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Wang P, Ma J, Wang X, Tan Q. Rising atmospheric CO 2 levels result in an earlier cyanobacterial bloom-maintenance phase with higher algal biomass. WATER RESEARCH 2020; 185:116267. [PMID: 32798892 DOI: 10.1016/j.watres.2020.116267] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/19/2020] [Revised: 06/28/2020] [Accepted: 08/03/2020] [Indexed: 06/11/2023]
Abstract
The effect of rising atmospheric CO2 on freshwater lakes is a subject of considerable debate. However, it is not clear how rising CO2 concentration affects cyanobacterial bloom development under potential nutrient limitation conditions and if CO2 should be taken into account in making nutrient reduction strategy. To fill the knowledge gaps, this study investigated the spatiotemporal variability in aquatic CO2 concentration (pCO2) from 2006 to 2016 in Lake Taihu, where cyanobacterial blooms often occurred from late spring to the early fall. Lake Taihu is an atmospheric CO2 source in May and November, with only 18% and 11% pCO2-undersaturated areas, respectively. During cyanobacterial bloom in August, 81% of the lake areas are pCO2-undersaturated, absorbing ~ 0.53 t C/h of atmospheric CO2. The results demonstrated that CO2 transfer across air-water interface was important in supporting cyanobacterial bloom development. Besides, Field investigation showed that the chlorophyll a level is significantly positively correlated with supersaturated pCO2 (>13.56 µmol/L) in May, but pCO2 decreases with high chlorophyll a levels in August, suggesting that cyanobacterial growth would be promoted by high pCO2 over a threshold. These observations suggested that the effect of rising atmospheric CO2 on freshwater lakes and cyanobacterial blooms should be paid attention to. Further, when the N- and P-levels are >0.3 mg/L and >0.02 mg/L, respectively, high-pCO2 conditions allow a more rapid growth rate of cyanobacteria via improved nutrient-use efficiency. Moreover, cyanobacteria afford maximum N- or P-use efficiency at lower N- or P-concentrations with high CO2 concentration. This improvement would result in an earlier bloom-maintenance phase and higher cyanobacterial biomass. In this case, nutrient reduction is more imperative under future high CO2 conditions.
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Affiliation(s)
- Peifang Wang
- Key Laboratory of Integrated Regulation and Resources Development on Shallow Lakes, Ministry of Education, Hohai University, Nanjing, China, 210098,; College of Environment, Hohai University, Nanjing, China, 210098.
| | - Jingjie Ma
- Key Laboratory of Integrated Regulation and Resources Development on Shallow Lakes, Ministry of Education, Hohai University, Nanjing, China, 210098,; College of Environment, Hohai University, Nanjing, China, 210098
| | - Xun Wang
- Key Laboratory of Integrated Regulation and Resources Development on Shallow Lakes, Ministry of Education, Hohai University, Nanjing, China, 210098,; College of Environment, Hohai University, Nanjing, China, 210098
| | - Qingqian Tan
- Key Laboratory of Integrated Regulation and Resources Development on Shallow Lakes, Ministry of Education, Hohai University, Nanjing, China, 210098,; College of Environment, Hohai University, Nanjing, China, 210098
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Bathellier C, Yu LJ, Farquhar GD, Coote ML, Lorimer GH, Tcherkez G. Ribulose 1,5-bisphosphate carboxylase/oxygenase activates O 2 by electron transfer. Proc Natl Acad Sci U S A 2020; 117:24234-24242. [PMID: 32934141 PMCID: PMC7533879 DOI: 10.1073/pnas.2008824117] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023] Open
Abstract
Ribulose 1,5-bisphosphate carboxylase/oxygenase (Rubisco) is the cornerstone of atmospheric CO2 fixation by the biosphere. It catalyzes the addition of CO2 onto enolized ribulose 1,5-bisphosphate (RuBP), producing 3-phosphoglycerate which is then converted to sugars. The major problem of this reaction is competitive O2 addition, which forms a phosphorylated product (2-phosphoglycolate) that must be recycled by a series of biochemical reactions (photorespiratory metabolism). However, the way the enzyme activates O2 is still unknown. Here, we used isotope effects (with 2H, 25Mg, and 18O) to monitor O2 activation and assess the influence of outer sphere atoms, in two Rubisco forms of contrasted O2/CO2 selectivity. Neither the Rubisco form nor the use of solvent D2O and deuterated RuBP changed the 16O/18O isotope effect of O2 addition, in clear contrast with the 12C/13C isotope effect of CO2 addition. Furthermore, substitution of light magnesium (24Mg) by heavy, nuclear magnetic 25Mg had no effect on O2 addition. Therefore, outer sphere protons have no influence on the reaction and direct radical chemistry (intersystem crossing with triplet O2) does not seem to be involved in O2 activation. Computations indicate that the reduction potential of enolized RuBP (near 0.49 V) is compatible with superoxide (O2•-) production, must be insensitive to deuteration, and yields a predicted 16O/18O isotope effect and energy barrier close to observed values. Overall, O2 undergoes single electron transfer to form short-lived superoxide, which then recombines to form a peroxide intermediate.
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Affiliation(s)
- Camille Bathellier
- Elementar France, Spectrométrie de Masse Isotopique, 69428 Lyon Cedex 3, France
- Research School of Biology, ANU Joint College of Sciences, Australian National University, 2601 Canberra ACT, Australia
| | - Li-Juan Yu
- Australian Research Council Centre of Excellence for Electromaterials Science, Research School of Chemistry, ANU Joint College of Sciences, Australian National University, 2601 Canberra ACT, Australia
| | - Graham D Farquhar
- Research School of Biology, ANU Joint College of Sciences, Australian National University, 2601 Canberra ACT, Australia;
| | - Michelle L Coote
- Australian Research Council Centre of Excellence for Electromaterials Science, Research School of Chemistry, ANU Joint College of Sciences, Australian National University, 2601 Canberra ACT, Australia
| | - George H Lorimer
- Department of Chemistry and Biochemistry, University of Maryland, College Park, MD 20742
| | - Guillaume Tcherkez
- Research School of Biology, ANU Joint College of Sciences, Australian National University, 2601 Canberra ACT, Australia;
- Institut de Recherche en Horticulture et Semences, Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement (INRAe), Université d'Angers, 49070 Beaucouzé, France
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Formyl tetrahydrofolate deformylase affects hydrogen peroxide accumulation and leaf senescence by regulating the folate status and redox homeostasis in rice. SCIENCE CHINA-LIFE SCIENCES 2020; 64:720-738. [DOI: 10.1007/s11427-020-1773-7] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/28/2020] [Accepted: 07/02/2020] [Indexed: 02/06/2023]
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Augustyniak A, Pawłowicz I, Lechowicz K, Izbiańska-Jankowska K, Arasimowicz-Jelonek M, Rapacz M, Perlikowski D, Kosmala A. Freezing Tolerance of Lolium multiflorum/Festuca arundinacea Introgression Forms is Associated with the High Activity of Antioxidant System and Adjustment of Photosynthetic Activity under Cold Acclimation. Int J Mol Sci 2020; 21:ijms21165899. [PMID: 32824486 PMCID: PMC7460622 DOI: 10.3390/ijms21165899] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/04/2020] [Revised: 07/21/2020] [Accepted: 07/25/2020] [Indexed: 12/15/2022] Open
Abstract
Though winter-hardiness is a complex trait, freezing tolerance was proved to be its main component. Species from temperate regions acquire tolerance to freezing in a process of cold acclimation, which is associated with the exposure of plants to low but non-freezing temperatures. However, mechanisms of cold acclimation in Lolium-Festuca grasses, important for forage production in Europe, have not been fully recognized. Thus, two L. multiflorum/F. arundinacea introgression forms with distinct freezing tolerance were used herein as models in the comprehensive research to dissect these mechanisms in that group of plants. The work was focused on: (i) analysis of cellular membranes' integrity; (ii) analysis of plant photosynthetic capacity (chlorophyll fluorescence; gas exchange; gene expression, protein accumulation, and activity of selected enzymes of the Calvin cycle); (iii) analysis of plant antioxidant capacity (reactive oxygen species generation; gene expression, protein accumulation, and activity of selected enzymes); and (iv) analysis of Cor14b accumulation, under cold acclimation. The more freezing tolerant introgression form revealed a higher integrity of membranes, an ability to cold acclimate its photosynthetic apparatus and higher water use efficiency after three weeks of cold acclimation, as well as a higher capacity of the antioxidant system and a lower content of reactive oxygen species in low temperature.
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Affiliation(s)
- Adam Augustyniak
- Institute of Plant Genetics, Polish Academy of Sciences, Strzeszyńska 34, 60-479 Poznań, Poland; (A.A.); (I.P.); (K.L.); (D.P.)
| | - Izabela Pawłowicz
- Institute of Plant Genetics, Polish Academy of Sciences, Strzeszyńska 34, 60-479 Poznań, Poland; (A.A.); (I.P.); (K.L.); (D.P.)
| | - Katarzyna Lechowicz
- Institute of Plant Genetics, Polish Academy of Sciences, Strzeszyńska 34, 60-479 Poznań, Poland; (A.A.); (I.P.); (K.L.); (D.P.)
| | - Karolina Izbiańska-Jankowska
- Department of Plant Ecophysiology, Institute of Experimental Biology, Faculty of Biology, Adam Mickiewicz University, Uniwersytetu Poznańskiego 6, 61-614 Poznań, Poland; (K.I.-J.); (M.A.-J.)
| | - Magdalena Arasimowicz-Jelonek
- Department of Plant Ecophysiology, Institute of Experimental Biology, Faculty of Biology, Adam Mickiewicz University, Uniwersytetu Poznańskiego 6, 61-614 Poznań, Poland; (K.I.-J.); (M.A.-J.)
| | - Marcin Rapacz
- Department of Plant Breeding, Physiology and Seed Science, University of Agriculture in Kraków, Podłużna 3, 30-239 Kraków, Poland;
| | - Dawid Perlikowski
- Institute of Plant Genetics, Polish Academy of Sciences, Strzeszyńska 34, 60-479 Poznań, Poland; (A.A.); (I.P.); (K.L.); (D.P.)
| | - Arkadiusz Kosmala
- Institute of Plant Genetics, Polish Academy of Sciences, Strzeszyńska 34, 60-479 Poznań, Poland; (A.A.); (I.P.); (K.L.); (D.P.)
- Correspondence:
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Hu Y, Zhong S, Zhang M, Liang Y, Gong G, Chang X, Tan F, Yang H, Qiu X, Luo L, Luo P. Potential Role of Photosynthesis in the Regulation of Reactive Oxygen Species and Defence Responses to Blumeria graminis f. sp. tritici in Wheat. Int J Mol Sci 2020; 21:ijms21165767. [PMID: 32796723 PMCID: PMC7460852 DOI: 10.3390/ijms21165767] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/20/2020] [Revised: 08/07/2020] [Accepted: 08/08/2020] [Indexed: 02/07/2023] Open
Abstract
Photosynthesis is not only a primary generator of reactive oxygen species (ROS) but also a component of plant defence. To determine the relationships among photosynthesis, ROS, and defence responses to powdery mildew in wheat, we compared the responses of the Pm40-expressing wheat line L658 and its susceptible sister line L958 at 0, 6, 12, 24, 48, and 72 h post-inoculation (hpi) with powdery mildew via analyses of transcriptomes, cytology, antioxidant activities, photosynthesis, and chlorophyll fluorescence parameters. The results showed that H2O2 accumulation in L658 was significantly greater than that in L958 at 6 and 48 hpi, and the enzymes activity and transcripts expression of peroxidase and catalase were suppressed in L658 compared with L958. In addition, the inhibition of photosynthesis in L658 paralleled the global downregulation of photosynthesis-related genes. Furthermore, the expression of the salicylic acid-related genes non-expressor of pathogenesis related genes 1 (NPR1), pathogenesis-related 1 (PR1), and pathogenesis-related 5 (PR5) was upregulated, while the expression of jasmonic acid- and ethylene-related genes was inhibited in L658 compared with L958. In conclusion, the downregulation of photosynthesis-related genes likely led to a decline in photosynthesis, which may be combined with the inhibition of peroxidase (POD) and catalase (CAT) to generate two stages of H2O2 accumulation. The high level of H2O2, salicylic acid and PR1 and PR5 in L658 possible initiated the hypersensitive response.
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Affiliation(s)
- Yuting Hu
- Provincial Key Laboratory of Plant Breeding and Genetics, College of Agronomy, Sichuan Agricultural University, Chengdu 611130, Sichuan, China; (Y.H.); (S.Z.); (Y.L.); (G.G.); (X.C.); (F.T.); (H.Y.)
- College of Agronomy & Key Laboratory for Major Crop Diseases, Sichuan Agricultural University, Chengdu 611130, Sichuan, China; (X.Q.); (L.L.)
| | - Shengfu Zhong
- Provincial Key Laboratory of Plant Breeding and Genetics, College of Agronomy, Sichuan Agricultural University, Chengdu 611130, Sichuan, China; (Y.H.); (S.Z.); (Y.L.); (G.G.); (X.C.); (F.T.); (H.Y.)
| | - Min Zhang
- College of Agronomy & Key Laboratory for Major Crop Diseases, Sichuan Agricultural University, Chengdu 611130, Sichuan, China; (X.Q.); (L.L.)
- Correspondence: (M.Z.); (P.L.)
| | - Yinping Liang
- Provincial Key Laboratory of Plant Breeding and Genetics, College of Agronomy, Sichuan Agricultural University, Chengdu 611130, Sichuan, China; (Y.H.); (S.Z.); (Y.L.); (G.G.); (X.C.); (F.T.); (H.Y.)
| | - Guoshu Gong
- Provincial Key Laboratory of Plant Breeding and Genetics, College of Agronomy, Sichuan Agricultural University, Chengdu 611130, Sichuan, China; (Y.H.); (S.Z.); (Y.L.); (G.G.); (X.C.); (F.T.); (H.Y.)
| | - Xiaoli Chang
- Provincial Key Laboratory of Plant Breeding and Genetics, College of Agronomy, Sichuan Agricultural University, Chengdu 611130, Sichuan, China; (Y.H.); (S.Z.); (Y.L.); (G.G.); (X.C.); (F.T.); (H.Y.)
| | - Feiquan Tan
- Provincial Key Laboratory of Plant Breeding and Genetics, College of Agronomy, Sichuan Agricultural University, Chengdu 611130, Sichuan, China; (Y.H.); (S.Z.); (Y.L.); (G.G.); (X.C.); (F.T.); (H.Y.)
| | - Huai Yang
- Provincial Key Laboratory of Plant Breeding and Genetics, College of Agronomy, Sichuan Agricultural University, Chengdu 611130, Sichuan, China; (Y.H.); (S.Z.); (Y.L.); (G.G.); (X.C.); (F.T.); (H.Y.)
| | - Xiaoyan Qiu
- College of Agronomy & Key Laboratory for Major Crop Diseases, Sichuan Agricultural University, Chengdu 611130, Sichuan, China; (X.Q.); (L.L.)
| | - Liya Luo
- College of Agronomy & Key Laboratory for Major Crop Diseases, Sichuan Agricultural University, Chengdu 611130, Sichuan, China; (X.Q.); (L.L.)
| | - Peigao Luo
- Provincial Key Laboratory of Plant Breeding and Genetics, College of Agronomy, Sichuan Agricultural University, Chengdu 611130, Sichuan, China; (Y.H.); (S.Z.); (Y.L.); (G.G.); (X.C.); (F.T.); (H.Y.)
- Correspondence: (M.Z.); (P.L.)
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56
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Wang S, Zhang R, Shi Z, Zhao Y, Su A, Wang Y, Xing J, Ge J, Li C, Wang X, Wang J, Sun X, Liu Q, Chen Y, Zhang Y, Wang S, Song W, Zhao J. Identification and Fine Mapping of RppM, a Southern Corn Rust Resistance Gene in Maize. FRONTIERS IN PLANT SCIENCE 2020; 11:1057. [PMID: 32733529 PMCID: PMC7363983 DOI: 10.3389/fpls.2020.01057] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/01/2020] [Accepted: 06/26/2020] [Indexed: 05/26/2023]
Abstract
Southern corn rust (SCR) caused by Puccinia polysora Underw. is a major disease causing severe yield losses during maize production. Here, we identified and mapped the SCR resistance gene RppM from the near-isogenic line Kangxiujing2416 (Jing2416K), which harbors RppM in the genetic background of the susceptible inbred line Jing2416. In this study, the inheritance of SCR resistance was investigated in F2 and F3 populations derived from a cross between Jing2416K and Jing2416. The observed 3:1 segregation ratio of resistant to susceptible plants indicated that the SCR resistance is controlled by a single dominant gene. Using an F2 population, we performed bulked segregant analysis (BSA) sequencing and mapped RppM to a 3.69-Mb region on chromosome arm 10S. To further narrow down the region harboring RppM, we developed 13 insertion/deletion (InDel) markers based on the sequencing data. Finally, RppM was mapped to a region spanning 110-kb using susceptible individuals from a large F2 population. Two genes (Zm00001d023265 and Zm00001d023267) encoding putative CC-NBS-LRR (coiled-coiled, nucleotide-binding site, and leucine-rich repeat) proteins, a common characteristic of R genes, were located in this region (B73 RefGen_v4 reference genome). Sequencing and comparison of the two genes cloned from Jing2416K and Jing2416 revealed sequence variations in their coding regions. The relative expression levels of these two genes in Jing2416K were found to be significantly higher than those in Jing2416. Zm00001d023265 and Zm00001d023267 are thus potential RppM candidates.
