Silver nanoparticle-decorated NiFe2O4/CuWO4 heterostructure electrocatalyst for oxygen evolution reactions

In this work, Ag nanoparticles decorated with NiFe2O4/CuWO4 heterostructure were synthesized using the step-wise precipitation method. The influence of varying Ag loading on the NiFe2O4/CuWO4 heterostructure and its electrochemical OER performance was extensively studied in 1 M KOH electrolyte. The obtained LSV profile was analyzed to determine the overpotential, Tafel slope, and onset potential. The heterostructure with an optimal Ag loading of 5 wt% required the least overpotential (1.60 V vs. RHE) for generating a current density of 10 mA cm-2 with a lower Tafel slope of 44.5 mV dec-1, indicating its faster OER kinetics. Furthermore, the composite remained stable over a period of 24 hours with a minimum rise in the overpotential after the stability test. The enhanced OER performance of the as-prepared catalyst can be attributed to the presence of multiple metallic elements in the Ag-loaded NiFe2O4/CuWO4 composite, which created a diverse array of oxygen-vacant sites with varying reactivity, enhancing the charge-transfer kinetics; and thus contributing to the overall efficiency of OER. Therefore, optimizing the Ag concentration and engineering a microstructure represents an encouraging strategy for developing cost-effective catalysts for next-generation energy-conversion applications.

Photocatalytic Degradation of Crystal Violet on Cu, Zn Doped BiVO4 Particles

Fabrication of codoped photocatalysts is a developing area of research. Herein, we explore the visible light photocatalytic properties of Cu, Zn codoped BiVO4 particles. Doping lower valent cations (Cu and Zn) makes the BiVO4 surface more acidic and enables us to target the basic crystal violet (CV) dye. The adopted hydrothermal protocol of synthesis results in the formation of Cu-Zn codoped monoclinic BiVO4 particles. Undoped monoclinic BiVO4, prepared by the same protocol, showed significant formation of oxygen vacancies. XPS analyses confirm the coexistence of Cu2+/Cu+ and Zn2+ dopants. Increased dopant percentage reduced oxygen vacancies. XRD indicates that Cu2+/Cu+ or Zn2+ dopants generally substitute Bi3+ in BiVO4. All photocatalysis activities for CV degradation are reported under near-neutral pH conditions. A typical codoped BiVO4 photocatalyst with 1% Zn and 2% Cu demonstrated the best CV degradation photocatalytic activity. The activity of this Zn, Cu codoped photocatalyst is better than that of pure, Zn-doped, and Cu-doped BiVO4 samples. Active species trapping experiments indicated the possible photocatalysis mechanism. The photocatalysts exhibited appropriate recyclability and photostability.

Magnetic Ni@C nanoadsorbents for methyl orange removal from water

In this study, Ni@C nanoparticles were produced and used as an adsorbent for removing methyl orange (MO) from an aqueous solution. The sol-gel method was utilized for the preparation of the particles. The X-ray diffraction pattern and transmission electron microscopy (TEM) were utilized to determine the phase, morphology, and size. The electron micrograph indicated the coating of carbon over Ni having size between 43 and 94 nm, and the Raman spectrum supported it. Among three, the maximum specific magnetization of the Ni@C nanocomposite was 55.78 emu/g for the N7 sample. From the BET approach, specific surface areas of 2.29 × 105, 3.66 × 105, and 5.48 × 105 cm2/g as well as average pore size of 49.30, 37.25, and 35.27 nm were observed for N5, N6, and N7, respectively. The Ni@C nanoparticles were magnetically separable and exhibited rapid adsorption of MO of different concentrations from their aqueous solutions. The N7 adsorbent displayed the highest MO adsorption capacity (~ 32 mg·g-1) along with maintaining an adsorption capacity of 81% even after 5 cycles. Adsorption isotherm and kinetic analysis gave critical inputs toward the possible adsorption mechanism.

Universal DNA methylation age across mammalian tissues

Aging, often considered a result of random cellular damage, can be accurately estimated using DNA methylation profiles, the foundation of pan-tissue epigenetic clocks. Here, we demonstrate the development of universal pan-mammalian clocks, using 11,754 methylation arrays from our Mammalian Methylation Consortium, which encompass 59 tissue types across 185 mammalian species. These predictive models estimate mammalian tissue age with high accuracy (r > 0.96). Age deviations correlate with human mortality risk, mouse somatotropic axis mutations and caloric restriction. We identified specific cytosines with methylation levels that change with age across numerous species. These sites, highly enriched in polycomb repressive complex 2-binding locations, are near genes implicated in mammalian development, cancer, obesity and longevity. Our findings offer new evidence suggesting that aging is evolutionarily conserved and intertwined with developmental processes across all mammals.

