51
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Heterogeneous selection on exploration behavior within and among West European populations of a passerine bird. Proc Natl Acad Sci U S A 2021; 118:2024994118. [PMID: 34234017 DOI: 10.1073/pnas.2024994118] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
Heterogeneous selection is often proposed as a key mechanism maintaining repeatable behavioral variation ("animal personality") in wild populations. Previous studies largely focused on temporal variation in selection within single populations. The relative importance of spatial versus temporal variation remains unexplored, despite these processes having distinct effects on local adaptation. Using data from >3,500 great tits (Parus major) and 35 nest box plots situated within five West-European populations monitored over 4 to 18 y, we show that selection on exploration behavior varies primarily spatially, across populations, and study plots within populations. Exploration was, simultaneously, selectively neutral in the average population and year. These findings imply that spatial variation in selection may represent a primary mechanism maintaining animal personalities, likely promoting the evolution of local adaptation, phenotype-dependent dispersal, and nonrandom settlement. Selection also varied within populations among years, which may counteract local adaptation. Our study underlines the importance of combining multiple spatiotemporal scales in the study of behavioral adaptation.
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52
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Machado HE, Bergland AO, Taylor R, Tilk S, Behrman E, Dyer K, Fabian DK, Flatt T, González J, Karasov TL, Kim B, Kozeretska I, Lazzaro BP, Merritt TJS, Pool JE, O'Brien K, Rajpurohit S, Roy PR, Schaeffer SW, Serga S, Schmidt P, Petrov DA. Broad geographic sampling reveals the shared basis and environmental correlates of seasonal adaptation in Drosophila. eLife 2021; 10:e67577. [PMID: 34155971 PMCID: PMC8248982 DOI: 10.7554/elife.67577] [Citation(s) in RCA: 53] [Impact Index Per Article: 17.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/16/2021] [Accepted: 06/21/2021] [Indexed: 11/16/2022] Open
Abstract
To advance our understanding of adaptation to temporally varying selection pressures, we identified signatures of seasonal adaptation occurring in parallel among Drosophila melanogaster populations. Specifically, we estimated allele frequencies genome-wide from flies sampled early and late in the growing season from 20 widely dispersed populations. We identified parallel seasonal allele frequency shifts across North America and Europe, demonstrating that seasonal adaptation is a general phenomenon of temperate fly populations. Seasonally fluctuating polymorphisms are enriched in large chromosomal inversions, and we find a broad concordance between seasonal and spatial allele frequency change. The direction of allele frequency change at seasonally variable polymorphisms can be predicted by weather conditions in the weeks prior to sampling, linking the environment and the genomic response to selection. Our results suggest that fluctuating selection is an important evolutionary force affecting patterns of genetic variation in Drosophila.
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Affiliation(s)
- Heather E Machado
- Department of Biology, Stanford UniversityStanfordUnited States
- Wellcome Sanger InstituteHinxtonUnited Kingdom
| | - Alan O Bergland
- Department of Biology, Stanford UniversityStanfordUnited States
- Department of Biology, University of VirginiaCharlottesvilleUnited States
| | - Ryan Taylor
- Department of Biology, Stanford UniversityStanfordUnited States
| | - Susanne Tilk
- Department of Biology, Stanford UniversityStanfordUnited States
| | - Emily Behrman
- Department of Biology, University of PennsylvaniaPhiladelphiaUnited States
| | - Kelly Dyer
- Department of Genetics, University of GeorgiaAthensUnited States
| | - Daniel K Fabian
- Institute of Population Genetics, Vetmeduni ViennaViennaAustria
- Centre for Pathogen Evolution, Department of Zoology, University of CambridgeCambridgeUnited Kingdom
| | - Thomas Flatt
- Institute of Population Genetics, Vetmeduni ViennaViennaAustria
- Department of Biology, University of FribourgFribourgSwitzerland
| | - Josefa González
- Institute of Evolutionary Biology, CSIC- Universitat Pompeu FabraBarcelonaSpain
| | - Talia L Karasov
- Department of Biology, University of UtahSalt Lake CityUnited States
| | - Bernard Kim
- Department of Biology, Stanford UniversityStanfordUnited States
| | - Iryna Kozeretska
- Taras Shevchenko National University of KyivKyivUkraine
- National Antarctic Scientific Centre of Ukraine, Taras Shevchenko Blvd.KyivUkraine
| | - Brian P Lazzaro
- Department of Entomology, Cornell UniversityIthacaUnited States