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Affiliation(s)
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | - Wei Song
- Maize Research Center, Beijing Academy of Agriculture and Forestry Sciences (BAAFS), Beijing Key Laboratory of Maize DNA Fingerprinting and Molecular Breeding, Beijing, China
| | - Jiuran Zhao
- Maize Research Center, Beijing Academy of Agriculture and Forestry Sciences (BAAFS), Beijing Key Laboratory of Maize DNA Fingerprinting and Molecular Breeding, Beijing, China
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57
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Li R, Zhu F, Duan D. Function analysis and stress-mediated cis-element identification in the promoter region of VqMYB15. PLANT SIGNALING & BEHAVIOR 2020; 15:1773664. [PMID: 32475217 PMCID: PMC8570707 DOI: 10.1080/15592324.2020.1773664] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/10/2020] [Revised: 05/17/2020] [Accepted: 05/19/2020] [Indexed: 05/21/2023]
Abstract
The transcription factor MYB15 plays an important role in grape basal immunity, and its promoter can be used as a potential target in resistance breeding. However, the regulatory mechanisms of cis-elements in its promoter region under a variety of stresses remain unclear. In this study, we identified some putative cis-regulatory elements present upstream of MYB15 in Vitis quinquangularis Shanyang (pVqMYB15_SY) and subsequently characterized the function of these elements using reporter assays. Our results showed that TCA-elements 1 and 2, ABRE, MYC and 3-AF1 binding site 1 are key cis-regulatory elements in pVqMYB15_SY and play important roles in plant bio/abiotic stress resistance.
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Affiliation(s)
- Ruixiang Li
- Key Laboratory of Resource Biology and Biotechnology in Western China, Ministry of Education, College of Life Sciences, Northwest University, Xi’an, China
| | - Fanding Zhu
- Key Laboratory of Resource Biology and Biotechnology in Western China, Ministry of Education, College of Life Sciences, Northwest University, Xi’an, China
| | - Dong Duan
- Key Laboratory of Resource Biology and Biotechnology in Western China, Ministry of Education, College of Life Sciences, Northwest University, Xi’an, China
- CONTACT Dong Duan Key Laboratory of Resource Biology and Biotechnology in Western China, Ministry of Education, College of Life Sciences, Northwest University, Xi’an710069, China
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Lv Y, Xu J, Xu K, Liu X, Guo X, Lu S, Xi B. Accumulation characteristics and biological response of ginger to sulfamethoxazole and ofloxacin. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2020; 262:114203. [PMID: 32179230 DOI: 10.1016/j.envpol.2020.114203] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/08/2019] [Revised: 01/27/2020] [Accepted: 02/16/2020] [Indexed: 06/10/2023]
Abstract
The potential risk to human health of antibiotics that pass through the food chain has become an important global issue, but there are few reports on the response of ginger (Zingiber officinale) to antibiotic pollution. In this study, we investigated the enrichment characteristics and biological response of ginger to sulfamethoxazole (SMZ) and ofloxacin (OFL) residues, which are common in the environment. Lower levels of SMZ, OFL and their combined duplex treatment (SMZ+OFL) promoted the growth of ginger, but the critical doses necessary to stimulate growth differed among treatments: 10 mg L-1 SMZ, 1 mg L-1 OFL and 1 mg L-1 (SMZ+OFL) had the strongest stimulating effects. At higher dosages, the root growth and light energy utilization efficiency of ginger were impaired, and (SMZ+OFL) had the strongest inhibitory effect. Treatments with lower levels of antibiotics had no significant effect on reactive oxygen species and antioxidant enzyme activities. However, when SMZ, OFL and SMZ+OFL concentrations exceeded 10 mg L-1, the contents of H2O2, O2- and MDA continued to increase, while the activities of SOD, POD, CAT first increased and then decreased, especially in SMZ+OFL. Ginger accumulated more SMZ and OFL in rhizomes and less in leaves, and accumulation increased significantly as antibiotic concentration increased. When SMZ concentration was 1 mg L-1, the SMZ concentrations in rhizomes, roots, and leaves were 0.23, 0.15, and 0.05 mg kg-1, respectively, and the residual SMZ in the rhizome was 2.3 times higher than the maximum residue limit. The abundance of the resistance genes sul1, sul2, qnrS, and intI1 increased with increasing antibiotic concentrations, and intI1 abundance was the highest. OFL induced higher levels of intI1 expression than did SMZ.
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Affiliation(s)
- Yao Lv
- College of Horticulture Science and Engineering, Shandong Agricultural University, Taian 271018, China
| | - Jiamin Xu
- State Environmental Protection Scientific Observation and Research Station for Lake Dongtinghu (SEPSORSLD), National Engineering Laboratory for Lake Pollution Control and Ecological Restoration, State Key Laboratory of Environmental Criteria an Risk Assessment, Research Centre of Lake Environment, Chinese Research Academy of Environmental Sciences, Beijing 100012, China
| | - Kun Xu
- College of Horticulture Science and Engineering, Shandong Agricultural University, Taian 271018, China.
| | - Xiaohui Liu
- State Environmental Protection Scientific Observation and Research Station for Lake Dongtinghu (SEPSORSLD), National Engineering Laboratory for Lake Pollution Control and Ecological Restoration, State Key Laboratory of Environmental Criteria an Risk Assessment, Research Centre of Lake Environment, Chinese Research Academy of Environmental Sciences, Beijing 100012, China; School of Environment, Tsinghua University, Beijing 100084, China
| | - Xiaochun Guo
- State Environmental Protection Scientific Observation and Research Station for Lake Dongtinghu (SEPSORSLD), National Engineering Laboratory for Lake Pollution Control and Ecological Restoration, State Key Laboratory of Environmental Criteria an Risk Assessment, Research Centre of Lake Environment, Chinese Research Academy of Environmental Sciences, Beijing 100012, China
| | - Shaoyong Lu
- State Environmental Protection Scientific Observation and Research Station for Lake Dongtinghu (SEPSORSLD), National Engineering Laboratory for Lake Pollution Control and Ecological Restoration, State Key Laboratory of Environmental Criteria an Risk Assessment, Research Centre of Lake Environment, Chinese Research Academy of Environmental Sciences, Beijing 100012, China
| | - Beidou Xi
- State Environmental Protection Scientific Observation and Research Station for Lake Dongtinghu (SEPSORSLD), National Engineering Laboratory for Lake Pollution Control and Ecological Restoration, State Key Laboratory of Environmental Criteria an Risk Assessment, Research Centre of Lake Environment, Chinese Research Academy of Environmental Sciences, Beijing 100012, China
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Nehela Y, Killiny N. The unknown soldier in citrus plants: polyamines-based defensive mechanisms against biotic and abiotic stresses and their relationship with other stress-associated metabolites. PLANT SIGNALING & BEHAVIOR 2020; 15:1761080. [PMID: 32408848 PMCID: PMC8570725 DOI: 10.1080/15592324.2020.1761080] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/04/2020] [Revised: 04/20/2020] [Accepted: 04/21/2020] [Indexed: 05/07/2023]
Abstract
Citrus plants are challenged by a broad diversity of abiotic and biotic stresses, which definitely alter their growth, development, and productivity. In order to survive the various stressful conditions, citrus plants relay on multi-layered adaptive strategies, among which is the accumulation of stress-associated metabolites that play vital and complex roles in citrus defensive responses. These metabolites included amino acids, organic acids, fatty acids, phytohormones, polyamines (PAs), and other secondary metabolites. However, the contribution of PAs pathways in citrus defense responses is poorly understood. In this review article, we will discuss the recent metabolic, genetic, and molecular evidence illustrating the potential roles of PAs in citrus defensive responses against biotic and abiotic stressors. We believe that PAs-based defensive role, against biotic and abiotic stress in citrus, is involving the interaction with other stress-associated metabolites, particularly phytohormones. The knowledge gained so far about PAs-based defensive responses in citrus underpins our need for further genetic manipulation of PAs biosynthetic genes to produce transgenic citrus plants with modulated PAs content that may enhance the tolerance of citrus plants against stressful conditions. In addition, it provides valuable information for the potential use of PAs or their synthetic analogs and their emergence as a promising approach to practical applications in citriculture to enhance stress tolerance in citrus plants.
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Affiliation(s)
- Yasser Nehela
- Citrus Research and Education Center and Department of Plant Pathology, IFAS, University of Florida, Lake Alfred, FL, USA
| | - Nabil Killiny
- Citrus Research and Education Center and Department of Plant Pathology, IFAS, University of Florida, Lake Alfred, FL, USA
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Abstract
Rising CO2 concentrations and their effects on plant productivity present challenging issues. Effects on the photosynthesis/photorespiration balance and changes in primary metabolism are known, caused by the competitive interaction of CO2 and O2 at the active site of ribulose-1,5-bisphosphate carboxylase/oxygenase. However, impacts on stress resistance are less clear. Reactive oxygen species are key players in biotic and abiotic stress responses, but there is no consensus on whether elevated CO2 constitutes a stress. Although high CO2 increases yield in C3 plants, it can also increase cellular oxidation and activate phytohormone defense pathways. Reduction-oxidation processes play key roles in acclimation to high CO2, with specific enzymes acting in compartment-specific signaling. Traditionally, acclimation to high CO2 has been considered in terms of altered carbon gain, but emerging evidence suggests that CO2 is a signal as well as a substrate. Some CO2 effects on defense are likely mediated independently of primary metabolism. Nonetheless, primary photosynthetic metabolism is highly integrated with defense and stress signaling pathways, meaning that plants will be able to acclimate to the changing environment over the coming decades.
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Affiliation(s)
- Christine H Foyer
- School of Biosciences, College of Life and Environmental Sciences, University of Birmingham, Edgbaston B15 2TT, United Kingdom;
| | - Graham Noctor
- Université Paris-Saclay, CNRS, INRAE, Université d'Evry, Institute of Plant Sciences Paris-Saclay (IPS2), 91405 Orsay, France;
- Université de Paris, CNRS, INRAE, Institute of Plant Sciences Paris-Saclay (IPS2), 91405 Orsay, France
- Institut Universitaire de France (IUF)
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Differential Accumulation of Innate- and Adaptive-Immune-Response-Derived Transcripts during Antagonism between Papaya Ringspot Virus and Papaya Mosaic Virus. Viruses 2020; 12:v12020230. [PMID: 32092910 PMCID: PMC7077339 DOI: 10.3390/v12020230] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2019] [Revised: 01/19/2020] [Accepted: 01/20/2020] [Indexed: 02/06/2023] Open
Abstract
Papaya ringspot virus (PRSV), a common potyvirus infecting papaya plants worldwide, can lead to either antagonism or synergism in mixed infections with Papaya mosaic virus (PapMV), a potexvirus. These two unrelated viruses produce antagonism or synergism depending on their order of infection in the plant. When PRSV is inoculated first or at the same time as PapMV, the viral interaction is synergistic. However, an antagonistic response is observed when PapMV is inoculated before PRSV. In the antagonistic condition, PRSV is deterred from the plant and its drastic effects are overcome. Here, we examine differences in gene expression by high-throughput RNA sequencing, focused on immune system pathways. We present the transcriptomic expression of single and mixed inoculations of PRSV and PapMV leading to synergism and antagonism. Upregulation of dominant and hormone-mediated resistance transcripts suggests that the innate immune system participates in synergism. In antagonism, in addition to innate immunity, upregulation of RNA interference-mediated resistance transcripts suggests that adaptive immunity is involved.
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A common wild rice-derived BOC1 allele reduces callus browning in indica rice transformation. Nat Commun 2020; 11:443. [PMID: 31974373 PMCID: PMC6978460 DOI: 10.1038/s41467-019-14265-0] [Citation(s) in RCA: 29] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/29/2019] [Accepted: 12/20/2019] [Indexed: 12/22/2022] Open
Abstract
Callus browning, a common trait derived from the indica rice cultivar (Oryza sativa L.), is a challenge to transformation regeneration. Here, we report the map-based cloning of BROWNING OF CALLUS1 (BOC1) using a population derived from crossing Teqing, an elite indica subspecies exhibiting callus browning, and Yuanjiang, a common wild rice accession (Oryza rufipogon Griff.) that is less susceptible to callus browning. We show that BOC1 encodes a SIMILAR TO RADICAL-INDUCED CELL DEATH ONE (SRO) protein. Callus browning can be reduced by appropriate upregulation of BOC1, which consequently improves the genetic transformation efficiency. The presence of a Tourist-like miniature inverted-repeat transposable element (Tourist MITE) specific to wild rice in the promoter of BOC1 increases the expression of BOC1 in callus. BOC1 may decrease cell senescence and death caused by oxidative stress. Our study provides a gene target for improving tissue culturability and genetic transformation. Callus browning heavily affects indica rice transformation regeneration. Here, the authors show transposon insertion in the promoter of BOC1 gene, encoding a SIMILAR TO RADICAL-INDUCED CELL DEATH ONE protein, can upregulate its expression and decrease callus browning in cultivated rice by releasing oxidative stress.
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Transcriptome analysis of Actinidia chinensis in response to Botryosphaeria dothidea infection. PLoS One 2020; 15:e0227303. [PMID: 31914162 PMCID: PMC6948751 DOI: 10.1371/journal.pone.0227303] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/29/2019] [Accepted: 12/16/2019] [Indexed: 11/26/2022] Open
Abstract
Ripe rot caused by Botryosphaeria dothidea causes extensive production losses in kiwifruit (Actinidia chinensis Planch.). Our previous study showed that kiwifruit variety “Jinyan” is resistant to B. dothidea while “Hongyang” is susceptible. For a comparative analysis of the response of these varieties to B. dothidea infection, we performed a transcriptome analysis by RNA sequencing. A total of 305.24 Gb of clean bases were generated from 36 libraries of which 175.76 Gb was from the resistant variety and 129.48 Gb from the susceptible variety. From the libraries generated, we identified 44,656 genes including 39,041 reference genes, 5,615 novel transcripts, and 13,898 differentially expressed genes (DEGs). Among these, 2,373 potentially defense-related genes linked to calcium signaling, mitogen-activated protein kinase (MAPK), cell wall modification, phytoalexin synthesis, transcription factors, pattern-recognition receptors, and pathogenesis-related proteins may regulate kiwifruit resistance to B. dothidea. DEGs involved in calcium signaling, MAPK, and cell wall modification in the resistant variety were induced at an earlier stage and at higher levels compared with the susceptible variety. Thirty DEGs involved in plant defense response were strongly induced in the resistant variety at all three time points. This study allowed the first comprehensive understanding of kiwifruit transcriptome in response to B. dothidea and may help identify key genes required for ripe rot resistance in kiwifruit.