Waste remediation: Low-temperature synthesis of hybrid Cu(OH)2/CuO and CuO nanostructures from spent printed circuit boards and their dye degradation studies

The demand for environmentally friendly and sustainable resource utilization techniques for recycling waste printed circuit boards is significant due to their status as valuable secondary resources, containing high-purity copper and precious metals. In this context, Cu(OH)2/CuO and CuO nanostructures were fabricated using alkaline precipitation and low-temperature aging methods using the strip solution originated from laboratory-scale spent mobile phone printed circuit board recovery process. XRD, FTIR, FESEM-EDX, and TEM were utilized to characterize the as-recovered nanoproducts. A hybrid structure of Cu(OH)2/CuO was formed at 70°, and monoclinic CuO phase was formed at 80 °C aging time. The results show that Cu(OH)2/CuO nanoflakes have an average crystallite size of 24.06 nm and a particle width of 22 ± 3 nm. Cu(OH)2/CuO nanoflakes formed at 70 °C aging temperature and 24-h residence time have finer crystallite and particle sizes than CuO-ridged nanospheres formed at 80 °C aging temperature. The optical band gap energy of Cu(OH)2/CuO and CuO nanostructures formed was found to be 2.28 eV and 2.22 eV, respectively. The hybrid Cu(OH)2/CuO nanostructure photocatalyzed the decomposed 97.28% rhodamine blue using a visible light source, whereas the CuO nanostructure degraded only 14.64% rhodamine blue dye under similar conditions. A surfactant-less hybrid structure is developed without the use of any chemical precursor. Thus, a high value-added product is produced using one waste material to remove another waste in wastewater treatment.

Genesis of copper oxide nanoparticles from waste printed circuit boards and evaluation of their photocatalytic activity

Discarded Printed Circuit Boards (PCBs) are one of the secondary resources of high-purity copper, and precious materials, which if disposed off inappropriately may present several environmental risks. This study focuses on the production of copper oxide nanoparticles (CuO NPs) from reclaimed copper via a facile precipitation route to obtain a value-added nanoproduct. The synthesis involved the dissolution of downsized PCBs, leaching of Cu into the solution phase and the precipitation of nanoparticles (NPs) in an alkaline medium. XRD analysis confirmed the as-synthesized NPs were monoclinic CuO of size 19.23 nm without any impurity. HRTEM analysis confirmed that the NPs were nearly round spheres with average particle size of 19.973 ± 6.036 nm. The NPs have a specific surface area of 200 m²/g and mesoporous structure with mean pore diameter of 18.051 nm. The CuO NPs photocatalyzed the degradation of Congo Red under visible light irradiation. Hence, the PCB e-waste was utilized to produce nanomaterials with added-values, decreasing environmental problems.

Synthesis and characterization of titanium-substituted nanocrystalline Co2-Y hexaferrite: magnetically retrievable photocatalyst for treatment of methyl orange contaminated wastewater

Rapid industrial growth causes considerable environmental havoc, adversely affecting human and aqueous life. It becomes a significant concern to deal with adequate wastewater treatment strategies by converging on water scarcity. This research work explored the synthesis of titanium-substituted Y-type barium hexaferrite (Co₂-Y), having a general formula of Ba₂Co₂Fe_12-xTi_xO₂₂ (x = 0.0, 0.1, 0.2, 0.3, 0.4, and 0.5), using a facile nitrate-based sol-gel auto-combustion route and its suitability was investigated as a heterogeneous catalyst within the photo-Fenton-based degradation of methyl orange (MO), one of the significant pollutants generated from textile industries. Developing a thermochemically stable and magnetically separable heterogeneous catalyst for photocatalytic decomposition of nonbiodegradable organic dye from wastewater was also emphasized. The as-prepared nanocrystalline Co₂-Y powders were analyzed using XRD, FTIR, DLS, UV-visible spectroscopy, SEM, VSM, and XPS. Furthermore, the photocatalytic degradation performance of pristine and titanium substituted Ba₂Co₂Fe_11.6Ti_0.4O₂₂ ferrite, having the lowest bandgap value among all samples, was quantified and compared in terms of apparent rate constant (k_arc) value and turnover frequency values. The enriched photocatalytic performance was correlated with the existence of multi-valance states of transition metal cations and the availability of oxygen vacancy, confirmed by the surface chemistry using the XPS analysis. The modified (enhanced thermal and chemical stability) hexaferrite catalyst was magnetically separable and reusable without significant losses to its catalytic performance. This promising catalyst may be considered as a replacement for soft ferrite materials to catalyze the degradation of several other nonbiodegradable organic pollutants from wastewater in large-scale industries.