| | - Thomas JS Merritt
- Department of Chemistry & Biochemistry, Laurentian UniversitySudburyCanada
| | - John E Pool
- Laboratory of Genetics, University of Wisconsin-MadisonMadisonUnited States
| | - Katherine O'Brien
- Department of Biology, University of PennsylvaniaPhiladelphiaUnited States
| | - Subhash Rajpurohit
- Department of Biology, University of PennsylvaniaPhiladelphiaUnited States
| | - Paula R Roy
- Department of Ecology and Evolutionary Biology, University of KansasLawrenceUnited States
| | - Stephen W Schaeffer
- Department of Biology, The Pennsylvania State UniversityUniversity ParkUnited States
| | - Svitlana Serga
- Taras Shevchenko National University of KyivKyivUkraine
- National Antarctic Scientific Centre of Ukraine, Taras Shevchenko Blvd.KyivUkraine
| | - Paul Schmidt
- Department of Biology, University of PennsylvaniaPhiladelphiaUnited States
| | - Dmitri A Petrov
- Department of Biology, Stanford UniversityStanfordUnited States
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53
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Van Buskirk J, Smith DC. Ecological causes of fluctuating natural selection on habitat choice in an amphibian. Evolution 2021; 75:1862-1877. [PMID: 34096054 PMCID: PMC8362115 DOI: 10.1111/evo.14282] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2021] [Revised: 05/07/2021] [Accepted: 05/11/2021] [Indexed: 11/30/2022]
Abstract
We estimated natural selection targeting three traits related to habitat choice in a frog (Pseudacris maculata) breeding in pools on the rocky shores of Isle Royale, Michigan, over 16 years. Our aim was to identify the form and ecological causes of annual variation in directional and correlational selection as expressed in the survival and growth of tadpoles. We found directional selection favoring early breeding, but pool choice was under weak stabilizing selection. However, the form of stabilizing selection and the position of the optimum trait value shifted among years with the severity of disturbance and the intensity of biotic interactions. In years when wave wash and pool desiccation were severe, selection shifted to favor tadpoles in habitats where these risks were less pronounced. If predatory dragonfly larvae were abundant, selection favored tadpoles in small pools where dragonflies did not occur. When intraspecific competition was strong, selection favored early broods within a broader range of pool types. The agents of selection in this study—biotic interactions and disturbance—are common to many ecological systems and frequently exhibit temporal variation; this suggests that fluctuating selection may be widespread in natural populations.
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Affiliation(s)
- Josh Van Buskirk
- Department of Evolutionary Biology and Environmental Studies, University of Zurich, Zurich, Switzerland
| | - David C Smith
- Biology Department, Williams College, Williamstown, Massachusetts, 01267
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54
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Mouchet A, Dingemanse NJ. A quantitative genetics approach to validate lab- versus field-based behavior in novel environments. Behav Ecol 2021. [DOI: 10.1093/beheco/arab059] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
Abstract
Conclusions about the adaptive nature of repeatable variation in behavior (i.e., “personality”) are often derived from laboratory-based assays. However, the expression of genetic variation differs between laboratory and field. Laboratory-based behavior might not predict field-based behavior thus, cross-context validation is required. We estimated the cross-context correlation between behavior expressed by wild great tits (Parus major) in established laboratory versus field novel environment assays. Both assays have been used as proxies for “exploration tendency.” Behavior in both contexts had similar repeatability (R = 0.35 vs. 0.37) but differed in heritability (h2 = 0.06 vs. 0.23), implying differences in selection pressures. Unexpectedly, there was no cross-context correlation. Laboratory- and field-based behavior thus reflected expressions of two distinct underlying characters. Post hoc simulations revealed that sampling bias did not explain the lack of correlation. Laboratory-based behavior may reflect fear and exploration, but field-based behavior may reflect escape behavior instead, though other functional interpretations cannot be excluded. Thus, in great tits, activity expressed in laboratory versus field novel environment assays is modulated by multiple quasi-independent characters. The lack of cross-context correlation shown here may also apply to other setups, other repeatable behaviors, and other taxa. Our study thus implies care should be taken in labeling behaviors prior to firm validation studies.
