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Lopez-Zaplana A, Nicolas-Espinosa J, Carvajal M, Bárzana G. Genome-wide analysis of the aquaporin genes in melon (Cucumis melo L.). Sci Rep 2020; 10:22240. [PMID: 33335220 PMCID: PMC7747737 DOI: 10.1038/s41598-020-79250-w] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/16/2020] [Accepted: 12/02/2020] [Indexed: 12/18/2022] Open
Abstract
Melon (Cucumis melo L.) is a very important crop throughout the world and has great economic importance, in part due to its nutritional properties. It prefers well-drained soil with low acidity and has a strong demand for water during fruit set. Therefore, a correct water balance—involving aquaporins—is necessary to maintain the plants in optimal condition. This manuscript describes the identification and comparative analysis of the complete set of aquaporins in melon. 31 aquaporin genes were identified, classified and analysed according to the evolutionary relationship of melon with related plant species. The individual role of each aquaporin in the transport of water, ions and small molecules was discussed. Finally, qPCR revealed that almost all melon aquaporins in roots and leaves were constitutively expressed. However, the high variations in expression among them point to different roles in water and solute transport, providing important features as that CmPIP1;1 is the predominant isoform and CmTIP1;1 is revealed as the most important osmoregulator in the tonoplast under optimal conditions. The results of this work pointing to the physiological importance of each individual aquaporin of melon opening a field of knowledge that deserves to be investigated.
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Affiliation(s)
- Alvaro Lopez-Zaplana
- Aquaporins Group, Plant Nutrition Department, Centro de Edafología Y Biología Aplicada del Segura (CEBAS-CSIC), Campus Universitario de Espinardo, Edificio 25, 30100, Murcia, Spain
| | - Juan Nicolas-Espinosa
- Aquaporins Group, Plant Nutrition Department, Centro de Edafología Y Biología Aplicada del Segura (CEBAS-CSIC), Campus Universitario de Espinardo, Edificio 25, 30100, Murcia, Spain
| | - Micaela Carvajal
- Aquaporins Group, Plant Nutrition Department, Centro de Edafología Y Biología Aplicada del Segura (CEBAS-CSIC), Campus Universitario de Espinardo, Edificio 25, 30100, Murcia, Spain
| | - Gloria Bárzana
- Aquaporins Group, Plant Nutrition Department, Centro de Edafología Y Biología Aplicada del Segura (CEBAS-CSIC), Campus Universitario de Espinardo, Edificio 25, 30100, Murcia, Spain.
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Balasaheb Karle S, Kumar K, Srivastava S, Suprasanna P. Cloning, in silico characterization and expression analysis of TIP subfamily from rice (Oryza sativa L.). Gene 2020; 761:145043. [DOI: 10.1016/j.gene.2020.145043] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/01/2020] [Revised: 07/28/2020] [Accepted: 08/05/2020] [Indexed: 01/31/2023]
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Yan Y, Sun M, Li Y, Wang J, He C, Yu X. The CsGPA1-CsAQPs module is essential for salt tolerance of cucumber seedlings. PLANT CELL REPORTS 2020; 39:1301-1316. [PMID: 32648011 DOI: 10.1007/s00299-020-02565-5] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/18/2020] [Accepted: 07/01/2020] [Indexed: 06/11/2023]
Abstract
CsGPA1 interacts with CsTIP1.1 (a member of CsAQPs) and suppression of CsGPA1 results the reverse expression of CsAQPs in leaves and roots, resulting in declining water content of cucumber seedlings under salt stress. Salt stress seriously affects cucumber growth and development. Whether the G-protein alpha subunit functions in cucumber during salt stress and its regulation mechanism remains unknown. We interrogated CsGPA1-RNAi lines to identify the role of CsGPA1 during salt stress. Phenotypically, compared with wild type, leaves were severely withered, and root cells showed signs of senescence under salt stress for RNAi lines. Compared with WT, SOD and CAT activity, soluble protein and proline contents all decreased in RNAi lines, while malondialdehyde and relative electrical conductivity increased. Through screening the yeast two-hybrid library and combined with yeast two-hybrid and GST pull-down, the interaction of CsGPA1 with CsTIP1.1 was found the first time in a plant. Then, the expression of aquaporin (AQP) family genes was detected. The expression of CsAQP genes in leaves and roots was primarily up-regulated in WT under salt stress. However, interference by CsGPA1 resulted in enhanced expression of CsAQPs except for CsTIP3.2 in leaves, but reduced expression of some CsAQPs in roots under salt stress. Furthermore, principal component analysis of CsAQP expression profiles and linear regression analysis between CsGPA1 and CsAQPs revealed that CsGPA1 reversely regulated the expression of CsAQPs in leaves and roots under salt stress. Moreover, the water content in leaves and roots of RNAi seedlings significantly decreased compared with WT under salt stress. Overall, CsGPA1 interacts with CsTIP1.1 and suppression of CsGPA1 results in opposite patterns of expression of CsAQPs in leaves and roots, resulting in declining water content of cucumber under salt stress.
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Affiliation(s)
- Yan Yan
- The Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Haidian District, Zhongguancun South St, Beijing, 100081, China
| | - Mintao Sun
- The Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Haidian District, Zhongguancun South St, Beijing, 100081, China
| | - Yansu Li
- The Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Haidian District, Zhongguancun South St, Beijing, 100081, China
| | - Jun Wang
- The Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Haidian District, Zhongguancun South St, Beijing, 100081, China
| | - Chaoxing He
- The Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Haidian District, Zhongguancun South St, Beijing, 100081, China.
| | - Xianchang Yu
- The Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Haidian District, Zhongguancun South St, Beijing, 100081, China.
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Grondin A, Affortit P, Tranchant-Dubreuil C, de la Fuente-Cantó C, Mariac C, Gantet P, Vadez V, Vigouroux Y, Laplaze L. Aquaporins are main contributors to root hydraulic conductivity in pearl millet [Pennisetum glaucum (L) R. Br.]. PLoS One 2020; 15:e0233481. [PMID: 33001997 PMCID: PMC7529256 DOI: 10.1371/journal.pone.0233481] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/05/2020] [Accepted: 09/11/2020] [Indexed: 11/19/2022] Open
Abstract
Pearl millet is a key cereal for food security in arid and semi-arid regions but its yield is increasingly threatened by water stress. Physiological mechanisms relating to conservation of soil water or increased water use efficiency can alleviate that stress. Aquaporins (AQP) are water channels that mediate root water transport, thereby influencing plant hydraulics, transpiration and soil water conservation. However, AQP remain largely uncharacterized in pearl millet. Here, we studied AQP function in root water transport in two pearl millet lines contrasting for water use efficiency (WUE). We observed that these lines also contrasted for root hydraulic conductivity (Lpr) and AQP contribution to Lpr. The line with lower WUE showed significantly higher AQP contribution to Lpr. To investigate AQP isoforms contributing to Lpr, we developed genomic approaches to first identify the entire AQP family in pearl millet and secondly, characterize the plasma membrane intrinsic proteins (PIP) gene expression profile. We identified and annotated 33 AQP genes in pearl millet, among which ten encoded PIP isoforms. PgPIP1-3 and PgPIP1-4 were significantly more expressed in the line showing lower WUE, higher Lpr and higher AQP contribution to Lpr. Overall, our study suggests that the PIP1 AQP family are the main regulators of Lpr in pearl millet and may possibly be associated with mechanisms associated to whole plant water use. This study paves the way for further investigations on AQP functions in pearl millet hydraulics and adaptation to environmental stresses.
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Affiliation(s)
- Alexandre Grondin
- UMR DIADE, IRD, Université de Montpellier, Montpellier, France
- Laboratoire Mixte International Adaptation des Plantes et Microorganismes Associés Aux Stress Environnementaux, Dakar, Senegal
- Laboratoire Commun de Microbiologie, Dakar, Senegal
- Centre d’Étude Régional pour l’Amélioration de l’Adaptation à la Sécheresse, Thiès, Senegal
- * E-mail:
| | - Pablo Affortit
- UMR DIADE, IRD, Université de Montpellier, Montpellier, France
- Laboratoire Mixte International Adaptation des Plantes et Microorganismes Associés Aux Stress Environnementaux, Dakar, Senegal
| | | | | | - Cédric Mariac
- UMR DIADE, IRD, Université de Montpellier, Montpellier, France
| | - Pascal Gantet
- UMR DIADE, IRD, Université de Montpellier, Montpellier, France
| | - Vincent Vadez
- UMR DIADE, IRD, Université de Montpellier, Montpellier, France
- International Crops Research Institute for Semi-Arid Tropics (ICRISAT), Hyderabad, India
| | - Yves Vigouroux
- UMR DIADE, IRD, Université de Montpellier, Montpellier, France
| | - Laurent Laplaze
- UMR DIADE, IRD, Université de Montpellier, Montpellier, France
- Laboratoire Mixte International Adaptation des Plantes et Microorganismes Associés Aux Stress Environnementaux, Dakar, Senegal
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Li G, Chen T, Zhang Z, Li B, Tian S. Roles of Aquaporins in Plant-Pathogen Interaction. PLANTS (BASEL, SWITZERLAND) 2020; 9:E1134. [PMID: 32882951 PMCID: PMC7569825 DOI: 10.3390/plants9091134] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/31/2020] [Revised: 08/28/2020] [Accepted: 08/30/2020] [Indexed: 12/21/2022]
Abstract
Aquaporins (AQPs) are a class of small, membrane channel proteins present in a wide range of organisms. In addition to water, AQPs can facilitate the efficient and selective flux of various small solutes involved in numerous essential processes across membranes. A growing body of evidence now shows that AQPs are important regulators of plant-pathogen interaction, which ultimately lead to either plant immunity or pathogen pathogenicity. In plants, AQPs can mediate H2O2 transport across plasma membranes (PMs) and contribute to the activation of plant defenses by inducing pathogen-associated molecular pattern (PAMP)-triggered immunity and systemic acquired resistance (SAR), followed by downstream defense reactions. This involves the activation of conserved mitogen-activated protein kinase (MAPK) signaling cascades, the production of callose, the activation of NPR1 and PR genes, as well as the opening and closing of stomata. On the other hand, pathogens utilize aquaporins to mediate reactive oxygen species (ROS) signaling and regulate their normal growth, development, secondary or specialized metabolite production and pathogenicity. This review focuses on the roles of AQPs in plant immunity, pathogenicity, and communications during plant-pathogen interaction.
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Affiliation(s)
- Guangjin Li
- Key Laboratory of Plant Resources, Institute of Botany, Innovation Academy for Seed Design, Chinese Academy of Sciences, Beijing 100093, China; (G.L.); (T.C.); (Z.Z.); (B.L.)
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Tong Chen
- Key Laboratory of Plant Resources, Institute of Botany, Innovation Academy for Seed Design, Chinese Academy of Sciences, Beijing 100093, China; (G.L.); (T.C.); (Z.Z.); (B.L.)
| | - Zhanquan Zhang
- Key Laboratory of Plant Resources, Institute of Botany, Innovation Academy for Seed Design, Chinese Academy of Sciences, Beijing 100093, China; (G.L.); (T.C.); (Z.Z.); (B.L.)
| | - Boqiang Li
- Key Laboratory of Plant Resources, Institute of Botany, Innovation Academy for Seed Design, Chinese Academy of Sciences, Beijing 100093, China; (G.L.); (T.C.); (Z.Z.); (B.L.)
| | - Shiping Tian
- Key Laboratory of Plant Resources, Institute of Botany, Innovation Academy for Seed Design, Chinese Academy of Sciences, Beijing 100093, China; (G.L.); (T.C.); (Z.Z.); (B.L.)
- University of Chinese Academy of Sciences, Beijing 100049, China
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Ahmed J, Mercx S, Boutry M, Chaumont F. Evolutionary and Predictive Functional Insights into the Aquaporin Gene Family in the Allotetraploid Plant Nicotiana tabacum. Int J Mol Sci 2020; 21:E4743. [PMID: 32635213 PMCID: PMC7370101 DOI: 10.3390/ijms21134743] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/08/2020] [Revised: 06/26/2020] [Accepted: 07/01/2020] [Indexed: 12/22/2022] Open
Abstract
Aquaporins (AQPs) are a class of integral membrane proteins that facilitate the membrane diffusion of water and other small solutes. Nicotiana tabacum is an important model plant, and its allotetraploid genome has recently been released, providing us with the opportunity to analyze the AQP gene family and its evolution. A total of 88 full-length AQP genes were identified in the N. tabacum genome, and the encoding proteins were assigned into five subfamilies: 34 plasma membrane intrinsic proteins (PIPs); 27 tonoplast intrinsic proteins (TIPs); 20 nodulin26-like intrinsic proteins (NIPs); 3 small basic intrinsic proteins (SIPs); 4 uncharacterized X intrinsic proteins (XIPs), including two splice variants. We also analyzed the genomes of two N. tabacum ancestors, Nicotiana tomentosiformis and Nicotiana sylvestris, and identified 49 AQP genes in each species. Functional prediction, based on the substrate specificity-determining positions (SDPs), revealed significant differences in substrate specificity among the AQP subfamilies. Analysis of the organ-specific AQP expression levels in the N. tabacum plant and RNA-seq data of N. tabacum bright yellow-2 suspension cells indicated that many AQPs are simultaneously expressed, but differentially, according to the organs or the cells. Altogether, these data constitute an important resource for future investigations of the molecular, evolutionary, and physiological functions of AQPs in N. tabacum.
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Affiliation(s)
| | | | | | - François Chaumont
- Louvain Institute of Biomolecular Science and Technology, UCLouvain, Croix du Sud 4-L7.07.14, B-1348 Louvain-la-Neuve, Belgium; (J.A.); (S.M.); (M.B.)
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Aquaporin-Containing Proteopolymersomes in Polyelectrolyte Multilayer Membranes. MEMBRANES 2020; 10:membranes10050103. [PMID: 32443530 PMCID: PMC7281279 DOI: 10.3390/membranes10050103] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/28/2020] [Revised: 05/13/2020] [Accepted: 05/14/2020] [Indexed: 11/17/2022]
Abstract
The field of membranes saw huge developments in the last decades with the introduction of both polyelectrolyte multilayer (PEM)-based membranes and biomimetic membranes. In this work, we combine these two promising systems and demonstrate that proteopolymersomes (PP+) with the incorporated aquaporin protein can be distributed in a controlled fashion using PEMs, even on the inner surface of a hollow fiber membrane. In this way, various proteopolymersome multilayers (PPMs) are fabricated using PP+ as the positively charged species in combination with the polyanions poly(styrene 4-sulfonate) (PSS) and poly(acrylic acid) (PAA). It is shown by reflectometry through alternately adsorbing the polyanions and PP+ that, for both PAA and PSS, a good layer growth is possible. However, when the multilayers are imaged by SEM, the PAA-based PPMs show dewetting, whereas vesicular structures can only be clearly observed in and on the PSS-based PPMs. In addition, membrane permeability decreases upon coating the PPMs to 2.6 L∙m−2∙h−1∙bar−1 for PAA/PP+ and 7.7 L∙m−2∙h−1∙bar−1 for PSS/PP+. Salt retentions show that PAA/PP+ layers are defective (salt retentions <10% and high molecular weight cut-off (MWCO)), in line with the observed dewetting behavior, while PPMs based on PSS show 80% MgSO4 retention in combination with a low MWCO. The PSS/PP+ membranes show a Donnan-exclusion behavior with moderate MgCl2 retention (50%–55%) and high Na2SO4 retention (85%–90%) indicating a high amount of negative charge present within the PPMs. The corresponding PEMs, on the other hand, are predominately positively charged with MgCl2 retention of 97%–98% and Na2SO4 retention of 57%–80%. This means that the charge inside the multilayer and, thus, its separation behavior can be changed when PP+ is used instead of a polycation. When comparing the PPM membranes to the literature, similar performances are observed with other biomimetic membranes that are not based on interfacial polymerization, but these are the only ones prepared using a desired hollow fiber geometry. Combining PEMs and biomimetic approaches can, thus, lead to relevant membranes, especially adding to the versatility of both systems.
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Xue J, Huang Z, Wang S, Xue Y, Ren X, Zeng X, Zhang X. Dry storage improves the vase quality of cut peony by increasing water uptake efficiency through aquaporins regulation. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2020; 148:63-69. [PMID: 31945668 DOI: 10.1016/j.plaphy.2020.01.007] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/04/2019] [Revised: 01/02/2020] [Accepted: 01/05/2020] [Indexed: 05/13/2023]
Abstract
Proper storage prolongs peony market supply. Here, we determined the changes in fresh weight and expression of four aquaporin genes under dry storage (DS) and wet storage (WS). It has showed that after harvesting, the fresh weight change was accompanied with flower opening. After both short- and long-term of storage, the water uptake efficiency in DS group was greater during the first few vase days, providing a direct material basis of DS improved vase quality. The gene expression results showed that PlPIP1;3 and PlTIP2;1 were mainly expressed in petals, whereas PlNIP1;2-like and PlSIP2;1 were mainly expressed in the green tissues. In addition, the expression of PlTIP2;1 in the petals was consistent with the flower opening process, indicating that it may play a major role in facilitating water uptake. During cold storage, the expression of PlPIP1;3 and PlTIP2;1 was higher or more rapidly induced in the DS group, and thus we deduced that they play important roles in improving the vase quality of DS. Furthermore, the expression of PlNIP1;2-like in the early stage of the DS group was more stable than in WS, which may also be partially responsible for the vase quality improvement. In contrast, PlSIP2;1 may not be involved, since no significant change was observed between the DS and WS group. In short, the expression of PlPIP1;3 and PlTIP2;1 in the DS group during storage may improve water uptake efficiency during the vase period and then improving the vase quality of cut peony.