The bandgap of sulfur-doped Ag2O nanoparticles

A narrow band gap restricts photocatalytic applications of Ag₂O nanoparticles, but appropriate doping can favorably modify this aspect. Given this, density functional theory (DFT) calculations were conducted, revealing that substitutional sulfur doping of Ag₂O could increase its bandgap and stabilize oxygen vacancies. A hydrothermal precipitation protocol was employed to prepare sulfur-doped (S-doped) Ag₂O nanoparticles. The band gap of the prepared nanoparticles increased to 1.89 eV with 1.25-mole percent S-doping. XPS analysis of the samples also revealed that S-doping increased oxygen vacancies in the prepared Ag₂O nanoparticles. Furthermore, S-doping caused a major shift in the valence band position to a negative value. These doped Ag₂O nanoparticles showed an enhanced visible-light photocatalytic activity towards rhodamine B (RhB) degradation.

Fenton reaction by H2O2 produced on magnetically recyclable Ag/CuWO4/NiFe2O4 photocatalyst

The development of recyclable H2O2-producing photocatalysts with in-situ Fenton-like organic pollutant degradation is currently a topical area of research. This research investigates the visible light photocatalytic formation of H2O2 on...

Cd-doped Ag2O/BiVO4 visible light Z-scheme photocatalyst for efficient ciprofloxacin degradation

Foreign element doping can produce new photocatalysts with different band edge positions and adsorption properties. A composite of such a doped semiconductor with another component should enhance its photocatalytic properties towards a target substrate. The present investigation used a simple hydrothermal protocol to prepare Cd-doped Ag₂O nanoparticles. The Cd-doping of Ag₂O nanoparticles changed its valence band maximum position from 0.8 eV (for undoped Ag₂O nanoparticles) to 2.67 eV with a slight narrowing of the Ag₂O bandgap. A combination of DFT calculation and XRD results showed that the dopant Cd substituted Ag in the Ag₂O lattice. The doped material is an effective photocatalyst for ciprofloxacin degradation but with poor recyclability. The joining of a BiVO₄ part to the Cd-doped Ag₂O nanostructures gave a composite with improved photocatalytic activity and recyclability towards ciprofloxacin degradation. DFT calculations showed that BiVO₄ has a higher oxygen affinity than Cd-doped Ag₂O. The XPS characterization of the composite and appropriate active species scavenger experiments demonstrated a Z-scheme mechanism. Superoxide radicals play a critical role in CIP degradation.

Mechanism of phenol and p-nitrophenol adsorption on kaolinite surface in aqueous medium: A molecular dynamics study

Very few aqueous medium experimental studies focus on the molecular interaction mechanism between the adsorbent and the adsorbate. Herein, we investigate the adsorption of two organic pollutants, phenol and p-nitrophenol (PNP) in dilute aqueous solution conditions on kaolinite (001) surface through classical molecular dynamics (MD) simulations. The present investigation addresses both adsorption isotherms and mechanistic issues. MD simulations at different solute concentrations generated density profiles and, thereby, adsorption isotherms. The data generated for phenol adsorption fitted both Langmuir and Freundlich isotherm models equally well. Alternatively, PNP adsorption data on the kaolinite surface followed the Langmuir model better. Overall, phenol exhibits a higher adsorption capacity on kaolinite than PNP. These results support the experimental observations made in earlier publications in the literature. Radial distribution functions (RDF) between various atom types on the adsorbent and molecules in the solution phase point toward hydrogen bond-dominated interaction mechanisms for organic pollutants.

Frequently used antiemetic agent dexamethasone enhances the metastatic behaviour of select breast cancer cells

Glucocorticoids, such as dexamethasone (Dex), are used to prevent common side effects induced by chemotherapy and are heavily prescribed for solid cancers such as breast cancer. There is substantial pre-clinical data to support that Dex activation of the glucocorticoid receptor overrides chemotherapy-induced apoptosis in breast cancer cell lines. These findings are compounded by a recent study demonstrating that increased glucocorticoid receptor activation by endogenous stress hormones increased breast cancer heterogeneity and metastasis. Our study is the first to use both in vitro and in vivo models to thoroughly compare the Dex response on the migration of multiple estrogen receptor negative (ER-) and ER+ cancer cell lines. ER+ and ER- breast cancer cell lines were studied to compare their endogenous glucocorticoid activity as well as their metastatic ability in response to Dex treatment. We show that in the ER- breast cancer lines, Dex increases cell numbers, invasiveness, and migration, while decreasing apoptotic ability. Furthermore, we show that following Dex treatment, ER- breast cancer lines migrate further in an in vivo zebrafish model in comparison to ER+ cell lines. The use of ROR1 antibody to block WNT signaling diminished the metastatic properties of ER- cells, however recombinant WNT5A alone was not sufficient to induce migration. Taken together, we demonstrate that Dex treatment exacerbates the metastatic potential of ER- but not ER+ cells. These findings add to the growing body of data stressing the potential adverse role of endogenous and synthetic glucocorticoids in breast cancer biology.