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Mukherjee S, Jemielita M, Stergioula V, Tikhonov M, Bassler BL. Photosensing and quorum sensing are integrated to control Pseudomonas aeruginosa collective behaviors. PLoS Biol 2019; 17:e3000579. [PMID: 31830037 PMCID: PMC6932827 DOI: 10.1371/journal.pbio.3000579] [Citation(s) in RCA: 37] [Impact Index Per Article: 7.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/10/2019] [Revised: 12/26/2019] [Accepted: 11/26/2019] [Indexed: 01/28/2023] Open
Abstract
Bacteria convert changes in sensory inputs into alterations in gene expression, behavior, and lifestyles. A common lifestyle choice that bacteria make is whether to exhibit individual behavior and exist in the free-living planktonic state or to engage in collective behavior and form sessile communities called biofilms. Transitions between individual and collective behaviors are controlled by the chemical cell-to-cell communication process called quorum sensing. Here, we show that quorum sensing represses Pseudomonas aeruginosa biofilm formation and virulence by activating expression of genes encoding the KinB–AlgB two-component system (TCS). Phospho-AlgB represses biofilm and virulence genes, while KinB dephosphorylates and thereby inactivates AlgB. We discover that the photoreceptor BphP is the kinase that, in response to light, phosphorylates and activates AlgB. Indeed, exposing P. aeruginosa to light represses biofilm formation and virulence gene expression. To our knowledge, P. aeruginosa was not previously known to detect and respond to light. The KinB–AlgB–BphP module is present in all pseudomonads, and we demonstrate that AlgB is the partner response regulator for BphP in diverse bacterial phyla. We propose that in the KinB–AlgB–BphP system, AlgB functions as the node at which varied sensory information is integrated. This network architecture provides a mechanism enabling bacteria to integrate at least two different sensory inputs, quorum sensing (via RhlR-driven activation of algB) and light (via BphP–AlgB), into the control of collective behaviors. This study sets the stage for light-mediated control of P. aeruginosa infectivity. Photosensing and quorum sensing are integrated to control collective behaviors of the pathogenic bacterium Pseudomonas aeruginosa; the information is transduced via a phosphorylation–dephosphorylation sensory system. The study has implications for light-mediated control of P. aeruginosa infectivity.
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Affiliation(s)
- Sampriti Mukherjee
- Department of Molecular Biology, Princeton University, Princeton, New Jersey, United States of America
| | - Matthew Jemielita
- Department of Molecular Biology, Princeton University, Princeton, New Jersey, United States of America
| | - Vasiliki Stergioula
- Department of Molecular Biology, Princeton University, Princeton, New Jersey, United States of America
| | - Mikhail Tikhonov
- Physics Department, Washington University in St. Louis, St. Louis, Missouri, United States of America
| | - Bonnie L. Bassler
- Department of Molecular Biology, Princeton University, Princeton, New Jersey, United States of America
- Howard Hughes Medical Institute, Chevy Chase, Maryland, United States of America
- * E-mail:
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Wang S, Chen Z, Tian L, Ding Y, Zhang J, Zhou J, Liu P, Chen Y, Wu L. Comparative proteomics combined with analyses of transgenic plants reveal ZmREM1.3 mediates maize resistance to southern corn rust. PLANT BIOTECHNOLOGY JOURNAL 2019; 17:2153-2168. [PMID: 30972847 PMCID: PMC6790363 DOI: 10.1111/pbi.13129] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/16/2018] [Revised: 03/08/2019] [Accepted: 04/02/2019] [Indexed: 05/25/2023]
Abstract
Southern corn rust (SCR), which is a destructive disease caused by Puccinia polysora Underw. (P. polysora), commonly occurs in warm-temperate and tropical regions. To identify candidate proteins related to SCR resistance and characterize the molecular mechanisms underlying the maize-P. polysora interaction, a comparative proteomic analysis of susceptible and resistant maize lines was performed. Statistical analyses revealed 1489 differentially abundant proteins in the resistant line, as well as 1035 differentially abundant proteins in the susceptible line. After the P. polysora infection, the abundance of one remorin protein (ZmREM1.3) increased in the resistant genotype, but decreased in the susceptible genotype. Plant-specific remorins are important for responses to microbial infections as well as plant signalling processes. In this study, transgenic maize plants overexpressing ZmREM1.3 exhibited enhanced resistance to the biotrophic P. polysora. In contrast, homozygous ZmREM1.3 UniformMu mutant plants were significantly more susceptible to P. polysora than wild-type plants. Additionally, the ZmREM1.3-overexpressing plants accumulated more salicylic acid (SA) and jasmonic acid (JA). Moreover, the expression levels of defence-related genes were higher in ZmREM1.3-overexpressing maize plants than in non-transgenic control plants in response to the P. polysora infection. Overall, our results provide evidence that ZmREM1.3 positively regulates maize defences against P. polysora likely via SA/JA-mediated defence signalling pathways. This study represents the first large-scale proteomic analysis of the molecular mechanisms underlying the maize-P. polysora interaction. This is also the first report confirming the remorin protein family affects plant resistance to SCR.
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Affiliation(s)
- Shunxi Wang
- Synergetic Innovation Center of Henan Grain CropsHenan Agricultural UniversityZhengzhouChina
- Key Laboratory of Physiological Ecology and Genetic Improvement of Food Crops in Henan ProvinceZhengzhouChina
| | - Zan Chen
- Synergetic Innovation Center of Henan Grain CropsHenan Agricultural UniversityZhengzhouChina
- Key Laboratory of Physiological Ecology and Genetic Improvement of Food Crops in Henan ProvinceZhengzhouChina
| | - Lei Tian
- Synergetic Innovation Center of Henan Grain CropsHenan Agricultural UniversityZhengzhouChina
- Key Laboratory of Physiological Ecology and Genetic Improvement of Food Crops in Henan ProvinceZhengzhouChina
| | - Yezhang Ding
- Section of Cell and Developmental BiologyUniversity of California at San DiegoLa JollaCAUSA
| | - Jun Zhang
- Cereal Crop Research InstituteHenan Academy of Agricultural SciencesZhengzhouChina
| | - Jinlong Zhou
- Synergetic Innovation Center of Henan Grain CropsHenan Agricultural UniversityZhengzhouChina
- Key Laboratory of Physiological Ecology and Genetic Improvement of Food Crops in Henan ProvinceZhengzhouChina
| | - Ping Liu
- Synergetic Innovation Center of Henan Grain CropsHenan Agricultural UniversityZhengzhouChina
- Key Laboratory of Physiological Ecology and Genetic Improvement of Food Crops in Henan ProvinceZhengzhouChina
| | - Yanhui Chen
- Synergetic Innovation Center of Henan Grain CropsHenan Agricultural UniversityZhengzhouChina
- Key Laboratory of Physiological Ecology and Genetic Improvement of Food Crops in Henan ProvinceZhengzhouChina
| | - Liuji Wu
- Synergetic Innovation Center of Henan Grain CropsHenan Agricultural UniversityZhengzhouChina
- Key Laboratory of Physiological Ecology and Genetic Improvement of Food Crops in Henan ProvinceZhengzhouChina
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Makowski W, Tokarz B, Banasiuk R, Królicka A, Dziurka M, Wojciechowska R, Tokarz KM. Is a blue-red light a good elicitor of phenolic compounds in the family Droseraceae? A comparative study. JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY B-BIOLOGY 2019; 201:111679. [PMID: 31710926 DOI: 10.1016/j.jphotobiol.2019.111679] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/01/2019] [Revised: 07/23/2019] [Accepted: 10/30/2019] [Indexed: 01/14/2023]
Abstract
Plants from the family Droseraceae, especially Drosera sp. and Dionaea sp., are naturally rich in phenolic derivatives such as plumbagin, among others. Plumbagin is known both for its pharmacological significance and its protective properties against light stress. Light stress - high light intensity or/and light spectral composition - activates plants' response mechanisms including, among others, hormonal (salicylic acid, jasmonic acid) pathways and secondary metabolite (phenolic compounds, proline) pathways. Short-wavelength radiation, due to its high energy, will induce the synthesis of protective secondary metabolites, including those with pharmaceutical properties. The aim of the study was to describe and compare acclimation strategies of Drosera peltata and Dionaea muscipula to blue-red light in the context of phenolic compound accumulation, and salicylic acid, jasmonic acid and proline synthesis. For the first time, differences in the responses of D. muscipula and D. peltata to blue-red light (in the ratio 6:1) were established. In Dionaea sp., it was associated with the use of redox equivalents (in particular, plastoquinone pool) for the synthesis of primary metabolites used in the process of growth and development. In Drosera sp., a rapid adjustment of redox state led to the synthesis of secondary metabolites, constituting a reservoir of carbon skeletons and allowing for a quick defence response to stress factors. In both species, blue-red light did not induce the jasmonic acid pathway. However, the salicylic acid pathway was induced as an alternative to the phenolic compound synthesis pathway. Nevertheless, the applied blue-red light was not an effective elicitor of phenolic compounds in the plants examined.
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Affiliation(s)
- Wojciech Makowski
- Unit of Botany and Plant Physiology, Institute of Plant Biology and Biotechnology, Faculty of Biotechnology and Horticulture, University of Agriculture in Krakow, 29 Listopada 54, 31-425 Krakow, Poland
| | - Barbara Tokarz
- Unit of Botany and Plant Physiology, Institute of Plant Biology and Biotechnology, Faculty of Biotechnology and Horticulture, University of Agriculture in Krakow, 29 Listopada 54, 31-425 Krakow, Poland
| | - Rafał Banasiuk
- Institute of Biotechnology and Molecular Medicine, Trzy Lipy 3, 80-172 Gdansk, Poland
| | - Aleksandra Królicka
- University of Gdansk, Intercollegiate Faculty of Biotechnology UG and MUG, Laboratory of Biologically Active Compounds, Abrahama 58, 80-307 Gdansk, Poland
| | - Michał Dziurka
- The Franciszek Górski Institute of Plant Physiology Polish Academy of Science, Niezapominajek 21, 30-239 Krakow, Poland
| | - Renata Wojciechowska
- Unit of Botany and Plant Physiology, Institute of Plant Biology and Biotechnology, Faculty of Biotechnology and Horticulture, University of Agriculture in Krakow, 29 Listopada 54, 31-425 Krakow, Poland
| | - Krzysztof M Tokarz
- Unit of Botany and Plant Physiology, Institute of Plant Biology and Biotechnology, Faculty of Biotechnology and Horticulture, University of Agriculture in Krakow, 29 Listopada 54, 31-425 Krakow, Poland.
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Cerqueira JVA, Silveira JAG, Carvalho FEL, Cunha JR, Lima Neto MC. The regulation of P700 is an important photoprotective mechanism to NaCl-salinity in Jatropha curcas. PHYSIOLOGIA PLANTARUM 2019; 167:404-417. [PMID: 30737801 DOI: 10.1111/ppl.12908] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/04/2018] [Revised: 12/10/2018] [Accepted: 12/12/2018] [Indexed: 05/11/2023]
Abstract
Salinity commonly affects photosynthesis and crop production worldwide. Salt stress disrupts the fine balance between photosynthetic electron transport and the Calvin cycle reactions, leading to over-reduction and excess energy within the thylakoids. The excess energy triggers reactive oxygen species (ROS) overproduction that causes photoinhibition in both photosystems (PS) I and II. However, the role of PSI photoinhibition and its physiological mechanisms for photoprotection have not yet been fully elucidated. In the present study, we analyzed the effects of 15 consecutive days of 100 mM NaCl in Jatropha curcas plants, primarily focusing on the photosynthetic electron flow at PSI level. We found that J. curcas plants have important photoprotective mechanisms to cope with the harmful effects of salinity. We show that maintaining P700 in an oxidized state is an important photoprotector mechanism, avoiding ROS burst in J. curcas exposed to salinity. In addition, upon photoinhibition of PSI, the highly reduced electron transport chain triggers a significant increase in H2 O2 content which can lead to the production of hydroxyl radical by Mehler reactions in chloroplast, thereby increasing PSI photoinhibition.
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Affiliation(s)
- João V A Cerqueira
- Department of Molecular Biology and Biochemistry, Federal University of Ceará, Fortaleza, 60440-970, Brazil
| | - Joaquim A G Silveira
- Department of Molecular Biology and Biochemistry, Federal University of Ceará, Fortaleza, 60440-970, Brazil
| | - Fabrício E L Carvalho
- Department of Molecular Biology and Biochemistry, Federal University of Ceará, Fortaleza, 60440-970, Brazil
| | - Juliana R Cunha
- Department of Molecular Biology and Biochemistry, Federal University of Ceará, Fortaleza, 60440-970, Brazil
| | - Milton C Lima Neto
- Bioscience Institute, São Paulo State University (UNESP), São Vicente, 11330-900, Brazil
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68
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Babla M, Cai S, Chen G, Tissue DT, Cazzonelli CI, Chen ZH. Molecular Evolution and Interaction of Membrane Transport and Photoreception in Plants. Front Genet 2019; 10:956. [PMID: 31681411 PMCID: PMC6797626 DOI: 10.3389/fgene.2019.00956] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/03/2018] [Accepted: 09/06/2019] [Indexed: 12/20/2022] Open
Abstract
Light is a vital regulator that controls physiological and cellular responses to regulate plant growth, development, yield, and quality. Light is the driving force for electron and ion transport in the thylakoid membrane and other membranes of plant cells. In different plant species and cell types, light activates photoreceptors, thereby modulating plasma membrane transport. Plants maximize their growth and photosynthesis by facilitating the coordinated regulation of ion channels, pumps, and co-transporters across membranes to fine-tune nutrient uptake. The signal-transducing functions associated with membrane transporters, pumps, and channels impart a complex array of mechanisms to regulate plant responses to light. The identification of light responsive membrane transport components and understanding of their potential interaction with photoreceptors will elucidate how light-activated signaling pathways optimize plant growth, production, and nutrition to the prevailing environmental changes. This review summarizes the mechanisms underlying the physiological and molecular regulations of light-induced membrane transport and their potential interaction with photoreceptors in a plant evolutionary and nutrition context. It will shed new light on plant ecological conservation as well as agricultural production and crop quality, bringing potential nutrition and health benefits to humans and animals.
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Affiliation(s)
- Mohammad Babla
- School of Science and Health, Western Sydney University, Penrith, NSW, Australia
| | - Shengguan Cai
- School of Science and Health, Western Sydney University, Penrith, NSW, Australia
- College of Agriculture and Biotechnology, Zhejiang University, Hangzhou, China
| | - Guang Chen
- College of Agriculture and Biotechnology, Zhejiang University, Hangzhou, China
| | - David T. Tissue
- Hawkesbury Institute for the Environment, Western Sydney University, Penrith, NSW, Australia
| | | | - Zhong-Hua Chen
- School of Science and Health, Western Sydney University, Penrith, NSW, Australia
- Hawkesbury Institute for the Environment, Western Sydney University, Penrith, NSW, Australia
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Dehigaspitiya P, Milham P, Ash GJ, Arun-Chinnappa K, Gamage D, Martin A, Nagasaka S, Seneweera S. Exploring natural variation of photosynthesis in a site-specific manner: evolution, progress, and prospects. PLANTA 2019; 250:1033-1050. [PMID: 31254100 DOI: 10.1007/s00425-019-03223-1] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/27/2019] [Accepted: 06/20/2019] [Indexed: 06/09/2023]
Abstract
Site-specific changes of photosynthesis, a relatively new concept, can be used to improve the productivity of critical food crops to mitigate the foreseen food crisis. Global food security is threatened by an increasing population and the effects of climate change. Large yield improvements were achieved in major cereal crops between the 1950s and 1980s through the Green Revolution. However, we are currently experiencing a significant decline in yield progress. Of the many approaches to improved cereal yields, exploitation of the mode of photosynthesis has been intensely studied. Even though the C4 pathway is considered the most efficient, mainly because of the carbon concentrating mechanisms around the enzyme ribulose-1,5-bisphosphate carboxylase/oxygenase, which minimize photorespiration, much is still unknown about the specific gene regulation of this mode of photosynthesis. Most of the critical cereal crops, including wheat and rice, are categorized as C3 plants based on the photosynthesis of major photosynthetic organs. However, recent findings raise the possibility of different modes of photosynthesis occurring at different sites in the same plant and/or in plants grown in different habitats. That is, it seems possible that efficient photosynthetic traits may be expressed in specific organs, even though the major photosynthetic pathway is C3. Knowledge of site-specific differences in photosynthesis, coupled with site-specific regulation of gene expression, may therefore hold a potential to enhance the yields of economically important C3 crops.
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Affiliation(s)
| | - Paul Milham
- Hawkesbury Institute for the Environment, Western Sydney University, LB 1797, Penrith, NSW, 2753, Australia
| | - Gavin J Ash
- Centre for Crop Health, University of Southern Queensland, Toowoomba, QLD, 4350, Australia
| | - Kiruba Arun-Chinnappa
- Centre for Crop Health, University of Southern Queensland, Toowoomba, QLD, 4350, Australia
| | - Dananjali Gamage
- Centre for Crop Health, University of Southern Queensland, Toowoomba, QLD, 4350, Australia
| | - Anke Martin
- Centre for Crop Health, University of Southern Queensland, Toowoomba, QLD, 4350, Australia
| | - Seiji Nagasaka
- Centre for Crop Health, University of Southern Queensland, Toowoomba, QLD, 4350, Australia
| | - Saman Seneweera
- Centre for Crop Health, University of Southern Queensland, Toowoomba, QLD, 4350, Australia.
