Barlis P, Onuma Y, Serruys PW. Two Facets of Shear Stress Post Drug Coating Balloon: Angiography Versus Optical Coherence Tomography Fusion Approach. Circ Cardiovasc Imaging 2024; 17:e016279. [PMID: 38516771 DOI: 10.1161/circimaging.123.016279] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 03/23/2024]
Affiliation(s)
- Eric K W Poon
- Department of Medicine, St Vincent's Hospital Melbourne Medical School, Faculty of Medicine, Dentistry, Health and Science(E.K.W.P., P.B.), University of Melbourne, Victoria, Australia
| | - Kai Ninomiya
- Department of Cardiology, University of Galway, Ireland (K.N., S.K., Y.O., P.W.S.)
| | - Shigetaka Kageyama
- Department of Cardiology, University of Galway, Ireland (K.N., S.K., Y.O., P.W.S.)
| | - Xiaojing Guo
- Department of Mechanical Engineering, Faculty of Engineering and Information Technology (X.G., P.W.S.), University of Melbourne, Victoria, Australia
| | - Bernhard Reimers
- Clinical and Interventional Cardiology, Cardiac Center, IRCCS (Istituti di Ricovero e Cura a Carattere Scientifico) Humanitas Research Hospital, Rozzano, Milan, Italy (B.R.)
| | - Ryo Torii
- Department of Mechanical Engineering, University College London, United Kingdom (R.T.)
| | - Jouke Dijkstra
- Department of Radiology, Leiden University Medical Center, the Netherlands (J.D., J.H.C.R.)
| | - Christos V Bourantas
- Device and Innovation Centre, William Harvey Research Institute, Queen Mary University London, United Kingdom (C.V.B.)
- Department of Cardiology, Barts Heart Centre, London, United Kingdom (C.V.B.)
| | - Johan H C Reiber
- Department of Radiology, Leiden University Medical Center, the Netherlands (J.D., J.H.C.R.)
| | - Peter Barlis
- Department of Medicine, St Vincent's Hospital Melbourne Medical School, Faculty of Medicine, Dentistry, Health and Science(E.K.W.P., P.B.), University of Melbourne, Victoria, Australia
| | - Yoshinobu Onuma
- Department of Cardiology, University of Galway, Ireland (K.N., S.K., Y.O., P.W.S.)
| | - Patrick W Serruys
- Department of Mechanical Engineering, Faculty of Engineering and Information Technology (X.G., P.W.S.), University of Melbourne, Victoria, Australia
- Department of Cardiology, University of Galway, Ireland (K.N., S.K., Y.O., P.W.S.)
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Gurgel M, Alvarez MA, Aristizabal JF, Baquero B, Gillot M, Al Turkestani N, Miranda F, Castillo AAD, Bianchi J, de Oliveira Ruellas AC, Ioshida M, Yatabe M, Rey D, Prieto J, Cevidanes L. Automated artificial intelligence-based three-dimensional comparison of orthodontic treatment outcomes with and without piezocision surgery. Orthod Craniofac Res 2024; 27:321-331. [PMID: 38009409 PMCID: PMC10949222 DOI: 10.1111/ocr.12737] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/25/2023] [Revised: 09/26/2023] [Accepted: 11/12/2023] [Indexed: 11/28/2023]
Abstract
OBJECTIVE(S) This study aims to evaluate the influence of the piezocision surgery in the orthodontic biomechanics, as well as in the magnitude and direction of tooth movement in the mandibular arch using novel artificial intelligence (AI)-automated tools. MATERIALS AND METHODS Nineteen patients, who had piezocision performed in the lower arch at the beginning of treatment with the goal of accelerating tooth movement, were compared to 19 patients who did not receive piezocision. Cone beam computed tomography (CBCT) and intraoral scans (IOS) were acquired before and after orthodontic treatment. AI-automated dental tools were used to segment and locate landmarks in dental crowns from IOS and root canals from CBCT scans to quantify 3D tooth movement. Differences in mesial-distal, buccolingual, intrusion and extrusion linear movements, as well as tooth long axis angulation and rotation were compared. RESULTS The treatment time for the control and experimental groups were 13.2 ± 5.06 and 13 ± 5.52 months respectively (P = .176). Overall, anterior and posterior tooth movement presented similar 3D linear and angular changes in the groups. The piezocision group demonstrated greater (P = .01) mesial long axis angulation of lower right first premolar (4.4 ± 6°) compared with control group (0.02 ± 4.9°), while the mesial rotation was significantly smaller (P = .008) in the experimental group (0.5 ± 7.8°) than in the control (8.5 ± 9.8°) considering the same tooth. CONCLUSION The open source-automated dental tools facilitated the clinicians' assessment of piezocision treatment outcomes. The piezocision surgery prior to the orthodontic treatment did not decrease the treatment time and did not influence in the orthodontic biomechanics, leading to similar tooth movements compared to conventional treatment.
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Affiliation(s)
- Marcela Gurgel
- Department of Orthodontics and Pediatric Dentistry, School of Dentistry, University of Michigan, Ann Arbor, Michigan, USA
| | | | | | - Baptiste Baquero
- Department of Orthodontics and Pediatric Dentistry, School of Dentistry, University of Michigan, Ann Arbor, Michigan, USA
| | - Maxime Gillot
- Department of Orthodontics and Pediatric Dentistry, School of Dentistry, University of Michigan, Ann Arbor, Michigan, USA
| | - Najla Al Turkestani
- Department of Orthodontics and Pediatric Dentistry, School of Dentistry, University of Michigan, Ann Arbor, Michigan, USA
| | - Felicia Miranda
- Department of Orthodontics and Pediatric Dentistry, School of Dentistry, University of Michigan, Ann Arbor, Michigan, USA
| | - Aron Aliaga-Del Castillo
- Department of Orthodontics and Pediatric Dentistry, School of Dentistry, University of Michigan, Ann Arbor, Michigan, USA
| | - Jonas Bianchi
- Department of Orthodontics and Pediatric Dentistry, School of Dentistry, University of Michigan, Ann Arbor, Michigan, USA
| | | | - Marcos Ioshida
- Department of Orthodontics and Pediatric Dentistry, School of Dentistry, University of Michigan, Ann Arbor, Michigan, USA
| | - Marilia Yatabe
- Department of Orthodontics and Pediatric Dentistry, School of Dentistry, University of Michigan, Ann Arbor, Michigan, USA
| | - Diego Rey
- Department of Orthodontics, CES University, Medellin, Colombia
| | - Juan Prieto
- Department of Computer Sciences, University of North Carolina, Chapel Hill, North Carolina, USA
| | - Lucia Cevidanes
- Department of Orthodontics and Pediatric Dentistry, School of Dentistry, University of Michigan, Ann Arbor, Michigan, USA
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Santisteban Espejo A, Bernal-Florindo I, Montero-Pavon P, Perez-Requena J, Atienza-Cuevas L, Villalba-Fernandez A, Garcia-Rojo M. Whole slide imaging of tumour microenvironment in classical Hodgkin's lymphoma: development of a clinical prediction model based on programmed death-ligand 1 and tumorous Reed-Sternberg cells. J Clin Pathol 2023:jcp-2023-209097. [PMID: 37977655 DOI: 10.1136/jcp-2023-209097] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/27/2023] [Accepted: 10/29/2023] [Indexed: 11/19/2023]
Abstract
AIMS The prognostic impact of programmed death-ligand 1 (PD-L1) cells in classic Hodgkin lymphoma (cHL) tumour microenvironment remains undefined. METHODS Model development via Transparent Reporting of a multivariable prediction model for Individual Prognosis Or Diagnosis guidelines were followed. PD-L1+ and CD30+ tumoral Reed-Sternberg cells were quantified through whole slide imaging and digital image analysis in 155 digital histopathological slides of cHL. Univariate and multivariate survival analyses were performed. The analyses were reproduced for patients with advanced stages (IIB, III and IV) using the Advanced-stage cHL International Prognostic Index. RESULTS The PD-L1/CD30 ratio was statistically significantly associated with survival outcomes. Patients with a PD-L1/CD30 ratio above 47.1 presented a shorter overall survival (mean OS: 53.7 months; 95% CI: 28.7 to 78.7) in comparison with patients below this threshold (mean OS: 105.4 months; 95% CI: 89.6 to 121.3) (p=0.04). When adjusted for covariates, the PD-L1/CD30 ratio retained prognostic impact, both for the OS (HR: 1.005; 95% CI: 1.002 to 1.008; p=0.000) and the progression-free survival (HR: 3.442; 95% CI: 1.045 to 11.340; p=0.04) in a clinical and histopathological multivariate model including the male sex (HR: 3.551; 95% CI: 0.986 to 12.786; p=0.05), a percentage of tumoral cells ≥10.1% (HR: 1.044; 95% CI: 1.003 to 1.087; p=0.03) and high risk International Prognostic Score (≥3 points) (HR: 6.453; 95% CI: 1.970 to 21.134; p=0.002). CONCLUSIONS The PD-L1/CD30 ratio identifies a group of cHL patients with an increased risk of treatment failure. Its clinical application can be performed as it constitutes an easy to implement pathological information in the diagnostic work-up of patients with cHL.