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Affiliation(s)
- Jingqi Xue
- Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Key Laboratory of Biology and Genetic Improvement of Horticultural Crops, Ministry of Agriculture and Rural Affairs, Beijing, 100081, China
| | - Zhen Huang
- Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Key Laboratory of Biology and Genetic Improvement of Horticultural Crops, Ministry of Agriculture and Rural Affairs, Beijing, 100081, China; Zaozhuang Vocational College, 2169 Qilanshan Zhonglu, Zaozhuang, Shandong, 277800, China
| | - Shunli Wang
- Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Key Laboratory of Biology and Genetic Improvement of Horticultural Crops, Ministry of Agriculture and Rural Affairs, Beijing, 100081, China
| | - Yuqian Xue
- Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Key Laboratory of Biology and Genetic Improvement of Horticultural Crops, Ministry of Agriculture and Rural Affairs, Beijing, 100081, China
| | - Xiuxia Ren
- Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Key Laboratory of Biology and Genetic Improvement of Horticultural Crops, Ministry of Agriculture and Rural Affairs, Beijing, 100081, China
| | - Xiuli Zeng
- Institute of Vegetables, Tibet Academy of Agricultural and animal husbandry Sciences, Lhasa, Tibet, 850002, China.
| | - Xiuxin Zhang
- Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Key Laboratory of Biology and Genetic Improvement of Horticultural Crops, Ministry of Agriculture and Rural Affairs, Beijing, 100081, China.
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Nada RM, Abogadallah GM. Contrasting root traits and native regulation of aquaporin differentially determine the outcome of overexpressing a single aquaporin (OsPIP2;4) in two rice cultivars. PROTOPLASMA 2020; 257:583-595. [PMID: 31840193 DOI: 10.1007/s00709-019-01468-x] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/18/2019] [Accepted: 12/04/2019] [Indexed: 05/24/2023]
Abstract
Overexpressing OsPIP2;4 in the two rice cultivars Giza178 and IR64 resulted in contrasting cultivar-dependent physiological attributes under control and drought conditions in the field. In the T3 plants, PIP2;4 expression was significantly higher in the leaves and roots of Giza178 under control but only in the roots under drought condition and higher in the leaves and roots of IR64 under control but not under drought condition compared with that in the corresponding wild types. The transgene improved the plant growth in Giza178 under both growth conditions but had no significant effect in IR64 under either condition. The transgenic lines of Giza178 recovered their leaf relative water content faster than those of the wild type in the afternoon and showed improved gas exchange parameters, water use efficiency, and grain yield, as a result of improved root hydraulic conductivity (Lpr) and xylem sap flow. No comparable responses were found in IR64 although Lpr and xylem sap flow were enhanced in the transgenic lines under the control condition only, suggesting that the positive effect of PIP2;4 on the well-watered leaves of IR64 was offset by the low root/shoot ratio and the inherent expression of other aquaporins. In the transgenic plants of IR64 under drought, PIP2;4 expression was not induced in the roots presumably due to an overriding post-transcription regulatory mechanisms, leading to the lack of changes in the Lpr and xylem sap flow and consequently, the plant growth, water relations, gas exchange, and grain yield were similar to the wild type. The data suggest that the outcome of overexpressing a single aquaporin gene depends on the plant architecture, internal responses to drought, and native expression of other aquaporins.
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Affiliation(s)
- Reham M Nada
- Department of Botany and Microbiology, Faculty of Science, Damietta University, New Damietta, 34517, Egypt.
| | - Gaber M Abogadallah
- Department of Botany and Microbiology, Faculty of Science, Damietta University, New Damietta, 34517, Egypt
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Xu Y, Hu W, Liu J, Song S, Hou X, Jia C, Li J, Miao H, Wang Z, Tie W, Xu B, Jin Z. An aquaporin gene MaPIP2-7 is involved in tolerance to drought, cold and salt stresses in transgenic banana (Musa acuminata L.). PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2020; 147:66-76. [PMID: 31841963 DOI: 10.1016/j.plaphy.2019.12.011] [Citation(s) in RCA: 31] [Impact Index Per Article: 7.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/14/2019] [Revised: 11/30/2019] [Accepted: 12/10/2019] [Indexed: 06/10/2023]
Abstract
Aquaporins (AQPs) transport water and other small molecules; however, their precise role in abiotic stress responses is not fully understood. In this study, we cloned and characterized the PIP2 group AQP gene, MaPIP2-7, in banana. MaPIP2-7 expression was upregulated after osmotic (mannitol), cold, and salt treatments. Overexpression of MaPIP2-7 in banana improved tolerance to multiple stresses such as drought, cold, and salt. MaPIP2-7 transgenic plants showed lower levels of malondialdehyde (MDA) and ion leakage (IL), but higher contents of chlorophyll, proline, soluble sugar, and abscisic acid (ABA) compared with wild type (WT) plants under stress and recovery conditions. Additionally, MaPIP2-7 overexpression decreased cellular contents of Na+ and K+ under salt and recovery conditions, and produced an elevated K+/Na+ ratio under recovery conditions. Finally, ABA biosynthetic and responsive genes exhibited higher expression levels in transgenic lines relative to WT under stress conditions. Taken together, our results demonstrate that MaPIP2-7 confers tolerance to drought, cold, and salt stresses by maintaining osmotic balance, reducing membrane injury, and improving ABA levels.
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Affiliation(s)
- Yi Xu
- Key Laboratory of Genetic Improvement of Bananas, Haikou Experimental Station, Chinese Academy of Tropical Agricultural Sciences, Haikou, Hainan, 571101, China.
| | - Wei Hu
- Key Laboratory of Biology and Genetic Resources of Tropical Crops, Institute of Tropical Bioscience and Biotechnology, Chinese Academy of Tropical Agricultural Sciences, Haikou, Hainan, 571101, China; Hainan Academy of Tropical Agricultural Resource, Haikou, Hainan, 571101, China.
| | - Juhua Liu
- Key Laboratory of Biology and Genetic Resources of Tropical Crops, Institute of Tropical Bioscience and Biotechnology, Chinese Academy of Tropical Agricultural Sciences, Haikou, Hainan, 571101, China; Hainan Academy of Tropical Agricultural Resource, Haikou, Hainan, 571101, China.
| | - Shun Song
- Key Laboratory of Genetic Improvement of Bananas, Haikou Experimental Station, Chinese Academy of Tropical Agricultural Sciences, Haikou, Hainan, 571101, China.
| | - Xiaowan Hou
- Key Laboratory of Hainan Province for Postharvest Physiology and Technology of Tropical Horticultural Products, South Subtropical Crops Research Institute, Chinese Academy of Tropical Agricultural Sciences, Zhanjiang, Guangdong, 524091, China.
| | - Caihong Jia
- Key Laboratory of Biology and Genetic Resources of Tropical Crops, Institute of Tropical Bioscience and Biotechnology, Chinese Academy of Tropical Agricultural Sciences, Haikou, Hainan, 571101, China; Hainan Academy of Tropical Agricultural Resource, Haikou, Hainan, 571101, China.
| | - Jingyang Li
- Key Laboratory of Genetic Improvement of Bananas, Haikou Experimental Station, Chinese Academy of Tropical Agricultural Sciences, Haikou, Hainan, 571101, China.
| | - Hongxia Miao
- Key Laboratory of Biology and Genetic Resources of Tropical Crops, Institute of Tropical Bioscience and Biotechnology, Chinese Academy of Tropical Agricultural Sciences, Haikou, Hainan, 571101, China; Hainan Academy of Tropical Agricultural Resource, Haikou, Hainan, 571101, China.
| | - Zhuo Wang
- Key Laboratory of Biology and Genetic Resources of Tropical Crops, Institute of Tropical Bioscience and Biotechnology, Chinese Academy of Tropical Agricultural Sciences, Haikou, Hainan, 571101, China; Hainan Academy of Tropical Agricultural Resource, Haikou, Hainan, 571101, China.
| | - Weiwei Tie
- Key Laboratory of Biology and Genetic Resources of Tropical Crops, Institute of Tropical Bioscience and Biotechnology, Chinese Academy of Tropical Agricultural Sciences, Haikou, Hainan, 571101, China; Hainan Academy of Tropical Agricultural Resource, Haikou, Hainan, 571101, China.
| | - Biyu Xu
- Key Laboratory of Biology and Genetic Resources of Tropical Crops, Institute of Tropical Bioscience and Biotechnology, Chinese Academy of Tropical Agricultural Sciences, Haikou, Hainan, 571101, China; Hainan Academy of Tropical Agricultural Resource, Haikou, Hainan, 571101, China.
| | - Zhiqiang Jin
- Key Laboratory of Genetic Improvement of Bananas, Haikou Experimental Station, Chinese Academy of Tropical Agricultural Sciences, Haikou, Hainan, 571101, China; Key Laboratory of Biology and Genetic Resources of Tropical Crops, Institute of Tropical Bioscience and Biotechnology, Chinese Academy of Tropical Agricultural Sciences, Haikou, Hainan, 571101, China; Hainan Academy of Tropical Agricultural Resource, Haikou, Hainan, 571101, China.
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The Tonoplast Intrinsic Protein Gene KvTIP3 is Responsive to Different Abiotic Stresses in Kosteletzkya virginica. BIOMED RESEARCH INTERNATIONAL 2020; 2020:2895795. [PMID: 31998785 PMCID: PMC6970491 DOI: 10.1155/2020/2895795] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/28/2019] [Revised: 11/18/2019] [Accepted: 12/04/2019] [Indexed: 11/21/2022]
Abstract
In higher plants, aquaporin proteins (AQPs) play important roles in the uptake of water across cell membranes. However, their functions in halophytes are still largely unknown. In this work, we isolated, cloned, and identified KvTIP3, a tonoplast intrinsic protein gene from Kosteletzkya virginica. Bioinformatic analyses demonstrated that KvTIP3 encoded a tonoplast protein with the common properties of AQPs. Further multiple sequence alignment and phylogenetic analyses showed that KvTIP3 shared 65%–82% homology with other AQPs from Arabidopsis, cotton, polar, and cocoa. Quantitative real-time PCR (qPCR) analyses revealed that KvTIP3 was ubiquitously expressed in various tissues such as leaves, stems, and roots, with a predominant expression in roots. In addition, KvTIP3 transcript was strongly induced by NaCl, low temperature, and ABA in K. virginica. Our findings suggest that KvTIP3 encodes a new AQP possibly involved in multiple abiotic stress responses in K. virginica, and KvTIP3 could be used as a potential candidate gene for the improvement of plants resistant to various abiotic stresses.
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Hussain A, Tanveer R, Mustafa G, Farooq M, Amin I, Mansoor S. Comparative phylogenetic analysis of aquaporins provides insight into the gene family expansion and evolution in plants and their role in drought tolerant and susceptible chickpea cultivars. Genomics 2020; 112:263-275. [DOI: 10.1016/j.ygeno.2019.02.005] [Citation(s) in RCA: 22] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2018] [Revised: 01/21/2019] [Accepted: 02/07/2019] [Indexed: 12/16/2022]
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Bezerra-Neto JP, de Araújo FC, Ferreira-Neto JRC, da Silva MD, Pandolfi V, Aburjaile FF, Sakamoto T, de Oliveira Silva RL, Kido EA, Barbosa Amorim LL, Ortega JM, Benko-Iseppon AM. Plant Aquaporins: Diversity, Evolution and Biotechnological Applications. Curr Protein Pept Sci 2019; 20:368-395. [PMID: 30387391 DOI: 10.2174/1389203720666181102095910] [Citation(s) in RCA: 30] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/20/2018] [Revised: 10/24/2018] [Accepted: 10/30/2018] [Indexed: 12/20/2022]
Abstract
The plasma membrane forms a permeable barrier that separates the cytoplasm from the external environment, defining the physical and chemical limits in each cell in all organisms. The movement of molecules and ions into and out of cells is controlled by the plasma membrane as a critical process for cell stability and survival, maintaining essential differences between the composition of the extracellular fluid and the cytosol. In this process aquaporins (AQPs) figure as important actors, comprising highly conserved membrane proteins that carry water, glycerol and other hydrophilic molecules through biomembranes, including the cell wall and membranes of cytoplasmic organelles. While mammals have 15 types of AQPs described so far (displaying 18 paralogs), a single plant species can present more than 120 isoforms, providing transport of different types of solutes. Such aquaporins may be present in the whole plant or can be associated with different tissues or situations, including biotic and especially abiotic stresses, such as drought, salinity or tolerance to soils rich in heavy metals, for instance. The present review addresses several aspects of plant aquaporins, from their structure, classification, and function, to in silico methodologies for their analysis and identification in transcriptomes and genomes. Aspects of evolution and diversification of AQPs (with a focus on plants) are approached for the first time with the aid of the LCA (Last Common Ancestor) analysis. Finally, the main practical applications involving the use of AQPs are discussed, including patents and future perspectives involving this important protein family.
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Affiliation(s)
- João P Bezerra-Neto
- Universidade Federal de Pernambuco, Genetics Department, Center of Biosciences, Av. Prof. Moraes Rego, 1235, 50.670-423, Recife, Pernambuco, Brazil
| | - Flávia Czekalski de Araújo
- Universidade Federal de Pernambuco, Genetics Department, Center of Biosciences, Av. Prof. Moraes Rego, 1235, 50.670-423, Recife, Pernambuco, Brazil
| | - José R C Ferreira-Neto
- Universidade Federal de Pernambuco, Genetics Department, Center of Biosciences, Av. Prof. Moraes Rego, 1235, 50.670-423, Recife, Pernambuco, Brazil
| | - Manassés D da Silva
- Universidade Federal de Pernambuco, Genetics Department, Center of Biosciences, Av. Prof. Moraes Rego, 1235, 50.670-423, Recife, Pernambuco, Brazil
| | - Valesca Pandolfi
- Universidade Federal de Pernambuco, Genetics Department, Center of Biosciences, Av. Prof. Moraes Rego, 1235, 50.670-423, Recife, Pernambuco, Brazil
| | - Flavia F Aburjaile
- Universidade Federal de Pernambuco, Genetics Department, Center of Biosciences, Av. Prof. Moraes Rego, 1235, 50.670-423, Recife, Pernambuco, Brazil
| | - Tetsu Sakamoto
- Universidade Federal de Minas Gerais, Department of Biochemistry and Immunology, Belo Horizonte, Brazil
| | - Roberta L de Oliveira Silva
- Universidade Federal de Pernambuco, Genetics Department, Center of Biosciences, Av. Prof. Moraes Rego, 1235, 50.670-423, Recife, Pernambuco, Brazil
| | - Ederson A Kido
- Universidade Federal de Pernambuco, Genetics Department, Center of Biosciences, Av. Prof. Moraes Rego, 1235, 50.670-423, Recife, Pernambuco, Brazil
| | - Lidiane L Barbosa Amorim
- Universidade Federal de Pernambuco, Genetics Department, Center of Biosciences, Av. Prof. Moraes Rego, 1235, 50.670-423, Recife, Pernambuco, Brazil.,Instituto Federal de Educação, Ciência e Tecnologia do Piauí, Campus Oeiras, Avenida Projetada, s/n, 64.500-000, Oeiras, Piauí, Brazil
| | - José M Ortega
- Universidade Federal de Minas Gerais, Department of Biochemistry and Immunology, Belo Horizonte, Brazil
| | - Ana M Benko-Iseppon
- Universidade Federal de Pernambuco, Genetics Department, Center of Biosciences, Av. Prof. Moraes Rego, 1235, 50.670-423, Recife, Pernambuco, Brazil
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Zhang H, Cheng G, Yang Z, Wang T, Xu J. Identification of Sugarcane Host Factors Interacting with the 6K2 Protein of the Sugarcane Mosaic Virus. Int J Mol Sci 2019; 20:ijms20163867. [PMID: 31398864 PMCID: PMC6719097 DOI: 10.3390/ijms20163867] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/22/2019] [Revised: 08/03/2019] [Accepted: 08/06/2019] [Indexed: 12/26/2022] Open
Abstract
The 6K2 protein of potyviruses plays a key role in the viral infection in plants. In the present study, the coding sequence of 6K2 was cloned from Sugarcane mosaic virus (SCMV) strain FZ1 into pBT3-STE to generate the plasmid pBT3-STE-6K2, which was used as bait to screen a cDNA library prepared from sugarcane plants infected with SCMV based on the DUALmembrane system. One hundred and fifty-seven positive colonies were screened and sequenced, and the corresponding full-length genes were cloned from sugarcane cultivar ROC22. Then, 24 genes with annotations were obtained, and the deduced proteins were classified into three groups, in which eight proteins were involved in the stress response, 12 proteins were involved in transport, and four proteins were involved in photosynthesis based on their biological functions. Of the 24 proteins, 20 proteins were verified to interact with SCMV-6K2 by yeast two-hybrid assays. The possible roles of these proteins in SCMV infection on sugarcane are analyzed and discussed. This is the first report on the interaction of SCMV-6K2 with host factors from sugarcane, and will improve knowledge on the mechanism of SCMV infection in sugarcane.