- National Institute of Fundamental Studies, Hanthana Road, Kandy, 20000, Central, Sri Lanka.
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70
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González B, Vera P. Folate Metabolism Interferes with Plant Immunity through 1C Methionine Synthase-Directed Genome-wide DNA Methylation Enhancement. MOLECULAR PLANT 2019; 12:1227-1242. [PMID: 31077872 DOI: 10.1016/j.molp.2019.04.013] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/03/2018] [Revised: 03/26/2019] [Accepted: 04/23/2019] [Indexed: 05/25/2023]
Abstract
Plants rely on primary metabolism for flexible adaptation to environmental changes. Here, through a combination of chemical genetics and forward genetic studies in Arabidopsis plants, we identified that the essential folate metabolic pathway exerts a salicylic acid-independent negative control on plant immunity. Disruption of the folate pathway promotes enhanced resistance to Pseudomonas syringae DC3000 via activation of a primed immune state in plants, whereas its implementation results in enhanced susceptibility. Comparative proteomics analysis using immune-defective mutants identified a methionine synthase (METS1), in charge of the synthesis of Met through the folate-dependent 1C metabolism, acting as a nexus between the folate pathway and plant immunity. Overexpression of METS1 represses plant immunity and is accompanied by genome-wide global increase in DNA methylation, revealing that imposing a methylation pressure at the genomic level compromises plant immunity. Take together, these results indicate that the folate pathway represents a new layer of complexity in the regulation of plant defense responses.
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Affiliation(s)
- Beatriz González
- Instituto de Biología Molecular y Celular de Plantas, Universidad Politécnica de Valencia-C.S.I.C, Ciudad Politécnica de la Innovación, Edificio 8E, Ingeniero Fausto Elio, s/n, 46022 Valencia, Spain
| | - Pablo Vera
- Instituto de Biología Molecular y Celular de Plantas, Universidad Politécnica de Valencia-C.S.I.C, Ciudad Politécnica de la Innovación, Edificio 8E, Ingeniero Fausto Elio, s/n, 46022 Valencia, Spain.
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Ye ZP, Liu YG, Kang HJ, Duan HL, Chen XM, Zhou SX. Comparing two measures of leaf photorespiration rate across a wide range of light intensities. JOURNAL OF PLANT PHYSIOLOGY 2019; 240:153002. [PMID: 31254740 DOI: 10.1016/j.jplph.2019.153002] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/01/2018] [Revised: 06/17/2019] [Accepted: 06/17/2019] [Indexed: 06/09/2023]
Abstract
Suppression of photorespiration by low O2 concentrations (Method 1) and simultaneous measurements of gas exchange and chlorophyll fluorescence (Method 2) are often used to estimate leaf photorespiration rate (Rp) of C3 plants. However, it is largely unknown whether Method 1 and Method 2 can be used equivalently in estimating Rp. Using a field experiment on two wheat cultivars (T. aestivum JM22 and T. aestivum Z39-118) whose leaf gas exchange and chlorophyll fluorescence at low and normal O2 concentrations (2% versus 21% O2) were simultaneously measured across a wide range of light intensities (I), this study assessed the impacts of the two measures on Rp and its response under changing irradiance conditions. All the above quantities increased with the increasing I until reaching the cultivar-specific maximum values and the corresponding saturation light intensities. However, there were significant differences between Rp estimated by Method 1 and Method 2 at the I range from 150 to 2000 μmol m-2 s-1 for T. aestivum JM22 and from 150 to 1000 μmol m-2 s-1 for T. aestivum Z39-118. These findings demonstrated that the two methods cannot be used equivalently under changing irradiance conditions.
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Affiliation(s)
- Zi-Piao Ye
- Maths and Physics College, Jinggangshan University, Ji'an 343009, Jiangxi, China
| | - Yu-Guo Liu
- Institute of Desertification Studies, Chinese Academy of Forestry, Beijing 100091, China
| | - Hua-Jing Kang
- Wenzhou Vocational College of Science and Technology, Wenzhou 325006, Zhejiang, China
| | - Hong-Lang Duan
- Jiangxi Provincial Key Laboratory for Restoration of Degraded Ecosystems & Watershed Ecohydrology, Nanchang Institute of Technology, Nanchang 330099, China
| | - Xian-Mao Chen
- Soil Fertilizer and Environmental Resources Institute, Jiangxi Academy of Agricultural Sciences, Nanchang 330200, Jiangxi, China.
| | - Shuang-Xi Zhou
- The New Zealand Institute for Plant and Food Research Limited, Hawke's Bay 4130, New Zealand.
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Klem K, Gargallo-Garriga A, Rattanapichai W, Oravec M, Holub P, Veselá B, Sardans J, Peñuelas J, Urban O. Distinct Morphological, Physiological, and Biochemical Responses to Light Quality in Barley Leaves and Roots. FRONTIERS IN PLANT SCIENCE 2019; 10:1026. [PMID: 31475023 PMCID: PMC6703096 DOI: 10.3389/fpls.2019.01026] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/06/2019] [Accepted: 07/23/2019] [Indexed: 05/04/2023]
Abstract
Light quality modulates plant growth, development, physiology, and metabolism through a series of photoreceptors perceiving light signal and related signaling pathways. Although the partial mechanisms of the responses to light quality are well understood, how plants orchestrate these impacts on the levels of above- and below-ground tissues and molecular, physiological, and morphological processes remains unclear. However, the re-allocation of plant resources can substantially adjust plant tolerance to stress conditions such as reduced water availability. In this study, we investigated in two spring barley genotypes the effect of ultraviolet-A (UV-A), blue, red, and far-red light on morphological, physiological, and metabolic responses in leaves and roots. The plants were grown in growth units where the root system develops on black filter paper, placed in growth chambers. While the growth of above-ground biomass and photosynthetic performance were enhanced mainly by the combined action of red, blue, far-red, and UV-A light, the root growth was stimulated particularly by supplementary far-red light to red light. Exposure of plants to the full light spectrum also stimulates the accumulation of numerous compounds related to stress tolerance such as proline, secondary metabolites with antioxidative functions or jasmonic acid. On the other hand, full light spectrum reduces the accumulation of abscisic acid, which is closely associated with stress responses. Addition of blue light induced accumulation of γ-aminobutyric acid (GABA), sorgolactone, or several secondary metabolites. Because these compounds play important roles as osmolytes, antioxidants, UV screening compounds, or growth regulators, the importance of light quality in stress tolerance is unequivocal.
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Affiliation(s)
- Karel Klem
- Global Change Research Institute, Czech Academy of Sciences, Brno, Czechia
| | - Albert Gargallo-Garriga
- Global Change Research Institute, Czech Academy of Sciences, Brno, Czechia
- Centro de Investigación Ecológica y Aplicaciones Forestales (CREAF), Barcelona, Spain
| | | | - Michal Oravec
- Global Change Research Institute, Czech Academy of Sciences, Brno, Czechia
| | - Petr Holub
- Global Change Research Institute, Czech Academy of Sciences, Brno, Czechia
| | - Barbora Veselá
- Global Change Research Institute, Czech Academy of Sciences, Brno, Czechia
| | - Jordi Sardans
- Global Change Research Institute, Czech Academy of Sciences, Brno, Czechia
- Centro de Investigación Ecológica y Aplicaciones Forestales (CREAF), Barcelona, Spain
- Global Ecology Unit CREAF-CSIC-UAB, Barcelona, Spain
| | - Josep Peñuelas
- Global Change Research Institute, Czech Academy of Sciences, Brno, Czechia
- Centro de Investigación Ecológica y Aplicaciones Forestales (CREAF), Barcelona, Spain
- Global Ecology Unit CREAF-CSIC-UAB, Barcelona, Spain
| | - Otmar Urban
- Global Change Research Institute, Czech Academy of Sciences, Brno, Czechia
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Upadhyay S, Srivastava Y. Retrograde response by reactive oxygen/nitrogen species in plants involving different cellular organelles. Biol Chem 2019; 400:979-989. [PMID: 31004559 DOI: 10.1515/hsz-2018-0463] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/19/2018] [Accepted: 04/07/2019] [Indexed: 01/17/2023]
Abstract
During oxidative and nitrosative stress conditions cellular organelles convey information to the nucleus to express specific sets of genes to withstand the stress condition and to reorganize their growth and developmental pattern. This organelle to nucleus communication is termed retrograde signaling. In the plant system chloroplast and peroxisomes are mainly involved with little involvement of mitochondria and other organelles in oxidative stress-mediated retrograde signaling. In this review, we will discuss retrograde signaling in plant systems with factors that regulate this signaling cascade.
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Affiliation(s)
- Swati Upadhyay
- Biotechnology Division (CSIR-CIMAP), Central Institute of Medicinal and Aromatic Plants (CSIR-CIMAP), P.O. CIMAP, Near Kukrail Picnic Spot, Lucknow 226015, India
| | - Yashdeep Srivastava
- Department of Metabolic and Structural Biology, Central Institute of Medicinal and Aromatic Plants (CSIR-CIMAP), Lucknow 226015, India
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Zaffagnini M, Fermani S, Marchand CH, Costa A, Sparla F, Rouhier N, Geigenberger P, Lemaire SD, Trost P. Redox Homeostasis in Photosynthetic Organisms: Novel and Established Thiol-Based Molecular Mechanisms. Antioxid Redox Signal 2019; 31:155-210. [PMID: 30499304 DOI: 10.1089/ars.2018.7617] [Citation(s) in RCA: 71] [Impact Index Per Article: 14.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Abstract
Significance: Redox homeostasis consists of an intricate network of reactions in which reactive molecular species, redox modifications, and redox proteins act in concert to allow both physiological responses and adaptation to stress conditions. Recent Advances: This review highlights established and novel thiol-based regulatory pathways underlying the functional facets and significance of redox biology in photosynthetic organisms. In the last decades, the field of redox regulation has largely expanded and this work is aimed at giving the right credit to the importance of thiol-based regulatory and signaling mechanisms in plants. Critical Issues: This cannot be all-encompassing, but is intended to provide a comprehensive overview on the structural/molecular mechanisms governing the most relevant thiol switching modifications with emphasis on the large genetic and functional diversity of redox controllers (i.e., redoxins). We also summarize the different proteomic-based approaches aimed at investigating the dynamics of redox modifications and the recent evidence that extends the possibility to monitor the cellular redox state in vivo. The physiological relevance of redox transitions is discussed based on reverse genetic studies confirming the importance of redox homeostasis in plant growth, development, and stress responses. Future Directions: In conclusion, we can firmly assume that redox biology has acquired an established significance that virtually infiltrates all aspects of plant physiology.
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Affiliation(s)
- Mirko Zaffagnini
- 1 Department of Pharmacy and Biotechnology and University of Bologna, Bologna, Italy
| | - Simona Fermani
- 2 Department of Chemistry Giacomo Ciamician, University of Bologna, Bologna, Italy
| | - Christophe H Marchand
- 3 Laboratoire de Biologie Moléculaire et Cellulaire des Eucaryotes, UMR8226, Centre National de la Recherche Scientifique, Institut de Biologie Physico-Chimique, Sorbonne Université, Paris, France
| | - Alex Costa
- 4 Department of Biosciences, University of Milan, Milan, Italy
| | - Francesca Sparla
- 1 Department of Pharmacy and Biotechnology and University of Bologna, Bologna, Italy
| | | | - Peter Geigenberger
- 6 Department Biologie I, Ludwig-Maximilians-Universität München, LMU Biozentrum, Martinsried, Germany
| | - Stéphane D Lemaire
- 3 Laboratoire de Biologie Moléculaire et Cellulaire des Eucaryotes, UMR8226, Centre National de la Recherche Scientifique, Institut de Biologie Physico-Chimique, Sorbonne Université, Paris, France
| | - Paolo Trost
- 1 Department of Pharmacy and Biotechnology and University of Bologna, Bologna, Italy
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Dyda M, Wąsek I, Tyrka M, Wędzony M, Szechyńska-Hebda M. Local and systemic regulation of PSII efficiency in triticale infected by the hemibiotrophic pathogen Microdochium nivale. PHYSIOLOGIA PLANTARUM 2019; 165:711-727. [PMID: 29774565 DOI: 10.1111/ppl.12760] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/24/2017] [Revised: 04/15/2018] [Accepted: 05/11/2018] [Indexed: 05/13/2023]
Abstract
Microdochium nivale is a fungal pathogen that causes yield losses of cereals during winter. Cold hardening under light conditions induces genotype-dependent resistance of a plant to infection. We aim to show how photosystem II (PSII) regulation contributes to plant resistance. Using mapping population of triticale doubled haploid lines, three M. nivale strains and different infection assays, we demonstrate that plants that maintain a higher maximum quantum efficiency of PSII show less leaf damage upon infection. The fungus can establish necrotrophic or biotrophic interactions with susceptible or resistant genotypes, respectively. It is suggested that local inhibition of photosynthesis during the infection of sensitive genotypes is not balanced by a supply of energy from the tissue surrounding the infected cells as efficiently as in resistant genotypes. Thus, defence is limited, which in turn results in extensive necrotic damage. Quantitative trait loci regions, involved in the control of both PSII functioning and resistance, were located on chromosomes 4 and 6, similar to a wide range of PSII- and resistance-related genes. A meta-analysis of microarray experiments showed that the expression of genes involved in the repair and de novo assembly of PSII was maintained at a stable level. However, to establish a favourable energy balance for defence, genes encoding PSII proteins resistant to oxidative degradation were downregulated to compensate for the upregulation of defence-related pathways. Finally, we demonstrate that the structural and functional integrity of the plant is a factor required to meet the energy demand of infected cells, photosynthesis-dependent systemic signalling and defence responses.
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Affiliation(s)
- Mateusz Dyda
- The Franciszek Górski Institute of Plant Physiology, Polish Academy of Sciences, 30-239, Kraków, Poland
- Pedagogical University of Cracow, 30-084, Kraków, Poland
| | - Iwona Wąsek
- The Franciszek Górski Institute of Plant Physiology, Polish Academy of Sciences, 30-239, Kraków, Poland
| | - Mirosław Tyrka
- Department of Biochemistry and Biotechnology, Faculty of Chemistry, Rzeszow University of Technology, Rzeszow, Poland
| | - Maria Wędzony
- Pedagogical University of Cracow, 30-084, Kraków, Poland
| | - Magdalena Szechyńska-Hebda
- The Franciszek Górski Institute of Plant Physiology, Polish Academy of Sciences, 30-239, Kraków, Poland
- Plant Breeding and Acclimatization Institute-National Research Institute, 05-870, Blonie, Poland
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Nehela Y, Killiny N. 'Candidatus Liberibacter asiaticus' and Its Vector, Diaphorina citri, Augment the Tricarboxylic Acid Cycle of Their Host via the γ-Aminobutyric Acid Shunt and Polyamines Pathway. MOLECULAR PLANT-MICROBE INTERACTIONS : MPMI 2019; 32:413-427. [PMID: 30284953 DOI: 10.1094/mpmi-09-18-0238-r] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/05/2023]
Abstract
Huanglongbing (HLB), a destructive citrus disease, is associated with 'Candidatus Liberibacter asiaticus', which is transmitted by the Asian citrus psyllid Diaphorina citri. Both 'Ca. L. asiaticus' and its vector manipulate the host metabolism for their benefit, to meet their nutritional needs and neutralize the host defense responses. We used a targeted gas chromatography-mass spectrometry-based method to explore the connection between the tricarboxylic acid (TCA) cycle, γ-aminobutyric acid (GABA) shunt, and polyamines (PAs) pathways in citrus. 'Ca. L. asiaticus' and D. citri accelerated the conversion of α-ketoglutarate to glutamate, then to GABA, causing an accumulation of GABA in the cytosol. In silico analysis showed that the citrus genome possesses a putative GABA permease that connects the GABA shunt with the TCA cycle and supports the accumulation of succinate, fumarate, and citrate. Additionally, the PAs biosynthetic pathway might be connected directly to the TCA cycle, through the production of fumarate, or indirectly, via enhancement of GABA shunt. Taken together, we suggest that GABA shunt and PAs pathways are alternative pathways that contribute to the flux toward succinate rather than an intact TCA cycle in citrus. Both 'Ca. L. asiaticus' and its vector enhance these pathways. This study provides more insights into citrus responses to the HLB pathosystem and could be a further step toward clues for understanding the nutritional needs of 'Ca. L. asiaticus', which could help in culturing 'Ca. L. asiaticus'.