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Affiliation(s)
- Antonio Santisteban Espejo
- Department of Pathology, Puerta del Mar University Hospital, Cadiz, Spain
- Deparment of Medicine, Faculty of Medicine, University of Cadiz, Cadiz, Spain
- Institute of Research and Biomedical Innovation of Cadiz, INiBICA, Cadiz, Spain
| | - Irene Bernal-Florindo
- Institute of Research and Biomedical Innovation of Cadiz, INiBICA, Cadiz, Spain
- Department of Pathology, Jerez de la Frontera University Hospital, Jerez de la Frontera, Spain
| | - Pedro Montero-Pavon
- Department of Pathology, Jerez de la Frontera University Hospital, Jerez de la Frontera, Spain
| | - Jose Perez-Requena
- Department of Pathology, Puerta del Mar University Hospital, Cadiz, Spain
| | - Lidia Atienza-Cuevas
- Department of Pathology, Puerta del Mar University Hospital, Cadiz, Spain
- Institute of Research and Biomedical Innovation of Cadiz, INiBICA, Cadiz, Spain
| | | | - Marcial Garcia-Rojo
- Institute of Research and Biomedical Innovation of Cadiz, INiBICA, Cadiz, Spain
- Department of Pathology, Jerez de la Frontera University Hospital, Jerez de la Frontera, Spain
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Zheng T, Zheng S, Wang K, Quan H, Bai Q, Li S, Qi R, Zhao Y, Cui X, Gao X. Automatic CD30 scoring method for whole slide images of primary cutaneous CD30 + lymphoproliferative diseases. J Clin Pathol 2022; 76:jclinpath-2022-208344. [PMID: 35863885 DOI: 10.1136/jcp-2022-208344] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/18/2022] [Accepted: 07/07/2022] [Indexed: 11/03/2022]
Abstract
AIMS Deep-learning methods for scoring biomarkers are an active research topic. However, the superior performance of many studies relies on large datasets collected from clinical samples. In addition, there are fewer studies on immunohistochemical marker assessment for dermatological diseases. Accordingly, we developed a method for scoring CD30 based on convolutional neural networks for a few primary cutaneous CD30+ lymphoproliferative disorders and used this method to evaluate other biomarkers. METHODS A multipatch spatial attention mechanism and conditional random field algorithm were used to fully fuse tumour tissue characteristics on immunohistochemical slides and alleviate the few sample feature deficits. We trained and tested 28 CD30+ immunohistochemical whole slide images (WSIs), evaluated them with a performance index, and compared them with the diagnoses of senior dermatologists. Finally, the model's performance was further demonstrated on the publicly available Yale HER2 cohort. RESULTS Compared with the diagnoses by senior dermatologists, this method can better locate the tumour area and reduce the misdiagnosis rate. The prediction of CD3 and Ki-67 validated the model's ability to identify other biomarkers. CONCLUSIONS In this study, using a few immunohistochemical WSIs, our model can accurately identify CD30, CD3 and Ki-67 markers. In addition, the model could be applied to additional tumour identification tasks to aid pathologists in diagnosis and benefit clinical evaluation.
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Affiliation(s)
- Tingting Zheng
- College of Medicine and Biological Information Engineering, Northeastern University, Shenyang, Liaoning, China
| | - Song Zheng
- Department of Dermatology, The First Hospital of China Medical University, Shenyang, Liaoning, China
- National and Local Joint Engineering Research Center of Immunodermatological Theranostics No, Heping District, Liaoning Province, China
- NHC Key Laboratory of Immunodermatology, Heping District, Liaoning Province, China
| | - Ke Wang
- College of Medicine and Biological Information Engineering, Northeastern University, Shenyang, Liaoning, China
| | - Hao Quan
- College of Medicine and Biological Information Engineering, Northeastern University, Shenyang, Liaoning, China
| | - Qun Bai
- College of Medicine and Biological Information Engineering, Northeastern University, Shenyang, Liaoning, China
| | - Shuqin Li
- College of Medicine and Biological Information Engineering, Northeastern University, Shenyang, Liaoning, China
| | - Ruiqun Qi
- Department of Dermatology, The First Hospital of China Medical University, Shenyang, Liaoning, China
- National and Local Joint Engineering Research Center of Immunodermatological Theranostics No, Heping District, Liaoning Province, China
- NHC Key Laboratory of Immunodermatology, Heping District, Liaoning Province, China
| | - Yue Zhao
- College of Medicine and Biological Information Engineering, Northeastern University, Shenyang, Liaoning, China
- National and Local Joint Engineering Research Center of Immunodermatological Theranostics No, Heping District, Liaoning Province, China
| | - Xiaoyu Cui
- College of Medicine and Biological Information Engineering, Northeastern University, Shenyang, Liaoning, China
| | - Xinghua Gao
- Department of Dermatology, The First Hospital of China Medical University, Shenyang, Liaoning, China
- National and Local Joint Engineering Research Center of Immunodermatological Theranostics No, Heping District, Liaoning Province, China
- NHC Key Laboratory of Immunodermatology, Heping District, Liaoning Province, China
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Xu Y, Jiang L, Huang S, Liu Z, Zhang J. Dual resolution deep learning network with self-attention mechanism for classification and localisation of colorectal cancer in histopathological images. J Clin Pathol 2022:jclinpath-2021-208042. [PMID: 35273120 DOI: 10.1136/jclinpath-2021-208042] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/04/2021] [Accepted: 02/09/2022] [Indexed: 12/29/2022]
Abstract
AIMS Microscopic examination is a basic diagnostic technology for colorectal cancer (CRC), but it is very laborious. We developed a dual resolution deep learning network with self-attention mechanism (DRSANet) which combines context and details for CRC binary classification and localisation in whole slide images (WSIs), and as a computer-aided diagnosis (CAD) to improve the sensitivity and specificity of doctors' diagnosis. METHODS Representative regions of interest (ROI) of each tissue type were manually delineated in WSIs by pathologists. Based on the same coordinates of centre position, patches were extracted at different magnification levels from the ROI. Specifically, patches from low magnification level contain contextual information, while from high magnification level provide important details. A dual-inputs network was designed to learn context and details simultaneously, and self-attention mechanism was used to selectively learn different positions in the images to enhance the performance. RESULTS In classification task, DRSANet outperformed the benchmark networks which only depended on the high magnification patches on two test set. Furthermore, in localisation task, DRSANet demonstrated a better localisation capability of tumour area in WSI with less areas of misidentification. CONCLUSIONS We compared DRSANet with benchmark networks which only use the patches from high magnification level. Experimental results reveal that the performance of DRSANet is better than the benchmark networks. Both context and details should be considered in deep learning method.
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Affiliation(s)
- Yan Xu
- School of Information Engineering, Guangdong University of Technology, Guangzhou, China
| | - Liwen Jiang
- Department of Pathology, Affiliated Cancer Hospital & Institute of Guangzhou Medical University, Guangzhou, China
| | - Shuting Huang
- School of Information Engineering, Guangdong University of Technology, Guangzhou, China
| | - Zhenyu Liu
- School of Information Engineering, Guangdong University of Technology, Guangzhou, China
| | - Jiangyu Zhang
- Department of Pathology, Affiliated Cancer Hospital & Institute of Guangzhou Medical University, Guangzhou, China
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Jiang Z, Wang Y, Ding J, Yu S, Zhang J, Zhou H, Di J, Xing W. Susceptibility weighted imaging (SWI) for evaluating renal dysfunction in type 2 diabetes mellitus: a preliminary study using SWI parameters and SWI-based texture features. Ann Transl Med 2021; 8:1673. [PMID: 33490185 PMCID: PMC7812222 DOI: 10.21037/atm-20-7121] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
Background Susceptibility weighted imaging (SWI) could reflect tissue blood oxygen levels, and then whether it could be used to evaluate renal injury remains to be further studied. This study aimed to examine the performance of SWI parameters and SWI-based texture features in evaluating renal dysfunction of type 2 diabetes mellitus (T2DM). Methods Forty-five patients with T2DM were included. With the estimated glomerular filtration rate (eGFR), the patients were divided into non-moderate-severe renal injured group (non-msRI, eGFR >60 mL/min/1.73 m2) and moderate-severe renal injured group (msRI, eGFR ≤60 mL/min/1.73 m2). The 3 SWI parameters and 16 SWI-based texture features between non-msRI and msRI were compared. The correlation between the parameters and BUN, Scr was analyzed. Results The signal intensity ratio of the medulla to psoas muscle (MPswi) was significantly lower than the signal intensity ratio of the cortex to psoas muscle (CPswi) in non-msRI and msRI group (t=8.619, 3.483, respectively, P<0.05). MPswi was higher, and the signal intensity ratio of the cortex to the medulla (CMswi), Skewness, Correlation were lower in msRI than in non-msRI (P<0.05). These parameters showed similar diagnostic efficacies for msRI (P>0.05), and AUCs were 0.703–0.854. CMswi was an independent protective factor for msRI (OR =0.026, P=0.003). MPswi and CMswi were correlated with BUN (r=0.416, −0.545, P<0.05). CMswi and Correlation were correlated with Scr (r=−0.645, −0.411, P<0.05). Conclusions SWI was valuable for assessing renal dysfunction, which may be helpful for the evaluation of moderate-severe renal injured patients with T2DM.