Evaluation of prognostic risk models for postoperative pulmonary complications in adult patients undergoing major abdominal surgery: a systematic review and international external validation cohort study

BACKGROUND

Stratifying risk of postoperative pulmonary complications after major abdominal surgery allows clinicians to modify risk through targeted interventions and enhanced monitoring. In this study, we aimed to identify and validate prognostic models against a new consensus definition of postoperative pulmonary complications.

METHODS

We did a systematic review and international external validation cohort study. The systematic review was done in accordance with the Preferred Reporting Items for Systematic Reviews and Meta-Analyses guidelines. We searched MEDLINE and Embase on March 1, 2020, for articles published in English that reported on risk prediction models for postoperative pulmonary complications following abdominal surgery. External validation of existing models was done within a prospective international cohort study of adult patients (≥18 years) undergoing major abdominal surgery. Data were collected between Jan 1, 2019, and April 30, 2019, in the UK, Ireland, and Australia. Discriminative ability and prognostic accuracy summary statistics were compared between models for the 30-day postoperative pulmonary complication rate as defined by the Standardised Endpoints in Perioperative Medicine Core Outcome Measures in Perioperative and Anaesthetic Care (StEP-COMPAC). Model performance was compared using the area under the receiver operating characteristic curve (AUROCC).

FINDINGS

In total, we identified 2903 records from our literature search; of which, 2514 (86·6%) unique records were screened, 121 (4·8%) of 2514 full texts were assessed for eligibility, and 29 unique prognostic models were identified. Nine (31·0%) of 29 models had score development reported only, 19 (65·5%) had undergone internal validation, and only four (13·8%) had been externally validated. Data to validate six eligible models were collected in the international external validation cohort study. Data from 11 591 patients were available, with an overall postoperative pulmonary complication rate of 7·8% (n=903). None of the six models showed good discrimination (defined as AUROCC ≥0·70) for identifying postoperative pulmonary complications, with the Assess Respiratory Risk in Surgical Patients in Catalonia score showing the best discrimination (AUROCC 0·700 [95% CI 0·683-0·717]).

INTERPRETATION

In the pre-COVID-19 pandemic data, variability in the risk of pulmonary complications (StEP-COMPAC definition) following major abdominal surgery was poorly described by existing prognostication tools. To improve surgical safety during the COVID-19 pandemic recovery and beyond, novel risk stratification tools are required.

FUNDING

British Journal of Surgery Society.

AgI/CuWO4 Z-scheme photocatalyst for the degradation of organic pollutants: Experimental and molecular dynamics studies

While the knowledge of the adsorption properties of components of a composite heterogeneous photocatalyst is critical to its applicability to a particular reaction, there has been little research in this direction. The present research is on the development of AgI/CuWO₄ nanocomposites that photocatalytically degraded ciprofloxacin and rhodamine B in an aqueous medium under visible light irradiation. The nanocomposites were prepared by a step-wise precipitation protocol. XPS analysis and active species trapping experiments demonstrated that the photocatalysis proceeded by a Z-scheme mechanism. Large scale aqueous medium molecular dynamics simulations showed that oxygen and CIP adsorb on the AgI part, while water interacts intensely with the CuWO₄ component. Information from experimental and molecular dynamics studies was combined to arrive at the photocatalysis mechanism.