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Affiliation(s)
- Alexia Mouchet
- Behavioural Ecology, Department of Biology, Ludwig Maximilian University Munich, Großhaderner Straße, Planegg-Martinsried, Germany
| | - Niels J Dingemanse
- Behavioural Ecology, Department of Biology, Ludwig Maximilian University Munich, Großhaderner Straße, Planegg-Martinsried, Germany
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55
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Fisher DN, LeGrice RJ, Painting CJ. Social selection is density dependent but makes little contribution to total selection in New Zealand giraffe weevils. Proc Biol Sci 2021; 288:20210696. [PMID: 34074126 PMCID: PMC8170205 DOI: 10.1098/rspb.2021.0696] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/23/2021] [Accepted: 05/07/2021] [Indexed: 11/12/2022] Open
Abstract
Social selection occurs when traits of interaction partners influence an individual's fitness and can alter total selection strength. However, we have little idea of what factors influence social selection's strength. Further, social selection only contributes to overall selection when there is phenotypic assortment, but simultaneous estimates of social selection and phenotypic assortment are rare. Here, we estimated social selection on body size in a wild population of New Zealand giraffe weevils (Lasiorhynchus barbicornis). We measured phenotypic assortment by body size and tested whether social selection varied with sex ratio, density and interacted with the body size of the focal individual. Social selection was limited and unaffected by sex ratio or the size of the focal individual. However, at high densities social selection was negative for both sexes, consistent with size-based competitive interactions for access to mates. Phenotypic assortment was always close to zero, indicating negative social selection at high densities will not impede the evolution of larger body sizes. Despite its predicted importance, social selection may only influence evolutionary change in specific contexts, leaving direct selection to drive evolutionary change.
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Affiliation(s)
- David N. Fisher
- School of Biological Sciences, University of Aberdeen, King's College, Aberdeen AB243FX, UK
| | - Rebecca J. LeGrice
- Te Aka Mātuatua School of Science, University of Waikato, Private Bag 3105, Hamilton 3240, New Zealand
| | - Christina J. Painting
- Te Aka Mātuatua School of Science, University of Waikato, Private Bag 3105, Hamilton 3240, New Zealand
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56
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Brachmann MK, Parsons K, Skúlason S, Ferguson MM. The interaction of resource use and gene flow on the phenotypic divergence of benthic and pelagic morphs of Icelandic Arctic charr ( Salvelinus alpinus). Ecol Evol 2021; 11:7315-7334. [PMID: 34188815 PMCID: PMC8216915 DOI: 10.1002/ece3.7563] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/06/2020] [Revised: 02/09/2021] [Accepted: 03/02/2021] [Indexed: 12/11/2022] Open
Abstract
Conceptual models of adaptive divergence and ecological speciation in sympatry predict differential resource use, phenotype-environment correlations, and reduced gene flow among diverging phenotypes. While these predictions have been assessed in past studies, connections among them have rarely been assessed collectively. We examined relationships among phenotypic, ecological, and genetic variation in Arctic charr (Salvelinus alpinus) from six Icelandic localities that have undergone varying degrees of divergence into sympatric benthic and pelagic morphs. We characterized morphological variation with geometric morphometrics, tested for differential resource use between morphs using stable isotopes, and inferred the amount of gene flow from single nucleotide polymorphisms. Analysis of stable isotopic signatures indicated that sympatric morphs showed similar difference in resource use across populations, likely arising from the common utilization of niche space within each population. Carbon isotopic signature was also a significant predictor of individual variation in body shape and size, suggesting that variation in benthic and pelagic resource use is associated with phenotypic variation. The estimated percentage of hybrids between sympatric morphs varied across populations (from 0% to 15.6%) but the majority of fish had genotypes (ancestry coefficients) characteristic of pure morphs. Despite evidence of reduced gene flow between sympatric morphs, we did not detect the expected negative relationship between divergence in resource use and gene flow. Three lakes showed the expected pattern, but morphs in the fourth showed no detectable hybridization and had relatively low differences in resource use between them. This coupled with the finding that resource use and genetic differentiation had differential effects on body shape variation across populations suggests that reproductive isolation maintains phenotypic divergence between benthic and pelagic morphs when the effects of resource use are relatively low. Our ability to assess relationships between phenotype, ecology, and genetics deepens our understanding of the processes underlying adaptive divergence in sympatry.