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Affiliation(s)
- Zhenxing Jiang
- Department of Radiology, The Third Affiliated Hospital of Soochow University, Changzhou, China
| | - Yu Wang
- Department of Radiology, The Third Affiliated Hospital of Soochow University, Changzhou, China
| | - Jiule Ding
- Department of Radiology, The Third Affiliated Hospital of Soochow University, Changzhou, China
| | - Shengnan Yu
- Department of Radiology, The Third Affiliated Hospital of Soochow University, Changzhou, China
| | - Jinggang Zhang
- Department of Radiology, The Third Affiliated Hospital of Soochow University, Changzhou, China
| | - Hua Zhou
- Department of Nephrology, The Third Affiliated Hospital of Soochow University, Changzhou, China
| | - Jia Di
- Department of Nephrology, The Third Affiliated Hospital of Soochow University, Changzhou, China
| | - Wei Xing
- Department of Radiology, The Third Affiliated Hospital of Soochow University, Changzhou, China
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Rook A, John MM, Post A, Razavi M. Alcohol Ablation of Cardiac Tissues Quantified and Evaluated Using CIELAB Euclidean Distances. Tex Heart Inst J 2020; 47:265-270. [PMID: 33472218 DOI: 10.14503/thij-19-7140] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
Abstract
Ethanol solubilizes cell membranes, making it useful for various ablation applications. We examined the effect of time and alcohol type on the extent of ablation, quantified as Euclidean distances between color coordinates. We obtained biopsy punch samples (diameter, 6 mm) of left atrial appendage, atrial, ventricular, and septal tissue from porcine hearts and placed them in transwell plates filled with ethanol or methanol for 10, 20, 30, 40, 50, or 60 min. Control samples were taken for each time point. At each time point, samples were collected, cut transversely, and photographed. With use of a custom MATLAB program, all images were analyzed in the CIELAB color space, which is more perceptually uniform than the red-green-blue color space. Euclidean distances were calculated from CIELAB coordinates. The mean and standard error of these distances were analyzed. Two-way analysis of variance was used to test for differences among time points, and 2-tailed t tests, for differences between the alcohol datasets at each time point. Generally, Euclidean distances differed significantly between all time points, except for those immediately adjacent, and methanol produced larger Euclidean distances than ethanol did. Some tissue showed a plateauing effect, potentially indicating transmurality. Mean Euclidean distances effectively indexed alcohol ablation in cardiac tissue. Furthermore, we found that methanol ablated tissue more effectively than ethanol did. With ethanol, the extent of ablation for atrial tissue was largest at 60 min. We conclude that to achieve full transmurality in clinical applications, ethanol must remain in contact with atrial tissue for at least one hour.
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Affiliation(s)
- Ashley Rook
- Electrophysiology Clinical Research and Innovations, Texas Heart Institute, Houston, Texas 77030
| | - Mathews M John
- Electrophysiology Clinical Research and Innovations, Texas Heart Institute, Houston, Texas 77030
| | - Allison Post
- Electrophysiology Clinical Research and Innovations, Texas Heart Institute, Houston, Texas 77030
| | - Mehdi Razavi
- Electrophysiology Clinical Research and Innovations, Texas Heart Institute, Houston, Texas 77030
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Cimadamore A, Lopez-Beltran A, Scarpelli M, Cheng L, Montironi R. Digital pathology and COVID-19 and future crises: pathologists can safely diagnose cases from home using a consumer monitor and a mini PC. J Clin Pathol 2020; 73:695-696. [PMID: 32732339 DOI: 10.1136/jclinpath-2020-206943] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/13/2020] [Accepted: 07/16/2020] [Indexed: 12/20/2022]
Affiliation(s)
- Alessia Cimadamore
- Section of Pathological Anatomy, Polytechnic University of Marche Region, School of Medicine, United Hospitals, Ancona, Marche, Italy
| | - Antonio Lopez-Beltran
- Department of Surgery, Universidad de Cordoba Facultad de Medicina y Enfermeria, Cordoba, Spain
| | - Marina Scarpelli
- Section of Pathological Anatomy, Polytechnic University of Marche Region, School of Medicine, United Hospitals, Ancona, Marche, Italy
| | - Liang Cheng
- Department of Pathology and Laboratory Medicine, Indiana University School of Medicine, Indianapolis, Indiana, USA
| | - Rodolfo Montironi
- Section of Pathological Anatomy, Polytechnic University of Marche Region, School of Medicine, United Hospitals, Ancona, Marche, Italy
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Stathonikos N, van Varsseveld NC, Vink A, van Dijk MR, Nguyen TQ, Leng WWJD, Lacle MM, Goldschmeding R, Vreuls CPH, van Diest PJ. Digital pathology in the time of corona. J Clin Pathol 2020; 73:706-712. [PMID: 32699117 PMCID: PMC7588598 DOI: 10.1136/jclinpath-2020-206845] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/08/2020] [Accepted: 06/09/2020] [Indexed: 12/29/2022]
Abstract
The 2020 COVID-19 crisis has had and will have many implications for healthcare, including pathology. Rising number of infections create staffing shortages and other hospital departments might require pathology employees to fill more urgent positions. Furthermore, lockdown measures and social distancing cause many people to work from home. During this crisis, it became clearer than ever what an asset digital diagnostics is to keep pathologists, residents, molecular biologists and pathology assistants engaged in the diagnostic process, allowing social distancing and a ‘need to be there’ on-the-premises policy, while working effectively from home. This paper provides an overview of our way of working during the 2020 COVID-19 crisis with emphasis on the virtues of digital pathology.
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Affiliation(s)
| | | | - Aryan Vink
- Pathology, Universitair Medisch Centrum Utrecht, Utrecht, The Netherlands
| | - Marijke R van Dijk
- Pathology, Universitair Medisch Centrum Utrecht, Utrecht, The Netherlands
| | - Tri Q Nguyen
- Pathology, Universitair Medisch Centrum Utrecht, Utrecht, The Netherlands
| | - Wendy W J de Leng
- Pathology, Universitair Medisch Centrum Utrecht, Utrecht, The Netherlands
| | - Miangela M Lacle
- Pathology, Universitair Medisch Centrum Utrecht, Utrecht, The Netherlands
| | - Roel Goldschmeding
- Pathology, Universitair Medisch Centrum Utrecht, Utrecht, The Netherlands
| | - Celien P H Vreuls
- Pathology, Universitair Medisch Centrum Utrecht, Utrecht, The Netherlands
| | - Paul J van Diest
- Pathology, Universitair Medisch Centrum Utrecht, Utrecht, The Netherlands
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Mentink MG, Bakers FCH, Mihl C, Lahaye MJ, Rennenberg RJMW, Latten BGH, Kubat B, Hofman PAM. Introduction of postmortem CT increases the postmortem examination rate without negatively impacting the rate of traditional autopsy in daily practice: an implementation study. J Clin Pathol 2020; 74:177-181. [PMID: 32675309 DOI: 10.1136/jclinpath-2020-206734] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/08/2020] [Revised: 06/24/2020] [Accepted: 06/24/2020] [Indexed: 11/03/2022]
Abstract
AIM The aim of this implementation study was to assess the effect of postmortem CT (PMCT) and postmortem sampling (PMS) on (traditional) autopsy and postmortem examination rates. Additionally, the feasibility of PMCT and PMS in daily practice was assessed. METHODS For a period of 23 months, PMCT and PMS were used as additional modalities to the autopsy at the Department of Internal Medicine. The next of kin provided consent for 123 postmortem examinations. Autopsy rates were derived from the Dutch Pathology Registry, and postmortem examination rates were calculated for the period before, during and after the study period, and the exclusion rate, table time, time interval to informing the referring clinicians with results and the time interval to the Multidisciplinary Mortality Review Board (MMRB) meeting were objectified to assess the feasibility. RESULTS The postmortem examination rate increased (from 18.8% to 32.5%, p<0.001) without a decline in the autopsy rate. The autopsy rate did not change substantially after implementation (0.2% decrease). The exclusion rate was 2%, the table time was 23 min, and a median time interval of 4.1 hours between PMCT and discussing its results with the referring clinicians was observed. Additionally, more than 80% of the MMRB meetings were held within 8 weeks after the death of the patient. CONCLUSIONS Our study shows that the implementation of a multidisciplinary postmortem examination is feasible in daily practice and does not adversely affect the autopsy rate, while increasing the postmortem examination rate.
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Affiliation(s)
- Max G Mentink
- Department of Radiology and Nuclear Medicine, Maastricht Universitair Medisch Centrum+, Maastricht, The Netherlands
| | - Frans C H Bakers
- Department of Radiology and Nuclear Medicine, Maastricht Universitair Medisch Centrum+, Maastricht, The Netherlands
| | - Casper Mihl
- Department of Radiology and Nuclear Medicine, Maastricht Universitair Medisch Centrum+, Maastricht, The Netherlands.,Department of Radiology, CARIM School for Cardiovascular Diseases, Maastricht University, Maastricht, The Netherlands
| | - Max J Lahaye
- Department of Radiology, Antoni van Leeuwenhoek, Netherlands Cancer Institute, Amsterdam, The Netherlands
| | - Roger J M W Rennenberg
- Department of Internal Medicine, Maastricht Universitair Medisch Centrum+, Maastricht, The Netherlands
| | - Bart G H Latten
- Department of Pathology, Maastricht Universitair Medisch Centrum+, Maastricht, The Netherlands.,Department of Pathology, Netherlands Forensic Institute, Den Haag, The Netherlands
| | - Bela Kubat
- Department of Pathology, Maastricht Universitair Medisch Centrum+, Maastricht, The Netherlands.,Department of Pathology, Netherlands Forensic Institute, Den Haag, The Netherlands
| | - Paul A M Hofman
- Department of Radiology and Nuclear Medicine, Maastricht Universitair Medisch Centrum+, Maastricht, The Netherlands
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11
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Browning L, Colling R, Rakha E, Rajpoot N, Rittscher J, James JA, Salto-Tellez M, Snead DRJ, Verrill C. Digital pathology and artificial intelligence will be key to supporting clinical and academic cellular pathology through COVID-19 and future crises: the PathLAKE consortium perspective. J Clin Pathol 2020; 74:443-447. [PMID: 32620678 PMCID: PMC8223667 DOI: 10.1136/jclinpath-2020-206854] [Citation(s) in RCA: 36] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/11/2020] [Accepted: 06/15/2020] [Indexed: 12/19/2022]
Abstract
The measures to control the COVID-19 outbreak will likely remain a feature of our working lives until a suitable vaccine or treatment is found. The pandemic has had a substantial impact on clinical services, including cancer pathways. Pathologists are working remotely in many circumstances to protect themselves, colleagues, family members and the delivery of clinical services. The effects of COVID-19 on research and clinical trials have also been significant with changes to protocols, suspensions of studies and redeployment of resources to COVID-19. In this article, we explore the specific impact of COVID-19 on clinical and academic pathology and explore how digital pathology and artificial intelligence can play a key role to safeguarding clinical services and pathology-based research in the current climate and in the future.