Efficient removal of chromate ions from aqueous solution using a highly cost-effective ferric coordinated [3-(2-aminoethylamino)propyl]trimethoxysilane-MCM-41 adsorbent

The present investigation involves synthesis and characterization of MCM-41-AEAPTMS-Fe(iii)Cl using coordinated Fe(iii) on MCM-41-AEAPTMS for efficient removal of hazardous Cr(vi) ions from aqueous solution. The adsorbent MCM-41-AEAPTMS-Fe(iii)Cl was characterized using small-angle X-ray diffraction (SAX), transmission electron microscopy (TEM), scanning electron microscopy (SEM), energy dispersive X-ray (EDX), Fourier-transform infrared (FT-IR) and Brunauer-Emmett-Teller (BET) surface analyzer techniques. The BET surface area was found to be 87.598 m2 g-1. The MCM-41-AEAPTMS-Fe(iii)Cl effectively adsorbs Cr(vi) with an adsorption capacity acquiring the maximum value of 84.9 mg g-1 at pH 3 at 298 K. The data followed pseudo-second-order kinetics and obeyed the Langmuir isotherm model. The thermodynamic data proved the exothermic and spontaneous nature of Cr(vi) ion adsorption on MCM-41-AEAPTMS-Fe(iii). Further, the higher value of ΔH° (-64.339 kJ mol-1) indicated that the adsorption was chemisorption in nature.

Experimental and DFT calculation study of interaction between silver nanoparticle and 1-butyl-3-methyl imidazolium tetrafluoroborate ionic liquid

The mechanism of stabilization of silver nanoparticles (Ag NPs) by 1-butyl-3-methylimidazolium tetrafluoroborate ionic liquid (IL) is elucidated from experimental spectroscopic investigations and density functional theory (DFT) calculations. FTIR spectrum of the synthesized IL stabilized silver nanoparticles reveals small red shift in B–F stretching frequency while C–H stretching remains unshifted. There is no shift in NMR peaks of IL before and after the synthesis of IL stabilized Ag NPs. This suggests that Ag NPs are surrounded by anions of ILs. The optimized structure obtained from density functional theory (DFT) calculations also shows the anionic part of the IL surrounding the Ag nanocluster. This is supported by the IR frequency data calculated using DFT. The calculated binding energy and interaction energy obtained between cluster and IL is considerably attractive. Density of State (DOS) calculation shows that the HOMO-LUMO gap of the Ag cluster-IL composite is significantly lesser than that of the IL alone.

Mechanism of visible light enhanced catalysis over curcumin functionalized Ag nanocatalysts

There is little research on the visible light photocatalytic properties of the hybrids of plasmonic metals and organic molecules (OM) with the HOMO-LUMO gap in the visible range. Here, we investigate the mechanism of the visible light enhanced reduction of p-nitrophenol (PNP) by glycerol (a green reductant) at ambient temperature over curcumin functionalized Ag nanoparticles (c-AgNPs). The catalytic activity got significantly boosted under visible light irradiation. Reaction kinetics indicated that the catalytic mechanism followed under visible light and in the dark were different. DFT calculations showed that in the ground state, the HOMO resides on Ag while the LUMO is on the curcumin part of the composite. TD-DFT calculations demonstrated the transfer of charge from Ag to curcumin on photo-excitation. Based on this information, we propose a mechanism for understanding the role of curcumin in this photocatalytic phenomenon.

Ag-Cu Bimetallic Nanoparticles as Efficient Oxygen Reduction Reaction Electrocatalysts in Alkaline Media

The alkaline medium oxygen reduction reaction (ORR) activities of Ag-Cu bimetallic nanoparticles (BNPs), consisting of neighboring Ag and Cu domains, were studied and compared with those of pure Ag and Cu nanoparticles prepared by the same polyol route. Three variations of Ag-Cu BNPs viz. Ag-Cu (4:1), Ag-Cu (2:1), Ag-Cu (1:1) BNPs were considered. The electrocatalytic performances of these nanoparticles were investigated by using different techniques, such as cyclic voltammetry (CV) and linear sweep voltammograms (LSV). The Ag-Cu bimetallics demonstrated synergistic ORR electrocatalytic activity compared to pure Ag or Cu. Optimum values of these parameters were observed for Ag-Cu (4:1) BNPs. According to LSV, the reduction peak position is at lower applied potential and showed higher intensity for the Ag-Cu (4:1) as compared to Ag-Cu (2:1) and Ag-Cu (1:1) BNPs. Density Functional Theory (DFT) calculations show that charge transfer from Cu to Ag (in the bimetallic nanoparticles) results in their stronger oxygen interaction and water activation properties relative to that of pure Ag nanoparticles.

Visible-Light Plasmonic Enhancement of Catalytic Activity of Anisotropic Silver Nanoparticles

Synthesis of silver nanoparticles (AgNPs) in presence of copper salt (as the etchant) led to the formation of nanoparticle samples with different fractions of anisotropic particles. The proportion of anisotropic nanoparticles decreased with increase in ratio of precursor Cu salt in the preparation protocol. These AgNPs samples were found to catalyse p-nitrophenol reduction by glycerol and Fenton oxidation of methyl orange. The catalytic activity of these AgNPs samples for these reactions increased with the fraction of anisotropic nanoparticles in the catalyst samples. On conducting these reactions under cool white LED visible light, the catalytic activity of AgNPs catalyst samples increased by 2 to 3 times compared to that observed in dark. The photo-Fenton MO degradation catalytic activity obtained is among the best reported in literature. However, the order of the reaction did not change whether the reaction was conducted under visible light or in dark. Direct plasmonic catalytic mechanisms are proposed to explain the enhancement in reactivity under visible light.