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Affiliation(s)
- Hai Zhang
- National Engineering Research Center for Sugarcane, Key Laboratory of Sugarcane Biology and Genetic Breeding, Ministry of Agriculture, Key Laboratory of Ministry of Education for Genetics, Breeding and Multiple Utilization of Crops, College of Crop Science, Fujian Agriculture and Forestry University, Fuzhou 350002, China
| | - Guangyuan Cheng
- National Engineering Research Center for Sugarcane, Key Laboratory of Sugarcane Biology and Genetic Breeding, Ministry of Agriculture, Key Laboratory of Ministry of Education for Genetics, Breeding and Multiple Utilization of Crops, College of Crop Science, Fujian Agriculture and Forestry University, Fuzhou 350002, China
| | - Zongtao Yang
- National Engineering Research Center for Sugarcane, Key Laboratory of Sugarcane Biology and Genetic Breeding, Ministry of Agriculture, Key Laboratory of Ministry of Education for Genetics, Breeding and Multiple Utilization of Crops, College of Crop Science, Fujian Agriculture and Forestry University, Fuzhou 350002, China
| | - Tong Wang
- National Engineering Research Center for Sugarcane, Key Laboratory of Sugarcane Biology and Genetic Breeding, Ministry of Agriculture, Key Laboratory of Ministry of Education for Genetics, Breeding and Multiple Utilization of Crops, College of Crop Science, Fujian Agriculture and Forestry University, Fuzhou 350002, China
| | - Jingsheng Xu
- National Engineering Research Center for Sugarcane, Key Laboratory of Sugarcane Biology and Genetic Breeding, Ministry of Agriculture, Key Laboratory of Ministry of Education for Genetics, Breeding and Multiple Utilization of Crops, College of Crop Science, Fujian Agriculture and Forestry University, Fuzhou 350002, China.
- State Key Laboratory for Protection and Utilization of Subtropical Agro-bioresources, Guangxi University, Nanning 530004, China.
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Zhu YX, Yang L, Liu N, Yang J, Zhou XK, Xia YC, He Y, He YQ, Gong HJ, Ma DF, Yin JL. Genome-wide identification, structure characterization, and expression pattern profiling of aquaporin gene family in cucumber. BMC PLANT BIOLOGY 2019; 19:345. [PMID: 31390991 PMCID: PMC6686268 DOI: 10.1186/s12870-019-1953-1] [Citation(s) in RCA: 49] [Impact Index Per Article: 9.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/03/2019] [Accepted: 07/31/2019] [Indexed: 05/20/2023]
Abstract
BACKGROUND Aquaporin (AQP) proteins comprise a group of membrane intrinsic proteins (MIPs) that are responsible for transporting water and other small molecules, which is crucial for plant survival under stress conditions including salt stress. Despite the vital role of AQPs, little is known about them in cucumber (Cucumis sativus L.). RESULTS In this study, we identified 39 aquaporin-encoding genes in cucumber that were separated by phylogenetic analysis into five sub-families (PIP, TIP, NIP, SIP, and XIP). Their substrate specificity was then assessed based on key amino acid residues such as the aromatic/Arginine (ar/R) selectivity filter, Froger's positions, and specificity-determining positions. The putative cis-regulatory motifs available in the promoter region of each AQP gene were analyzed and results revealed that their promoter regions contain many abiotic related cis-regulatory elements. Furthermore, analysis of previously released RNA-seq data revealed tissue- and treatment-specific expression patterns of cucumber AQP genes (CsAQPs). Three aquaporins (CsTIP1;1, CsPIP2;4, and CsPIP1;2) were the most transcript abundance genes, with CsTIP1;1 showing the highest expression levels among all aquaporins. Subcellular localization analysis in Nicotiana benthamiana epidermal cells revealed the diverse and broad array of sub-cellular localizations of CsAQPs. We then performed RNA-seq to identify the expression pattern of CsAQPs under salt stress and found a general decreased expression level of root CsAQPs. Moreover, qRT-PCR revealed rapid changes in the expression levels of CsAQPs in response to diverse abiotic stresses including salt, polyethylene glycol (PEG)-6000, heat, and chilling stresses. Additionally, transient expression of AQPs in N. benthamiana increased leaf water loss rate, suggesting their potential roles in the regulation of plant water status under stress conditions. CONCLUSIONS Our results indicated that CsAQPs play important roles in response to salt stress. The genome-wide identification and primary function characterization of cucumber aquaporins provides insight to elucidate the complexity of the AQP gene family and their biological functions in cucumber.
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Affiliation(s)
- Yong-Xing Zhu
- Hubei Key Laboratory of Waterlogging Disaster and Agricultural Use of Wetland/College of Horticulture and Gardening, Yangtze University, Jingzhou, 434000 Hubei China
| | - Lei Yang
- Hubei Key Laboratory of Waterlogging Disaster and Agricultural Use of Wetland/College of Horticulture and Gardening, Yangtze University, Jingzhou, 434000 Hubei China
| | - Ning Liu
- Hubei Key Laboratory of Waterlogging Disaster and Agricultural Use of Wetland/College of Horticulture and Gardening, Yangtze University, Jingzhou, 434000 Hubei China
| | - Jie Yang
- Hubei Key Laboratory of Waterlogging Disaster and Agricultural Use of Wetland/College of Horticulture and Gardening, Yangtze University, Jingzhou, 434000 Hubei China
| | - Xiao-Kang Zhou
- Hubei Key Laboratory of Waterlogging Disaster and Agricultural Use of Wetland/College of Horticulture and Gardening, Yangtze University, Jingzhou, 434000 Hubei China
| | - Yu-Chen Xia
- Hubei Key Laboratory of Waterlogging Disaster and Agricultural Use of Wetland/College of Horticulture and Gardening, Yangtze University, Jingzhou, 434000 Hubei China
| | - Yang He
- Hubei Key Laboratory of Waterlogging Disaster and Agricultural Use of Wetland/College of Horticulture and Gardening, Yangtze University, Jingzhou, 434000 Hubei China
| | - Yi-Qin He
- Hubei Key Laboratory of Waterlogging Disaster and Agricultural Use of Wetland/College of Horticulture and Gardening, Yangtze University, Jingzhou, 434000 Hubei China
| | - Hai-Jun Gong
- College of Horticulture, Northwest A and F University, Yangling, 712100 Shaanxi China
| | - Dong-Fang Ma
- Hubei Key Laboratory of Waterlogging Disaster and Agricultural Use of Wetland/College of Horticulture and Gardening, Yangtze University, Jingzhou, 434000 Hubei China
| | - Jun-Liang Yin
- Hubei Key Laboratory of Waterlogging Disaster and Agricultural Use of Wetland/College of Horticulture and Gardening, Yangtze University, Jingzhou, 434000 Hubei China
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Li W, Zhang D, Zhu G, Mi X, Guo W. Combining genome-wide and transcriptome-wide analyses reveal the evolutionary conservation and functional diversity of aquaporins in cotton. BMC Genomics 2019; 20:538. [PMID: 31262248 PMCID: PMC6604486 DOI: 10.1186/s12864-019-5928-2] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/04/2018] [Accepted: 06/23/2019] [Indexed: 12/13/2022] Open
Abstract
BACKGROUND Aquaporins (AQPs) are integral membrane proteins from a larger family of major intrinsic proteins (MIPs) and function in a huge variety of processes such as water transport, plant growth and stress response. The availability of the whole-genome data of different cotton species allows us to study systematic evolution and function of cotton AQPs on a genome-wide level. RESULTS Here, a total of 53, 58, 113 and 111 AQP genes were identified in G. arboreum, G. raimondii, G. hirsutum and G. barbadense, respectively. A comprehensive analysis of cotton AQPs, involved in exon/intron structure, functional domains, phylogenetic relationships and gene duplications, divided these AQPs into five subfamilies (PIP, NIP, SIP, TIP and XIP). Comparative genome analysis among 30 species from algae to angiosperm as well as common tandem duplication events in 24 well-studied plants further revealed the evolutionary conservation of AQP family in the organism kingdom. Combining transcriptome analysis and Quantitative Real-time PCR (qRT-PCR) verification, most AQPs exhibited tissue-specific expression patterns both in G. raimondii and G. hirsutum. Meanwhile, a bias of time to peak expression of several AQPs was also detected after treating G. davidsonii and G. hirsutum with 200 mM NaCl. It is interesting that both PIP1;4 h/i/j and PIP2;2a/e showed the highly conserved tandem structure, but differentially contributed to tissue development and stress response in different cotton species. CONCLUSIONS These results demonstrated that cotton AQPs were structural conservation while experienced the functional differentiation during the process of evolution and domestication. This study will further broaden our insights into the evolution and functional elucidation of AQP gene family in cotton.
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Affiliation(s)
- Weixi Li
- State Key Laboratory of Crop Genetics & Germplasm Enhancement, Engineering Research Center of Hybrid Cotton Development Ministry of Education, Nanjing Agricultural University, Nanjing, 210095, Jiangsu Province, People's Republic of China
| | - Dayong Zhang
- State Key Laboratory of Crop Genetics & Germplasm Enhancement, Engineering Research Center of Hybrid Cotton Development Ministry of Education, Nanjing Agricultural University, Nanjing, 210095, Jiangsu Province, People's Republic of China
| | - Guozhong Zhu
- State Key Laboratory of Crop Genetics & Germplasm Enhancement, Engineering Research Center of Hybrid Cotton Development Ministry of Education, Nanjing Agricultural University, Nanjing, 210095, Jiangsu Province, People's Republic of China
| | - Xinyue Mi
- State Key Laboratory of Crop Genetics & Germplasm Enhancement, Engineering Research Center of Hybrid Cotton Development Ministry of Education, Nanjing Agricultural University, Nanjing, 210095, Jiangsu Province, People's Republic of China
| | - Wangzhen Guo
- State Key Laboratory of Crop Genetics & Germplasm Enhancement, Engineering Research Center of Hybrid Cotton Development Ministry of Education, Nanjing Agricultural University, Nanjing, 210095, Jiangsu Province, People's Republic of China.
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Quiroga G, Erice G, Ding L, Chaumont F, Aroca R, Ruiz-Lozano JM. The arbuscular mycorrhizal symbiosis regulates aquaporins activity and improves root cell water permeability in maize plants subjected to water stress. PLANT, CELL & ENVIRONMENT 2019; 42:2274-2290. [PMID: 30916398 DOI: 10.1111/pce.13551] [Citation(s) in RCA: 50] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/04/2018] [Revised: 02/25/2019] [Accepted: 03/22/2019] [Indexed: 05/20/2023]
Abstract
Studies have suggested that increased root hydraulic conductivity in mycorrhizal roots could be the result of increased cell-to-cell water flux via aquaporins. This study aimed to elucidate if the key effect of the regulation of maize aquaporins by the arbuscular mycorrhizal (AM) symbiosis is the enhancement of root cell water transport capacity. Thus, water permeability coefficient (Pf ) and cell hydraulic conductivity (Lpc ) were measured in root protoplast and intact cortex cells of AM and non-AM plants subjected or not to water stress. Results showed that cells from droughted-AM roots maintained Pf and Lpc values of nonstressed plants, whereas in non-AM roots, these values declined drastically as a consequence of water deficit. Interestingly, the phosphorylation status of PIP2 aquaporins increased in AM plants subjected to water deficit, and Pf values higher than 12 μm s-1 were found only in protoplasts from AM roots, revealing the higher water permeability of AM root cells. In parallel, the AM symbiosis increased stomatal conductance, net photosynthesis, and related parameters, showing a higher photosynthetic capacity in these plants. This study demonstrates a better performance of AM root cells in water transport under water deficit, which is connected to the shoot physiological performance in terms of photosynthetic capacity.
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Affiliation(s)
- Gabriela Quiroga
- Departmento de Microbiología del Suelo y Sistemas Simbióticos, Estación Experimental del Zaidín (CSIC), 18008, Granada, Spain
| | - Gorka Erice
- Departmento de Microbiología del Suelo y Sistemas Simbióticos, Estación Experimental del Zaidín (CSIC), 18008, Granada, Spain
| | - Lei Ding
- Louvain Institute of Biomolecular Science and Technology, Université catholique de Louvain, B-1348, Louvain-la-Neuve, Belgium
| | - François Chaumont
- Louvain Institute of Biomolecular Science and Technology, Université catholique de Louvain, B-1348, Louvain-la-Neuve, Belgium
| | - Ricardo Aroca
- Departmento de Microbiología del Suelo y Sistemas Simbióticos, Estación Experimental del Zaidín (CSIC), 18008, Granada, Spain
| | - Juan Manuel Ruiz-Lozano
- Departmento de Microbiología del Suelo y Sistemas Simbióticos, Estación Experimental del Zaidín (CSIC), 18008, Granada, Spain
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Matiz A, Cambuí CA, Richet N, Mioto PT, Gomes F, Pikart FC, Chaumont F, Gaspar M, Mercier H. Involvement of aquaporins on nitrogen-acquisition strategies of juvenile and adult plants of an epiphytic tank-forming bromeliad. PLANTA 2019; 250:319-332. [PMID: 31030328 DOI: 10.1007/s00425-019-03174-7] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/23/2019] [Accepted: 04/25/2019] [Indexed: 06/09/2023]
Abstract
Depending on the N source and plant ontogenetic state, the epiphytic tank-forming bromeliad Vriesea gigantea can modulate aquaporin expression to maximize the absorption of the most available nitrogen source. Epiphytic bromeliads frequently present a structure formed by the overlapping of leaf bases where water and nutrients can be accumulated and absorbed, called tank. However, this structure is not present during the juvenile ontogenetic phase, leading to differences in nutrient acquisition strategies. Recent studies have shown a high capacity of the bromeliad Vriesea gigantea, an epiphytic tank-forming bromeliad, to absorb urea by their leaves. Since plant aquaporins can facilitate the diffusion of urea through the membranes, we cloned three foliar aquaporin genes, VgPIP1;1, VgPIP1;2 and VgTIP2;1 from V. gigantea plants. Through functional studies, we observed that besides water, VgTIP2;1 was capable of transporting urea while VgPIP1;2 may facilitate ammonium/ammonia diffusion. Moreover, aiming at identifying urea and ammonium-induced changes in aquaporin expression in leaves of juvenile and adult-tank plants, we showed that VgPIP1;1 and VgPIP1;2 transcripts were up-regulated in response to either urea or ammonium only in juvenile plants, while VgTIP2;1 was up-regulated in response to urea only in adult-tank plants. Thereby, an ontogenetic shift from juvenile to adult-tank-forming-plant appears to occur with metabolic changes regarding nitrogen metabolism regulation. Investigating urea metabolism in wild species that naturally cope with organic N sources, such as V. gigantea, may provide the knowledge to modify nitrogen use efficiency of crop plants.