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Affiliation(s)
- Yasser Nehela
- 1 Department of Plant Pathology, Citrus Research and Education Center, University of Florida, 700 Experiment Station Rd., Lake Alfred, FL 33850, U.S.A.; and
- 2 Department of Agricultural Botany, Faculty of Agriculture, Tanta University, Tanta, Egypt
| | - Nabil Killiny
- 1 Department of Plant Pathology, Citrus Research and Education Center, University of Florida, 700 Experiment Station Rd., Lake Alfred, FL 33850, U.S.A.; and
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Calzone A, Podda A, Lorenzini G, Maserti BE, Carrari E, Deleanu E, Hoshika Y, Haworth M, Nali C, Badea O, Pellegrini E, Fares S, Paoletti E. Cross-talk between physiological and biochemical adjustments by Punica granatum cv. Dente di cavallo mitigates the effects of salinity and ozone stress. THE SCIENCE OF THE TOTAL ENVIRONMENT 2019; 656:589-597. [PMID: 30529963 DOI: 10.1016/j.scitotenv.2018.11.402] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/28/2018] [Revised: 11/23/2018] [Accepted: 11/26/2018] [Indexed: 06/09/2023]
Abstract
Plants are exposed to a broad range of environmental stresses, such as salinity and ozone (O3), and survive due to their ability to adjust their metabolism. The aim of this study was to evaluate the physiological and biochemical adjustments adopted by pomegranate (Punica granatum L. cv. Dente di cavallo) under realistic field conditions. One-year-old saplings were exposed to O3 [two levels denoted as ambient (AO) and elevated (EO) O3 concentrations] and salinity [S (salt, 50 mM NaCl)] for three consecutive months. No salt (NS) plants received distilled water. Despite the accumulation of Na+ and Cl- in the aboveground biomass, no evidence of visible injury due to salt (e.g. tip yellow-brown lesions) was found. The maintenance of leaf water status (i.e. unchanged values of electrolytic leakage and relative water content), the significant increase of abscisic acid, proline and starch content (+98, +65 and +59% compared to AO_NS) and stomatal closure (-24%) are suggested to act as adaptive mechanisms against salt stress in AO_S plants. By contrast, EO_NS plants were unable to protect cells against the negative impact of O3, as confirmed by the reduction of the CO2 assimilation rate (-21%), accumulation of reactive oxygen species (+10 and +225% of superoxide anion and hydrogen peroxide) and malondialdehyde by-product (about 2-fold higher than AO_NS). Plants tried to preserve themselves from further oxidative damage by adopting some biochemical adjustments [i.e. increase in proline content (+41%) and induction of catalase activity (8-fold higher than in AO_NS)]. The interaction of the two stressors induced responses considerably different to those observed when each stressor was applied independently. An analysis of the antioxidant pool revealed that the biochemical adjustments adopted by P. granatum under EO_S conditions (e.g. reduction of total ascorbate; increased activities of superoxide dismutase and catalase) were not sufficient to ameliorate the O3-induced oxidative stress.
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Affiliation(s)
- Antonella Calzone
- Department of Agriculture, Food and Environment, University of Pisa, Via del Borghetto 80, Pisa 56124, Italy
| | - Alessandra Podda
- Department of Agriculture, Food and Environment, University of Pisa, Via del Borghetto 80, Pisa 56124, Italy; National Research Council, Via Madonna del Piano 10, Sesto Fiorentino, Florence 50019, Italy
| | - Giacomo Lorenzini
- Department of Agriculture, Food and Environment, University of Pisa, Via del Borghetto 80, Pisa 56124, Italy; CIRSEC, Centre for Climatic Change Impact, University of Pisa, Via del Borghetto 80, Pisa 56124, Italy
| | - Bianca Elena Maserti
- National Research Council, Via Madonna del Piano 10, Sesto Fiorentino, Florence 50019, Italy
| | - Elisa Carrari
- National Research Council, Via Madonna del Piano 10, Sesto Fiorentino, Florence 50019, Italy
| | - Elena Deleanu
- National Institute for Research and Development in Forestry "Marin Dracea", B-dul Eroilor 128, Voluntari, Ilfov 077190, Romania
| | - Yasutomo Hoshika
- National Research Council, Via Madonna del Piano 10, Sesto Fiorentino, Florence 50019, Italy
| | - Matthew Haworth
- National Research Council, Via Madonna del Piano 10, Sesto Fiorentino, Florence 50019, Italy
| | - Cristina Nali
- Department of Agriculture, Food and Environment, University of Pisa, Via del Borghetto 80, Pisa 56124, Italy; CIRSEC, Centre for Climatic Change Impact, University of Pisa, Via del Borghetto 80, Pisa 56124, Italy
| | - Ovidiu Badea
- National Institute for Research and Development in Forestry "Marin Dracea", B-dul Eroilor 128, Voluntari, Ilfov 077190, Romania; Transilvania University of Brasov, B-dul Eroilor 29, Brasov 500036, Romania
| | - Elisa Pellegrini
- Department of Agriculture, Food and Environment, University of Pisa, Via del Borghetto 80, Pisa 56124, Italy; CIRSEC, Centre for Climatic Change Impact, University of Pisa, Via del Borghetto 80, Pisa 56124, Italy.
| | - Silvano Fares
- Research Centre for Forestry and Wood, Council for Agricultural Research and Economics, Arezzo, Italy
| | - Elena Paoletti
- National Research Council, Via Madonna del Piano 10, Sesto Fiorentino, Florence 50019, Italy
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Sunil B, Saini D, Bapatla RB, Aswani V, Raghavendra AS. Photorespiration is complemented by cyclic electron flow and the alternative oxidase pathway to optimize photosynthesis and protect against abiotic stress. PHOTOSYNTHESIS RESEARCH 2019; 139:67-79. [PMID: 30187303 DOI: 10.1007/s11120-018-0577-x] [Citation(s) in RCA: 46] [Impact Index Per Article: 9.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/06/2018] [Accepted: 08/24/2018] [Indexed: 05/02/2023]
Abstract
Optimization of photosynthetic performance and protection against abiotic stress are essential to sustain plant growth. Photorespiratory metabolism can help plants to adapt to abiotic stress. The beneficial role of photorespiration under abiotic stress is further strengthened by cyclic electron flow (CEF) and alternative oxidase (AOX) pathways. We have attempted to critically assess the literature on the responses of these three phenomena-photorespiration, CEF and AOX, to different stress situations. We emphasize that photorespiration is the key player to protect photosynthesis and upregulates CEF as well as AOX. Then these three processes work in coordination to protect the plants against photoinhibition and maintain an optimal redox state in the cell, while providing ATP for metabolism and protein repair. H2O2 generated during photorespiratory metabolism seems to be an important signal to upregulate CEF or AOX. Further experiments are necessary to identify the signals originating from CEF or AOX to modulate photorespiration. The mutants deficient in CEF or AOX or both could be useful in this regard. The mutual interactions between CEF and AOX, so as to keep their complementarity, are also to be examined further.
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Affiliation(s)
- Bobba Sunil
- Department of Plant Sciences, School of Life Sciences, University of Hyderabad, Hyderabad, 500046, India
| | - Deepak Saini
- Department of Plant Sciences, School of Life Sciences, University of Hyderabad, Hyderabad, 500046, India
| | - Ramesh B Bapatla
- Department of Plant Sciences, School of Life Sciences, University of Hyderabad, Hyderabad, 500046, India
| | - Vetcha Aswani
- Department of Plant Sciences, School of Life Sciences, University of Hyderabad, Hyderabad, 500046, India
| | - Agepati S Raghavendra
- Department of Plant Sciences, School of Life Sciences, University of Hyderabad, Hyderabad, 500046, India.
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79
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Souza PFN, Garcia-Ruiz H, Carvalho FEL. What proteomics can reveal about plant-virus interactions? Photosynthesis-related proteins on the spotlight. THEORETICAL AND EXPERIMENTAL PLANT PHYSIOLOGY 2019; 31:227-248. [PMID: 31355128 PMCID: PMC6660014 DOI: 10.1007/s40626-019-00142-0] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/13/2023]
Abstract
Plant viruses are responsible for losses in worldwide production of numerous economically important food and fuel crops. As obligate cellular parasites with very small genomes, viruses rely on their hosts for replication, assembly, intra- and intercellular movement, and attraction of vectors for dispersal. Chloroplasts are photosynthesis and are the site of replication for several viruses. When viruses replicate in chloroplasts, photosynthesis, an essential process in plant physiology, is inhibited. The mechanisms underlying molecular and biochemical changes during compatible and incompatible plants-virus interactions, are only beginning to be elucidated, including changes in proteomic profiles induced by virus infections. In this review, we highlight the importance of proteomic studies to understand plant-virus interactions, especially emphasizing the changes in photosynthesis-related protein accumulation. We focus on: (a) chloroplast proteins that differentially accumulate during viral infection; (b) the significance with respect to chloroplast-virus interaction; and (c) alterations in plant's energetic metabolism and the subsequently the plant defense mechanisms to overcome viral infection.
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Affiliation(s)
- Pedro F N Souza
- Department of Plant Pathology, Nebraska Center for Virology, University of Nebraska-Lincoln, Lincoln, NE, USA
| | - Hernan Garcia-Ruiz
- Department of Plant Pathology, Nebraska Center for Virology, University of Nebraska-Lincoln, Lincoln, NE, USA
| | - Fabricio E L Carvalho
- Department of Biochemistry and Molecular Biology, Federal University of Ceará, Fortaleza, Ceará, Brazil
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80
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Guidi L, Lo Piccolo E, Landi M. Chlorophyll Fluorescence, Photoinhibition and Abiotic Stress: Does it Make Any Difference the Fact to Be a C3 or C4 Species? FRONTIERS IN PLANT SCIENCE 2019; 10:174. [PMID: 30838014 PMCID: PMC6382737 DOI: 10.3389/fpls.2019.00174] [Citation(s) in RCA: 127] [Impact Index Per Article: 25.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/23/2018] [Accepted: 02/01/2019] [Indexed: 05/06/2023]
Abstract
Chlorophyll fluorescence analysis is one of the most powerful and widely used techniques to study the effect of stresses on the photosynthetic process. From the first utilization, the F v/F m ratio has been largely used as a sensitive indicator of plant photosynthetic performance. Decreases of this index are indicative of the reduction of photosystem II (PSII) efficiency, namely photoinhibition. In the last 20 years, application of chlorophyll fluorescence has been largely improved, and many other informative parameters have been established to detect PSII photochemical efficiency and the partitioning of light energy to alternative dissipative mechanisms (qE, energy-dependent quenching; qZ, zeaxanthin-dependent quenching and qI, photoinhibitory quenching; qH, sustained photoprotective antenna quenching; qM, quenching dependent to chloroplast movement; qT, light harvesting complexes II-I state-transition) such as the recently developed "photoprotective power" of non-photochemical quenching (pNPQ). This review reports a brief description of the main chlorophyll fluorescence parameters and a wide analysis of the current bibliography on the use of different parameters which are useful to detect events of PSII photoinhibition. In addition, in view of the inherent differences in morpho-anatomical, physiological and biochemical features between C3 and C4 metabolism, possible differences in terms of photoinhibition between C3 and C4 plant species under stress conditions are proposed. The attempt is to highlight the limits of their comparison in terms of susceptibility to photoinhibition and to propose direction of future research which, assisted by chlorophyll fluorescence, should improve the knowledge of the different sensitivity of C3 and C4 to abiotic stressors.
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Affiliation(s)
- Lucia Guidi
- Department of Agriculture, Food and Environment, University of Pisa, Pisa, Italy
- Center for Climate Change Impacts, University of Pisa, Pisa, Italy
| | - Ermes Lo Piccolo
- Department of Agriculture, Food and Environment, University of Pisa, Pisa, Italy
| | - Marco Landi
- Department of Agriculture, Food and Environment, University of Pisa, Pisa, Italy
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81
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Toniutti L, Breitler JC, Guittin C, Doulbeau S, Etienne H, Campa C, Lambot C, Herrera Pinilla JC, Bertrand B. An Altered Circadian Clock Coupled with a Higher Photosynthesis Efficiency Could Explain the Better Agronomic Performance of a New Coffee Clone When Compared with a Standard Variety. Int J Mol Sci 2019; 20:ijms20030736. [PMID: 30744144 PMCID: PMC6386876 DOI: 10.3390/ijms20030736] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2018] [Revised: 01/28/2019] [Accepted: 01/30/2019] [Indexed: 11/16/2022] Open
Abstract
In a context where climate change is threatening coffee productivity, the management of coffee leaf rust is a challenging issue. Major resistant genes, which have been used for many years, are systematically being overcome by pathogens. Developing healthy plants, able to defend themselves and be productive even when attacked by the pathogen, should be part of a more sustainable alternative approach. We compared one hybrid (GPFA124), selected for its good health in various environments including a reduced rust incidence, and the cv. 'Caturra', considered as a standard in terms of productivity and quality but highly susceptible to rust, for phenotypic variables and for the expression of genes involved in the circadian clock and in primary photosynthetic metabolism. The GPFA124 hybrid showed increased photosynthetic electron transport efficiency, better carbon partitioning, and higher chlorophyll content. A strong relationship exists between chlorophyll a fluorescence and the expression of genes related to the photosynthetic electron transport chain. We also showed an alteration of the amplitude of circadian clock genes in the clone. Our work also indicated that increased photosynthetic electron transport efficiency is related to the clone's better performance. Chlorophyll a fluorescence measurement is a good indicator of the coffee tree's physiological status for the breeder. We suggest a connection between the circadian clock and carbon metabolism in coffee tree.
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Affiliation(s)
- Lucile Toniutti
- CIRAD, IPME, 34 398 Montpellier, France.
- UMR IPME, Univ. Montpellier, IRD, CIRAD, 34 398 Montpellier, France.
- Nestlé R&D Tours, 101 AV. G. Eiffel, Notre Dame d'Oé, BP 49716, 37097 Tours CEDEX 2, France.
| | - Jean-Christophe Breitler
- CIRAD, IPME, 34 398 Montpellier, France.
- UMR IPME, Univ. Montpellier, IRD, CIRAD, 34 398 Montpellier, France.
| | - Charlie Guittin
- IRD, IPME, 34 398 Montpellier, France.
- UMR IPME, Univ. Montpellier, IRD, CIRAD, 34 398 Montpellier, France.
| | | | - Hervé Etienne
- CIRAD, IPME, 34 398 Montpellier, France.
- UMR IPME, Univ. Montpellier, IRD, CIRAD, 34 398 Montpellier, France.
| | - Claudine Campa
- IRD, IPME, 34 398 Montpellier, France.
- UMR IPME, Univ. Montpellier, IRD, CIRAD, 34 398 Montpellier, France.
| | - Charles Lambot
- Nestlé R&D Tours, 101 AV. G. Eiffel, Notre Dame d'Oé, BP 49716, 37097 Tours CEDEX 2, France.
| | | | - Benoît Bertrand
- CIRAD, IPME, 34 398 Montpellier, France.
- UMR IPME, Univ. Montpellier, IRD, CIRAD, 34 398 Montpellier, France.
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82
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Yang Z, Mhamdi A, Noctor G. Analysis of catalase mutants underscores the essential role of CATALASE2 for plant growth and day length-dependent oxidative signalling. PLANT, CELL & ENVIRONMENT 2019; 42:688-700. [PMID: 30291629 DOI: 10.1111/pce.13453] [Citation(s) in RCA: 30] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/17/2018] [Revised: 09/26/2018] [Accepted: 09/27/2018] [Indexed: 06/08/2023]
Abstract
Three genes encode catalase in Arabidopsis. Although the role of CAT2 in photorespiration is well established, the importance of the different catalases in other processes is less clear. Analysis of cat1, cat2, cat3, cat1 cat2, and cat2 cat3 T-DNA mutants revealed that cat2 had the largest effect on activity in both roots and leaves. Root growth was inhibited in all cat2-containing lines, but this inhibition was prevented by growing plants at high CO2 , suggesting that it is mainly an indirect effect of stress at the leaf level. Analysis of double mutants suggested some overlap between CAT2 and CAT3 functions in leaves and CAT1 and CAT2 in seeds. When plants had been grown to a similar developmental stage in short days or long days, equal-time exposure to oxidative stress caused by genetic or pharmacological inhibition of catalase produced a much stronger induction of H2 O2 marker genes in short day plants. Together, our data (a) underline the importance of CAT2 in basal H2 O2 processing in Arabidopsis; (b) suggest that CAT1 and CAT3 are mainly "backup" or stress-specific enzymes; and (c) establish that day length-dependent responses to catalase deficiency are independent of the duration of oxidative stress.