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Affiliation(s)
- Lisa Browning
- Cellular Pathology, Oxford University Hospitals NHS Foundation Trust, Oxford, UK.,NIHR Oxford Biomedical Research Centre, Oxford, Oxfordshire, UK
| | - Richard Colling
- Nuffield Department of Surgical Sciences, Oxford University, Oxford, Oxfordshire, UK
| | - Emad Rakha
- School of Medicine, University of Nottingham, Nottingham, Nottinghamshire, UK
| | - Nasir Rajpoot
- Tissue Image Analytics Laboratory, Department of Computer Science, University of Warwick, Coventry, West Midlands, UK.,Department of Pathology, University Hospitals Coventry and Warwickshire NHS Trust, Coventry, West Midlands, UK
| | - Jens Rittscher
- NIHR Oxford Biomedical Research Centre, Oxford, Oxfordshire, UK.,Department of Engineering Science and Big Data Institute, Oxford University, Oxford, Oxfordshire, UK
| | - Jacqueline A James
- Precision Medicine Centre of Excellence, Patrick G Johnston Centre for Cancer Research, Queen's University Belfast, Belfast, Belfast, UK.,Cellular Pathology, Belfast Health and Social Care Trust, Belfast, Belfast, UK
| | - Manuel Salto-Tellez
- Precision Medicine Centre of Excellence, Patrick G Johnston Centre for Cancer Research, Queen's University Belfast, Belfast, Belfast, UK.,Cellular Pathology, Belfast Health and Social Care Trust, Belfast, Belfast, UK
| | - David R J Snead
- Department of Pathology, University Hospitals Coventry and Warwickshire NHS Trust, Coventry, West Midlands, UK
| | - Clare Verrill
- NIHR Oxford Biomedical Research Centre, Oxford, Oxfordshire, UK .,Nuffield Department of Surgical Sciences, Oxford University, Oxford, Oxfordshire, UK
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12
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Evans AJ, Vajpeyi R, Henry M, Chetty R. Establishment of a remote diagnostic histopathology service using whole slide imaging (digital pathology). J Clin Pathol 2020; 74:421-424. [PMID: 32611763 DOI: 10.1136/jclinpath-2020-206762] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/19/2020] [Accepted: 06/06/2020] [Indexed: 11/04/2022]
Abstract
BACKGROUND Whole slide imaging (WSI) has diverse applications in modern pathology practice, including providing histopathology services to remote locations. MATERIALS AND METHODS Utilising an existing contractual partnership with a Northern Ontario group of hospitals, the feasibility of using WSI for primary diagnostic services from Toronto was explored by the dedicated working group. All aspects explored from information technology (IT), laboratory information system (LIS) integration, scanning needs, laboratory workflow and pathologist needs and training, were taken into account in the developing the rationale and business case. RESULTS The financial outlay for a scanner was $CA180K (approximately £105.6 k) after discounts. There were no human resource requirements as staff were reorganised to cater for slide scanning. Additional IT/LIS costs were not incurred as existing connectivity was adapted to allow two site groups (gastrointestinal and skin) to pilot this study. Scanned slides were available for pathologist review 24-96 hours sooner than glass slides; there was a 2-day improvement for final authorised cases, and per annum savings were: $CA26 000 (£15.2 k) in courier costs, $CA60 000 (£35.2 k) travel and $CA45 000 (£26.4 k) in accommodation, meals and car rental expense. CONCLUSION WSI is a viable solution to provide timely, high-quality and cost efficient histopathology services to underserviced, remote areas.
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Affiliation(s)
| | | | - Michele Henry
- Department of Pathology, University Health Network Laboratory Medicine Program, University of Toronto, Toronto, Ontario, Canada
| | - Runjan Chetty
- Department of Pathology, University Health Network Laboratory Medicine Program, University of Toronto, Toronto, Ontario, Canada
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13
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Velankar P, Chaikriangkrai K, Dewal N, Bala SK, Elferjani B, Alchalabi S, Chang SM. Prognostic Performance of Prospective versus Retrospective Electrocardiographic Gating in Coronary Computed Tomographic Angiography. Tex Heart Inst J 2018; 45:214-220. [PMID: 30374228 DOI: 10.14503/thij-17-6270] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/21/2023]
Abstract
Coronary computed tomographic angiography (CCTA) with prospective electrocardiographic gating reduces radiation exposure, but its prognostic power for predicting cardiovascular risk in patients with suspected CAD has not been fully validated. To determine whether prospective gating performs as well as retrospective gating in this population, we compared these scan modes in patients undergoing 64-slice CCTA. From January 2009 through September 2011, 1,407 patients underwent CCTA; of these, 915 (mean age, 57.8 ± 13.5 yr; 54% male) had suspected coronary artery disease at the time of CCTA and were included in the study. Prospective gating was used in 195 (21%) and retrospective gating in 720 (79%). The mean follow-up duration was 2.4 ± 0.9 years. Overall, 390 patients (42.6%) had normal results on CCTA, 382 (41.7%) had nonobstructive coronary artery disease, and 143 (15.6%) had obstructive disease. Major adverse cardiac events occurred in 32 patients (3.5%): 11 cardiac deaths, 15 late revascularizations, and 6 nonfatal myocardial infarctions. Total event occurrences were similar in both groups (retrospective, 3.8%; prospective, 2.6%; P=0.42), as were the occurrences of each type of event. On adjusted multivariate analysis, nonobstructive (P=0.015) and obstructive (P <0.001) coronary artery disease were independently associated with major adverse cardiac events. Scan mode was not a predictor of outcome. The mean effective radiation dose was 4 ± 2 mSv for prospective compared with 12 ± 4 mSv for retrospective gating (P <0.01). The prognostic value of CCTA with prospective electrocardiographic gating compares favorably with that of retrospective gating, and it involves significantly less radiation exposure.
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14
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Wu YB, Wu B, Li Y, Hu XF, Si DL. [Development of Lung Compression Degree Measurement Software of Pneumothorax and Its Application in Forensic Medicine]. Fa Yi Xue Za Zhi 2018; 34:260-263. [PMID: 30051664 DOI: 10.12116/j.issn.1004-5619.2018.03.009] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Received: 09/26/2017] [Indexed: 11/30/2022]
Abstract
OBJECTIVES To develop a measurement software of lung compression degree to calculate the lung compression ratio in pneumothorax patients accurately and quickly, and then provide an objective assessment of damage degree in forensic clinical identification. METHODS A volume calculation software was established according to the working principle of the CT instrument. CT data of 15 pneumothorax patients were selected as research objects. The lung compression ratio of pneumothorax patient was calculated by the lung compression volume calculation software of the CT instrument. Meanwhile, the lung compression ratio was also calculated by the developed volume calculation software. The lung compression ratio and operation time calculated by the two methods were analyzed statistically. Scatter plot graphs were draw based on related data, and the developed volume calculation software was verified. RESULTS The difference between the lung compression ratios calculated by the two methods was not statistically significant, but showed a linear correlation (P<0.05). The operation time of the developed volume calculation software was obviously shorter. CONCLUSIONS The volume calculation software developed in this study can calculate the lung compression degree of pneumothorax more conveniently and rapidly with easy accessibility, which shows an application value in the forensic practice.
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Affiliation(s)
- Y B Wu
- Institute of Criminal Science and Technology, Shijiazhuang Public Security Bureau, Shijiazhuang 050021, China
| | - B Wu
- Institute of Criminal Science and Technology, Shijiazhuang Public Security Bureau, Shijiazhuang 050021, China
| | - Y Li
- Institute of Criminal Science and Technology, Shijiazhuang Public Security Bureau, Shijiazhuang 050021, China
| | - X F Hu
- Institute of Criminal Science and Technology, Shijiazhuang Public Security Bureau, Shijiazhuang 050021, China
| | - D L Si
- Department of CT/MRI, Third Hospital of Shijiazhuang, Shijiazhuang 050011, China
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15
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Burleson W, Lozano C, Ravishankar V, Lee J, Mahoney D. An Assistive Technology System that Provides Personalized Dressing Support for People Living with Dementia: Capability Study. JMIR Med Inform 2018; 6:e21. [PMID: 29716885 PMCID: PMC5954231 DOI: 10.2196/medinform.5587] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/01/2016] [Revised: 11/15/2016] [Accepted: 04/28/2017] [Indexed: 12/03/2022] Open
Abstract
Background Individuals living with advancing stages of dementia (persons with dementia, PWDs) or other cognitive disorders do not have the luxury of remembering how to perform basic day-to-day activities, which in turn makes them increasingly dependent on the assistance of caregivers. Dressing is one of the most common and stressful activities provided by caregivers because of its complexity and privacy challenges posed during the process. Objective In preparation for in-home trials with PWDs, the aim of this study was to develop and evaluate a prototype intelligent system, the DRESS prototype, to assess its ability to provide automated assistance with dressing that can afford independence and privacy to individual PWDs and potentially provide additional freedom to their caregivers (family members and professionals). Methods This laboratory study evaluated the DRESS prototype’s capacity to detect dressing events. These events were engaged in by 11 healthy participants simulating common correct and incorrect dressing scenarios. The events ranged from donning a shirt and pants inside out or backwards to partial dressing—typical issues that challenge a PWD and their caregivers. Results A set of expected detections for correct dressing was prepared via video analysis of all participants’ dressing behaviors. In the initial phases of donning either shirts or pants, the DRESS prototype missed only 4 out of 388 expected detections. The prototype’s ability to recognize other missing detections varied across conditions. There were also some unexpected detections such as detection of the inside of a shirt as it was being put on. Throughout the study, detection of dressing events was adversely affected by the relatively smaller effective size of the markers at greater distances. Although the DRESS prototype incorrectly identified 10 of 22 cases for shirts, the prototype preformed significantly better for pants, incorrectly identifying only 5 of 22 cases. Further analyses identified opportunities to improve the DRESS prototype’s reliability, including increasing the size of markers, minimizing garment folding or occlusions, and optimal positioning of participants with respect to the DRESS prototype. Conclusions This study demonstrates the ability to detect clothing orientation and position and infer current state of dressing using a combination of sensors, intelligent software, and barcode tracking. With improvements identified by this study, the DRESS prototype has the potential to provide a viable option to provide automated dressing support to assist PWDs in maintaining their independence and privacy, while potentially providing their caregivers with the much-needed respite.