ZnO/CuO nanocomposites from recycled printed circuit board: preparation and photocatalytic properties

Cost-effective recycling of e-waste (from computer printed circuit boards, PCB's) for the synthesis of metal oxide nanocomposites is demonstrated. Metals in electronic components of waste memory slots were leached out using nitric acid (HNO₃). Compositional analyses of the filtrate obtained after leaching were 66 wt.% Cu, 27.7 wt.% Zn, and 6.2 wt.% Ni. The leached out metal salt solutions were subjected to alkaline hydrothermal treatment to synthesize nanocomposites. Two nanoparticle samples were prepared, one without any stabilizing agent and another sample with PVP as a stabilizing agent. XRD, HR-XRD, HR-TEM, UV-DRS, UV-visible spectroscopy was used to characterize the as-prepared metal oxide nanoparticles. The analysis showed the formation of ZnO/CuO nanocomposites only. No nickel oxide component was precipitated under the studied hydrothermal experimental conditions. Most of the ZnO/CuO nanocomposite particles obtained by this route consisted of fine ZnO nanostructures precipitated on CuO cores. The ZnO and CuO components exhibit both direct and indirect band gaps in the visible range. The nanocomposites demonstrate good visible light photo-Fenton methyl orange (MO) degradation by pseudo-zero order kinetics.

Epigenetic regulation of diabetogenic adipose morphology

Objective

Hypertrophic white adipose tissue (WAT) morphology is associated with insulin resistance and type 2 diabetes. The mechanisms governing hyperplastic versus hypertrophic WAT expansion are poorly understood. We assessed if epigenetic modifications in adipocytes are associated with hypertrophic adipose morphology. A subset of genes with differentially methylated CpG-sites (DMS) in the promoters was taken forward for functional evaluation.

Methods

The study included 126 women who underwent abdominal subcutaneous biopsy to determine adipose morphology. Global transcriptome profiling was performed on WAT from 113 of the women, and CpG methylome profiling on isolated adipocytes from 78 women. Small interfering RNAs (siRNA) knockdown in human mesenchymal stem cells (hMSCs) was used to assess influence of specific genes on lipid storage.

Results

A higher proportion of CpG-sites were methylated in hypertrophic compared to hyperplastic WAT. Methylation at 35,138 CpG-sites was found to correlate to adipose morphology. 2,102 of these CpG-sites were also differentially methylated in T2D; 98% showed directionally consistent change in methylation in WAT hypertrophy and T2D. We identified 2,508 DMS in 638 adipose morphology-associated genes where methylation correlated with gene expression. These genes were over-represented in gene sets relevant to WAT hypertrophy, such as insulin resistance, lipolysis, extracellular matrix organization, and innate immunity. siRNA knockdown of ADH1B, AZGP1, C14orf180, GYG2, HADH, PRKAR2B, PFKFB3, and AQP7 influenced lipid storage and metabolism.

Conclusion

CpG methylation could be influential in determining adipose morphology and thereby constitute a novel antidiabetic target. We identified C14orf180 as a novel regulator of adipocyte lipid storage and possibly differentiation.

•

Hypertrophic adipose morphology display a distinct adipocyte CpG-methylome profile.

•

Adipose hypertrophy and type 2 diabetes display strong overlap in CpG-methylome profile.

•

C14orf180 is a novel regulator of adipocyte lipid storage and possibly adipogenesis.

Autologous fat transplantation alters gene expression patterns related to inflammation and hypoxia in the irradiated human breast

BACKGROUND

Radiation-induced fibrosis, an adverse effect of breast cancer treatment, is associated with functional and cosmetic impairment as well as surgical complications. Clinical reports suggest improvement following autologous fat transplantation, but the mechanisms underlying this effect are unknown. A global gene expression analysis was undertaken to identify genetic pathways dysregulated by radiation and evaluate the impact of autologous fat transplantation on gene expression.

METHODS

Adipose tissue biopsies were taken synchronously from irradiated and contralateral non-irradiated breasts, before and 1 year after autologous fat transplantation. Whole-genome gene expression analyses were performed, and Hallmark gene set analysis used to explore the effect of radiotherapy and autologous fat transplantation on gene expression.