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Affiliation(s)
- Zheng Yang
- Institute of Plant Sciences Paris Saclay IPS2, Université Paris-Sud, CNRS, INRA, Université Evry, Paris Diderot, Sorbonne Paris-Cité, Université Paris-Saclay, Orsay, France
| | - Amna Mhamdi
- Institute of Plant Sciences Paris Saclay IPS2, Université Paris-Sud, CNRS, INRA, Université Evry, Paris Diderot, Sorbonne Paris-Cité, Université Paris-Saclay, Orsay, France
| | - Graham Noctor
- Institute of Plant Sciences Paris Saclay IPS2, Université Paris-Sud, CNRS, INRA, Université Evry, Paris Diderot, Sorbonne Paris-Cité, Université Paris-Saclay, Orsay, France
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Gallé Á, Czékus Z, Bela K, Horváth E, Ördög A, Csiszár J, Poór P. Plant Glutathione Transferases and Light. FRONTIERS IN PLANT SCIENCE 2019; 9:1944. [PMID: 30687349 PMCID: PMC6333738 DOI: 10.3389/fpls.2018.01944] [Citation(s) in RCA: 43] [Impact Index Per Article: 8.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/28/2018] [Accepted: 12/13/2018] [Indexed: 05/09/2023]
Abstract
The activity and expression of glutathione transferases (GSTs) depend on several less-known endogenous and well-described exogenous factors, such as the developmental stage, presence, and intensity of different stressors, as well as on the absence or presence and quality of light, which to date have received less attention. In this review, we focus on discussing the role of circadian rhythm, light quality, and intensity in the regulation of plant GSTs. Recent studies demonstrate that diurnal regulation can be recognized in GST activity and gene expression in several plant species. In addition, the content of one of their co-substrates, reduced glutathione (GSH), also shows diurnal changes. Darkness, low light or shade mostly reduces GST activity, while high or excess light significantly elevates both the activity and expression of GSTs and GSH levels. Besides the light-regulated induction and dark inactivation of GSTs, these enzymes can also participate in the signal transduction of visible and UV light. For example, red light may alleviate the harmful effects of pathogens and abiotic stressors by increasing GST activity and expression, as well as GSH content in leaves of different plant species. Based on this knowledge, further research on plants (crops and weeds) or organs and temporal regulation of GST activity and gene expression is necessary for understanding the complex regulation of plant GSTs under various light conditions in order to increase the yield and stress tolerance of plants in the changing environment.
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Affiliation(s)
- Ágnes Gallé
- Department of Plant Biology, Faculty of Science and InformaticsUniversity of Szeged, Szeged, Hungary
| | - Zalán Czékus
- Department of Plant Biology, Faculty of Science and InformaticsUniversity of Szeged, Szeged, Hungary
| | - Krisztina Bela
- Department of Plant Biology, Faculty of Science and InformaticsUniversity of Szeged, Szeged, Hungary
| | - Edit Horváth
- Biological Research CentreInstitute of Plant Biology, Szeged, Hungary
| | - Attila Ördög
- Department of Plant Biology, Faculty of Science and InformaticsUniversity of Szeged, Szeged, Hungary
| | - Jolán Csiszár
- Department of Plant Biology, Faculty of Science and InformaticsUniversity of Szeged, Szeged, Hungary
| | - Péter Poór
- Department of Plant Biology, Faculty of Science and InformaticsUniversity of Szeged, Szeged, Hungary
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84
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Lakkis S, Trotel-Aziz P, Rabenoelina F, Schwarzenberg A, Nguema-Ona E, Clément C, Aziz A. Strengthening Grapevine Resistance by Pseudomonas fluorescens PTA-CT2 Relies on Distinct Defense Pathways in Susceptible and Partially Resistant Genotypes to Downy Mildew and Gray Mold Diseases. FRONTIERS IN PLANT SCIENCE 2019; 10:1112. [PMID: 31620150 PMCID: PMC6759587 DOI: 10.3389/fpls.2019.01112] [Citation(s) in RCA: 30] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/29/2019] [Accepted: 08/13/2019] [Indexed: 05/21/2023]
Abstract
Downy mildew caused by the oomycete Plasmopara viticola and gray mold caused by the fungus Botrytis cinerea are among the highly threatening diseases in vineyards. The current strategy to control these diseases relies totally on the application of fungicides. The use of beneficial microbes is arising as a sustainable strategy in controlling various diseases. This can be achieved through the activation of the plants' own immune system, known as induced systemic resistance (ISR). We previously showed that bacteria-mediated ISR in grapevine involves activation of both immune response and priming state upon B. cinerea challenge. However, the effectiveness of beneficial bacteria against the oomycete P. viticola remains unknown, and mechanisms underpinning ISR against pathogens with different lifestyles need to be deciphered. In this study, we focused on the capacity of Pseudomonas fluorescens PTA-CT2 to induce ISR in grapevine against P. viticola and B. cinerea by using two grafted cultivars differing in their susceptibility to downy mildew, Pinot noir as susceptible and Solaris as partially resistant. On the basis of their contrasting phenotypes, we explored mechanisms underlying ISR before and upon pathogen infection. Our results provide evidence that in the absence of pathogen infection, PTA-CT2 does not elicit any consistent change of basal defenses, while it affects hormonal status and enhances photosynthetic efficiency in both genotypes. PTA-CT2 also induces ISR against P. viticola and B. cinerea by priming common and distinct defensive pathways. After P. viticola challenge, PTA-CT2 primes salicylic acid (SA)- and hypersensitive response (HR)-related genes in Solaris, but SA and abscisic acid (ABA) accumulation in Pinot noir. However, ISR against B. cinerea was associated with potentiated ethylene signaling in Pinot noir, but with primed expression of jasmonic acid (JA)- and SA-responsive genes in Solaris, together with downregulation of HR-related gene and accumulation of ABA and phytoalexins.
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Affiliation(s)
- Sara Lakkis
- Induced Resistance and Plant Bioprotection (RIBP), SFR Condorcet FR-CNRS 3417, University of Reims, UFR Sciences, Reims, France
| | - Patricia Trotel-Aziz
- Induced Resistance and Plant Bioprotection (RIBP), SFR Condorcet FR-CNRS 3417, University of Reims, UFR Sciences, Reims, France
| | - Fanja Rabenoelina
- Induced Resistance and Plant Bioprotection (RIBP), SFR Condorcet FR-CNRS 3417, University of Reims, UFR Sciences, Reims, France
| | | | - Eric Nguema-Ona
- Centre Mondial de l’Innovation, Groupe Roullier, Saint-Malo, France
| | - Christophe Clément
- Induced Resistance and Plant Bioprotection (RIBP), SFR Condorcet FR-CNRS 3417, University of Reims, UFR Sciences, Reims, France
| | - Aziz Aziz
- Induced Resistance and Plant Bioprotection (RIBP), SFR Condorcet FR-CNRS 3417, University of Reims, UFR Sciences, Reims, France
- *Correspondence: Aziz Aziz,
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85
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Lu Y, Yao J. Chloroplasts at the Crossroad of Photosynthesis, Pathogen Infection and Plant Defense. Int J Mol Sci 2018; 19:E3900. [PMID: 30563149 PMCID: PMC6321325 DOI: 10.3390/ijms19123900] [Citation(s) in RCA: 96] [Impact Index Per Article: 16.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2018] [Revised: 11/30/2018] [Accepted: 12/03/2018] [Indexed: 12/31/2022] Open
Abstract
Photosynthesis, pathogen infection, and plant defense are three important biological processes that have been investigated separately for decades. Photosynthesis generates ATP, NADPH, and carbohydrates. These resources are utilized for the synthesis of many important compounds, such as primary metabolites, defense-related hormones abscisic acid, ethylene, jasmonic acid, and salicylic acid, and antimicrobial compounds. In plants and algae, photosynthesis and key steps in the synthesis of defense-related hormones occur in chloroplasts. In addition, chloroplasts are major generators of reactive oxygen species and nitric oxide, and a site for calcium signaling. These signaling molecules are essential to plant defense as well. All plants grown naturally are attacked by pathogens. Bacterial pathogens enter host tissues through natural openings or wounds. Upon invasion, bacterial pathogens utilize a combination of different virulence factors to suppress host defense and promote pathogenicity. On the other hand, plants have developed elaborate defense mechanisms to protect themselves from pathogen infections. This review summarizes recent discoveries on defensive roles of signaling molecules made by plants (primarily in their chloroplasts), counteracting roles of chloroplast-targeted effectors and phytotoxins elicited by bacterial pathogens, and how all these molecules crosstalk and regulate photosynthesis, pathogen infection, and plant defense, using chloroplasts as a major battlefield.
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Affiliation(s)
- Yan Lu
- Department of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008, USA.
| | - Jian Yao
- Department of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008, USA.
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86
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Transcriptome-based mining and expression profiling of Pythium responsive transcription factors in Zingiber sp. Funct Integr Genomics 2018; 19:249-264. [PMID: 30415383 DOI: 10.1007/s10142-018-0644-6] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/16/2018] [Revised: 04/29/2018] [Accepted: 10/29/2018] [Indexed: 01/18/2023]
Abstract
Transcription factors (TFs) fine-tune the host defense transcriptome in response to pathogen invasions. No information is available on Zingiber zerumbet (Zz) TFs involved in defense response against Pythium myriotylum. Here, we provide a global identification, characterization, and temporal expression profiling of Zz TFs following an incompatible interaction with P. myriotylum using a transcriptome sequencing approach. We identified a total of 903 TFs belonging to 96 families based on their conserved domains. Evolutionary analysis clustered the Zz TFs according to their phylogenetic affinity, providing glimpses of their functional diversities. High throughput expression array analysis highlighted a complex interplay between activating and repressing transcription factors in fine-tuning Zz defense response against P. myriotylum. The high differential modulation of TFs involved in cell wall fortification, lignin biosynthesis, and SA/JA hormone crosstalk allows us to envisage that this mechanism plays a central role in restricting P. myriotylum proliferation in Zz. This study lays a solid foundation and provides valuable resources for the investigation of the evolutionary history and biological functions of Zz TF genes involved in defense response.
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87
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Paudel DB, Sanfaçon H. Exploring the Diversity of Mechanisms Associated With Plant Tolerance to Virus Infection. FRONTIERS IN PLANT SCIENCE 2018; 9:1575. [PMID: 30450108 PMCID: PMC6224807 DOI: 10.3389/fpls.2018.01575] [Citation(s) in RCA: 56] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/28/2018] [Accepted: 10/09/2018] [Indexed: 05/17/2023]
Abstract
Tolerance is defined as an interaction in which viruses accumulate to some degree without causing significant loss of vigor or fitness to their hosts. Tolerance can be described as a stable equilibrium between the virus and its host, an interaction in which each partner not only accommodate trade-offs for survival but also receive some benefits (e.g., protection of the plant against super-infection by virulent viruses; virus invasion of meristem tissues allowing vertical transmission). This equilibrium, which would be associated with little selective pressure for the emergence of severe viral strains, is common in wild ecosystems and has important implications for the management of viral diseases in the field. Plant viruses are obligatory intracellular parasites that divert the host cellular machinery to complete their infection cycle. Highjacking/modification of plant factors can affect plant vigor and fitness. In addition, the toxic effects of viral proteins and the deployment of plant defense responses contribute to the induction of symptoms ranging in severity from tissue discoloration to malformation or tissue necrosis. The impact of viral infection is also influenced by the virulence of the specific virus strain (or strains for mixed infections), the host genotype and environmental conditions. Although plant resistance mechanisms that restrict virus accumulation or movement have received much attention, molecular mechanisms associated with tolerance are less well-understood. We review the experimental evidence that supports the concept that tolerance can be achieved by reaching the proper balance between plant defense responses and virus counter-defenses. We also discuss plant translation repression mechanisms, plant protein degradation or modification pathways and viral self-attenuation strategies that regulate the accumulation or activity of viral proteins to mitigate their impact on the host. Finally, we discuss current progress and future opportunities toward the application of various tolerance mechanisms in the field.
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Affiliation(s)
- Dinesh Babu Paudel
- Department of Botany, The University of British Columbia, Vancouver, BC, Canada
| | - Hélène Sanfaçon
- Summerland Research and Development Centre, Agriculture and Agri-Food Canada, Summerland, BC, Canada
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88
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Zhou D, Huang X, Guo J, dos‐Santos ML, Vivanco JM. Trichoderma gamsii affected herbivore feeding behaviour on Arabidopsis thaliana by modifying the leaf metabolome and phytohormones. Microb Biotechnol 2018; 11:1195-1206. [PMID: 30221488 PMCID: PMC6196387 DOI: 10.1111/1751-7915.13310] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/13/2018] [Revised: 07/02/2018] [Accepted: 08/07/2018] [Indexed: 11/30/2022] Open
Abstract
Plants can re-programme their transcriptome, proteome and metabolome to deal with environmental and biotic stress. It has been shown that the rhizosphere microbiome has influence on the plant metabolome and on herbivore behaviour. In the present study, Trichoderma gamsii was isolated from Arabidopsis thaliana rhizosphere soil. The inoculation of roots of Arabidopsis thaliana with T. gamsii significantly inhibited the feeding behaviour of Trichoplusia ni and affected the metabolome as well as the content of phytohormones in Arabidopsis leaves. T. gamsii-treated plant leaves had higher levels of amino acids and lower concentrations of sugars. In addition, T. gamsii-treated plant leaves had more abscisic acid (ABA) and lower levels of salicylic acid (SA) and indole-3-acetic acid (IAA) in comparison with the untreated plants. Furthermore, the inoculation with T. gamsii on different signalling mutants showed that the induction of defences were SA-dependent. These findings indicate that T. gamsii has potential as a new type of biocontrol agent to promote plant repellence to insect attacks.
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Affiliation(s)
- Dongmei Zhou
- Department of Plant PathologyCollege of Plant ProtectionNanjing Agricultural UniversityNanjing210095China
- Department of Horticulture and Landscape ArchitectureCenter for Rhizosphere BiologyColorado State UniversityFort CollinsCO80523USA
- Institute of Plant ProtectionJiangsu Academy of Agricultural SciencesNanjingChina
| | - Xing‐Feng Huang
- Department of Horticulture and Landscape ArchitectureCenter for Rhizosphere BiologyColorado State UniversityFort CollinsCO80523USA
- Department of Chemical and Biological EngineeringColorado State UniversityFort CollinsCO80523USA
| | - Jianhua Guo
- Department of Plant PathologyCollege of Plant ProtectionNanjing Agricultural UniversityNanjing210095China
| | - Marcia L. dos‐Santos
- Department of Horticulture and Landscape ArchitectureCenter for Rhizosphere BiologyColorado State UniversityFort CollinsCO80523USA
- Plant Molecular Biology LaboratoryDepartment of Genetics – “Luiz de Queiroz” College of Agriculture – ESALQUniversity of Sao PauloPiracicabaSP13418‐900Brazil
| | - Jorge M. Vivanco
- Department of Horticulture and Landscape ArchitectureCenter for Rhizosphere BiologyColorado State UniversityFort CollinsCO80523USA
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89
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Panuccio MR, Chaabani S, Roula R, Muscolo A. Bio-priming mitigates detrimental effects of salinity on maize improving antioxidant defense and preserving photosynthetic efficiency. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2018; 132:465-474. [PMID: 30292163 DOI: 10.1016/j.plaphy.2018.09.033] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/28/2018] [Revised: 09/06/2018] [Accepted: 09/26/2018] [Indexed: 05/10/2023]
Abstract
Salinity is an abiotic stress which seriously affects crop production over the world, particularly in arid and semi-arid regions, with harmful effects on germination, growth and yield. Maize (Zea mays L.), cultivated in a wide spectrum of soil and climatic conditions, is the third most important cereal crop after rice and wheat, moderately sensitive to salt stress. A saline level more than 250 mM NaCl damages maize plants, causing severe wilting. In this study, the effects of hydro-priming (distilled water) and bio-priming (Rosmarinus officinalis L. and Artemisia L. leaf extracts) on seed germination and seedling growth of maize, under 100 mM NaCl salinity were investigated. The factorial experiments were carried out in greenhouse under controlled condition (25 °C in 12/12 h day/night) based on a completely randomized design with three replicates. Results showed that both hydro- and bio-priming increased germination percentage and germination indexes in maize seeds. Rosmarinus extract was the most effective in inducing salt resistance in 30 days old seedlings, with beneficial effects in the strengthening of the antioxidant system and in the maintenance of a higher photosynthetic efficiency under salt stress condition.