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Affiliation(s)
- Winslow Burleson
- NYU-X, College of Nursing, New York University, New York, NY, United States
| | - Cecil Lozano
- Motivational Environments Research Group, School of Computing, Informatics, and Decision Systems Engineering, Arizona State University, Tempe, AZ, United States
| | - Vijay Ravishankar
- Motivational Environments Research Group, School of Computing, Informatics, and Decision Systems Engineering, Arizona State University, Tempe, AZ, United States
| | - Jisoo Lee
- Motivational Environments Research Group, School of Computing, Informatics, and Decision Systems Engineering, Arizona State University, Tempe, AZ, United States
| | - Diane Mahoney
- School of Nursing, MGH Institute of Health Professions, Charlestown, MA, United States
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16
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Sun J, Wang T, Li ZD, Shao Y, Zhang ZY, Feng H, Zou DH, Chen YJ. [Reconstruction of Vehicle-human Crash Accident and Injury Analysis Based on 3D Laser Scanning, Multi-rigid-body Reconstruction and Optimized Genetic Algorithm]. Fa Yi Xue Za Zhi 2018; 33:575-580. [PMID: 29441761 DOI: 10.3969/j.issn.1004-5619.2017.06.001] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Received: 08/23/2017] [Indexed: 11/18/2022]
Abstract
OBJECTIVES To reconstruct a vehicle-bicycle-cyclist crash accident and analyse the injuries using 3D laser scanning technology, multi-rigid-body dynamics and optimized genetic algorithm, and to provide biomechanical basis for the forensic identification of death cause. METHODS The vehicle was measured by 3D laser scanning technology. The multi-rigid-body models of cyclist, bicycle and vehicle were developed based on the measurements. The value range of optimal variables was set. A multi-objective genetic algorithm and the nondominated sorting genetic algorithm were used to find the optimal solutions, which were compared to the record of the surveillance video around the accident scene. RESULTS The reconstruction result of laser scanning on vehicle was satisfactory. In the optimal solutions found by optimization method of genetic algorithm, the dynamical behaviours of dummy, bicycle and vehicle corresponded to that recorded by the surveillance video. The injury parameters of dummy were consistent with the situation and position of the real injuries on the cyclist in accident. CONCLUSIONS The motion status before accident, damage process by crash and mechanical analysis on the injury of the victim can be reconstructed using 3D laser scanning technology, multi-rigid-body dynamics and optimized genetic algorithm, which have application value in the identification of injury manner and analysis of death cause in traffic accidents.
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Affiliation(s)
- J Sun
- Department of Forensic Medicine, Shanghai Medical College, Fudan University, Shanghai 200032, China.,Shanghai Key Laboratory of Forensic Medicine, Shanghai Forensic Service Platform, Academy of Forensic Science, Shanghai 200063, China
| | - T Wang
- Institute of Criminal Science and Technology, Songjiang Branch of Shanghai Public Security Bureau, Shanghai 201600, China
| | - Z D Li
- Shanghai Key Laboratory of Forensic Medicine, Shanghai Forensic Service Platform, Academy of Forensic Science, Shanghai 200063, China
| | - Y Shao
- Shanghai Key Laboratory of Forensic Medicine, Shanghai Forensic Service Platform, Academy of Forensic Science, Shanghai 200063, China
| | - Z Y Zhang
- Shanghai Key Laboratory of Forensic Medicine, Shanghai Forensic Service Platform, Academy of Forensic Science, Shanghai 200063, China
| | - H Feng
- Shanghai Key Laboratory of Forensic Medicine, Shanghai Forensic Service Platform, Academy of Forensic Science, Shanghai 200063, China
| | - D H Zou
- Shanghai Key Laboratory of Forensic Medicine, Shanghai Forensic Service Platform, Academy of Forensic Science, Shanghai 200063, China
| | - Y J Chen
- Shanghai Key Laboratory of Forensic Medicine, Shanghai Forensic Service Platform, Academy of Forensic Science, Shanghai 200063, China
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17
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Hu TH, Wan L, Liu TA, Wang MW, Chen T, Wang YH. [Advantages and Application Prospects of Deep Learning in Image Recognition and Bone Age Assessment]. Fa Yi Xue Za Zhi 2017; 33:629-634. [PMID: 29441773 DOI: 10.3969/j.issn.1004-5619.2017.06.013] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Received: 09/11/2017] [Indexed: 11/18/2022]
Abstract
Deep learning and neural network models have been new research directions and hot issues in the fields of machine learning and artificial intelligence in recent years. Deep learning has made a breakthrough in the applications of image and speech recognitions, and also has been extensively used in the fields of face recognition and information retrieval because of its special superiority. Bone X-ray images express different variations in black-white-gray gradations, which have image features of black and white contrasts and level differences. Based on these advantages of deep learning in image recognition, we combine it with the research of bone age assessment to provide basic datum for constructing a forensic automatic system of bone age assessment. This paper reviews the basic concept and network architectures of deep learning, and describes its recent research progress on image recognition in different research fields at home and abroad, and explores its advantages and application prospects in bone age assessment.
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Affiliation(s)
- T H Hu
- Department of Forensic Science, Xi'an Jiaotong University Health Science Center, Xi'an 710061, China.,Shanghai Key Laboratory of Forensic Medicine, Shanghai Forensic Service Platform, Academy of Forensic Science, Shanghai 200063, China
| | - L Wan
- Shanghai Key Laboratory of Forensic Medicine, Shanghai Forensic Service Platform, Academy of Forensic Science, Shanghai 200063, China
| | - T A Liu
- Shanghai Fanyang Information Technology Co., LTD., Shanghai 200444, China
| | - M W Wang
- Shanghai Key Laboratory of Forensic Medicine, Shanghai Forensic Service Platform, Academy of Forensic Science, Shanghai 200063, China
| | - T Chen
- Department of Forensic Science, Xi'an Jiaotong University Health Science Center, Xi'an 710061, China
| | - Y H Wang
- Shanghai Key Laboratory of Forensic Medicine, Shanghai Forensic Service Platform, Academy of Forensic Science, Shanghai 200063, China
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18
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Tyan M, Espinoza-Cuadros F, Fernández Pozo R, Toledano D, Lopez Gonzalo E, Alcazar Ramirez JD, Hernandez Gomez LA. Obstructive Sleep Apnea in Women: Study of Speech and Craniofacial Characteristics. JMIR Mhealth Uhealth 2017; 5:e169. [PMID: 29109068 PMCID: PMC5696580 DOI: 10.2196/mhealth.8238] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/19/2017] [Revised: 09/14/2017] [Accepted: 09/21/2017] [Indexed: 01/26/2023] Open
Abstract
Background Obstructive sleep apnea (OSA) is a common sleep disorder characterized by frequent cessation of breathing lasting 10 seconds or longer. The diagnosis of OSA is performed through an expensive procedure, which requires an overnight stay at the hospital. This has led to several proposals based on the analysis of patients’ facial images and speech recordings as an attempt to develop simpler and cheaper methods to diagnose OSA. Objective The objective of this study was to analyze possible relationships between OSA and speech and facial features on a female population and whether these possible connections may be affected by the specific clinical characteristics in OSA population and, more specifically, to explore how the connection between OSA and speech and facial features can be affected by gender. Methods All the subjects are Spanish subjects suspected to suffer from OSA and referred to a sleep disorders unit. Voice recordings and photographs were collected in a supervised but not highly controlled way, trying to test a scenario close to a realistic clinical practice scenario where OSA is assessed using an app running on a mobile device. Furthermore, clinical variables such as weight, height, age, and cervical perimeter, which are usually reported as predictors of OSA, were also gathered. Acoustic analysis is centered in sustained vowels. Facial analysis consists of a set of local craniofacial features related to OSA, which were extracted from images after detecting facial landmarks by using the active appearance models. To study the probable OSA connection with speech and craniofacial features, correlations among apnea-hypopnea index (AHI), clinical variables, and acoustic and facial measurements were analyzed. Results The results obtained for female population indicate mainly weak correlations (r values between .20 and .39). Correlations between AHI, clinical variables, and speech features show the prevalence of formant frequencies over bandwidths, with F2/i/ being the most appropriate formant frequency for OSA prediction in women. Results obtained for male population indicate mainly very weak correlations (r values between .01 and .19). In this case, bandwidths prevail over formant frequencies. Correlations between AHI, clinical variables, and craniofacial measurements are very weak. Conclusions In accordance with previous studies, some clinical variables are found to be good predictors of OSA. Besides, strong correlations are found between AHI and some clinical variables with speech and facial features. Regarding speech feature, the results show the prevalence of formant frequency F2/i/ over the rest of features for the female population as OSA predictive feature. Although the correlation reported is weak, this study aims to find some traces that could explain the possible connection between OSA and speech in women. In the case of craniofacial measurements, results evidence that some features that can be used for predicting OSA in male patients are not suitable for testing female population.