RESULTS

Forty microarrays were analysed, using bilateral biopsies taken from ten patients before and after autologous fat transplantation. Forty-five pathways were identified among the 3000 most dysregulated transcripts after radiotherapy in irradiated compared with non-irradiated breast (P ≤ 0·023; false discovery rate (FDR) no higher than 0·026). After autologous fat transplantation, 575 of the 3000 genes were again altered. Thirteen pathways (P ≤ 0·013; FDR 0·050 or less) were identified; the top two canonical pathways were interferon-γ response and hypoxia. Correlative immunohistochemistry showed increased macrophage recruitment in irradiated tissues.

CONCLUSION

The present findings contribute to understanding of how autologous fat transplantation can ameliorate radiation-induced fibrosis. This further supports the use of autologous fat transplantation in the treatment of radiation-induced fibrosis. Surgical relevance Clinical studies have indicated that autologous fat transplantation (AFT) stimulates regression of chronic inflammation and fibrosis caused by radiotherapy in skin and subcutaneous fat. However, there is a paucity of biological evidence and the underlying processes are poorly understood. Human data are scarce, whereas experimental studies have focused mainly either on the effect of irradiation or AFT alone. The present results indicate that radiotherapy causes dysregulated gene expression in fibrosis-related pathways in adipose tissues in humans. They also show that AFT can cause a reversal of this, with several dysregulated genes returning to nearly normal expression levels. The study provides biological evidence for the impact of AFT on radiation-induced dysregulated gene expression in humans. It supports the use of AFT in the treatment of radiation-induced fibrosis, associated with severe morbidity and surgical challenges.

Forces acting on codon bias in malaria parasites

Malaria parasite genomes have a range of codon biases, with Plasmodium falciparum one of the most AT-biased genomes known. We examined the make up of synonymous coding sites and stop codons in the core genomes of representative malaria parasites, showing first that local DNA context influences codon bias similarly across P. falciparum, P. vivax and P. berghei, with suppression of CpG dinucleotides and enhancement of CpC dinucleotides, both within and aross codons. Intense asexual phase gene expression in P. falciparum and P. berghei is associated with increased A3:G3 bias but reduced T3:C3 bias at 2-fold sites, consistent with adaptation of codons to tRNA pools and avoidance of wobble tRNA interactions that potentially slow down translation. In highly expressed genes, the A3:G3 ratio can exceed 30-fold while the T3:C3 ratio can be less than 1, according to the encoded amino acid and subsequent base. Lysine codons (AAA/G) show distinctive behaviour with substantially reduced A3:G3 bias in highly expressed genes, perhaps because of selection against frameshifting when the AAA codon is followed by another adenine. Intense expression is also associated with a strong bias towards TAA stop codons (found in 94% and 89% of highly expressed P. falciparum and P. berghei genes respectively) and a proportional rise in the TAAA stop ‘tetranucleotide’. The presence of these expression-linked effects in the relatively AT-rich malaria parasite species adds weight to the suggestion that AT-richness in the Plasmodium genus might be a fitness adaptation. Potential explanations for the relative lack of codon bias in P. vivax include the distinct features of its lifecycle and its effective population size over evolutionary time.

Curcumin-Functionalized Ag/Ag2 O Nanocomposites: Efficient Visible-Light Z-scheme Photocatalysts

Curcumin-functionalized Ag/Ag₂ O (c-Ag/Ag₂ O) nanocomposites with varying proportions of curcumin and Ag/Ag₂ O were prepared by a simple one pot green synthesis protocol in aqueous medium. The plasmonic band undergoes slight redshift, broadening and decrease in intensity with increase in the proportion of Ag₂ O formed. These composite nanoparticles were found to be efficient visible-light photocatalysts for aerobic oxidation of methyl orange and rhodamine B (RhB). Functionalization by curcumin significantly enhanced the photocatalytic activity with good reusability. The photocatalytic oxidation rate showed super linear increase with light intensity because of localized surface plasmon resonance (LSPR)-induced strong near field. The trapping experiments confirmed that superoxide radicals were the main active species responsible for the degradation reaction. A plasmonic Z-scheme photocatalytic mechanism is proposed to explain the possible charge transfer and separation behavior of electron-hole pairs among Ag, Ag₂ O and curcumin under visible-light irradiation.