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Affiliation(s)
| | - Kevin Parsons
- Institute of Biodiversity, Animal Health and Comparative MedicineSchool of Life ScienceUniversity of GlasgowGlasgowUK
| | - Skúli Skúlason
- Department of Aquaculture and Fish BiologyHólar UniversitySaudárkrókurIceland
- Icelandic Museum of Natural HistoryReykjavíkIceland
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57
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Acker P, Burthe SJ, Newell MA, Grist H, Gunn C, Harris MP, Payo-Payo A, Swann R, Wanless S, Daunt F, Reid JM. Episodes of opposing survival and reproductive selection cause strong fluctuating selection on seasonal migration versus residence. Proc Biol Sci 2021; 288:20210404. [PMID: 34004132 PMCID: PMC8131125 DOI: 10.1098/rspb.2021.0404] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/17/2021] [Accepted: 04/23/2021] [Indexed: 12/18/2022] Open
Abstract
Quantifying temporal variation in sex-specific selection on key ecologically relevant traits, and quantifying how such variation arises through synergistic or opposing components of survival and reproductive selection, is central to understanding eco-evolutionary dynamics, but rarely achieved. Seasonal migration versus residence is one key trait that directly shapes spatio-seasonal population dynamics in spatially and temporally varying environments, but temporal dynamics of sex-specific selection have not been fully quantified. We fitted multi-event capture-recapture models to year-round ring resightings and breeding success data from partially migratory European shags (Phalacrocorax aristotelis) to quantify temporal variation in annual sex-specific selection on seasonal migration versus residence arising through adult survival, reproduction and the combination of both (i.e. annual fitness). We demonstrate episodes of strong and strongly fluctuating selection through annual fitness that were broadly synchronized across females and males. These overall fluctuations arose because strong reproductive selection against migration in several years contrasted with strong survival selection against residence in years with extreme climatic events. These results indicate how substantial phenotypic and genetic variation in migration versus residence could be maintained, and highlight that biologically important fluctuations in selection may not be detected unless both survival selection and reproductive selection are appropriately quantified and combined.
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Affiliation(s)
- Paul Acker
- School of Biological Sciences, University of Aberdeen, UK
- Centre for Biodiversity Dynamics, Institutt for Biologi, NTNU, Norway
| | - Sarah J. Burthe
- UK Centre for Ecology and Hydrology, Bush Estate, Penicuik, UK
| | - Mark A. Newell
- UK Centre for Ecology and Hydrology, Bush Estate, Penicuik, UK
| | - Hannah Grist
- SAMS Research Services Ltd, European Marine Science Park, Oban, UK
| | - Carrie Gunn
- UK Centre for Ecology and Hydrology, Bush Estate, Penicuik, UK
| | | | - Ana Payo-Payo
- School of Biological Sciences, University of Aberdeen, UK
| | | | - Sarah Wanless
- UK Centre for Ecology and Hydrology, Bush Estate, Penicuik, UK
| | - Francis Daunt
- UK Centre for Ecology and Hydrology, Bush Estate, Penicuik, UK
| | - Jane M. Reid
- School of Biological Sciences, University of Aberdeen, UK
- Centre for Biodiversity Dynamics, Institutt for Biologi, NTNU, Norway
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58
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Josephson MP, Bull JK. Innovative mark-recapture experiment shows patterns of selection on transcript abundance in the wild. Mol Ecol 2021; 30:2707-2709. [PMID: 33960037 DOI: 10.1111/mec.15946] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/29/2021] [Accepted: 04/16/2021] [Indexed: 11/30/2022]
Abstract
A fundamental aspect of evolutionary biology is natural selection on trait variation. Classically, selection has been estimated primarily on external morphological traits such as beak size and coloration, or on easily assayable physiological traits such as heat-tolerance. As technologies and methods improved, evolutionary biologists began examining selection on molecular traits such as protein sequences and cellular processes. In a From the Cover paper in this issue of Molecular Ecology, Ahmad et al. continue this trend by estimating parasite-driven selection on the molecular trait of transcript abundance in a wild population of brown trout (Salmo trutta) by uniquely combining a mark-recapture experimental design with noninvasive RNA sampling. Using transcript abundance to estimate selection allows for many different traits (each unique gene's transcript counts) to be tested in a single experiment, providing the opportunity to examine trends in selection. Ahmad et al. find directional selection strength on transcript counts is generally low and normally distributed. Surprisingly, transcripts under nonlinear selection showed a disruptive selection bias, contradicting previous comparative studies and theoretical work. This highlights the importance of within-generation selection studies, where mechanisms may differ from longer time frames. Their paper also highlights the benefits of a cost-effective 3' RNA sequencing technique to measure gene expression.