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Affiliation(s)
- Marina Tyan
- Signal Processing Applications Group, Signal, Systems and Radiocommunications Department, Universidad Politécnica de Madrid, Madrid, Spain
| | - Fernando Espinoza-Cuadros
- Signal Processing Applications Group, Signal, Systems and Radiocommunications Department, Universidad Politécnica de Madrid, Madrid, Spain
| | - Rubén Fernández Pozo
- Signal Processing Applications Group, Signal, Systems and Radiocommunications Department, Universidad Politécnica de Madrid, Madrid, Spain
| | - Doroteo Toledano
- Audio, Data Intelligence and Speech Group, Universidad Autónoma de Madrid, Madrid, Spain
| | - Eduardo Lopez Gonzalo
- Signal Processing Applications Group, Signal, Systems and Radiocommunications Department, Universidad Politécnica de Madrid, Madrid, Spain
| | | | - Luis Alfonso Hernandez Gomez
- Signal Processing Applications Group, Signal, Systems and Radiocommunications Department, Universidad Politécnica de Madrid, Madrid, Spain
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Blauwblomme T, Kahane P, Minotti L, Grouiller F, Krainik A, Vercueil L, Chabardès S, Hoffmann D, David O. Multimodal imaging reveals the role of γ activity in eating-reflex seizures. J Neurol Neurosurg Psychiatry 2011; 82:1171-3. [PMID: 21097547 PMCID: PMC3338065 DOI: 10.1136/jnnp.2010.212696] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
Abstract
In reflex epilepsies, alteration of γ oscillations may mediate transition between interictal and ictal states. Here, we explored a patient having seizures triggered by syrup intake. From intracranial electroencephalography combined with functional MRI, the overlap of the gustatory cortex and of the preictal and ictal onset zones, as defined by early gamma changes, motivated the successful resective surgery of the middle short gyrus of the right insula. This case provides a rare demonstration from human gamma activity that the route to seizure may be supported by the interplay between physiological and epileptogenic networks.
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20
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Abstract
While medical imaging typically provides massive amounts of data, the extraction of relevant information for predictive diagnosis remains a difficult challenge. Functional magnetic resonance imaging (fMRI) data, that provide an indirect measure of task-related or spontaneous neuronal activity, are classically analyzed in a mass-univariate procedure yielding statistical parametric maps. This analysis framework disregards some important principles of brain organization: population coding, distributed and overlapping representations. Multivariate pattern analysis, i.e., the prediction of behavioral variables from brain activation patterns better captures this structure. To cope with the high dimensionality of the data, the learning method has to be regularized. However, the spatial structure of the image is not taken into account in standard regularization methods, so that the extracted features are often hard to interpret. More informative and interpretable results can be obtained with the l(1) norm of the image gradient, also known as its total variation (TV), as regularization. We apply for the first time this method to fMRI data, and show that TV regularization is well suited to the purpose of brain mapping while being a powerful tool for brain decoding. Moreover, this article presents the first use of TV regularization for classification.
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Affiliation(s)
- Vincent Michel
- INRIA, Saclay-Ile-de-France, Parietal team, France-CEA/DSV/I2BM/Neurospin/LNAO, Saclay, France.
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21
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Hsieh YC, Tsai IC, Tsao CR, Lin TC, Ting CT, Wu TJ. Spontaneous remission of ruptured intramyocardial hematoma detected upon serial multidetector computed tomography. Tex Heart Inst J 2010; 37:350-353. [PMID: 20548821 PMCID: PMC2879207] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/29/2023]
Abstract
Intramyocardial hematoma is a rare sequela of percutaneous coronary intervention after acute myocardial infarction. Clinical outcomes of intramyocardial hematoma vary from asymptomatic remission to cardiac death. Close follow-up is imperative. Herein, we report the case of a 69-year-old man who had sustained an acute inferior myocardial infarction. During primary percutaneous coronary intervention to the occluded right coronary artery, an intramyocardial hematoma developed and immediately ruptured into the right ventricle. Because the patient remained hemodynamically stable, a conservative approach was taken. Follow-up with serial multidetector computed tomographic imaging elucidated the course and extent of the hematoma and clearly revealed the healing process. After 1 year, this method of imaging showed complete remission of the hematoma. To the best of our knowledge, this is the 1st use of serial multidetector computed tomography to document the remission of an intramyocardial hematoma that ruptured after complicated percutaneous coronary intervention. We believe that multidetector computed tomography is useful in tracing the natural history of intramyocardial hematomas.
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Affiliation(s)
- Yu-Cheng Hsieh
- Cardiovascular Center, Taichung Veterans General Hospital, Taichung 40705, Taiwan
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Hatt M, Cheze le Rest C, Turzo A, Roux C, Visvikis D. A fuzzy locally adaptive Bayesian segmentation approach for volume determination in PET. IEEE Trans Med Imaging 2009; 28:881-93. [PMID: 19150782 PMCID: PMC2912931 DOI: 10.1109/tmi.2008.2012036] [Citation(s) in RCA: 203] [Impact Index Per Article: 13.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/04/2023]
Abstract
Accurate volume estimation in positron emission tomography (PET) is crucial for different oncology applications. The objective of our study was to develop a new fuzzy locally adaptive Bayesian (FLAB) segmentation for automatic lesion volume delineation. FLAB was compared with a threshold approach as well as the previously proposed fuzzy hidden Markov chains (FHMC) and the fuzzy C-Means (FCM) algorithms. The performance of the algorithms was assessed on acquired datasets of the IEC phantom, covering a range of spherical lesion sizes (10-37 mm), contrast ratios (4:1 and 8:1), noise levels (1, 2, and 5 min acquisitions), and voxel sizes (8 and 64 mm(3)). In addition, the performance of the FLAB model was assessed on realistic nonuniform and nonspherical volumes simulated from patient lesions. Results show that FLAB performs better than the other methodologies, particularly for smaller objects. The volume error was 5%-15% for the different sphere sizes (down to 13 mm), contrast and image qualities considered, with a high reproducibility (variation < 4%). By comparison, the thresholding results were greatly dependent on image contrast and noise, whereas FCM results were less dependent on noise but consistently failed to segment lesions < 2 cm. In addition, FLAB performed consistently better for lesions < 2 cm in comparison to the FHMC algorithm. Finally the FLAB model provided errors less than 10% for nonspherical lesions with inhomogeneous activity distributions. Future developments will concentrate on an extension of FLAB in order to allow the segmentation of separate activity distribution regions within the same functional volume as well as a robustness study with respect to different scanners and reconstruction algorithms.
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23
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Zheng M, Li J, Xu J, Chen K, Zhao H, Huan Y. Dual-source computed tomographic coronary angiography: image quality and stenosis diagnosis in patients with high heart rates. Tex Heart Inst J 2009; 36:117-124. [PMID: 19436804 PMCID: PMC2676587] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/27/2023]
Abstract
We sought to evaluate prospectively the effects of heart rate and heart-rate variability on dual-source computed tomographic coronary image quality in patients whose heart rates were high, and to determine retrospectively the accuracy of dual-source computed tomographic diagnosis of coronary artery stenosis in the same patients.We compared image quality and diagnostic accuracy in 40 patients whose heart rates exceeded 70 beats/min with the same data in 40 patients whose heart rates were 70 beats/min or slower. In both groups, we analyzed 1,133 coronary arterial segments. Five hundred forty-five segments (97.7%) in low-heart-rate patients and 539 segments (93.7%) in high-heart-rate patients were of diagnostic image quality. We considered P < 0.05 to be statistically significant. No statistically significant differences between the groups were found in diagnostic-image quality scores of total segments or of any coronary artery, nor were any significant differences found between the groups in the accurate diagnosis of angiographically significant stenosis.Calcification was the chief factor that affected diagnostic accuracy. In high-heart-rate patients, heart-rate variability was significantly related to the diagnostic image quality of all segments (P = 0.001) and of the left circumflex coronary artery (P = 0.016). Heart-rate variability of more than 5 beats/min most strongly contributed to an inability to evaluate segments in both groups. When heart rates rose, the optimal reconstruction window shifted from diastole to systole.The image quality of dual-source computed tomographic coronary angiography at high heart rates enables sufficient diagnosis of stenosis, although variability of heart rates significantly deteriorates image quality.