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Affiliation(s)
- Alejandra Matiz
- Department of Botany, Institute of Biosciences, University of São Paulo, São Paulo, SP, CEP 05508-090, Brazil.
| | - Camila Aguetoni Cambuí
- Department of Botany, Institute of Biosciences, University of São Paulo, São Paulo, SP, CEP 05508-090, Brazil
| | - Nicolas Richet
- Louvain Institute of Biomolecular Science and Technology, UCLouvain, Croix du Sud 4-L7.07.14, 1348, Louvain-la-Neuve, Belgium
| | - Paulo Tamaso Mioto
- Department of Botany, Biological Sciences Center, Federal University of Santa Catarina, Campus Reitor João David Ferreira Lima, s/n, Florianópolis, SC, CEP 88040-900, Brazil
| | - Fernando Gomes
- Department of Genetics and Evolutionary Biology, Institute of Biosciences, University of São Paulo, São Paulo, SP, CEP 05508-090, Brazil
| | - Filipe Christian Pikart
- Department of Botany, Institute of Biosciences, University of São Paulo, São Paulo, SP, CEP 05508-090, Brazil
| | - François Chaumont
- Louvain Institute of Biomolecular Science and Technology, UCLouvain, Croix du Sud 4-L7.07.14, 1348, Louvain-la-Neuve, Belgium
| | - Marília Gaspar
- Department of Plant Physiology and Biochemistry, Institute of Botany, São Paulo, SP, CEP 04301-912, Brazil
| | - Helenice Mercier
- Department of Botany, Institute of Biosciences, University of São Paulo, São Paulo, SP, CEP 05508-090, Brazil
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Zhang L, Chen L, Dong H. Plant Aquaporins in Infection by and Immunity Against Pathogens - A Critical Review. FRONTIERS IN PLANT SCIENCE 2019; 10:632. [PMID: 31191567 PMCID: PMC6546722 DOI: 10.3389/fpls.2019.00632] [Citation(s) in RCA: 29] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/08/2019] [Accepted: 04/26/2019] [Indexed: 05/18/2023]
Abstract
Plant aquaporins (AQPs) of the plasma membrane intrinsic protein (PIP) family face constant risk of hijack by pathogens aiming to infect plants. PIPs can also be involved in plant immunity against infection. This review will utilize two case studies to discuss biochemical and structural mechanisms that govern the functions of PIPs in the regulation of plant infection and immunity. The first example concerns the interaction between rice Oryza sativa and the bacterial blight pathogen Xanthomonas oryzae pv. oryzae (Xoo). To infect rice, Xoo uses the type III (T3) secretion system to secrete the proteic translocator Hpa1, and Hpa1 subsequently mediates the translocation of T3 effectors secreted by this system. Once shifted from bacteria into rice cells, effectors exert virulent or avirulent effects depending on the susceptibility of the rice varieties. The translocator function of Hpa1 requires cooperation with OsPIP1;3, the rice interactor of Hpa1. This role of OsPIP1;3 is related to regulatory models of effector translocation. The regulatory models have been proposed as, translocon-dependent delivery, translocon-independent pore formation, and effector endocytosis with membrane protein/lipid trafficking. The second case study includes the interaction of Hpa1 with the H2O2 transport channel AtPIP1;4, and the associated consequence for H2O2 signal transduction of immunity pathways in Arabidopsis thaliana, a non-host of Xoo. H2O2 is generated in the apoplast upon induction by a pathogen or microbial pattern. H2O2 from this source translocates quickly into Arabidopsis cells, where it interacts with pathways of intracellular immunity to confer plant resistance against diseases. To expedite H2O2 transport, AtPIP1;4 must adopt a specific conformation in a number of ways, including channel width extension through amino acid interactions and selectivity for H2O2 through amino acid protonation and tautomeric reactions. Both topics will reference relevant studies, conducted on other organisms and AQPs, to highlight possible mechanisms of T3 effector translocation currently under debate, and highlight the structural basis of AtPIP1;4 in H2O2 transport facilitated by gating and trafficking regulation.
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Affiliation(s)
- Liyuan Zhang
- Plant Immunity Research Group, National Key Laboratory of Crop Science, Department of Plant Pathology, Shandong Agricultural University, Tai’an, China
| | - Lei Chen
- Plant Immunity Research Group, National Key Laboratory of Crop Science, Department of Plant Pathology, Shandong Agricultural University, Tai’an, China
| | - Hansong Dong
- Plant Immunity Research Group, National Key Laboratory of Crop Science, Department of Plant Pathology, Shandong Agricultural University, Tai’an, China
- Plant Immunity Laboratory, Department of Plant Pathology, Nanjing Agricultural University, Nanjing, China
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Van Gansbeke B, Khoo KHP, Lewis JG, Chalmers KJ, Mather DE. Fine mapping of Rha2 in barley reveals candidate genes for resistance against cereal cyst nematode. TAG. THEORETICAL AND APPLIED GENETICS. THEORETISCHE UND ANGEWANDTE GENETIK 2019; 132:1309-1320. [PMID: 30656354 PMCID: PMC6476833 DOI: 10.1007/s00122-019-03279-3] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/20/2018] [Accepted: 01/07/2019] [Indexed: 05/29/2023]
Abstract
The cereal cyst nematode resistance locus Rha2 was mapped to a 978 kbp region on the long arm of barley chromosome 2H. Three candidate genes are discussed. The cereal cyst nematode (CCN) Heterodera avenae is a soil-borne obligate parasite that can cause severe damage to cereals. This research involved fine mapping of Rha2, a CCN resistance locus on chromosome 2H of barley. Rha2 was previously mapped relative to restriction fragment length polymorphisms (RFLPs) in two mapping populations. Anchoring of flanking RFLP clone sequences to the barley genome assembly defined an interval of 5077 kbp. Genotyping-by-sequencing of resistant and susceptible materials led to the discovery of potentially useful single nucleotide polymorphisms (SNPs). Assays were designed for these SNPs and applied to mapping populations. This narrowed the region of interest to 3966 kbp. Further fine mapping was pursued by crossing and backcrossing the resistant cultivar Sloop SA to its susceptible ancestor Sloop. Evaluation of F2 progeny confirmed that the resistance segregates as a single dominant gene. Genotyping of 9003 BC2F2 progeny identified recombinants. Evaluation of recombinant BC2F3 progeny narrowed the region of interest to 978 kbp. Two of the SNPs within this region proved to be diagnostic of CCN resistance across a wide range of barley germplasm. Fluorescence-based and gel-based assays were developed for these SNPs for use in marker-assisted selection. Within the candidate region of the reference genome, there are nine high-confidence predicted genes. Three of these, one that encodes RAR1 (a cysteine- and histidine-rich domain-containing protein), one that is predicted to encode an acetylglutamate kinase and one that is predicted to encode a tonoplast intrinsic protein, are discussed as candidate genes for CCN resistance.
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Affiliation(s)
- Bart Van Gansbeke
- School of Agriculture, Food and Wine, Waite Research Institute, The University of Adelaide, PMB 1, Glen Osmond, SA, 5064, Australia
| | - Kelvin H P Khoo
- School of Agriculture, Food and Wine, Waite Research Institute, The University of Adelaide, PMB 1, Glen Osmond, SA, 5064, Australia
| | - John G Lewis
- South Australian Research and Development Institute, GPO Box 397, Adelaide, SA, 5001, Australia
| | - Kenneth J Chalmers
- School of Agriculture, Food and Wine, Waite Research Institute, The University of Adelaide, PMB 1, Glen Osmond, SA, 5064, Australia
| | - Diane E Mather
- School of Agriculture, Food and Wine, Waite Research Institute, The University of Adelaide, PMB 1, Glen Osmond, SA, 5064, Australia.
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71
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Shivaraj SM, Deshmukh R, Sonah H, Bélanger RR. Identification and characterization of aquaporin genes in Arachis duranensis and Arachis ipaensis genomes, the diploid progenitors of peanut. BMC Genomics 2019; 20:222. [PMID: 30885116 PMCID: PMC6423786 DOI: 10.1186/s12864-019-5606-4] [Citation(s) in RCA: 20] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2018] [Accepted: 03/13/2019] [Indexed: 12/13/2022] Open
Abstract
Background Aquaporins (AQPs) facilitate transport of water and small solutes across cell membranes and play an important role in different physiological processes in plants. Despite their importance, limited data is available about AQP distribution and function in the economically important oilseed crop peanut, Arachis hypogea (AABB). The present study reports the identification and structural and expression analysis of the AQPs found in the diploid progenitor genomes of A. hypogea i.e. Arachis duranensis (AA) and Arachis ipaensis (BB). Results Genome-wide analysis revealed the presence of 32 and 36 AQPs in A. duranensis and A. ipaensis, respectively. Phylogenetic analysis showed similar numbers of AQPs clustered in five distinct subfamilies including the plasma membrane intrinsic proteins (PIPs), the tonoplast intrinsic proteins (TIPs), the nodulin 26-like intrinsic proteins (NIPs), the small basic intrinsic proteins (SIPs), and the uncharacterized intrinsic proteins (XIPs). A notable exception was the XIP subfamily where XIP1 group was observed only in A. ipaensis genome. Protein structure evaluation showed a hydrophilic aromatic/arginine (ar/R) selectivity filter (SF) in PIPs whereas other subfamilies mostly contained a hydrophobic ar/R SF. Both genomes contained one NIP2 with a GSGR SF indicating a conserved ability within the genus to uptake silicon. Analysis of RNA-seq data from A. hypogea revealed a similar expression pattern for the different AQP paralogs of AA and BB genomes. The TIP3s showed seed-specific expression while the NIP1s’ expression was confined to roots and root nodules. Conclusions The identification and the phylogenetic analysis of AQPs in both Arachis species revealed the presence of all five sub-families of AQPs. Within the NIP subfamily, the presence of a NIP2 in both genomes supports a conserved ability to absorb Si within plants of the genus. The global expression profile of AQPs in A. hypogea revealed a similar pattern of AQP expression regardless of the subfamilies or the genomes. The tissue-specific expression of AQPs suggests an important role in the development and function of the respective organs. The AQPs identified in the present study will serve as a resource for further characterization and possible exploitation of AQPs to understand their physiological role in A. hypogea. Electronic supplementary material The online version of this article (10.1186/s12864-019-5606-4) contains supplementary material, which is available to authorized users.
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Affiliation(s)
- S M Shivaraj
- Département de phytologie-Faculté des Sciences de l'agriculture et de l'alimentation, Université Laval, 2425 rue de l'Agriculture, Québec City, QC, G1V 0A6, Canada
| | - Rupesh Deshmukh
- National Agri-Food Biotechnology Institute (NABI), Mohali, India
| | - Humira Sonah
- National Agri-Food Biotechnology Institute (NABI), Mohali, India
| | - Richard R Bélanger
- Département de phytologie-Faculté des Sciences de l'agriculture et de l'alimentation, Université Laval, 2425 rue de l'Agriculture, Québec City, QC, G1V 0A6, Canada.
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72
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Wei X, Jin X, Ndayambaza B, Min X, Zhang Z, Wang Y, Liu W. Transcriptome-Wide Characterization and Functional Identification of the Aquaporin Gene Family During Drought Stress in Common Vetch. DNA Cell Biol 2019; 38:374-384. [PMID: 30807211 DOI: 10.1089/dna.2018.4562] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/16/2023] Open
Abstract
Aquaporins (AQPs) are transmembrane channels that are essential for the movement of water and other small molecules between biofilms in various physiological processes in plants. In this study, based on transcriptome-wide data, we identified and described a total of 21 AQP genes in common vetch (Vicia sativa subsp. sativa), which is an economically important pasture legume worldwide. Based on phylogenetic analyses, the VsAQPs were sorted into four subfamilies, including four plasma membrane intrinsic proteins (PIPs), six tonoplast intrinsic proteins (TIPs), seven NOD26-like intrinsic proteins, and four small basic intrinsic proteins. Furthermore, chemical and physical properties of these VsAQPs, including the isoelectric point and theoretical molecular weight, were analyzed. Analyses of the AQP signature sequences and key residues indicated the substrate specificity of each VsAQP. A set of VsAQPs was selected for gene expression analysis in a number of tissues and after drought stress treatments using real-time quantitative reverse transcription/polymerase chain reaction assays. Most of the PIPs and TIPs were proposed to have critical roles in regulating the flow of water during drought stress. Heterologous expression experiments in yeast indicated that VsPIP1;2 and VsPIP2;2 are key candidate genes for improving drought stress tolerance. The results reported in this study could be a crucial resource for further practical analyses and for genetic improvement of drought stress tolerance in common vetch.
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Affiliation(s)
- Xingyi Wei
- State Key Laboratory of Grassland Agro-ecosystems, Key Laboratory of Grassland Livestock Industry Innovation, Ministry of Agriculture and Rural Affairs, Engineering Research Center of Grassland Industry, Ministry of Education, College of Pastoral Agriculture Science and Technology, Lanzhou University, Lanzhou, P.R. China
| | - Xiaoyu Jin
- State Key Laboratory of Grassland Agro-ecosystems, Key Laboratory of Grassland Livestock Industry Innovation, Ministry of Agriculture and Rural Affairs, Engineering Research Center of Grassland Industry, Ministry of Education, College of Pastoral Agriculture Science and Technology, Lanzhou University, Lanzhou, P.R. China
| | - Boniface Ndayambaza
- State Key Laboratory of Grassland Agro-ecosystems, Key Laboratory of Grassland Livestock Industry Innovation, Ministry of Agriculture and Rural Affairs, Engineering Research Center of Grassland Industry, Ministry of Education, College of Pastoral Agriculture Science and Technology, Lanzhou University, Lanzhou, P.R. China
| | - Xueyang Min
- State Key Laboratory of Grassland Agro-ecosystems, Key Laboratory of Grassland Livestock Industry Innovation, Ministry of Agriculture and Rural Affairs, Engineering Research Center of Grassland Industry, Ministry of Education, College of Pastoral Agriculture Science and Technology, Lanzhou University, Lanzhou, P.R. China
| | - Zhengshe Zhang
- State Key Laboratory of Grassland Agro-ecosystems, Key Laboratory of Grassland Livestock Industry Innovation, Ministry of Agriculture and Rural Affairs, Engineering Research Center of Grassland Industry, Ministry of Education, College of Pastoral Agriculture Science and Technology, Lanzhou University, Lanzhou, P.R. China
| | - Yanrong Wang
- State Key Laboratory of Grassland Agro-ecosystems, Key Laboratory of Grassland Livestock Industry Innovation, Ministry of Agriculture and Rural Affairs, Engineering Research Center of Grassland Industry, Ministry of Education, College of Pastoral Agriculture Science and Technology, Lanzhou University, Lanzhou, P.R. China
| | - Wenxian Liu
- State Key Laboratory of Grassland Agro-ecosystems, Key Laboratory of Grassland Livestock Industry Innovation, Ministry of Agriculture and Rural Affairs, Engineering Research Center of Grassland Industry, Ministry of Education, College of Pastoral Agriculture Science and Technology, Lanzhou University, Lanzhou, P.R. China
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Hernández-Sánchez IE, Maruri-López I, Molphe-Balch EP, Becerra-Flora A, Jaimes-Miranda F, Jiménez-Bremont JF. Evidence for in vivo interactions between dehydrins and the aquaporin AtPIP2B. Biochem Biophys Res Commun 2019; 510:545-550. [PMID: 30738581 DOI: 10.1016/j.bbrc.2019.01.095] [Citation(s) in RCA: 21] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/16/2019] [Accepted: 01/19/2019] [Indexed: 11/29/2022]
Abstract
Plants have developed mechanisms that allow them to tolerate different abiotic stresses. Among these mechanisms, the accumulation of specific proteins such as dehydrins (DHNs) and aquaporins (AQPs) can protect other proteins from damage during dehydration and may allow the control of water loss, respectively. Although both types of proteins are involved in plant protection against dehydration stress, a direct interaction between them has not been explored. A previous screen to identify potential OpsDHN1 protein interactions revealed an aquaporin as a possible candidate. Here, we used the Bimolecular Fluorescence Complementation (BiFC) approach to investigate the direct interaction of the cactus OpsDHN1 protein with the Arabidopsis plasma membrane PIP family aquaporin AtPIP2B (At2G37170). Since AtPIP2B is a membrane protein and OpsDHN1 is a cytosolic protein that may be peripherally associated with membranes, we propose that OpsDHN1/AtPIP2B interaction takes place at cellular membranes. Furthermore, we also demonstrate the interaction of AtPIP2B with the three Arabidopsis dehydrins COR47 (AT1G20440), ERD10 (At1g20450), and RAB18 (At5g66400).
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Affiliation(s)
- Itzell Eurídice Hernández-Sánchez
- Laboratorio de Biología Molecular de Hongos y Plantas, División de Biología Molecular, Instituto Potosino de Investigación Científica y Tecnológica AC, San Luis Potosí, SLP, Mexico
| | - Israel Maruri-López
- Laboratorio de Biología Molecular de Hongos y Plantas, División de Biología Molecular, Instituto Potosino de Investigación Científica y Tecnológica AC, San Luis Potosí, SLP, Mexico
| | - Eugenio Pérez Molphe-Balch
- Unidad de Biotecnología Vegetal, Departamento de Química, Centro de Ciencias Básicas, Universidad Autónoma de Aguascalientes, Aguascalientes, Ags, Mexico
| | - Alicia Becerra-Flora
- Laboratorio de Biología Molecular de Hongos y Plantas, División de Biología Molecular, Instituto Potosino de Investigación Científica y Tecnológica AC, San Luis Potosí, SLP, Mexico
| | - Fabiola Jaimes-Miranda
- CONACyT-Instituto Potosino de Investigación Científica y Tecnológica AC, División de Biología Molecular, San Luis Potosí, SLP, Mexico.
| | - Juan F Jiménez-Bremont
- Laboratorio de Biología Molecular de Hongos y Plantas, División de Biología Molecular, Instituto Potosino de Investigación Científica y Tecnológica AC, San Luis Potosí, SLP, Mexico.