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Affiliation(s)
- M R Panuccio
- Agriculture Department, Mediterranea University, Feo di Vito, 89122, Reggio Calabria, Italy
| | - S Chaabani
- High Agronomic Institute of Chott Mariem, University of Sousse, Tunisia
| | - R Roula
- High Agronomic Institute of Chott Mariem, University of Sousse, Tunisia
| | - A Muscolo
- Agriculture Department, Mediterranea University, Feo di Vito, 89122, Reggio Calabria, Italy.
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90
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McCabe CE, Cianzio SR, O'Rourke JA, Graham MA. Leveraging RNA-Seq to Characterize Resistance to Brown Stem Rot and the Rbs3 Locus in Soybean. MOLECULAR PLANT-MICROBE INTERACTIONS : MPMI 2018; 31:1083-1094. [PMID: 30004290 DOI: 10.1094/mpmi-01-18-0009-r] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
Abstract
Brown stem rot, caused by the fungus Phialophora gregata, reduces soybean yield by up to 38%. Although three dominant resistance loci have been identified (Rbs1 to Rbs3), the gene networks responsible for pathogen recognition and defense remain unknown. Further, identification and characterization of resistant and susceptible germplasm remains difficult. We conducted RNA-Seq of infected and mock-infected leaf, stem, and root tissues of a resistant (PI 437970, Rbs3) and susceptible (Corsoy 79) genotype. Combining historical mapping data with genotype expression differences allowed us to identify a cluster of receptor-like proteins that are candidates for the Rbs3 resistance gene. Reads mapping to the Rbs3 locus were used to identify potential novel single-nucleotide polymorphisms within candidate genes that could improve phenotyping and breeding efficiency. Comparing responses to infection revealed little overlap in differential gene expression between genotypes or tissues. Gene networks associated with defense, DNA replication, and iron homeostasis are hallmarks of resistance to P. gregata. This novel research demonstrates the utility of combining contrasting genotypes, gene expression, and classical genetic studies to characterize complex disease resistance loci.
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Affiliation(s)
- Chantal E McCabe
- 1 United States Department of Agriculture-Agricultural Research Service Corn Insects and Crop Genetics Research Unit, Ames, IA 50011-1010, U.S.A. and Department of Agronomy, Iowa State University, Ames; and
| | | | - Jamie A O'Rourke
- 1 United States Department of Agriculture-Agricultural Research Service Corn Insects and Crop Genetics Research Unit, Ames, IA 50011-1010, U.S.A. and Department of Agronomy, Iowa State University, Ames; and
| | - Michelle A Graham
- 1 United States Department of Agriculture-Agricultural Research Service Corn Insects and Crop Genetics Research Unit, Ames, IA 50011-1010, U.S.A. and Department of Agronomy, Iowa State University, Ames; and
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91
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Pan Y, Liu Z, Rocheleau H, Fauteux F, Wang Y, McCartney C, Ouellet T. Transcriptome dynamics associated with resistance and susceptibility against fusarium head blight in four wheat genotypes. BMC Genomics 2018; 19:642. [PMID: 30157778 PMCID: PMC6116500 DOI: 10.1186/s12864-018-5012-3] [Citation(s) in RCA: 51] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/19/2018] [Accepted: 08/14/2018] [Indexed: 02/07/2023] Open
Abstract
Background Fusarium head blight (FHB) of wheat in North America is caused mostly by the fungal pathogen Fusarium graminearum (Fg). Upon exposure to Fg, wheat initiates a series of cellular responses involving massive transcriptional reprogramming. In this study, we analyzed transcriptomics data of four wheat genotypes (Nyubai, Wuhan 1, HC374, and Shaw), at 2 and 4 days post inoculation (dpi) with Fg, using RNA-seq technology. Results A total of 37,772 differentially expressed genes (DEGs) were identified, 28,961 from wheat and 8811 from the pathogen. The susceptible genotype Shaw exhibited the highest number of host and pathogen DEGs, including 2270 DEGs associating with FHB susceptibility. Protein serine/threonine kinases and LRR-RK were associated with susceptibility at 2 dpi, while several ethylene-responsive, WRKY, Myb, bZIP and NAC-domain containing transcription factors were associated with susceptibility at 4 dpi. In the three resistant genotypes, 220 DEGs were associated with resistance. Glutathione S-transferase (GST), membrane proteins and distinct LRR-RKs were associated with FHB resistance across the three genotypes. Genes with unique, high up-regulation by Fg in Wuhan 1 were mostly transiently expressed at 2 dpi, while many defense-associated genes were up-regulated at both 2 and 4 dpi in Nyubai; the majority of unique genes up-regulated in HC374 were detected at 4 dpi only. In the pathogen, most genes showed increased expression between 2 and 4 dpi in all genotypes, with stronger levels in the susceptible host; however two pectate lyases and a hydrolase were expressed higher at 2 dpi, and acetyltransferase activity was highly enriched at 4 dpi. Conclusions There was an early up-regulation of LRR-RKs, different between susceptible and resistant genotypes; subsequently, distinct sets of genes associated with defense response were up-regulated. Differences in expression profiles among the resistant genotypes indicate genotype-specific defense mechanisms. This study also shows a greater resemblance in transcriptomics of HC374 to Nyubai, consistent with their sharing of two FHB resistance QTLs on 3BS and 5AS, compared to Wuhan 1 which carries one QTL on 2DL in common with HC374. Electronic supplementary material The online version of this article (10.1186/s12864-018-5012-3) contains supplementary material, which is available to authorized users.
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Affiliation(s)
- Youlian Pan
- Digital Technologies Research Centre, NRC, 1200 Montreal Road, Ottawa, ON, K1A 0R6, Canada.
| | - Ziying Liu
- Digital Technologies Research Centre, NRC, 1200 Montreal Road, Ottawa, ON, K1A 0R6, Canada
| | - Hélène Rocheleau
- Ottawa Research and Development Centre, AAFC, 960 Carling Ave, Ottawa, ON, K1A 0C6, Canada
| | - François Fauteux
- Digital Technologies Research Centre, NRC, 1200 Montreal Road, Ottawa, ON, K1A 0R6, Canada
| | - Yunli Wang
- Digital Technologies Research Centre, NRC, 1200 Montreal Road, Ottawa, ON, K1A 0R6, Canada
| | - Curt McCartney
- Morden Research and Development Centre, AAFC, 101 Route 100, Morden, MB, R6M 1Y5, Canada
| | - Thérèse Ouellet
- Ottawa Research and Development Centre, AAFC, 960 Carling Ave, Ottawa, ON, K1A 0C6, Canada.
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92
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Pan Y, Liu Z, Rocheleau H, Fauteux F, Wang Y, McCartney C, Ouellet T. Transcriptome dynamics associated with resistance and susceptibility against fusarium head blight in four wheat genotypes. BMC Genomics 2018. [PMID: 30157778 DOI: 10.1186/s12864-018-5012-5013] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/01/2023] Open
Abstract
BACKGROUND Fusarium head blight (FHB) of wheat in North America is caused mostly by the fungal pathogen Fusarium graminearum (Fg). Upon exposure to Fg, wheat initiates a series of cellular responses involving massive transcriptional reprogramming. In this study, we analyzed transcriptomics data of four wheat genotypes (Nyubai, Wuhan 1, HC374, and Shaw), at 2 and 4 days post inoculation (dpi) with Fg, using RNA-seq technology. RESULTS A total of 37,772 differentially expressed genes (DEGs) were identified, 28,961 from wheat and 8811 from the pathogen. The susceptible genotype Shaw exhibited the highest number of host and pathogen DEGs, including 2270 DEGs associating with FHB susceptibility. Protein serine/threonine kinases and LRR-RK were associated with susceptibility at 2 dpi, while several ethylene-responsive, WRKY, Myb, bZIP and NAC-domain containing transcription factors were associated with susceptibility at 4 dpi. In the three resistant genotypes, 220 DEGs were associated with resistance. Glutathione S-transferase (GST), membrane proteins and distinct LRR-RKs were associated with FHB resistance across the three genotypes. Genes with unique, high up-regulation by Fg in Wuhan 1 were mostly transiently expressed at 2 dpi, while many defense-associated genes were up-regulated at both 2 and 4 dpi in Nyubai; the majority of unique genes up-regulated in HC374 were detected at 4 dpi only. In the pathogen, most genes showed increased expression between 2 and 4 dpi in all genotypes, with stronger levels in the susceptible host; however two pectate lyases and a hydrolase were expressed higher at 2 dpi, and acetyltransferase activity was highly enriched at 4 dpi. CONCLUSIONS There was an early up-regulation of LRR-RKs, different between susceptible and resistant genotypes; subsequently, distinct sets of genes associated with defense response were up-regulated. Differences in expression profiles among the resistant genotypes indicate genotype-specific defense mechanisms. This study also shows a greater resemblance in transcriptomics of HC374 to Nyubai, consistent with their sharing of two FHB resistance QTLs on 3BS and 5AS, compared to Wuhan 1 which carries one QTL on 2DL in common with HC374.
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Affiliation(s)
- Youlian Pan
- Digital Technologies Research Centre, NRC, 1200 Montreal Road, Ottawa, ON, K1A 0R6, Canada.
| | - Ziying Liu
- Digital Technologies Research Centre, NRC, 1200 Montreal Road, Ottawa, ON, K1A 0R6, Canada
| | - Hélène Rocheleau
- Ottawa Research and Development Centre, AAFC, 960 Carling Ave, Ottawa, ON, K1A 0C6, Canada
| | - François Fauteux
- Digital Technologies Research Centre, NRC, 1200 Montreal Road, Ottawa, ON, K1A 0R6, Canada
| | - Yunli Wang
- Digital Technologies Research Centre, NRC, 1200 Montreal Road, Ottawa, ON, K1A 0R6, Canada
| | - Curt McCartney
- Morden Research and Development Centre, AAFC, 101 Route 100, Morden, MB, R6M 1Y5, Canada
| | - Thérèse Ouellet
- Ottawa Research and Development Centre, AAFC, 960 Carling Ave, Ottawa, ON, K1A 0C6, Canada.
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93
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Beattie GA, Hatfield BM, Dong H, McGrane RS. Seeing the Light: The Roles of Red- and Blue-Light Sensing in Plant Microbes. ANNUAL REVIEW OF PHYTOPATHOLOGY 2018; 56:41-66. [PMID: 29768135 DOI: 10.1146/annurev-phyto-080417-045931] [Citation(s) in RCA: 20] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
Abstract
Plants collect, concentrate, and conduct light throughout their tissues, thus enhancing light availability to their resident microbes. This review explores the role of photosensing in the biology of plant-associated bacteria and fungi, including the molecular mechanisms of red-light sensing by phytochromes and blue-light sensing by LOV (light-oxygen-voltage) domain proteins in these microbes. Bacteriophytochromes function as major drivers of the bacterial transcriptome and mediate light-regulated suppression of virulence, motility, and conjugation in some phytopathogens and light-regulated induction of the photosynthetic apparatus in a stem-nodulating symbiont. Bacterial LOV proteins also influence light-mediated changes in both symbiotic and pathogenic phenotypes. Although red-light sensing by fungal phytopathogens is poorly understood, fungal LOV proteins contribute to blue-light regulation of traits, including asexual development and virulence. Collectively, these studies highlight that plant microbes have evolved to exploit light cues and that light sensing is often coupled with sensing other environmental signals.
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Affiliation(s)
- Gwyn A Beattie
- Department of Plant Pathology & Microbiology, Iowa State University, Ames, Iowa 50011, USA;
| | - Bridget M Hatfield
- Department of Plant Pathology & Microbiology, Iowa State University, Ames, Iowa 50011, USA;
| | - Haili Dong
- Department of Plant Pathology & Microbiology, Iowa State University, Ames, Iowa 50011, USA;
| | - Regina S McGrane
- Department of Biological Sciences, Southwestern Oklahoma State University, Weatherford, Oklahoma 73096, USA
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Santamaría-Hernando S, Rodríguez-Herva JJ, Martínez-García PM, Río-Álvarez I, González-Melendi P, Zamorano J, Tapia C, Rodríguez-Palenzuela P, López-Solanilla E. Pseudomonas syringae pv. tomato exploits light signals to optimize virulence and colonization of leaves. Environ Microbiol 2018; 20:4261-4280. [PMID: 30058114 DOI: 10.1111/1462-2920.14331] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/17/2018] [Revised: 06/13/2018] [Accepted: 06/17/2018] [Indexed: 11/30/2022]
Abstract
Light is pervasive in the leaf environment, creating opportunities for both plants and pathogens to cue into light as a signal to regulate plant-microbe interactions. Light enhances plant defences and regulates opening of stomata, an entry point for foliar bacterial pathogens such as Pseudomonas syringae pv. tomato DC3000 (PsPto). The effect of light perception on gene expression and virulence was investigated in PsPto. Light induced genetic reprogramming in PsPto that entailed significant changes in stress tolerance and virulence. Blue light-mediated up-regulation of type three secretion system genes and red light-mediated down-regulation of coronatine biosynthesis genes. Cells exposed to white light, blue light or darkness before inoculation were more virulent when inoculated at dawn than dusk probably due to an enhanced entry through open stomata. Exposure to red light repressed coronatine biosynthesis genes which could lead to a reduced stomatal re-opening and PsPto entry. Photoreceptor were required for the greater virulence of light-treated and dark-treated PsPto inoculated at dawn as compared to dusk, indicating that these proteins sense the absence of light and contribute to priming of virulence in the dark. These results support a model in which PsPto exploits light changes to maximize survival, entry and virulence on plants.
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Affiliation(s)
- Saray Santamaría-Hernando
- Centro de Biotecnología y Genómica de Plantas, Universidad Politécnica de Madrid (UPM)-Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA) Campus Montegancedo UPM, Pozuelo de Alarcón, 28223, Madrid, Spain
| | - José J Rodríguez-Herva
- Centro de Biotecnología y Genómica de Plantas, Universidad Politécnica de Madrid (UPM)-Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA) Campus Montegancedo UPM, Pozuelo de Alarcón, 28223, Madrid, Spain.,Departamento de Biotecnología-Biología Vegetal, Escuela Técnica Superior de Ingeniería Agronómica, Alimentaria y de Biosistemas, UPM, Madrid, Spain
| | - Pedro M Martínez-García
- Centro de Biotecnología y Genómica de Plantas, Universidad Politécnica de Madrid (UPM)-Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA) Campus Montegancedo UPM, Pozuelo de Alarcón, 28223, Madrid, Spain
| | - Isabel Río-Álvarez
- Centro de Biotecnología y Genómica de Plantas, Universidad Politécnica de Madrid (UPM)-Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA) Campus Montegancedo UPM, Pozuelo de Alarcón, 28223, Madrid, Spain
| | - Pablo González-Melendi
- Centro de Biotecnología y Genómica de Plantas, Universidad Politécnica de Madrid (UPM)-Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA) Campus Montegancedo UPM, Pozuelo de Alarcón, 28223, Madrid, Spain.,Departamento de Biotecnología-Biología Vegetal, Escuela Técnica Superior de Ingeniería Agronómica, Alimentaria y de Biosistemas, UPM, Madrid, Spain
| | - Jaime Zamorano
- Departamento de Astrofísica y CC. de la Atmósfera, Universidad Complutense, Madrid, Spain
| | - Carlos Tapia
- Departamento de Astrofísica y CC. de la Atmósfera, Universidad Complutense, Madrid, Spain
| | - Pablo Rodríguez-Palenzuela
- Centro de Biotecnología y Genómica de Plantas, Universidad Politécnica de Madrid (UPM)-Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA) Campus Montegancedo UPM, Pozuelo de Alarcón, 28223, Madrid, Spain.,Departamento de Biotecnología-Biología Vegetal, Escuela Técnica Superior de Ingeniería Agronómica, Alimentaria y de Biosistemas, UPM, Madrid, Spain
| | - Emilia López-Solanilla
- Centro de Biotecnología y Genómica de Plantas, Universidad Politécnica de Madrid (UPM)-Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA) Campus Montegancedo UPM, Pozuelo de Alarcón, 28223, Madrid, Spain.,Departamento de Biotecnología-Biología Vegetal, Escuela Técnica Superior de Ingeniería Agronómica, Alimentaria y de Biosistemas, UPM, Madrid, Spain
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95
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Dogra V, Rochaix JD, Kim C. Singlet oxygen-triggered chloroplast-to-nucleus retrograde signalling pathways: An emerging perspective. PLANT, CELL & ENVIRONMENT 2018; 41:1727-1738. [PMID: 29749057 DOI: 10.1111/pce.13332] [Citation(s) in RCA: 42] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/28/2018] [Revised: 04/27/2018] [Accepted: 04/27/2018] [Indexed: 05/19/2023]
Abstract
Singlet oxygen (1 O2 ) is a prime cause of photo-damage of the photosynthetic apparatus. The chlorophyll molecules in the photosystem II reaction center and in the light-harvesting antenna complex are major sources of 1 O2 generation. It has been thought that the generation of 1 O2 mainly takes place in the appressed regions of the thylakoid membranes, namely, the grana core, where most of the active photosystem II complexes are localized. Apart from being a toxic molecule, new evidence suggests that 1 O2 significantly contributes to chloroplast-to-nucleus retrograde signalling that primes acclimation and cell death responses. Interestingly, recent studies reveal that chloroplasts operate two distinct 1 O2 -triggered retrograde signalling pathways in which β-carotene and a nuclear-encoded chloroplast protein EXECUTER1 play essential roles as signalling mediators. The coexistence of these mediators raises several questions: their crosstalk, source(s) of 1 O2 , downstream signalling components, and the perception and reaction mechanism of these mediators towards 1 O2 . In this review, we mainly discuss the molecular genetic basis of the mode of action of these two putative 1 O2 sensors and their corresponding retrograde signalling pathways. In addition, we also propose the possible existence of an alternative source of 1 O2 , which is spatially and functionally separated from the grana core.