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Affiliation(s)
- Minwen Zheng
- Department of Radiology, Xijing Hospital, Xi'an 710032, Shaanxi Province, People's Republic of China
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Perret P, Slimani L, Briat A, Villemain D, Halimi S, Demongeot J, Fagret D, Ghezzi C. Assessment of insulin resistance in fructose-fed rats with 125I-6-deoxy-6-iodo-D-glucose, a new tracer of glucose transport. Eur J Nucl Med Mol Imaging 2007; 34:734-744. [PMID: 17171359 PMCID: PMC2705461 DOI: 10.1007/s00259-006-0267-3] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/08/2006] [Accepted: 08/08/2006] [Indexed: 12/28/2022]
Abstract
PURPOSE Insulin resistance, characterised by an insulin-stimulated glucose transport defect, is an important feature of the pre-diabetic state that has been observed in numerous pathological disorders. The purpose of this study was to assess variations in glucose transport in rats using (125)I-6-deoxy-6-iodo-D-glucose (6DIG), a new tracer of glucose transport proposed as an imaging tool to assess insulin resistance in vivo. METHODS Two protocols were performed, a hyperinsulinaemic-euglycaemic clamp and a normoinsulinaemic-normoglycaemic protocol, in awake control and insulin-resistant fructose-fed rats. The tracer was injected at steady state, and activity in 11 tissues and the blood was assessed ex vivo at several time points. A multicompartmental mathematical model was developed to obtain fractional transfer coefficients of 6DIG from the blood to the organs. RESULTS Insulin sensitivity of fructose-fed rats, estimated by the glucose infusion rate, was reduced by 40% compared with control rats. At steady state, 6DIG uptake was significantly stimulated by insulin in insulin-sensitive tissues of control rats (basal versus insulin: diaphragm, p < 0.01; muscle, p<0.05; heart, p<0.001), whereas insulin did not stimulate 6DIG uptake in insulin-resistant fructose-fed rats. Moreover, in these tissues, the fractional transfer coefficients of entrance were significantly increased with insulin in control rats (basal vs insulin: diaphragm, p<0.001; muscle, p<0.001; heart, p<0.01) whereas no significant changes were observed in fructose-fed rats. CONCLUSION This study sets the stage for the future use of 6DIG as a non-invasive means for the evaluation of insulin resistance by nuclear imaging.
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Affiliation(s)
- Pascale Perret
- INSERM, E340, 38000 Grenoble,, France.
- Univ Grenoble, 38000 Grenoble,, France.
| | - Lotfi Slimani
- INSERM, E340, 38000 Grenoble,, France
- Univ Grenoble, 38000 Grenoble,, France
| | - Arnaud Briat
- INSERM, E340, 38000 Grenoble,, France
- Univ Grenoble, 38000 Grenoble,, France
| | - Danièle Villemain
- INSERM, E340, 38000 Grenoble,, France
- Univ Grenoble, 38000 Grenoble,, France
| | - Serge Halimi
- CHRU Grenoble, Hôpital Michallon, Service de Diabétologie, , 38000 Grenoble,, France
| | - Jacques Demongeot
- Univ Grenoble, 38000 Grenoble,, France
- CNRS, UMR 5525, 38000 Grenoble, , France
| | - Daniel Fagret
- INSERM, E340, 38000 Grenoble,, France
- Univ Grenoble, 38000 Grenoble,, France
| | - Catherine Ghezzi
- INSERM, E340, 38000 Grenoble,, France
- Univ Grenoble, 38000 Grenoble,, France
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Duran C, Sagbas E, Caynak B, Sanisoglu I, Akpinar B, Gulbaran M. Multislice computed tomography accurately detects stenosis in coronary artery bypass conduits. Tex Heart Inst J 2007; 34:296-300. [PMID: 17948078 PMCID: PMC1995059] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/25/2023]
Abstract
The aim of this study was to evaluate the accuracy of multislice computed tomography in detecting graft stenosis or occlusion after coronary artery bypass grafting, using coronary angiography as the standard. From January 2005 through May 2006, 25 patients (19 men and 6 women; mean age, 54 +/- 11.3 years) underwent diagnostic investigation of their bypass grafts by multislice computed tomography within 1 month of coronary angiography. The mean time elapsed after coronary artery bypass grafting was 6.2 years. In these 25 patients, we examined 65 bypass conduits (24 arterial and 41 venous) and 171 graft segments (the shaft, proximal anastomosis, and distal anastomosis). Compared with coronary angiography, the segment-based sensitivity, specificity, and positive and negative predictive values of multislice computed tomography in the evaluation of stenosis were 89%, 100%, 100%, and 99%, respectively. The patency rate for multislice computed tomography was 85% (55/65: 3 arterial and 7 venous grafts were occluded), with 100% sensitivity and specificity. From these data, we conclude that multislice computed tomography can accurately evaluate the patency and stenosis of bypass grafts during outpatient follow-up.
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Affiliation(s)
- Cihan Duran
- Department of Radiology, Florence Nightingale Hospital, Sisli, Istanbul 80220, Turkey
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Zhu H, Shu H, Zhou J, Toumoulin C, Luo L. Image reconstruction for positron emission tomography using fuzzy nonlinear anisotropic diffusion penalty. Med Biol Eng Comput 2006; 44:983-97. [PMID: 17061117 PMCID: PMC2235198 DOI: 10.1007/s11517-006-0115-4] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/21/2006] [Accepted: 09/26/2006] [Indexed: 10/24/2022]
Abstract
Iterative algorithms such as maximum likelihood-expectation maximization (ML-EM) become the standard for the reconstruction in emission computed tomography. However, such algorithms are sensitive to noise artifacts so that the reconstruction begins to degrade when the number of iterations reaches a certain value. In this paper, we have investigated a new iterative algorithm for penalized-likelihood image reconstruction that uses the fuzzy nonlinear anisotropic diffusion (AD) as a penalty function. The proposed algorithm does not suffer from the same problem as that of ML-EM algorithm, and it converges to a low noisy solution even if the iteration number is high. The fuzzy reasoning instead of a nonnegative monotonically decreasing function was used to calculate the diffusion coefficients which control the whole diffusion. Thus, the diffusion strength is controlled by fuzzy rules expressed in a linguistic form. The proposed method makes use of the advantages of fuzzy set theory in dealing with uncertain problems and nonlinear AD techniques in removing the noise as well as preserving the edges. Quantitative analysis shows that the proposed reconstruction algorithm is suitable to produce better reconstructed images when compared with ML-EM, ordered subsets EM (OS-EM), Gaussian-MAP, MRP, TV-EM reconstructed images.
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Affiliation(s)
- Hongqing Zhu
- Laboratory of Image Science and Technology, Department of Computer Science and Engineering, Southeast University, Nanjing, People's Republic of China.
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Dojat M, Piettre L, Delon-Martin C, Pachot-Clouard M, Segebarth C, Knoblauch K. Global integration of local color differences in transparency perception: An fMRI study. Vis Neurosci 2006; 23:357-64. [PMID: 16961967 PMCID: PMC2064862 DOI: 10.1017/s0952523806233200] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2005] [Accepted: 12/28/2005] [Indexed: 11/07/2022]
Abstract
In normal viewing, the visual system effortlessly assigns approximately constant attributes of color and shape to perceived objects. A fundamental component of this process is the compensation for illuminant variations and intervening media to recover reflectance properties of natural surfaces. We exploited the phenomenon of transparency perception to explore the cortical regions implicated in such processes, using fMRI. By manipulating the coherence of local color differences around a region in an image, we interfered with their global perceptual integration and thereby modified whether the region appeared transparent or not. We found the major cortical activation due to global integration of local color differences to be in the anterior part of the parahippocampal gyrus. Regions differentially activated by chromatic versus achromatic geometric patterns showed no significant differential response related to the coherence/incoherence of local color differences. The results link the integration of local color differences in the extraction of a transparent layer with sites activated by object-related properties of an image.
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Affiliation(s)
- Michel Dojat
- Neuroimagerie Fonctionnelle et Metabolique
INSERM : U594Université Joseph-Fourier - Grenoble ICentre Hospitalier Universitaire
38043 GRENOBLE CEDEX 9,FR
| | - Loÿs Piettre
- Neuroimagerie Fonctionnelle et Metabolique
INSERM : U594Université Joseph-Fourier - Grenoble ICentre Hospitalier Universitaire
38043 GRENOBLE CEDEX 9,FR
| | - Chantal Delon-Martin
- Neuroimagerie Fonctionnelle et Metabolique
INSERM : U594Université Joseph-Fourier - Grenoble ICentre Hospitalier Universitaire
38043 GRENOBLE CEDEX 9,FR
| | - Mathilde Pachot-Clouard
- Neuroimagerie Fonctionnelle et Metabolique
INSERM : U594Université Joseph-Fourier - Grenoble ICentre Hospitalier Universitaire
38043 GRENOBLE CEDEX 9,FR
| | - Christoph Segebarth
- Neuroimagerie Fonctionnelle et Metabolique
INSERM : U594Université Joseph-Fourier - Grenoble ICentre Hospitalier Universitaire
38043 GRENOBLE CEDEX 9,FR
| | - Kenneth Knoblauch
- Cerveau et vision
INSERM : U371 INRA IFR19Université Claude Bernard - Lyon ICentre de Recherche Inserm
18, Avenue du Doyen Lepine
69675 BRON CEDEX,FR
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Serrai H, Senhadji L. Acquisition time reduction in magnetic resonance spectroscopic imaging using discrete wavelet encoding. J Magn Reson 2005; 177:22-30. [PMID: 16098778 PMCID: PMC2094216 DOI: 10.1016/j.jmr.2005.07.006] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/08/2005] [Revised: 07/06/2005] [Accepted: 07/12/2005] [Indexed: 05/04/2023]
Abstract
This paper describes a new magnetic resonance spectroscopic imaging (MRSI) technique based upon the discrete wavelet transform to reduce acquisition time and cross voxel contamination. Prototype functions called wavelets are used in wavelet encoding to localize defined regions in localized space by dilations and translations. Wavelet encoding in MRSI is achieved by matching the slice selective RF pulse profiles to a set of dilated and translated wavelets. Single and dual band slice selective excitation and refocusing pulses, with profiles resembling Haar wavelets, are used in a spin-echo sequence to acquire 2D-MRSI wavelet encoding data. The 2D space region is spanned up to the desired resolution by a proportional number of dilations (increases in the localization gradients) and translations (frequency shift) of the Haar wavelets (RF pulses). Acquisition time is reduced by acquiring successive MR signals from regions of space with variable size and different locations with no requirement for a TR waiting time between acquisitions. An inverse wavelet transform is performed on the data to produce the correct spatial MR signal distribution.