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74
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Ariani A, Barozzi F, Sebastiani L, di Toppi LS, di Sansebastiano GP, Andreucci A. AQUA1 is a mercury sensitive poplar aquaporin regulated at transcriptional and post-translational levels by Zn stress. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2019; 135:588-600. [PMID: 30424909 DOI: 10.1016/j.plaphy.2018.10.038] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/30/2018] [Revised: 10/30/2018] [Accepted: 10/30/2018] [Indexed: 05/19/2023]
Abstract
Aquaporins are water channel proteins that regulate plant development, growth, and response to environmental stresses. Populus trichocarpa is one of the plants with the highest number of aquaporins in its genome, but only few of them have been characterized at the whole plant functional level. Here we analyzed a putative aquaporin gene, aqua1, a gene that encodes for a protein of 257 amino acid with the typical NPA (Asp-Pro-Ala) signature motif of the aquaporin gene family. aqua1 was down-regulated of ∼10 fold under excess Zn in both leaves and roots, and conferred Zn tolerance when expressed in yeast Zn hypersensitive strain. In vivo localization of AQUA1-GFP in Arabidopsis protoplast showed a heterogeneous distribution of this protein on different membranes destined to form aggregates related to autophagic multivesicular bodies. Zn-dependent AQUA1-GFP re-localization was perturbed by phosphatases' and kinases' inhibitors that could affect both intracellular trafficking and aquaporins' activity. Exposed to high concentration of Zn, AQUA1 also co-localized with AtTIP1;1, a well-known Arabidopsis vacuolar marker, probably in pro-vacuolar multivesicular bodies. These findings suggest that high concentration of Zn down-regulates aqua1 and causes its re-localization in new forming pro-vacuoles. This Zn-dependent re-localization appears to be mediated by mechanisms regulating intracellular trafficking and aquaporins' post-translational modifications. This functional characterization of a poplar aquaporin in response to excess Zn will be a useful reference for understanding aquaporins' roles and regulation in response to high concentration of Zn in poplar.
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Affiliation(s)
- Andrea Ariani
- BioLabs, Institute of Life Sciences, Scuola Superiore Sant'Anna, Pisa, Italy
| | - Fabrizio Barozzi
- DISTEBA, Department of Biological and Environmental Sciences and Technologies, University of Salento, Via Prov. le Lecce - Monteroni, 73100, Lecce, Italy
| | - Luca Sebastiani
- BioLabs, Institute of Life Sciences, Scuola Superiore Sant'Anna, Pisa, Italy
| | | | - Gian Pietro di Sansebastiano
- DISTEBA, Department of Biological and Environmental Sciences and Technologies, University of Salento, Via Prov. le Lecce - Monteroni, 73100, Lecce, Italy
| | - Andrea Andreucci
- Department of Biology, Università degli Studi di Pisa, I-56126, Pisa, Italy.
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75
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Lechowska K, Kubala S, Wojtyla Ł, Nowaczyk G, Quinet M, Lutts S, Garnczarska M. New Insight on Water Status in Germinating Brassica napus Seeds in Relation to Priming-Improved Germination. Int J Mol Sci 2019; 20:E540. [PMID: 30696013 PMCID: PMC6387248 DOI: 10.3390/ijms20030540] [Citation(s) in RCA: 21] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/18/2018] [Revised: 01/21/2019] [Accepted: 01/25/2019] [Indexed: 12/20/2022] Open
Abstract
Seed priming is a pre-sowing method successfully used to improve seed germination. Since water plays a crucial role in germination, the aim of this study was to investigate the relationship between better germination performances of osmoprimed Brassica napus seeds and seed water status during germination. To achieve this goal, a combination of different kinds of approaches was used, including nuclear magnetic resonance (NMR) spectroscopy, TEM, and SEM as well as semi-quantitative PCR (semi-qPCR). The results of this study showed that osmopriming enhanced the kinetics of water uptake and the total amount of absorbed water during both the early imbibition stage and in the later phases of seed germination. The spin⁻spin relaxation time (T₂) measurement suggests that osmopriming causes faster water penetration into the seed and more efficient tissue hydration. Moreover, factors potentially affecting water relations in germinating primed seeds were also identified. It was shown that osmopriming (i) changes the microstructural features of the seed coat, e.g., leads to the formation of microcracks, (ii) alters the internal structure of the seed by the induction of additional void spaces in the seed, (iii) increases cotyledons cells vacuolization, and (iv) modifies the expression pattern of aquaporin genes.
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Affiliation(s)
- Katarzyna Lechowska
- Department of Plant Physiology, Institute of Experimental Biology, Faculty of Biology, Adam Mickiewicz University, Poznań, ul. Umultowska 89, 61-614 Poznań, Poland.
| | - Szymon Kubala
- Department of Plant Physiology, Institute of Experimental Biology, Faculty of Biology, Adam Mickiewicz University, Poznań, ul. Umultowska 89, 61-614 Poznań, Poland.
| | - Łukasz Wojtyla
- Department of Plant Physiology, Institute of Experimental Biology, Faculty of Biology, Adam Mickiewicz University, Poznań, ul. Umultowska 89, 61-614 Poznań, Poland.
| | - Grzegorz Nowaczyk
- NanoBioMedical Centre, Adam Mickiewicz University, Poznań, ul. Umultowska 85, 61-614 Poznań, Poland.
| | - Muriel Quinet
- Groupe de Recherche en Physiologie Végétale (GRPV), Earth and Life Institute⁻Agronomy (ELI-A), Université catholique de Louvain, Croix du Sud 45, boîte L7.07.13, B-1348 Louvain-la-Neuve, Belgium.
| | - Stanley Lutts
- Groupe de Recherche en Physiologie Végétale (GRPV), Earth and Life Institute⁻Agronomy (ELI-A), Université catholique de Louvain, Croix du Sud 45, boîte L7.07.13, B-1348 Louvain-la-Neuve, Belgium.
| | - Małgorzata Garnczarska
- Department of Plant Physiology, Institute of Experimental Biology, Faculty of Biology, Adam Mickiewicz University, Poznań, ul. Umultowska 89, 61-614 Poznań, Poland.
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76
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Feng ZJ, Liu N, Zhang GW, Niu FG, Xu SC, Gong YM. Investigation of the AQP Family in Soybean and the Promoter Activity of TIP2;6 in Heat Stress and Hormone Responses. Int J Mol Sci 2019; 20:E262. [PMID: 30634702 PMCID: PMC6359280 DOI: 10.3390/ijms20020262] [Citation(s) in RCA: 23] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/11/2018] [Revised: 12/29/2018] [Accepted: 01/07/2019] [Indexed: 12/22/2022] Open
Abstract
Aquaporins (AQPs) are one diverse family of membrane channel proteins that play crucial regulatory roles in plant stress physiology. However, the heat stress responsiveness of AQP genes in soybean remains poorly understood. In this study, 75 non-redundant AQP encoding genes were identified in soybean. Multiple sequence alignments showed that all GmAQP proteins possessed the conserved regions, which contained 6 trans-membrane domains (TM1 to TM6). Different GmAQP members consisted of distinct Asn-Pro-Ala (NPA) motifs, aromatic/arginine (ar/R) selectivity filters and Froger's positions (FPs). Phylogenetic analyses distinguished five sub-families within these GmAQPs: 24 GmPIPs, 24 GmTIPs, 17 GmNIPs, 8 GmSIPs, and 2 GmXIPs. Promoter cis-acting elements analyses revealed that distinct number and composition of heat stress and hormone responsive elements existed in different promoter regions of GmAQPs. QRT-PCR assays demonstrated that 12 candidate GmAQPs with relatively extensive expression in various tissues or high expression levels in root or leaf exhibited different expression changes under heat stress and hormone cues (abscisic acid (ABA), l-aminocyclopropane-l-carboxylic acid (ACC), salicylic acid (SA) and methyl jasmonate (MeJA)). Furthermore, the promoter activity of one previously functionally unknown AQP gene-GmTIP2;6 was investigated in transgenic Arabidopsis plants. The beta-glucuronidase (GUS) activity driven by the promoter of GmTIP2;6 was strongly induced in the heat- and ACC-treated transgenic plants and tended to be accumulated in the hypocotyls, vascular bundles, and leaf trichomes. These results will contribute to uncovering the potential functions and molecular mechanisms of soybean GmAQPs in mediating heat stress and hormone signal responses.
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Affiliation(s)
- Zhi-Juan Feng
- Institute of Vegetables, Zhejiang Academy of Agricultural Sciences, Hangzhou 310021, China.
| | - Na Liu
- Institute of Vegetables, Zhejiang Academy of Agricultural Sciences, Hangzhou 310021, China.
| | - Gu-Wen Zhang
- Institute of Vegetables, Zhejiang Academy of Agricultural Sciences, Hangzhou 310021, China.
| | - Fu-Ge Niu
- Food Safety Key Lab of Zhejiang Province, The School of Food Science and Biotechnology, Zhejiang Gongshang University, Hangzhou 310018, China.
| | - Sheng-Chun Xu
- Institute of Vegetables, Zhejiang Academy of Agricultural Sciences, Hangzhou 310021, China.
| | - Ya-Ming Gong
- Institute of Vegetables, Zhejiang Academy of Agricultural Sciences, Hangzhou 310021, China.
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77
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Khan S, Thomas BR, de la Mata R, Randall MJ, Zhang W, Zwiazek JJ. Variation in Aquaporin and Physiological Responses Among Pinus contorta Families Under Different Moisture Conditions. PLANTS 2019; 8:plants8010013. [PMID: 30621354 PMCID: PMC6359517 DOI: 10.3390/plants8010013] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/11/2018] [Revised: 12/22/2018] [Accepted: 12/31/2018] [Indexed: 01/05/2023]
Abstract
A population of eight open pollinated families of Pinus contorta was selected from sites varying in precipitation regimes and elevation to examine the possible role of aquaporins in adaptation to different moisture conditions. Five Pinus contorta aquaporins encoding PiconPIP2;1, PiconPIP2;2, PiconPIP2;3, PiconPIP1;2, and PiconTIP1;1 were cloned and detailed structural analyses were conducted to provide essential information that can explain their biological and molecular function. All five PiconAQPs contained hydrophilic aromatic/arginine selective filters to facilitate the transport of water. Transcript abundance patterns of PiconAQPs varied significantly across the P. contorta families under varying soil moisture conditions. The transcript abundance of five PiconPIPs remained unchanged under control and water-stress conditions in two families that originated from the sites with lower precipitation levels. These two families also displayed a different adaptive strategy of photosynthesis to cope with drought stress, which was manifested by reduced sensitivity in photosynthesis (maintaining the same rate) while exhibiting a reduction in stomatal conductance. In general, root:shoot ratios were not affected by drought stress, but some variation was observed between families. The results showed variability in drought coping mechanisms, including the expression of aquaporin genes and plant biomass allocation among eight families of Pinus contorta.
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Affiliation(s)
- Shanjida Khan
- Department of Renewable Resources, University of Alberta, 442 Earth Sciences Bldg., Edmonton, AB T6G 2E3, Canada.
| | - Barb R Thomas
- Department of Renewable Resources, University of Alberta, 442 Earth Sciences Bldg., Edmonton, AB T6G 2E3, Canada.
| | - Raul de la Mata
- Institut de Recerca i Tecnología Agroalimentàries (IRTA), Torre Marimon, 08140 Caldes de Montbui, Spain.
| | - Morgan J Randall
- Department of Renewable Resources, University of Alberta, 442 Earth Sciences Bldg., Edmonton, AB T6G 2E3, Canada.
| | - Wenqing Zhang
- Department of Renewable Resources, University of Alberta, 442 Earth Sciences Bldg., Edmonton, AB T6G 2E3, Canada.
| | - Janusz J Zwiazek
- Department of Renewable Resources, University of Alberta, 442 Earth Sciences Bldg., Edmonton, AB T6G 2E3, Canada.
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Wang H, Zhang L, Tao Y, Wang Z, Shen D, Dong H. Transmembrane Helices 2 and 3 Determine the Localization of Plasma Membrane Intrinsic Proteins in Eukaryotic Cells. FRONTIERS IN PLANT SCIENCE 2019; 10:1671. [PMID: 31998350 PMCID: PMC6966961 DOI: 10.3389/fpls.2019.01671] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/21/2019] [Accepted: 11/27/2019] [Indexed: 05/12/2023]
Abstract
In plants, plasma membrane intrinsic protein (PIP) PIP1s and PIP2s mediate the transport of disparate substrates across plasma membranes (PMs), with a prerequisite that the proteins correctly localize to the PMs. While PIP2s can take correct localization by themselves in plant cells, PIP1s cannot unless aided by a specific PIP2. Here, we analyzed the localization of the Arabidopsis aquaporins, AtPIP1s, AtPIP2;4, and their mutants in yeast, Xenopus oocytes, and protoplasts of Arabidopsis. Most of AtPIP2;4 localized in the PM when expressed alone, whereas AtPIP1;1 failed to realize it in yeast and Xenopus oocytes. Switch of the transmembrane helix 2 (TM2) or TM3 from AtPIP1;1 to AtPIP2;4 disabled the latter's PM targeting activity. Surprisingly, a replacement of TM2 and TM3 of AtPIP1;1 with those of AtPIP2;4 created a PM-localized AtPIP1;1 mutant, 1;1Δ(TM2+TM3)/2;4(TM2+TM3), which could act as a water and hydrogen peroxide channel just like AtPIP2;4. A localization and function analysis on mutants of AtPIP1;2, AtPIP1;3, AtPIP1;4, and AtPIP1;5, with the same replaced TM2 and TM3 from AtPIP2;4, showed that these AtPIP1 variants could also localize in the PM spontaneously, thus playing an inherent role in transporting solutes. Sequential and structural analysis suggested that a hydrophilic residue and a defective LxxxA motif are modulators of PM localization of AtPIP1s. These results indicate that TM2 and TM3 are necessary and, more importantly, sufficient in AtPIP2 for its PM localization.
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Affiliation(s)
- Hao Wang
- Department of Plant Pathology, Nanjing Agricultural University, Nanjing, China
| | - Liyuan Zhang
- Department of Plant Pathology, Shandong Agricultural University, Taian, China
- State Key Laboratory of Crop Biology, Taian, China
| | - Yuan Tao
- Department of Plant Pathology, Nanjing Agricultural University, Nanjing, China
| | - Zuodong Wang
- Department of Plant Pathology, Shandong Agricultural University, Taian, China
- State Key Laboratory of Crop Biology, Taian, China
| | - Dan Shen
- Department of Plant Pathology, Nanjing Agricultural University, Nanjing, China
- *Correspondence: Dan Shen, ; Hansong Dong,
| | - Hansong Dong
- Department of Plant Pathology, Nanjing Agricultural University, Nanjing, China
- Department of Plant Pathology, Shandong Agricultural University, Taian, China
- State Key Laboratory of Crop Biology, Taian, China
- *Correspondence: Dan Shen, ; Hansong Dong,
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79
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Molecular insights into the plasma membrane intrinsic proteins roles for abiotic stress and metalloids tolerance and transport in plants. ACTA ACUST UNITED AC 2018. [DOI: 10.1007/s40502-018-0425-1] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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Pawłowicz I, Masajada K. Aquaporins as a link between water relations and photosynthetic pathway in abiotic stress tolerance in plants. Gene 2018; 687:166-172. [PMID: 30445023 DOI: 10.1016/j.gene.2018.11.031] [Citation(s) in RCA: 30] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/20/2018] [Revised: 10/25/2018] [Accepted: 11/13/2018] [Indexed: 12/15/2022]
Abstract
Plant aquaporins constitute a large family of proteins involved in facilitating the transport of water and small neutral molecules across biological membranes. In higher plants they are divided into several sub-families, depending on membrane-type localization and permeability to specific solutes. They are abundantly expressed in the majority of plant organs and tissues, and play a function in primary biological processes. Many studies revealed the significant role of aquaporins in acquiring abiotic stresses' tolerance. This review focuses on aquaporins belonging to PIPs sub-family that are permeable to water and/or carbon dioxide. Isoforms transporting water are involved in hydraulic conductance regulation in the leaves and roots, whereas those transporting carbon dioxide control stomatal and mesophyll conductance in the leaves. Changes in PIP aquaporins abundance/activity in stress conditions allow to maintain the water balance and photosynthesis adjustment. Broad analyses showed that tight control between water and carbon dioxide supplementation mediated by aquaporins influences plant productivity, especially in stress conditions. Involvement of aquaporins in adaptation strategies to dehydrative stresses in different plant species are discussed in this review.