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Affiliation(s)
- Vivek Dogra
- Shanghai Center for Plant Stress Biology and Center of Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai, 200032, China
| | - Jean-David Rochaix
- Department of Molecular Biology and Plant Biology, University of Geneva, 1205, Geneva, Switzerland
| | - Chanhong Kim
- Shanghai Center for Plant Stress Biology and Center of Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai, 200032, China
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96
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Meng Q, Gupta R, Kwon SJ, Wang Y, Agrawal GK, Rakwal R, Park SR, Kim ST. Transcriptomic Analysis of Oryza sativa Leaves Reveals Key Changes in Response to Magnaporthe oryzae MSP1. THE PLANT PATHOLOGY JOURNAL 2018; 34:257-268. [PMID: 30140180 PMCID: PMC6097817 DOI: 10.5423/ppj.oa.01.2018.0008] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/23/2018] [Revised: 05/04/2018] [Accepted: 05/14/2018] [Indexed: 05/30/2023]
Abstract
Rice blast disease, caused by Magnaporthe oryzae, results in an extensive loss of rice productivity. Previously, we identified a novel M. oryzae secreted protein, termed MSP1 which causes cell death and pathogen-associated molecular pattern (PAMP)-triggered immune (PTI) responses in rice. Here, we report the transcriptome profile of MSP1-induced response in rice, which led to the identification of 21,619 genes, among which 4,386 showed significant changes (P < 0.05 and fold change > 2 or < 1/2) in response to exogenous MSP1 treatment. Functional annotation of differentially regulated genes showed that the suppressed genes were deeply associated with photosynthesis, secondary metabolism, lipid synthesis, and protein synthesis, while the induced genes were involved in lipid degradation, protein degradation, and signaling. Moreover, expression of genes encoding receptor-like kinases, MAPKs, WRKYs, hormone signaling proteins and pathogenesis-related (PR) proteins were also induced by MSP1. Mapping these differentially expressed genes onto various pathways revealed critical information about the MSP1-triggered responses, providing new insights into the molecular mechanism and components of MSP1-triggered PTI responses in rice.
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Affiliation(s)
- Qingfeng Meng
- Department of Plant Bioscience, Life and Energy Convergence Research Institute, Pusan National University, Miryang 46241,
Korea
| | - Ravi Gupta
- Department of Plant Bioscience, Life and Energy Convergence Research Institute, Pusan National University, Miryang 46241,
Korea
| | - Soon Jae Kwon
- Department of Plant Bioscience, Life and Energy Convergence Research Institute, Pusan National University, Miryang 46241,
Korea
| | - Yiming Wang
- Department of Plant-Microbe Interactions, Max Planck Institute for Plant Breeding Research, Carl-von-Linne Weg 10, 50829 Cologne,
Germany
| | - Ganesh Kumar Agrawal
- Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO Box 13265, Kathmandu,
Nepal
| | - Randeep Rakwal
- Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO Box 13265, Kathmandu,
Nepal
- GRADE Academy Private Limited, Adarsh Nagar-13, Birgunj,
Nepal
- Faculty of Health and Sport Sciences and Tsukuba International Academy for Sport Studies (TIAS), University of Tsukuba, Ibaraki 305-8577,
Japan
- Global Research Center for Innovative Life Science, Peptide Drug Innovation, School of Pharmacy and Pharmaceutical Sciences, Hoshi University, Tokyo 142-8501,
Japan
| | - Sang-Ryeol Park
- Gene Engineering Division, National Institute of Agricultural Sciences, Rural Development Administration, Jeonju 54874,
Korea
| | - Sun Tae Kim
- Department of Plant Bioscience, Life and Energy Convergence Research Institute, Pusan National University, Miryang 46241,
Korea
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97
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Yan Y, Yuan Q, Tang J, Huang J, Hsiang T, Wei Y, Zheng L. Colletotrichum higginsianum as a Model for Understanding Host⁻Pathogen Interactions: A Review. Int J Mol Sci 2018; 19:E2142. [PMID: 30041456 PMCID: PMC6073530 DOI: 10.3390/ijms19072142] [Citation(s) in RCA: 35] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2018] [Revised: 07/18/2018] [Accepted: 07/18/2018] [Indexed: 11/16/2022] Open
Abstract
Colletotrichum higginsianum is a hemibiotrophic ascomycetous fungus that causes economically important anthracnose diseases on numerous monocot and dicot crops worldwide. As a model pathosystem, the Colletotrichum⁻Arabidopsis interaction has the significant advantage that both organisms can be manipulated genetically. The goal of this review is to provide an overview of the system and to point out recent significant studies that update our understanding of the pathogenesis of C. higginsianum and resistance mechanisms of Arabidopsis against this hemibiotrophic fungus. The genome sequence of C. higginsianum has provided insights into how genome structure and pathogen genetic variability has been shaped by transposable elements, and allows systematic approaches to longstanding areas of investigation, including infection structure differentiation and fungal⁻plant interactions. The Arabidopsis-Colletotrichum pathosystem provides an integrated system, with extensive information on the host plant and availability of genomes for both partners, to illustrate many of the important concepts governing fungal⁻plant interactions, and to serve as an excellent starting point for broad perspectives into issues in plant pathology.
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Affiliation(s)
- Yaqin Yan
- The Key Lab of Plant Pathology of Hubei Province, Huazhong Agricultural University, Wuhan 430070, China.
| | - Qinfeng Yuan
- The Key Lab of Plant Pathology of Hubei Province, Huazhong Agricultural University, Wuhan 430070, China.
| | - Jintian Tang
- The Key Lab of Plant Pathology of Hubei Province, Huazhong Agricultural University, Wuhan 430070, China.
| | - Junbin Huang
- The Key Lab of Plant Pathology of Hubei Province, Huazhong Agricultural University, Wuhan 430070, China.
| | - Tom Hsiang
- School of Environmental Sciences, University of Guelph, Guelph, ON N1G 2W1, Canada.
| | - Yangdou Wei
- Department of Biology, University of Saskatchewan, Saskatoon, SK S7N 5E2, Canada.
| | - Lu Zheng
- The Key Lab of Plant Pathology of Hubei Province, Huazhong Agricultural University, Wuhan 430070, China.
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98
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Czarnocka W, Karpiński S. Friend or foe? Reactive oxygen species production, scavenging and signaling in plant response to environmental stresses. Free Radic Biol Med 2018; 122:4-20. [PMID: 29331649 DOI: 10.1016/j.freeradbiomed.2018.01.011] [Citation(s) in RCA: 278] [Impact Index Per Article: 46.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 10/10/2017] [Revised: 12/17/2017] [Accepted: 01/09/2018] [Indexed: 01/11/2023]
Abstract
In the natural environment, plants are exposed to a variety of biotic and abiotic stress conditions that trigger rapid changes in the production and scavenging of reactive oxygen species (ROS). The production and scavenging of ROS is compartmentalized, which means that, depending on stimuli type, they can be generated and eliminated in different cellular compartments such as the apoplast, plasma membrane, chloroplasts, mitochondria, peroxisomes, and endoplasmic reticulum. Although the accumulation of ROS is generally harmful to cells, ROS play an important role in signaling pathways that regulate acclimatory and defense responses in plants, such as systemic acquired acclimation (SAA) and systemic acquired resistance (SAR). However, high accumulations of ROS can also trigger redox homeostasis disturbance which can lead to cell death, and in consequence, to a limitation in biomass and yield production. Different ROS have various half-lifetimes and degrees of reactivity toward molecular components such as lipids, proteins, and nucleic acids. Thus, they play different roles in intra- and extra-cellular signaling. Despite their possible damaging effect, ROS should mainly be considered as signaling molecules that regulate local and systemic acclimatory and defense responses. Over the past two decades it has been proven that ROS together with non-photochemical quenching (NPQ), hormones, Ca2+ waves, and electrical signals are the main players in SAA and SAR, two physiological processes essential for plant survival and productivity in unfavorable conditions.
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Affiliation(s)
- Weronika Czarnocka
- Department of Plant Genetics, Breeding and Biotechnology, Faculty of Horticulture, Biotechnology and Landscape Architecture, Warsaw University of Life Sciences (SGGW), Nowoursynowska Street 159, 02-776 Warsaw, Poland; Department of Botany, Faculty of Agriculture and Biology, Warsaw University of Life Sciences (SGGW), Nowoursynowska Street 159, 02-776 Warsaw, Poland
| | - Stanisław Karpiński
- Department of Plant Genetics, Breeding and Biotechnology, Faculty of Horticulture, Biotechnology and Landscape Architecture, Warsaw University of Life Sciences (SGGW), Nowoursynowska Street 159, 02-776 Warsaw, Poland; The Plant Breeding and Acclimatization Institute (IHAR) - National Research Institute, Radzików, 05-870 Błonie, Poland.
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99
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Akimoto‐Tomiyama C, Tanabe S, Kajiwara H, Minami E, Ochiai H. Loss of chloroplast-localized protein phosphatase 2Cs in Arabidopsis thaliana leads to enhancement of plant immunity and resistance to Xanthomonas campestris pv. campestris infection. MOLECULAR PLANT PATHOLOGY 2018; 19:1184-1195. [PMID: 28815858 PMCID: PMC6637992 DOI: 10.1111/mpp.12596] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/04/2017] [Revised: 08/08/2017] [Accepted: 08/12/2017] [Indexed: 05/20/2023]
Abstract
Protein phosphatases (PPs) counteract kinases in reversible phosphorylation events during numerous signal transduction pathways in eukaryotes. PP2Cs, one of the four major classes of the serine/threonine-specific PP family, are greatly expanded in plants. Thus, PP2Cs are thought to play a specific role in signal transduction pathways. Some rice PP2Cs classified in subgroup K are responsive to infection by the compatible Xanthomonas oryzae pv. oryzae, the causal agent of bacterial blight. In Arabidopsis thaliana, orthologous PP2C genes (AtPP2C62 and AtPP2C26) classified to subgroup K are also responsive to Xanthomonas campestris pv. campestris (Xcc, causal agent of black rot) infection. To elucidate the function of these subgroup K PP2Cs, atpp2c62- and atpp2c26-deficient A. thaliana mutants were characterized. A double mutant plant which was inoculated with a compatible Xcc showed reduced lesion development, as well as the suppression of bacterial multiplication. AtPP2C62 and AtPP2C26 localized to the chloroplast. Furthermore, the photosynthesis-related protein, chaperonin-60, was indicated as the potential candidate for the dephosphorylated substrate catalysed by AtPP2C62 and AtPP2C26 using two-dimensional isoelectric focusing sodium dodecylsulfate-polyacrylamide gel electrophoresis (2D-IDF-SDS-PAGE). Taken together, AtPP2C62 and AtPP2C26 are suggested to be involved in both photosynthesis and suppression of the plant immune system. These results imply the occurrence of crosstalk between photosynthesis and the plant defence system to control productivity under pathogen infection.
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Affiliation(s)
- Chiharu Akimoto‐Tomiyama
- Institute of Agrobiological Sciences, National Agriculture and Food Research OrganizationTsukubaIbaraki 305‐8602, Japan
| | - Shigeru Tanabe
- Institute of Agrobiological Sciences, National Agriculture and Food Research OrganizationTsukubaIbaraki 305‐8602, Japan
- Present address:
Sakata Seed CorporationYokohamaJapan
| | - Hideyuki Kajiwara
- Advanced Analysis CenterNational Agriculture and Food Research OrganizationTsukubaIbaraki 305‐8602, Japan
| | - Eiichi Minami
- Institute of Agrobiological Sciences, National Agriculture and Food Research OrganizationTsukubaIbaraki 305‐8602, Japan
| | - Hirokazu Ochiai
- Institute of Agrobiological Sciences, National Agriculture and Food Research OrganizationTsukubaIbaraki 305‐8602, Japan
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100
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Ahammed GJ, Li X, Zhang G, Zhang H, Shi J, Pan C, Yu J, Shi K. Tomato photorespiratory glycolate-oxidase-derived H 2 O 2 production contributes to basal defence against Pseudomonas syringae. PLANT, CELL & ENVIRONMENT 2018; 41:1126-1138. [PMID: 28164315 DOI: 10.1111/pce.12932] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/22/2016] [Accepted: 01/31/2017] [Indexed: 05/10/2023]
Abstract
Despite being essential for C3 plants, photorespiration is believed to cause a significant crop yield loss even under future climates. However, how photorespiration affects plant basal defence still remains largely unknown. Here, we studied the involvement of photorespiration in tomato-Pseudomonas syringae pv. tomato DC3000 interaction focusing on three photorespiratory genes. Inoculation with P. syringae increased photorespiration rate (Pr) and expression of glycolate oxidase (GOX2), serine glyoxylate aminotransferase (SGT) and serine hydroxyl methyltransferase (SHMT1); however, inhibition of photorespiration by isonicotinic acid hydrazide decreased tomato basal defence against P. syringae. Furthermore, silencing of GOX2, SGT or SHMT1 genes in tomato decreased Pr but increased susceptibility to P. syringae, whereas transient overexpression of GOX2, SGT or SHMT1 in tobacco increased basal defence. Further study revealed that salicylic acid (SA) signalling is involved in GOX2-mediated, SGT-mediated and SHMT1-mediated defence. Moreover, H2 O2 pretreatment remarkably alleviated the GOX2 silencing-induced depression in basal defence and SA signalling, whereas it had no effect on that of SGT-silenced and SHMT1-silenced plants. Taken together, these results suggest that H2 O2 is critical for GOX2-modulated but not SGT-modulated or SHMT1-modulated SA signalling and subsequent basal defence against P. syringae. This work deepens the understanding of photorespiration-involved defence responses to bacterial attack in plants.
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Affiliation(s)
- Golam Jalal Ahammed
- Department of Horticulture, Zijingang Campus, Zhejiang University, 866 Yuhangtang Road, Hangzhou, 310058, China
- Zhejiang Provincial Key Laboratory of Horticultural Plant Integrative Biology, 866 Yuhangtang Road, Hangzhou, 310058, China
| | - Xin Li
- Department of Horticulture, Zijingang Campus, Zhejiang University, 866 Yuhangtang Road, Hangzhou, 310058, China
- Tea Research Institute, Chinese Academy of Agricultural Sciences, Hangzhou, 310008, China
| | - Guanqun Zhang
- Department of Horticulture, Zijingang Campus, Zhejiang University, 866 Yuhangtang Road, Hangzhou, 310058, China
| | - Huan Zhang
- Department of Horticulture, Zijingang Campus, Zhejiang University, 866 Yuhangtang Road, Hangzhou, 310058, China
| | - Junying Shi
- Department of Horticulture, Zijingang Campus, Zhejiang University, 866 Yuhangtang Road, Hangzhou, 310058, China
| | - Caizhe Pan
- Department of Horticulture, Zijingang Campus, Zhejiang University, 866 Yuhangtang Road, Hangzhou, 310058, China
| | - Jingquan Yu
- Department of Horticulture, Zijingang Campus, Zhejiang University, 866 Yuhangtang Road, Hangzhou, 310058, China
- Zhejiang Provincial Key Laboratory of Horticultural Plant Integrative Biology, 866 Yuhangtang Road, Hangzhou, 310058, China
| | - Kai Shi
- Department of Horticulture, Zijingang Campus, Zhejiang University, 866 Yuhangtang Road, Hangzhou, 310058, China
- Zhejiang Provincial Key Laboratory of Horticultural Plant Integrative Biology, 866 Yuhangtang Road, Hangzhou, 310058, China
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