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Affiliation(s)
- Hacene Serrai
- Institute for Biodiagnostics, National Research Council, Winnipeg, MB, Canada.
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Grova C, Jannin P, Buvat I, Benali H, Bansard JY, Biraben A, Gibaud B. From anatomic standardization analysis of perfusion SPECT data to perfusion pattern modeling: evidence of functional networks in healthy subjects and temporal lobe epilepsy patients. Acad Radiol 2005; 12:554-65. [PMID: 15866127 PMCID: PMC1978216 DOI: 10.1016/j.acra.2004.08.014] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/24/2004] [Accepted: 08/17/2004] [Indexed: 10/25/2022]
Abstract
RATIONALE AND OBJECTIVES In the general context of perfusion pattern modeling from single-photon emission computed tomographic (SPECT) data, the purpose of this study is to characterize interindividual functional variability and functional connectivity between anatomic structures in a set of SPECT data acquired from a homogeneous population of subjects. MATERIALS AND METHODS From volume of interest (VOI)-perfusion measurements performed on anatomically standardized SPECT data, we proposed to use correspondence analysis (CA) and hierarchical clustering (HC) to explore the structure of statistical dependencies among these measurements. The method was applied to study the perfusion pattern in two populations of subjects; namely, SPECT data from 27 healthy subjects and ictal SPECT data from 10 patients with mesio-temporal lobe epilepsy (MTLE). RESULTS For healthy subjects, anatomic structures showing statistically dependent perfusion patterns were classified into four groups; namely, temporomesial structures, internal structures, posterior structures, and remaining cortex. For patients with MTLE, they were classified as temporomesial structures, surrounding temporal structures, internal structures, and remaining cortex. Anatomic structures of each group showed similar perfusion behavior so that they may be functionally connected and may belong to the same network. Our main result is that the temporal pole and lenticular nucleus seemed to be highly relevant to characterize ictal perfusion in patients with MTLE. This exploratory analysis suggests that a network involving temporal structures, lenticular nucleus, brainstem, and cerebellum seems to be involved during MTLE seizures. CONCLUSION CA followed by HC is a promising approach to explore brain perfusion patterns from SPECT VOI measurements.
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Affiliation(s)
- Christophe Grova
- Integration de Donnees Multimedia en Anatomie et Physiologie Cerebrale Pour l'Aide a la Decision et l'Enseignement
INSERM : ERI1Université Rennes IFaculte de Medecine
2, Av du Professeur Leon Bernard
35043 RENNES CEDEX,FR
- Montreal Neurological Institute
McGill UniversityMontreal
Canada,CA
| | - Pierre Jannin
- Integration de Donnees Multimedia en Anatomie et Physiologie Cerebrale Pour l'Aide a la Decision et l'Enseignement
INSERM : ERI1Université Rennes IFaculte de Medecine
2, Av du Professeur Leon Bernard
35043 RENNES CEDEX,FR
| | - Irène Buvat
- Imagerie médicale et quantitative
INSERM : U494CHU Pitié Salpétrière
91 bd de l'Hopital
75634 Paris CEDEX 13,FR
| | - Habib Benali
- Imagerie médicale et quantitative
INSERM : U494CHU Pitié Salpétrière
91 bd de l'Hopital
75634 Paris CEDEX 13,FR
| | - Jean-Yves Bansard
- Laboratoire Traitement du Signal et de l'Image
INSERM : U642Université Rennes ILTSI, Campus de Beaulieu,
Université de Rennes 1,
263 Avenue du Général Leclerc - CS 74205 - 35042 Rennes Cedex,FR
| | - Arnaud Biraben
- Integration de Donnees Multimedia en Anatomie et Physiologie Cerebrale Pour l'Aide a la Decision et l'Enseignement
INSERM : ERI1Université Rennes IFaculte de Medecine
2, Av du Professeur Leon Bernard
35043 RENNES CEDEX,FR
| | - Bernard Gibaud
- Integration de Donnees Multimedia en Anatomie et Physiologie Cerebrale Pour l'Aide a la Decision et l'Enseignement
INSERM : ERI1Université Rennes IFaculte de Medecine
2, Av du Professeur Leon Bernard
35043 RENNES CEDEX,FR
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Schleich JM, Dillenseger JL, Loeuillet L, Moulinoux JP, Almange C. Three-dimensional reconstruction and morphologic measurements of human embryonic hearts: a new diagnostic and quantitative method applicable to fetuses younger than 13 weeks of gestation. Pediatr Dev Pathol 2005; 8:463-73. [PMID: 16211458 PMCID: PMC2104785 DOI: 10.1007/s10024-005-0017-8] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 06/06/2005] [Accepted: 07/25/2005] [Indexed: 11/28/2022]
Abstract
Improvements in the diagnosis of congenital malformations explain the increasing early termination of pregnancies. Before 13 weeks of gestation, an accurate in vivo anatomic diagnosis cannot currently be made in all fetuses with current imaging instrumentation. Anatomopathologic examinations remain the gold standard to make accurate diagnoses, although they reach limits between 9 and 13 weeks of gestation. We present the first results of a methodology that can be applied routinely, using standard histologic section, thus enabling the reconstruction, visual estimate, and quantitative analysis of 13-week human embryonic cardiac structures. The cardiac blocks were fixed, embedded in paraffin, and entirely sliced by a microtome. One of 10 slices was topographically colored and digitized on an optical microscope. Cardiac volume was recovered by semiautomatic realignment of the sections. Another semiautomatic procedure allowed extracting and labeling of cardiac structures from the volume. Structures were studied with display tools, which disclosed the internal and external cardiac components and enabled determination of size, thickness, and precise positioning of ventricles, atria, and large vessels. This pilot study confirmed that a new 3-dimensional reconstruction and visualization method enables accurate diagnoses, including in embryos younger than 13 weeks. Its implementation at earlier stages of embryogenesis will provide a clearer view of cardiac development.
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Affiliation(s)
- Jean-Marc Schleich
- Département de Cardiologie et Maladies Vasculaires, Hôpital de Pontchaillou, CHR Rennes, France.
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Abstract
This paper is aimed at understanding epileptic patient disorders through the analysis of surface electroencephalograms (EEG). It deals with the detection of spikes or spike-waves based on a nonorthogonal wavelet transform. A multilevel structure is described that locates the temporal segments where abnormal events occur. These events are then visually interpreted by means of a 3D mapping technique. This 3D display makes use of a ray tracing scheme and combines both the functional (the EEG but also its wavelet representation) and the morphological data (acquired from computed tomography [CT] or magnetic resonance imaging [MRI] devices). The results show that a significant reduction of the clinical workload is obtained while the most important episodes are better reviewed and analyzed.
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Abstract
This paper presents a three-dimensional edge operator aimed at the detection of anatomical structures in medical imaging. It uses the spatial moments of gray level surface, and operates in three dimensions with any window size. It allows us to estimate the location and the contrast surface, as well as the surface orientation. The computation of the discrete version is reported. Bias and errors due to the spatial sampling and noise are analyzed both at a theoretical and experimental level. The moment-based operator is compared with other well-known edge operators on simple shaped primitives for which the analytical solution is known. The 3D rendering of real data is then provided by merging the operator in a ray-tracing framework.
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Affiliation(s)
- Limin M. Luo
- Image Processing Laboratory, Department of Biomedical Engineering
SouthEast UniversitySi Pai Lou 2, Nanjing, 210096,CN
| | - Chafiaâ Hamitouche
- LTSI, Laboratoire Traitement du Signal et de l'Image
INSERM : U642Université Rennes ICampus de Beaulieu,
263 Avenue du Général Leclerc - CS 74205 - 35042 Rennes Cedex,FR
| | - Jean-Louis Dillenseger
- LTSI, Laboratoire Traitement du Signal et de l'Image
INSERM : U642Université Rennes ICampus de Beaulieu,
263 Avenue du Général Leclerc - CS 74205 - 35042 Rennes Cedex,FR
- * Correspondence should be adressed to: Jean-Louis Dillenseger
| | - Jean-Louis Coatrieux
- LTSI, Laboratoire Traitement du Signal et de l'Image
INSERM : U642Université Rennes ICampus de Beaulieu,
263 Avenue du Général Leclerc - CS 74205 - 35042 Rennes Cedex,FR
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Abstract
We combined fluorescence labeling, digital image processing, and micromanipulation to investigate the intracellular events induced by inflicting a mechanical stress on rat basophilic leukemia cells. Our findings were as follows: 1. Most cells displayed a localized calcium rise in response to micropipet aspiration. This represented an average threefold increase as compared to resting level, and it was observed during the first 10 s following aspiration. A slow return to initial level occurred within about 3 min. Further, this calcium rise involved a mobilization of intracellular stores, since it was not prevented by adding a calcium chelator into the extracellular medium. 2. All micropipet-aspirated cells displayed a local accumulation of microfilaments, with a preferential localization in the cell protrusions or near the pipet tips. 3. No absolute correlation was found between the localization of calcium rise and cytoskeletal accumulation. 4. Cell deformability was decreased when intracellular calcium was maintained at a constant (high or low) level with ionomycin and/or EGTA. It is concluded that cells have a general ability to respond to mechanical stimulation by a coordinated set of events. More parameters must be studied before the mechanisms of cell shape regulation are fully understood.
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