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Affiliation(s)
- Matthew P Josephson
- Department of Biological Sciences, University of Calgary, Calgary, AB, Canada
| | - James K Bull
- Department of Biological Sciences, University of Calgary, Calgary, AB, Canada
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59
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Abstract
AbstractUnderstanding the genetic architecture of complex trait adaptation in natural populations requires the continued development of tractable models that explicitly confront organismal and environmental complexity. A decade of high-throughput sequencing-based investigations into the genomic basis of migration points to an integrative framework that incorporates quantitative genetics, evolutionary developmental biology, phenotypic plasticity, and epigenetics to explain migration evolution. In this perspective, I argue that the transcontinental migration of the monarch butterfly (Danaus plexippus) can serve as a compelling system to study the mechanism of evolutionary lability of a complex trait. Monarchs show significant phenotypic and genotypic diversity across their global range, with phenotypic switching that allows for explicit study of evolutionary lability. A developmental approach for elucidating how migratory traits are generated and functionally integrated will be important for understanding the evolution of monarch migration traits. I propose a plasticity threshold model to describe migration lability, and I describe novel functional techniques that will help resolve open questions and model assumptions. I conclude by considering the relationships between adaptive genetic architecture, anthropogenic climate change, and conservation management practice and the timeliness of the monarch migration model to illuminate these connections given the rapid decline of the North American migration.
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60
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Shogren EH, Jones MA, Boyle WA. Dancing in the rain: how do abiotic conditions influence sexually selected behaviors in the White-ruffed Manakin? Integr Comp Biol 2021; 61:1329-1342. [PMID: 34015118 DOI: 10.1093/icb/icab085] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
Tropical animals respond to rainfall in population-specific ways. In extremely wet regions, endotherms experience heavy rains as stressors with consequences for behavior and demography. Ultimately, such stressors can affect the relative strength of abiotic selection, reducing the scope for sexual selection and other biotic sources of selection. We studied population-level differences in the response to rainfall in White-ruffed Manakins (Corapipo altera) on the Caribbean slope of Costa Rica, a species having a lek mating system subject to strong sexual selection. Between 2008 and 2013, we studied reproductive behavior in a population inhabiting an extremely wet site; estimates of apparent survival were low, and the turnover of display courts and dominant males was high. Males also engaged in coordinated display, and sub-adult males practiced in the presence of adults. Over three breeding seasons (2017-2019), we studied a population of the same species at a site only 110 km away, but in a location receiving roughly half as much rain. We tested behavioral predictions of three alternative mechanisms-indirect abiotic effects, direct mortality effects, and direct behavioral effects-linking rainfall to sexual selection in these two populations. Data derived from over 4300 hr of observations at 105 display sites revealed high interannual variation in nearly all response variables, including turnover of display sites, retention of alpha status, male display behavior, and time females spent assessing male display. Additionally, we detected spatial differences in drivers of display site turnover. Notably, age distribution of males was skewed toward older individuals at the drier location. Based on these findings we infer that indirect abiotic effects on forest structure leading to display site transience and direct effects of mortality increasing turnover in the male population likely underlie links between rain and the spatial and temporal differences we documented. Our results are consistent with rain constituting an important source of abiotic selection for tropical endotherms and modulating the scope for sexual selection near the extremes of a species' hygric niche.