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Affiliation(s)
- Izabela Pawłowicz
- Institute of Plant Genetics, Polish Academy of Sciences, Strzeszynska 34, 60-479 Poznan, Poland.
| | - Katarzyna Masajada
- Institute of Plant Genetics, Polish Academy of Sciences, Strzeszynska 34, 60-479 Poznan, Poland
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81
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Sun H, Wang S, Lou Y, Zhu C, Zhao H, Li Y, Li X, Gao Z. Whole-Genome and Expression Analyses of Bamboo Aquaporin Genes Reveal Their Functions Involved in Maintaining Diurnal Water Balance in Bamboo Shoots. Cells 2018; 7:cells7110195. [PMID: 30400256 PMCID: PMC6262470 DOI: 10.3390/cells7110195] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2018] [Revised: 10/28/2018] [Accepted: 10/30/2018] [Indexed: 12/13/2022] Open
Abstract
Water supply is essential for maintaining normal physiological function during the rapid growth of bamboo. Aquaporins (AQPs) play crucial roles in water transport for plant growth and development. Although 26 PeAQPs in bamboo have been reported, the aquaporin-led mechanism of maintaining diurnal water balance in bamboo shoots remains unclear. In this study, a total of 63 PeAQPs were identified, based on the updated genome of moso bamboo (Phyllostachys edulis), including 22 PePIPs, 20 PeTIPs, 17 PeNIPs, and 4 PeSIPs. All of the PeAQPs were differently expressed in 26 different tissues of moso bamboo, based on RNA sequencing (RNA-seq) data. The root pressure in shoots showed circadian rhythm changes, with positive values at night and negative values in the daytime. The quantitative real-time PCR (qRT-PCR) result showed that 25 PeAQPs were detected in the base part of the shoots, and most of them demonstrated diurnal rhythm changes. The expression levels of some PeAQPs were significantly correlated with the root pressure. Of the 86 sugar transport genes, 33 had positive co-expression relationships with 27 PeAQPs. Two root pressure-correlated PeAQPs, PeTIP4;1 and PeTIP4;2, were confirmed to be highly expressed in the parenchyma and epidermal cells of bamboo culm, and in the epidermis, pith, and primary xylem of bamboo roots by in situ hybridization. The authors’ findings provide new insights and a possible aquaporin-led mechanism for bamboo fast growth.
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Affiliation(s)
- Huayu Sun
- State Forestry Administration Key Open Laboratory on the Science and Technology of Bamboo and Rattan, Institute of Gene Science for Bamboo and Rattan Resources, International Centre for Bamboo and Rattan, Beijing 100102, China.
- Department of Plant Science and Landscape Architecture, University of Connecticut, Storrs, CT 06269, USA.
| | - Sining Wang
- State Forestry Administration Key Open Laboratory on the Science and Technology of Bamboo and Rattan, Institute of Gene Science for Bamboo and Rattan Resources, International Centre for Bamboo and Rattan, Beijing 100102, China.
| | - Yongfeng Lou
- Jiangxi Academy of Forestry, Nanchang 330013, China.
| | - Chenglei Zhu
- State Forestry Administration Key Open Laboratory on the Science and Technology of Bamboo and Rattan, Institute of Gene Science for Bamboo and Rattan Resources, International Centre for Bamboo and Rattan, Beijing 100102, China.
| | - Hansheng Zhao
- State Forestry Administration Key Open Laboratory on the Science and Technology of Bamboo and Rattan, Institute of Gene Science for Bamboo and Rattan Resources, International Centre for Bamboo and Rattan, Beijing 100102, China.
| | - Ying Li
- State Forestry Administration Key Open Laboratory on the Science and Technology of Bamboo and Rattan, Institute of Gene Science for Bamboo and Rattan Resources, International Centre for Bamboo and Rattan, Beijing 100102, China.
| | - Xueping Li
- State Forestry Administration Key Open Laboratory on the Science and Technology of Bamboo and Rattan, Institute of Gene Science for Bamboo and Rattan Resources, International Centre for Bamboo and Rattan, Beijing 100102, China.
| | - Zhimin Gao
- State Forestry Administration Key Open Laboratory on the Science and Technology of Bamboo and Rattan, Institute of Gene Science for Bamboo and Rattan Resources, International Centre for Bamboo and Rattan, Beijing 100102, China.
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82
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Madrid-Espinoza J, Brunel-Saldias N, Guerra FP, Gutiérrez A, Del Pozo A. Genome-Wide Identification and Transcriptional Regulation of Aquaporin Genes in Bread Wheat ( Triticum aestivum L.) under Water Stress. Genes (Basel) 2018; 9:genes9100497. [PMID: 30326657 PMCID: PMC6210132 DOI: 10.3390/genes9100497] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/08/2018] [Revised: 10/09/2018] [Accepted: 10/09/2018] [Indexed: 01/04/2023] Open
Abstract
Aquaporins (AQPs) are transmembrane proteins essential for controlling the flow of water and other molecules required for development and stress tolerance in plants, including important crop species such as wheat (Triticum aestivum). In this study, we utilized a genomic approach for analyzing the information about AQPs available in public databases to characterize their structure and function. Furthermore, we validated the expression of a suite of AQP genes, at the transcriptional level, including accessions with contrasting responses to drought, different organs and water stress levels. We found 65 new AQP genes, from which 60% are copies expanded by polyploidization. Sequence analysis of the AQP genes showed that the purifying selection pressure acted on duplicate genes, which was related to a high conservation of the functions. This situation contrasted with the expression patterns observed for different organs, developmental stages or genotypes under water deficit conditions, which indicated functional divergence at transcription. Expression analyses on contrasting genotypes showed high gene transcription from Tonoplast Intrinsic Protein 1 (TIP1) and 2 (TIP2), and Plasma Membrane Intrinsic Protein 1 (PIP1) and 2 (PIP2) subfamilies in roots and from TIP1 and PIP1 subfamilies in leaves. Interestingly, during severe drought stress, 4 TIP genes analyzed in leaves of the tolerant accession reached up to 15-fold the level observed at the susceptible genotype, suggesting a positive relationship with drought tolerance. The obtained results extend our understanding of the structure and function of AQPs, particularly under water stress conditions.
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Affiliation(s)
- José Madrid-Espinoza
- Laboratorio de Genómica Funcional, Instituto de Ciencias Biológicas, Universidad de Talca, Talca 3460000, Chile.
| | - Nidia Brunel-Saldias
- Centro de Mejoramiento Genético y Fenómica Vegetal, Facultad de Ciencias Agrarias, Universidad de Talca, Talca 3460000, Chile.
- PIEI Adaptación de la Agricultura al Cambio Climático (A2C2), Universidad de Talca, Talca 3460000, Chile.
| | - Fernando P Guerra
- Laboratorio de Genética y Biotecnología Forestal, Instituto de Ciencias Biológicas, Universidad de Talca, Talca 3460000, Chile.
| | - Adelina Gutiérrez
- Laboratorio de Genética y Biotecnología Forestal, Instituto de Ciencias Biológicas, Universidad de Talca, Talca 3460000, Chile.
| | - Alejandro Del Pozo
- Centro de Mejoramiento Genético y Fenómica Vegetal, Facultad de Ciencias Agrarias, Universidad de Talca, Talca 3460000, Chile.
- PIEI Adaptación de la Agricultura al Cambio Climático (A2C2), Universidad de Talca, Talca 3460000, Chile.
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Yan X, Qian C, Yin X, Fan X, Zhao X, Gu M, Wang T, Ma XF. A whole-transcriptome approach to evaluate reference genes for quantitative diurnal gene expression studies under natural field conditions in Tamarix ramosissima leaves. ELECTRON J BIOTECHN 2018. [DOI: 10.1016/j.ejbt.2018.08.004] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022] Open
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84
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Ding L, Lu Z, Gao L, Guo S, Shen Q. Is Nitrogen a Key Determinant of Water Transport and Photosynthesis in Higher Plants Upon Drought Stress? FRONTIERS IN PLANT SCIENCE 2018; 9:1143. [PMID: 30186291 PMCID: PMC6113670 DOI: 10.3389/fpls.2018.01143] [Citation(s) in RCA: 52] [Impact Index Per Article: 8.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/08/2018] [Accepted: 07/17/2018] [Indexed: 05/19/2023]
Abstract
Drought stress is a major global issue limiting agricultural productivity. Plants respond to drought stress through a series of physiological, cellular, and molecular changes for survival. The regulation of water transport and photosynthesis play crucial roles in improving plants' drought tolerance. Nitrogen (N, ammonium and nitrate) is an essential macronutrient for plants, and it can affect many aspects of plant growth and metabolic pathways, including water relations and photosynthesis. This review focuses on how drought stress affects water transport and photosynthesis, including the regulation of hydraulic conductance, aquaporin expression, and photosynthesis. It also discusses the cross talk between N, water transport, and drought stress in higher plants.
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Affiliation(s)
- Lei Ding
- Jiangsu Provincial Key Lab for Organic Solid Waste Utilization, National Engineering Research Center for Organic-based Fertilizers, Jiangsu Collaborative Innovation Center for Solid Organic Waste Resource Utilization, Nanjing Agricultural University, Nanjing, China
- Louvain Institute of Biomolecular Science and Technology, Université catholique de Louvain, Louvain-la-Neuve, Belgium
| | - Zhifeng Lu
- Jiangsu Provincial Key Lab for Organic Solid Waste Utilization, National Engineering Research Center for Organic-based Fertilizers, Jiangsu Collaborative Innovation Center for Solid Organic Waste Resource Utilization, Nanjing Agricultural University, Nanjing, China
| | - Limin Gao
- Jiangsu Provincial Key Lab for Organic Solid Waste Utilization, National Engineering Research Center for Organic-based Fertilizers, Jiangsu Collaborative Innovation Center for Solid Organic Waste Resource Utilization, Nanjing Agricultural University, Nanjing, China
| | - Shiwei Guo
- Jiangsu Provincial Key Lab for Organic Solid Waste Utilization, National Engineering Research Center for Organic-based Fertilizers, Jiangsu Collaborative Innovation Center for Solid Organic Waste Resource Utilization, Nanjing Agricultural University, Nanjing, China
| | - Qirong Shen
- Jiangsu Provincial Key Lab for Organic Solid Waste Utilization, National Engineering Research Center for Organic-based Fertilizers, Jiangsu Collaborative Innovation Center for Solid Organic Waste Resource Utilization, Nanjing Agricultural University, Nanjing, China
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85
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Cooperativity in Plant Plasma Membrane Intrinsic Proteins (PIPs): Mechanism of Increased Water Transport in Maize PIP1 Channels in Hetero-tetramers. Sci Rep 2018; 8:12055. [PMID: 30104609 PMCID: PMC6089885 DOI: 10.1038/s41598-018-30257-4] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/19/2018] [Accepted: 07/10/2018] [Indexed: 11/08/2022] Open
Abstract
Plant aquaporins (AQPs) play vital roles in several physiological processes. Plasma membrane intrinsic proteins (PIPs) belong to the subfamily of plant AQPs. They are further subdivided into two closely related subgroups PIP1s and PIP2s. While PIP2 members are efficient water channels, PIP1s from some plant species have been shown to be functionally inactive. Aquaporins form tetramers under physiological conditions. PIP2s can enhance the water transport of PIP1s when they form hetero-tetramers. However, the role of monomer-monomer interface and the significance of specific residues in enhancing the water permeation of PIP1s have not been investigated at atomic level. We have performed all-atom molecular dynamics (MD) simulations of homo-tetramers and four different hetero-tetramers containing ZmPIP1;2 and ZmPIP2;5 from Zea mays. ZmPIP1;2 in a tetramer assembly will have two interfaces, one formed by transmembrane segments TM4 and TM5 and the other formed by TM1 and TM2. We have analyzed channel radius profiles, water transport and potential of mean force profiles of ZmPIP1;2 monomers. Results of MD simulations clearly revealed the influence of TM4-TM5 interface in modulating the water transport of ZmPIP1;2. MD simulations indicate the importance of I93 residue from the TM2 segment of ZmPIP2;5 for the increased water transport in ZmPIP1;2.
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86
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Vajpai M, Mukherjee M, Sankararamakrishnan R. Cooperativity in Plant Plasma Membrane Intrinsic Proteins (PIPs): Mechanism of Increased Water Transport in Maize PIP1 Channels in Hetero-tetramers. Sci Rep 2018; 8:12055. [PMID: 30104609 DOI: 10.1101/239780] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/19/2018] [Accepted: 07/10/2018] [Indexed: 05/26/2023] Open
Abstract
Plant aquaporins (AQPs) play vital roles in several physiological processes. Plasma membrane intrinsic proteins (PIPs) belong to the subfamily of plant AQPs. They are further subdivided into two closely related subgroups PIP1s and PIP2s. While PIP2 members are efficient water channels, PIP1s from some plant species have been shown to be functionally inactive. Aquaporins form tetramers under physiological conditions. PIP2s can enhance the water transport of PIP1s when they form hetero-tetramers. However, the role of monomer-monomer interface and the significance of specific residues in enhancing the water permeation of PIP1s have not been investigated at atomic level. We have performed all-atom molecular dynamics (MD) simulations of homo-tetramers and four different hetero-tetramers containing ZmPIP1;2 and ZmPIP2;5 from Zea mays. ZmPIP1;2 in a tetramer assembly will have two interfaces, one formed by transmembrane segments TM4 and TM5 and the other formed by TM1 and TM2. We have analyzed channel radius profiles, water transport and potential of mean force profiles of ZmPIP1;2 monomers. Results of MD simulations clearly revealed the influence of TM4-TM5 interface in modulating the water transport of ZmPIP1;2. MD simulations indicate the importance of I93 residue from the TM2 segment of ZmPIP2;5 for the increased water transport in ZmPIP1;2.
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Affiliation(s)
- Manu Vajpai
- Department of Biological Sciences and Bioengineering, Indian Institute of Technology Kanpur, Kanpur, 208016, India
| | - Mishtu Mukherjee
- Department of Biological Sciences and Bioengineering, Indian Institute of Technology Kanpur, Kanpur, 208016, India
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87
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Song S, Xu Y, Huang D, Miao H, Liu J, Jia C, Hu W, Valarezo AV, Xu B, Jin Z. Identification of a novel promoter from banana aquaporin family gene (MaTIP1;2) which responses to drought and salt-stress in transgenic Arabidopsis thaliana. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2018; 128:163-169. [PMID: 29778840 DOI: 10.1016/j.plaphy.2018.05.003] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/27/2018] [Revised: 04/28/2018] [Accepted: 05/02/2018] [Indexed: 06/08/2023]
Abstract
Drought and salt stresses often affect plant growth and crop yields. Identification of promoters involved in drought and salt stress responses is of great significance for genetic improvement of crop resistance. Our previous studies showed that aquaporin can respond to drought and salt stresses, but its promoter has not yet been reported in plants. In the present study, cis-acting elements of MaAQP family member promoters were systematically analyzed in banana. Expression of MaTIP1; 2 was induced by drought and salt stresses but not sensitive to cold stress, waterlogging stress, or mechanical damage, and its promoter contained five stress-related cis-acting elements. The MaTIP1; 2 promoter (841 bp upstream of translation initiation site) from banana (Musa acuminata L. AAA group cv. Brazilian) was isolated through genome walking polymerase chain reaction, and found to contain a TATA Box, CAAT box, ABRE element, CCGTCC box, CGTCA motif, and TCA element. Transformation of the MaTIP1; 2 promoter into Arabidopsis to assess its function indicated that it responds to both drought and salt stress treatments. These results suggest that MaTIP1; 2 utilization may improve drought and salt stresses resistance of the transgenic plants by promoting banana aquaporin expression.
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Affiliation(s)
- Shun Song
- Key Laboratory of Genetic Improvement of Bananas, Hainan Province, Haikou Experimental Station, Chinese Academy of Tropical Agricultural Sciences, Haikou, China; National Key Laboratory of Crop Genetic Improvement, National Centre of Plant Gene Research(Wuhan), Huazhong Agricultural University, Wuhan, China
| | - Yi Xu
- Key Laboratory of Genetic Improvement of Bananas, Hainan Province, Haikou Experimental Station, Chinese Academy of Tropical Agricultural Sciences, Haikou, China
| | - Dongmei Huang
- Key Laboratory of Genetic Improvement of Bananas, Hainan Province, Haikou Experimental Station, Chinese Academy of Tropical Agricultural Sciences, Haikou, China
| | - Hongxia Miao
- Key Laboratory of Tropical Crop Biotechnology, Ministry of Agriculture, Institute of Tropical Bioscience and Biotechnology, Chinese Academy of Tropical Agricultural Sciences, Haikou, China
| | - Juhua Liu
- Key Laboratory of Tropical Crop Biotechnology, Ministry of Agriculture, Institute of Tropical Bioscience and Biotechnology, Chinese Academy of Tropical Agricultural Sciences, Haikou, China
| | - Caihong Jia
- Key Laboratory of Tropical Crop Biotechnology, Ministry of Agriculture, Institute of Tropical Bioscience and Biotechnology, Chinese Academy of Tropical Agricultural Sciences, Haikou, China
| | - Wei Hu
- Key Laboratory of Tropical Crop Biotechnology, Ministry of Agriculture, Institute of Tropical Bioscience and Biotechnology, Chinese Academy of Tropical Agricultural Sciences, Haikou, China
| | - Ana Valeria Valarezo
- Key Laboratory of Genetic Improvement of Bananas, Hainan Province, Haikou Experimental Station, Chinese Academy of Tropical Agricultural Sciences, Haikou, China
| | - Biyu Xu
- Key Laboratory of Tropical Crop Biotechnology, Ministry of Agriculture, Institute of Tropical Bioscience and Biotechnology, Chinese Academy of Tropical Agricultural Sciences, Haikou, China.
| | - Zhiqiang Jin
- Key Laboratory of Genetic Improvement of Bananas, Hainan Province, Haikou Experimental Station, Chinese Academy of Tropical Agricultural Sciences, Haikou, China.