The cyclin-like protein, SPY1, regulates the ERα and ERK1/2 pathways promoting tamoxifen resistance

The Ras/Raf/MEK/ERK pathway conveys growth factor and mitogen signalling to control the phosphorylation of a plethora of substrates regulating proliferation, survival, and migration. The Ras signalling pathway is frequently associated with poor prognosis and drug resistance in various cancers including those of the blood, breast and prostate. Activation of the downstream effector ERK does not always occur via a linear cascade of events; complicating the targeting of this pathway therapeutically. This work describes a novel positive feedback loop where the cell cycle regulatory factor Spy1 (RINGO; gene SPDYA) activates ERK1/2 in a MEK-independent fashion. Spy1 was originally isolated for the ability to stimulate Xenopus oocyte maturation via a MAPK-signalling pathway and is known to override apoptosis triggered by the DNA damage response. We demonstrate that mammalian Spy1-mediated ERK activation increases ligand-independent phosphorylation and activation of estrogen receptor α, correlating with a decrease in tamoxifen sensitivity. This could define a novel druggable mechanism driving proliferation and resistance in select cancers.

Oral supplementation with liposomal glutathione elevates body stores of glutathione and markers of immune function

BACKGROUND/OBJECTIVES

Glutathione (GSH) is the most abundant endogenous antioxidant and a critical regulator of oxidative stress. Maintenance of optimal tissues for GSH levels may be an important strategy for the prevention of oxidative stress-related diseases. We investigated if oral administration of liposomal GSH is effective at enhancing GSH levels in vivo.

SUBJECTS/METHODS

A 1-month pilot clinical study of oral liposomal GSH administration at two doses (500 and 1000 mg of GSH per day) was conducted in healthy adults. GSH levels in whole blood, erythrocytes, plasma and peripheral blood mononuclear cells (PBMCs) were assessed in 12 subjects at the baseline and after 1, 2 and 4 weeks of GSH administration.

RESULTS

GSH levels were elevated after 1 week with maximum increases of 40% in whole blood, 25% in erythrocytes, 28% in plasma and 100% in PBMCs occurring after 2 weeks (P<0.05). GSH increases were accompanied by reductions in oxidative stress biomarkers, including decreases of 35% in plasma 8-isoprostane and 20% in oxidized:reduced GSH ratios (P<0.05). Enhancements in immune function markers were observed with liposomal GSH administration including Natural killer (NK) cell cytotoxicity, which was elevated by up to 400% by 2 weeks (P<0.05), and lymphocyte proliferation, which was elevated by up to 60% after 2 weeks (P<0.05). Overall, there were no differences observed between dose groups, but statistical power was limited due to the small sample size in this study.

CONCLUSIONS

Collectively, these preliminary findings support the effectiveness of daily liposomal GSH administration at elevating stores of GSH and impacting the immune function and levels of oxidative stress.

Methionine-restricted diet inhibits growth of MCF10AT1-derived mammary tumors by increasing cell cycle inhibitors in athymic nude mice

Background

Dietary methionine restriction (MR) improves healthspan in part by reducing adiposity and by increasing insulin sensitivity in rodent models. The purpose of this study was to determine whether MR inhibits tumor progression in breast cancer xenograft model and breast cancer cell lines.

Methods

Athymic nude mice were injected with MCF10AT1 cells in Matrigel® and fed a diet containing either 0.86 % methionine (control fed, CF), or 0.12 % methionine (MR) for 12 weeks. Plasma amino acid concentrations were measured by UPLC, and proliferation and apoptosis were examined using RT-PCR, immunohistochemistry, and Cell Titer 96® Aqueous One Solution Cell Proliferation assay.

Results

Mice on the MR diet had reduced body weight and decreased adiposity. They also had smaller tumors when compared to the mice bearing tumors on the CF diet. Plasma concentrations of the sulfur amino acids (methionine, cysteine, and taurine) were reduced, whereas ornithine, serine, and glutamate acid were increased in mice on the MR diet. MR mice exhibited decreased proliferation and increased apoptosis in cells that comprise the mammary glands and tumors of mice. Elevated expression of P21 occurred in both MCF10AT1-derived tumor tissue and endogenously in mammary gland tissue of MR mice. Breast cancer cell lines MCF10A and MDA-MB-231 grown in methionine-restricted cysteine-depleted media for 24 h also up-regulated P21 and P27 gene expression, and MDA-MB-231 cells had decreased proliferation.

Conclusion

MR hinders cancer progression by increasing cell cycle inhibitors that halt cell cycle progression. The application of MR in a clinical setting may provide a delay in the progression of cancer, which would provide more time for conventional cancer therapies to be effective.

Electronic supplementary material

The online version of this article (doi:10.1186/s12885-016-2367-1) contains supplementary material, which is available to authorized users.