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88
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Zhou L, Zhou J, Xiong Y, Liu C, Wang J, Wang G, Cai Y. Overexpression of a maize plasma membrane intrinsic protein ZmPIP1;1 confers drought and salt tolerance in Arabidopsis. PLoS One 2018; 13:e0198639. [PMID: 29856862 PMCID: PMC5983466 DOI: 10.1371/journal.pone.0198639] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/08/2018] [Accepted: 05/22/2018] [Indexed: 11/25/2022] Open
Abstract
Drought and salt stress are major abiotic stress that inhibit plants growth and development, here we report a plasma membrane intrinsic protein ZmPIP1;1 from maize and identified its function in drought and salt tolerance in Arabidopsis. ZmPIP1;1 was localized to the plasma membrane and endoplasmic reticulum in maize protoplasts. Treatment with PEG or NaCl resulted in induced expression of ZmPIP1;1 in root and leaves. Constitutive overexpression of ZmPIP1;1 in transgenic Arabidopsis plants resulted in enhanced drought and salt stress tolerance compared to wild type. A number of stress responsive genes involved in cellular osmoprotection in ZmPIP1;1 overexpression plants were up-regulated under drought or salt condition. ZmPIP1;1 overexpression plants showed higher activities of reactive oxygen species (ROS) scavenging enzymes such as catalase and superoxide dismutase, lower contents of stress-induced ROS such as superoxide, hydrogen peroxide and malondialdehyde, and higher levels of proline under drought and salt stress than did wild type. ZmPIP1;1 may play a role in drought and salt stress tolerance by inducing of stress responsive genes and increasing of ROS scavenging enzymes activities, and could provide a valuable gene for further plant breeding.
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Affiliation(s)
- Lian Zhou
- Maize Research Institute, Key Laboratory of Biotechnology and Crop Quality Improvement, College of Agronomy and Biotechnology, Southwest University, Chongqing, China
| | - Jing Zhou
- Maize Research Institute, Key Laboratory of Biotechnology and Crop Quality Improvement, College of Agronomy and Biotechnology, Southwest University, Chongqing, China
| | - Yuhan Xiong
- Maize Research Institute, Key Laboratory of Biotechnology and Crop Quality Improvement, College of Agronomy and Biotechnology, Southwest University, Chongqing, China
| | - Chaoxian Liu
- Maize Research Institute, Key Laboratory of Biotechnology and Crop Quality Improvement, College of Agronomy and Biotechnology, Southwest University, Chongqing, China
| | - Jiuguang Wang
- Maize Research Institute, Key Laboratory of Biotechnology and Crop Quality Improvement, College of Agronomy and Biotechnology, Southwest University, Chongqing, China
| | - Guoqiang Wang
- Maize Research Institute, Key Laboratory of Biotechnology and Crop Quality Improvement, College of Agronomy and Biotechnology, Southwest University, Chongqing, China
| | - Yilin Cai
- Maize Research Institute, Key Laboratory of Biotechnology and Crop Quality Improvement, College of Agronomy and Biotechnology, Southwest University, Chongqing, China
- * E-mail:
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89
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SkZ A, Vardharajula S, Vurukonda SSKP. Transcriptomic profiling of maize (Zea mays L.) seedlings in response to Pseudomonas putida stain FBKV2 inoculation under drought stress. ANN MICROBIOL 2018. [DOI: 10.1007/s13213-018-1341-3] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022] Open
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90
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Wong DCJ, Zhang L, Merlin I, Castellarin SD, Gambetta GA. Structure and transcriptional regulation of the major intrinsic protein gene family in grapevine. BMC Genomics 2018; 19:248. [PMID: 29642857 PMCID: PMC5896048 DOI: 10.1186/s12864-018-4638-5] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/29/2018] [Accepted: 03/29/2018] [Indexed: 12/05/2022] Open
Abstract
Background The major intrinsic protein (MIP) family is a family of proteins, including aquaporins, which facilitate water and small molecule transport across plasma membranes. In plants, MIPs function in a huge variety of processes including water transport, growth, stress response, and fruit development. In this study, we characterize the structure and transcriptional regulation of the MIP family in grapevine, describing the putative genome duplication events leading to the family structure and characterizing the family’s tissue and developmental specific expression patterns across numerous preexisting microarray and RNAseq datasets. Gene co-expression network (GCN) analyses were carried out across these datasets and the promoters of each family member were analyzed for cis-regulatory element structure in order to provide insight into their transcriptional regulation. Results A total of 29 Vitis vinifera MIP family members (excluding putative pseudogenes) were identified of which all but two were mapped onto Vitis vinifera chromosomes. In this study, segmental duplication events were identified for five plasma membrane intrinsic protein (PIP) and four tonoplast intrinsic protein (TIP) genes, contributing to the expansion of PIPs and TIPs in grapevine. Grapevine MIP family members have distinct tissue and developmental expression patterns and hierarchical clustering revealed two primary groups regardless of the datasets analyzed. Composite microarray and RNA-seq gene co-expression networks (GCNs) highlighted the relationships between MIP genes and functional categories involved in cell wall modification and transport, as well as with other MIPs revealing a strong co-regulation within the family itself. Some duplicated MIP family members have undergone sub-functionalization and exhibit distinct expression patterns and GCNs. Cis-regulatory element (CRE) analyses of the MIP promoters and their associated GCN members revealed enrichment for numerous CREs including AP2/ERFs and NACs. Conclusions Combining phylogenetic analyses, gene expression profiling, gene co-expression network analyses, and cis-regulatory element enrichment, this study provides a comprehensive overview of the structure and transcriptional regulation of the grapevine MIP family. The study highlights the duplication and sub-functionalization of the family, its strong coordinated expression with genes involved in growth and transport, and the putative classes of TFs responsible for its regulation. Electronic supplementary material The online version of this article (10.1186/s12864-018-4638-5) contains supplementary material, which is available to authorized users.
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Affiliation(s)
- Darren Chern Jan Wong
- Wine Research Centre, University of British Columbia, 2205 East Mall, Vancouver, BC, V6T 0Z4, Canada
| | - Li Zhang
- Bordeaux Science Agro, Institut des Sciences de la Vigne et du Vin, Ecophysiologie et Génomique Fonctionnelle de la Vigne, UMR 1287, F- 33140, Villenave d'Ornon, France
| | - Isabelle Merlin
- Bordeaux Science Agro, Institut des Sciences de la Vigne et du Vin, Ecophysiologie et Génomique Fonctionnelle de la Vigne, UMR 1287, F- 33140, Villenave d'Ornon, France
| | - Simone D Castellarin
- Wine Research Centre, University of British Columbia, 2205 East Mall, Vancouver, BC, V6T 0Z4, Canada
| | - Gregory A Gambetta
- Bordeaux Science Agro, Institut des Sciences de la Vigne et du Vin, Ecophysiologie et Génomique Fonctionnelle de la Vigne, UMR 1287, F- 33140, Villenave d'Ornon, France.
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91
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Feng ZJ, Xu SC, Liu N, Zhang GW, Hu QZ, Xu ZS, Gong YM. Identification of the AQP members involved in abiotic stress responses from Arabidopsis. Gene 2018; 646:64-73. [DOI: 10.1016/j.gene.2017.12.048] [Citation(s) in RCA: 29] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2017] [Accepted: 12/22/2017] [Indexed: 11/26/2022]
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92
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Laloux T, Junqueira B, Maistriaux LC, Ahmed J, Jurkiewicz A, Chaumont F. Plant and Mammal Aquaporins: Same but Different. Int J Mol Sci 2018; 19:E521. [PMID: 29419811 PMCID: PMC5855743 DOI: 10.3390/ijms19020521] [Citation(s) in RCA: 43] [Impact Index Per Article: 7.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/17/2018] [Revised: 01/31/2018] [Accepted: 02/01/2018] [Indexed: 02/06/2023] Open
Abstract
Aquaporins (AQPs) constitute an ancient and diverse protein family present in all living organisms, indicating a common ancient ancestor. However, during evolution, these organisms appear and evolve differently, leading to different cell organizations and physiological processes. Amongst the eukaryotes, an important distinction between plants and animals is evident, the most conspicuous difference being that plants are sessile organisms facing ever-changing environmental conditions. In addition, plants are mostly autotrophic, being able to synthesize carbohydrates molecules from the carbon dioxide in the air during the process of photosynthesis, using sunlight as an energy source. It is therefore interesting to analyze how, in these different contexts specific to both kingdoms of life, AQP function and regulation evolved. This review aims at highlighting similarities and differences between plant and mammal AQPs. Emphasis is given to the comparison of isoform numbers, their substrate selectivity, the regulation of the subcellular localization, and the channel activity.
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Affiliation(s)
- Timothée Laloux
- Institut des Sciences de la Vie, Université catholique de Louvain, Croix du Sud 4-L7.07.14, B-1348 Louvain-la Neuve, Belgium.
| | - Bruna Junqueira
- Institut des Sciences de la Vie, Université catholique de Louvain, Croix du Sud 4-L7.07.14, B-1348 Louvain-la Neuve, Belgium.
| | - Laurie C Maistriaux
- Institut des Sciences de la Vie, Université catholique de Louvain, Croix du Sud 4-L7.07.14, B-1348 Louvain-la Neuve, Belgium.
| | - Jahed Ahmed
- Institut des Sciences de la Vie, Université catholique de Louvain, Croix du Sud 4-L7.07.14, B-1348 Louvain-la Neuve, Belgium.
| | - Agnieszka Jurkiewicz
- Institut des Sciences de la Vie, Université catholique de Louvain, Croix du Sud 4-L7.07.14, B-1348 Louvain-la Neuve, Belgium.
| | - François Chaumont
- Institut des Sciences de la Vie, Université catholique de Louvain, Croix du Sud 4-L7.07.14, B-1348 Louvain-la Neuve, Belgium.
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93
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Bienert MD, Diehn TA, Richet N, Chaumont F, Bienert GP. Heterotetramerization of Plant PIP1 and PIP2 Aquaporins Is an Evolutionary Ancient Feature to Guide PIP1 Plasma Membrane Localization and Function. FRONTIERS IN PLANT SCIENCE 2018; 9:382. [PMID: 29632543 PMCID: PMC5879115 DOI: 10.3389/fpls.2018.00382] [Citation(s) in RCA: 39] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/16/2017] [Accepted: 03/08/2018] [Indexed: 05/21/2023]
Abstract
Aquaporins (AQPs) are tetrameric channel proteins regulating the transmembrane flux of small uncharged solutes and in particular water in living organisms. In plants, members of the plasma membrane intrinsic protein (PIP) AQP subfamily are important for the maintenance of the plant water status through the control of cell and tissue hydraulics. The PIP subfamily is subdivided into two groups: PIP1 and PIP2 that exhibit different water-channel activities when expressed in Xenopus oocytes or yeast cells. Most PIP1 and PIP2 isoforms physically interact and assemble in heterotetramers to modulate their subcellular localization and channel activity when they are co-expressed in oocytes, yeasts, and plants. Whether the interaction between different PIPs is stochastic or controlled by cell regulatory processes is still unknown. Here, we analyzed the water transport activity and the subcellular localization behavior of the complete PIP subfamily (SmPIP1;1, SmPIP2;1, and SmPIP2;2) of the lycophyte Selaginella moellendorffii upon (co-)expression in yeast and Xenopus oocytes. As observed for most of the PIP1 and PIP2 isoforms in other species, SmPIP1;1 was retained in the ER while SmPIP2;1 was found in the plasma membrane but, upon co-expression, both isoforms were found in the plasma membrane, leading to a synergistic effect on the water membrane permeability. SmPIP2;2 behaves as a PIP1, being retained in the endoplasmic reticulum when expressed alone in oocytes or in yeasts. Interestingly, in contrast to the oocyte system, in yeasts no synergistic effect on the membrane permeability was observed upon SmPIP1;1/SmPIP2;1 co-expression. We also demonstrated that SmPIP2;1 is permeable to water and the signaling molecule hydrogen peroxide. Moreover, growth- and complementation assays in the yeast system showed that heteromerization in all possible SmPIP combinations did not modify the substrate specificity of the channels. These results suggest that the characteristics known for angiosperm PIP1 and PIP2 isoforms in terms of their water transport activity, trafficking, and interaction emerged already as early as in non-seed vascular plants. The existence and conservation of these characteristics may argue for the fact that PIP2s are indeed involved in the delivery of PIP1s to the plasma membrane and that the formation of functional heterotetramers is of biological relevance.
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Affiliation(s)
- Manuela D. Bienert
- Metalloid Transport Group, Department of Physiology and Cell Biology, Leibniz Institute of Plant Genetics and Crop Plant Research, Gatersleben, Germany
| | - Till A. Diehn
- Metalloid Transport Group, Department of Physiology and Cell Biology, Leibniz Institute of Plant Genetics and Crop Plant Research, Gatersleben, Germany
| | - Nicolas Richet
- Institut des Sciences de la Vie, Université catholique de Louvain, Louvain-la-Neuve, Belgium
| | - François Chaumont
- Institut des Sciences de la Vie, Université catholique de Louvain, Louvain-la-Neuve, Belgium
| | - Gerd P. Bienert
- Metalloid Transport Group, Department of Physiology and Cell Biology, Leibniz Institute of Plant Genetics and Crop Plant Research, Gatersleben, Germany
- *Correspondence: Gerd P. Bienert,
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94
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He WD, Gao J, Dou TX, Shao XH, Bi FC, Sheng O, Deng GM, Li CY, Hu CH, Liu JH, Zhang S, Yang QS, Yi GJ. Early Cold-Induced Peroxidases and Aquaporins Are Associated With High Cold Tolerance in Dajiao ( Musa spp. 'Dajiao'). FRONTIERS IN PLANT SCIENCE 2018; 9:282. [PMID: 29568304 PMCID: PMC5852111 DOI: 10.3389/fpls.2018.00282] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/27/2017] [Accepted: 02/19/2018] [Indexed: 05/20/2023]
Abstract
Banana is an important tropical fruit with high economic value. One of the main cultivars ('Cavendish') is susceptible to low temperatures, while another closely related specie ('Dajiao') has considerably higher cold tolerance. We previously reported that some membrane proteins appear to be involved in the cold tolerance of Dajiao bananas via an antioxidation mechanism. To investigate the early cold stress response of Dajiao, here we applied comparative membrane proteomics analysis for both cold-sensitive Cavendish and cold-tolerant Dajiao bananas subjected to cold stress at 10°C for 0, 3, and 6 h. A total of 2,333 and 1,834 proteins were identified in Cavendish and Dajiao, respectively. Subsequent bioinformatics analyses showed that 692 Cavendish proteins and 524 Dajiao proteins were predicted to be membrane proteins, of which 82 and 137 differentially abundant membrane proteins (DAMPs) were found in Cavendish and Dajiao, respectively. Interestingly, the number of DAMPs with increased abundance following 3 h of cold treatment in Dajiao (80) was seven times more than that in Cavendish (11). Gene ontology molecular function analysis of DAMPs for Cavendish and Dajiao indicated that they belong to eight categories including hydrolase activity, binding, transporter activity, antioxidant activity, etc., but the number in Dajiao is twice that in Cavendish. Strikingly, we found peroxidases (PODs) and aquaporins among the protein groups whose abundance was significantly increased after 3 h of cold treatment in Dajiao. Some of the PODs and aquaporins were verified by reverse-transcription PCR, multiple reaction monitoring, and green fluorescent protein-based subcellular localization analysis, demonstrating that the global membrane proteomics data are reliable. By combining the physiological and biochemical data, we found that membrane-bound Peroxidase 52 and Peroxidase P7, and aquaporins (MaPIP1;1, MaPIP1;2, MaPIP2;4, MaPIP2;6, MaTIP1;3) are mainly involved in decreased lipid peroxidation and maintaining leaf cell water potential, which appear to be the key cellular adaptations contributing to the cold tolerance of Dajiao. This membrane proteomics study provides new insights into cold stress tolerance mechanisms of banana, toward potential applications for ultimate genetic improvement of cold tolerance in banana.
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Affiliation(s)
- Wei-Di He
- Key Laboratory of Horticultural Plant Biology of the Ministry of Education, College of Horticulture and Forestry Sciences, Huazhong Agricultural University, Wuhan, China
- Key Laboratory of South Subtropical Fruit Biology and Genetic Resource Utilization of the Ministry of Agriculture/Guangdong Key Laboratory of Tropical and Subtropical Fruit Tree Research, Institute of Fruit Tree Research, Guangdong Academy of Agricultural Sciences, Guangzhou, China
| | - Jie Gao
- Institute of Environmental Horticulture Research, Guangdong Academy of Agricultural Sciences, Guangzhou, China
| | - Tong-Xin Dou
- Key Laboratory of South Subtropical Fruit Biology and Genetic Resource Utilization of the Ministry of Agriculture/Guangdong Key Laboratory of Tropical and Subtropical Fruit Tree Research, Institute of Fruit Tree Research, Guangdong Academy of Agricultural Sciences, Guangzhou, China
| | - Xiu-Hong Shao
- Key Laboratory of South Subtropical Fruit Biology and Genetic Resource Utilization of the Ministry of Agriculture/Guangdong Key Laboratory of Tropical and Subtropical Fruit Tree Research, Institute of Fruit Tree Research, Guangdong Academy of Agricultural Sciences, Guangzhou, China
- College of Horticulture and Landscape, Hunan Agricultural University, Changsha, China
| | - Fang-Cheng Bi
- Key Laboratory of South Subtropical Fruit Biology and Genetic Resource Utilization of the Ministry of Agriculture/Guangdong Key Laboratory of Tropical and Subtropical Fruit Tree Research, Institute of Fruit Tree Research, Guangdong Academy of Agricultural Sciences, Guangzhou, China
| | - Ou Sheng
- Key Laboratory of South Subtropical Fruit Biology and Genetic Resource Utilization of the Ministry of Agriculture/Guangdong Key Laboratory of Tropical and Subtropical Fruit Tree Research, Institute of Fruit Tree Research, Guangdong Academy of Agricultural Sciences, Guangzhou, China
| | - Gui-Ming Deng
- Key Laboratory of South Subtropical Fruit Biology and Genetic Resource Utilization of the Ministry of Agriculture/Guangdong Key Laboratory of Tropical and Subtropical Fruit Tree Research, Institute of Fruit Tree Research, Guangdong Academy of Agricultural Sciences, Guangzhou, China
| | - Chun-Yu Li
- Key Laboratory of South Subtropical Fruit Biology and Genetic Resource Utilization of the Ministry of Agriculture/Guangdong Key Laboratory of Tropical and Subtropical Fruit Tree Research, Institute of Fruit Tree Research, Guangdong Academy of Agricultural Sciences, Guangzhou, China
| | - Chun-Hua Hu
- Key Laboratory of South Subtropical Fruit Biology and Genetic Resource Utilization of the Ministry of Agriculture/Guangdong Key Laboratory of Tropical and Subtropical Fruit Tree Research, Institute of Fruit Tree Research, Guangdong Academy of Agricultural Sciences, Guangzhou, China
| | - Ji-Hong Liu
- Key Laboratory of Horticultural Plant Biology of the Ministry of Education, College of Horticulture and Forestry Sciences, Huazhong Agricultural University, Wuhan, China
| | - Sheng Zhang
- Institute of Biotechnology, Cornell University, Ithaca, NY, United States
| | - Qiao-Song Yang
- Key Laboratory of South Subtropical Fruit Biology and Genetic Resource Utilization of the Ministry of Agriculture/Guangdong Key Laboratory of Tropical and Subtropical Fruit Tree Research, Institute of Fruit Tree Research, Guangdong Academy of Agricultural Sciences, Guangzhou, China
- *Correspondence: Gan-Jun Yi, Qiao-Song Yang,
| | - Gan-Jun Yi
- Key Laboratory of South Subtropical Fruit Biology and Genetic Resource Utilization of the Ministry of Agriculture/Guangdong Key Laboratory of Tropical and Subtropical Fruit Tree Research, Institute of Fruit Tree Research, Guangdong Academy of Agricultural Sciences, Guangzhou, China
- *Correspondence: Gan-Jun Yi, Qiao-Song Yang,
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95
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Are Aquaporins (AQPs) the Gateway that Conduits Nutrients, Persistent Organic Pollutants and Perfluoroalkyl Substances (PFASs) into Plants? ACTA ACUST UNITED AC 2017. [DOI: 10.1007/s40362-017-0045-6] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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96
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Reddy PS, Tharanya M, Sivasakthi K, Srikanth M, Hash CT, Kholova J, Sharma KK, Vadez V. Molecular cloning and expression analysis of Aquaporin genes in pearl millet [Pennisetum glaucum (L) R. Br.] genotypes contrasting in their transpiration response to high vapour pressure deficits. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2017; 265:167-176. [PMID: 29223338 DOI: 10.1016/j.plantsci.2017.10.005] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/09/2017] [Revised: 10/07/2017] [Accepted: 10/09/2017] [Indexed: 05/24/2023]
Abstract
Pearl millet is a crop of the semi-arid tropics having high degree of genetic diversity and variable tolerance to drought stress. To investigate drought tolerance mechanism that possibly accounts for differences in drought tolerance, four recombinant inbred lines from a high resolution cross (HRC) were selected for variability in their transpiration rate (Tr) response to vapour pressure deficit (VPD) conditions. The differential Tr response of the genotypes to increased VPD conditions was used to classify the genotypes as sensitive or insensitive to high VPD. Aquaporin (AQP) genes PgPIP1;1, PgPIP1;2, PgPIP2;1, PgPIP2;3, PgPIP2;6, PgTIP1;1 and PgTIP2;2 were cloned. Phylogenetic analysis revealed that the cloned PgAQPs were evolutionarily closer to maize AQPs than to rice. PgAQP genes, including PgPIP1;1 and PgPIP2;6 in root tissue showed a significant expression pattern with higher expression in VPD-insensitive genotypes than VPD-sensitive genotypes under low VPD conditions (1.2kPa) i.e when there is no high evaporative demand from the atmosphere. PgAQP genes (PgPIP2;1 in leaf and root tissues; PgPIP1;2 and PgTIP2;2 in leaf and PgPIP2;6 in root) followed a diurnal rhythm in leaves and roots that have either higher or lower expression levels at different time intervals. Under high VPD conditions (4.21kPa), PgPIP2;3 showed higher transcript abundance in VPD-insensitive genotypes, and PgPIP2;1 in VPD-sensitive genotypes, while rest of the PgAQPs showed differential expression. Our current hypothesis is that these differences in the expression of AQP genes under different VPDs suggests a role of the AQPs in tuning the water transport pathways with variation between genotypes.
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Affiliation(s)
- Palakolanu Sudhakar Reddy
- International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), Patancheru, Hyderabad 502 324, Telangana, India
| | - Murugesan Tharanya
- International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), Patancheru, Hyderabad 502 324, Telangana, India; Department of Industrial Biotechnology, Bharathidasan University, Tiruchirappalli, India
| | - Kaliamoorthy Sivasakthi
- International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), Patancheru, Hyderabad 502 324, Telangana, India; Department of Industrial Biotechnology, Bharathidasan University, Tiruchirappalli, India
| | - Mallayee Srikanth
- International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), Patancheru, Hyderabad 502 324, Telangana, India
| | - C Tom Hash
- International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), Patancheru, Hyderabad 502 324, Telangana, India
| | - Jana Kholova
- International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), Patancheru, Hyderabad 502 324, Telangana, India
| | - Kiran K Sharma
- International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), Patancheru, Hyderabad 502 324, Telangana, India
| | - Vincent Vadez
- International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), Patancheru, Hyderabad 502 324, Telangana, India.
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97
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Fox AR, Maistriaux LC, Chaumont F. Toward understanding of the high number of plant aquaporin isoforms and multiple regulation mechanisms. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2017; 264:179-187. [PMID: 28969798 DOI: 10.1016/j.plantsci.2017.07.021] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/02/2017] [Revised: 07/14/2017] [Accepted: 07/21/2017] [Indexed: 05/20/2023]
Abstract
Since the discovery of the first plant aquaporin (AQP) in 1993, our conception of the way plants control cell water homeostasis as well as their global water balance has been revisited. Plant AQPs constitute a large family of evolutionarily related channels that, in addition to water, can also facilitate the membrane diffusion of a number of small solutes, such as urea, CO2, H2O2, ammonia, metalloids, and even ions, indicating a wide range of cellular functions. At the cellular level, AQPs are subject to various regulation mechanisms leading to active/inactive channels in their target membranes. In this review, we discuss several specific questions that need to be addressed in future research. Why are so many different AQPs simultaneously expressed in specific cellular types? How is their selectivity to different solutes controlled (in particular in the case of multiple permeation properties)? What does the molecular interaction between AQPs and other molecules tell us about their regulation and their involvement in specific cellular and physiological processes? Resolving these questions will definitely help us better understand the physiological advantages that plants have to express and regulate so many AQP isoforms.
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Affiliation(s)
- Ana Romina Fox
- Institut des Sciences de la Vie, Université catholique de Louvain, Croix du Sud 4-L7.07.14, B-1348 Louvain-la-Neuve, Belgium
| | - Laurie C Maistriaux
- Institut des Sciences de la Vie, Université catholique de Louvain, Croix du Sud 4-L7.07.14, B-1348 Louvain-la-Neuve, Belgium
| | - François Chaumont
- Institut des Sciences de la Vie, Université catholique de Louvain, Croix du Sud 4-L7.07.14, B-1348 Louvain-la-Neuve, Belgium.
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98
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Prediction of arsenic and antimony transporter major intrinsic proteins from the genomes of crop plants. Int J Biol Macromol 2017; 107:2630-2642. [PMID: 29080824 DOI: 10.1016/j.ijbiomac.2017.10.153] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/28/2017] [Revised: 10/24/2017] [Accepted: 10/24/2017] [Indexed: 01/17/2023]
Abstract
Major intrinsic proteins (MIPs), commonly known as aquaporins, transport water and non-polar small solutes. Comparing the 3D models and the primary selectivity-related motifs (two Asn-Pro-Ala (NPA) regions, the aromatic/arginine (ar/R) selectivity filter, and Froger's positions (FPs)) of all plant MIPs that have been experimentally proven to transport arsenic (As) and antimony (Sb), some substrate-specific signature sequences (SSSS) or specificity determining sites (SDPs) have been predicted. These SSSS or SDPs were determined in 543 MIPs found in the genomes of 12 crop plants; the As and Sb transporters were predicted to be distributed in noduline-26 like intrinsic proteins (NIPs), and every plant had one or several As and Sb transporter NIPs. Phylogenetic grouping of the NIP subfamily based on the ar/R selectivity filter and FPs were linked to As and Sb transport. We further determined the group-wise substrate selectivity profiles of the NIPs in the 12 crop plants. In addition to two NPA regions, the ar/R filter, and FPs, certain amino acids especially in the pore line, loop D, and termini contribute to the functional distinctiveness of the NIP groups. Expression analysis of transcripts in different organs indicated that most of the As and Sb transporter NIPs were expressed in roots.
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99
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Zhang D, Huang Y, Kumar M, Wan Q, Xu Z, Shao H, Pandey GK. Heterologous expression of GmSIP1;3 from soybean in tobacco showed and growth retardation and tolerance to hydrogen peroxide. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2017; 263:210-218. [PMID: 28818377 DOI: 10.1016/j.plantsci.2017.07.018] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/23/2017] [Revised: 07/17/2017] [Accepted: 07/24/2017] [Indexed: 06/07/2023]
Abstract
Aquaporins (AQPs) are transmembrane protein channels that are members of Major Intrinsic Proteins (MIP) superfamily. AQPs play important roles in plant reproduction, cell elongation, osmoregulation, influence leaf physiology and are responsive to drought and salt tolerance. Small intrinsic proteins (SIPs)belongs to one of the groups of AQPs, which are mainly localized to endoplasmic reticulum(ER). While this group of aquaporin is being well studied in Arabidopsis, grape and other plant species, not much is known about the molecular regulatory mechanisms driven by ER-type AQPs in Glycine Max. In this study, the function of GmSIP1;3 is studied in detail by using both yeast and plant systems. GmSIP1;3 showed a ubiquitous expression pattern in all different tissues in Glycine Max. Heterologous expression of GmSIP1;3 in Nicotiana tabacum conferred a short root phenotype,growth retardation at seedling stage and significant tolerance to oxidative stress (H2O2) both in yeast and plant systems. Auxin (IAA) content significantly increased in transgenic plants compared with that of wild type, however, the abscisic acid (ABA) content was significantly reduced. Subcellular localization and colocalization analyses showed GmSIP1;3 localized to ER plasma membrane. On the basis of these observations, we postulate that GmSIP1;3 is involved in oxidative stress pathways.
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Affiliation(s)
- Dayong Zhang
- Salt-Soil Agricultural Center, Institute of Agricultural Resources and Environment Jiangsu Academy of Agricultural Sciences, Zhongling Street No.50, Nanjing 210014, China.
| | - Yihong Huang
- Salt-Soil Agricultural Center, Institute of Agricultural Resources and Environment Jiangsu Academy of Agricultural Sciences, Zhongling Street No.50, Nanjing 210014, China
| | - Manoj Kumar
- Department of Plant Molecular Biology, University of Delhi South Campus, Benito Juarez Road, Dhaula Kuan, New Delhi 110021, India
| | - Qun Wan
- Salt-Soil Agricultural Center, Institute of Agricultural Resources and Environment Jiangsu Academy of Agricultural Sciences, Zhongling Street No.50, Nanjing 210014, China
| | - Zhaolong Xu
- Salt-Soil Agricultural Center, Institute of Agricultural Resources and Environment Jiangsu Academy of Agricultural Sciences, Zhongling Street No.50, Nanjing 210014, China
| | - Hongbo Shao
- Salt-Soil Agricultural Center, Institute of Agricultural Resources and Environment Jiangsu Academy of Agricultural Sciences, Zhongling Street No.50, Nanjing 210014, China; Jiangsu Key Laboratory for Bioresources of Saline Soils, Jiangsu Synthetic Innovation Center for Coastal Bio-Agriculture, Yancheng Teachers University, Yancheng City, 224002, China.
| | - Girdhar K Pandey
- Department of Plant Molecular Biology, University of Delhi South Campus, Benito Juarez Road, Dhaula Kuan, New Delhi 110021, India.
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100
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Kong W, Yang S, Wang Y, Bendahmane M, Fu X. Genome-wide identification and characterization of aquaporin gene family in Beta vulgaris. PeerJ 2017; 5:e3747. [PMID: 28948097 PMCID: PMC5609522 DOI: 10.7717/peerj.3747] [Citation(s) in RCA: 32] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/13/2017] [Accepted: 08/08/2017] [Indexed: 01/09/2023] Open
Abstract
Aquaporins (AQPs) are essential channel proteins that execute multi-functions throughout plant growth and development, including water transport, uncharged solutes uptake, stress response, and so on. Here, we report the first genome-wide identification and characterization AQP (BvAQP) genes in sugar beet (Beta vulgaris), an important crop widely cultivated for feed, for sugar production and for bioethanol production. Twenty-eight sugar beet AQPs (BvAQPs) were identified and assigned into five subfamilies based on phylogenetic analyses: seven of plasma membrane (PIPs), eight of tonoplast (TIPs), nine of NOD26-like (NIPs), three of small basic (SIPs), and one of x-intrinsic proteins (XIPs). BvAQP genes unevenly mapped on all chromosomes, except on chromosome 4. Gene structure and motifs analyses revealed that BvAQP have conserved exon-intron organization and that they exhibit conserved motifs within each subfamily. Prediction of BvAQPs functions, based on key protein domains conservation, showed a remarkable difference in substrate specificity among the five subfamilies. Analyses of BvAQPs expression, by mean of RNA-seq, in different plant organs and in response to various abiotic stresses revealed that they were ubiquitously expressed and that their expression was induced by heat and salt stresses. These results provide a reference base to address further the function of sugar beet aquaporins and to explore future applications for plants growth and development improvements as well as in response to environmental stresses.
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Affiliation(s)
- Weilong Kong
- College of Horticulture and Forestry Sciences, Huazhong Agricultural University, Key Laboratory of Horticultural Plant Biology, Ministry of Education, Wuhan, Hubei, China
| | - Shaozong Yang
- College of Horticulture and Forestry Sciences, Huazhong Agricultural University, Key Laboratory of Horticultural Plant Biology, Ministry of Education, Wuhan, Hubei, China
| | - Yulu Wang
- College of Horticulture and Forestry Sciences, Huazhong Agricultural University, Key Laboratory of Horticultural Plant Biology, Ministry of Education, Wuhan, Hubei, China
| | - Mohammed Bendahmane
- INRA-CNRS-Lyon1-ENS, Laboratoire Reproduction et Developpement des Plantes, Ecole Normale Supérieure Lyon, France
| | - Xiaopeng Fu
- College of Horticulture and Forestry Sciences, Huazhong Agricultural University, Key Laboratory of Horticultural Plant Biology, Ministry of Education, Wuhan, Hubei, China
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