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Affiliation(s)
- Elsie H Shogren
- Department of Biology, University of Rochester, Rochester, NY 14627, USA
| | | | - W Alice Boyle
- Division of Biology, Kansas State University, Manhattan, KS 66506, USA
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61
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Blanckenhorn WU, Baur J, Roy J, Puniamoorthy N, Busso JP, Schäfer MA, Rohner PT. Comparative sexual selection in field and laboratory in a guild of sepsid dung flies. Anim Behav 2021. [DOI: 10.1016/j.anbehav.2021.03.001] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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62
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Lange EC, Travis J, Hughes KA, M'Gonigle LK. Can You Trust Who You See? The Evolution of Socially Cued Anticipatory Plasticity. Am Nat 2021; 197:E129-E142. [PMID: 33755539 DOI: 10.1086/712919] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
Abstract
AbstractThe social environment can affect development and fitness. However, we do not know how selection acts on individuals that cue developmental pathways using features of the social environment. Socially cued anticipatory plasticity (SCAP) is a hypothetical strategy whereby juveniles use social cues to alter development to match their adult phenotype to the social environment that they expect to encounter. While intuitively appealing, the evolution of such plasticity is a puzzle, because the cue changes when individuals use it. Can socially cued plasticity evolve when such a feedback occurs? We use individual-based simulations to model evolution of SCAP in an environment that fluctuates between favoring each of two discrete phenotypes. We found that socially cued plasticity evolved, but only when strong selection acted on survival rather than on fecundity differences between adult phenotypes. In this case, the social cue reliably predicted which phenotype would be favored on maturation. Surprisingly, costs to plasticity increased the range of conditions under which it was adaptive. In the absence of costs, evolution led to a state where SCAP individuals could not effectively respond to environmental changes. Costs to plasticity lowered the proportion of the population that used SCAP, which in turn increased the reliability of the social cue and allowed individuals that used socially cued plasticity to switch between the favored phenotypes more consistently. Our results suggest that the evolution of adaptive plasticity in response to social cues may represent a larger class of problems in which evolution is hard to predict because of feedbacks among critical processes.
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63
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Gompert Z. A population-genomic approach for estimating selection on polygenic traits in heterogeneous environments. Mol Ecol Resour 2021; 21:1529-1546. [PMID: 33682340 DOI: 10.1111/1755-0998.13371] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/02/2020] [Accepted: 02/25/2021] [Indexed: 01/07/2023]
Abstract
Strong selection can cause rapid evolutionary change, but temporal fluctuations in the form, direction and intensity of selection can limit net evolutionary change over longer time periods. Fluctuating selection could affect molecular diversity levels and the evolution of plasticity and ecological specialization. Nonetheless, this phenomenon remains understudied, in part because of analytical limitations and the general difficulty of detecting selection that does not occur in a consistent manner. Herein, I fill this analytical gap by presenting an approximate Bayesian computation (ABC) method to detect and quantify fluctuating selection on polygenic traits from population genomic time-series data. I propose a model for environment-dependent phenotypic selection. The evolutionary genetic consequences of selection are then modelled based on a genotype-phenotype map. Using simulations, I show that the proposed method generates accurate and precise estimates of selection when the generative model for the data is similar to the model assumed by the method. The performance of the method when applied to an evolve-and-resequence study of host adaptation in the cowpea seed beetle (Callosobruchus maculatus) was more idiosyncratic and depended on specific analytical choices. Despite some limitations, these results suggest the proposed method provides a powerful approach to connect the causes of (variable) selection to traits and genome-wide patterns of evolution. Documentation and open-source computer software (fsabc) implementing this method are available from github (https://github.com/zgompert/fsabc.git).
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Affiliation(s)
- Zachariah Gompert
- Department of Biology, Utah State University, Logan, UT, USA.,Ecology Center, Utah State University, Logan, UT, USA
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64
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Dingemanse NJ, Araya-Ajoy YG, Westneat DF. Most published selection gradients are underestimated: Why this is and how to fix it. Evolution 2021; 75:806-818. [PMID: 33621355 DOI: 10.1111/evo.14198] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/02/2020] [Revised: 01/29/2021] [Accepted: 02/12/2021] [Indexed: 02/06/2023]
Abstract
Ecologists and evolutionary biologists routinely estimate selection gradients. Most researchers seek to quantify selection on individual phenotypes, regardless of whether fixed or repeatedly expressed traits are studied. Selection gradients estimated to address such questions are attenuated unless analyses account for measurement error and biological sources of within-individual variation. Estimates of standardized selection gradients published in Evolution between 2010 and 2019 were primarily based on traits measured once (59% of 325 estimates). We show that those are attenuated: bias increases with decreasing repeatability but differently for linear versus nonlinear gradients. Others derived individual-mean trait values prior to analyses (41%), typically using few repeats per individual, which does not remove bias. We evaluated three solutions, all requiring repeated measures: (i) correcting gradients derived from classic models using estimates of trait correlations and repeatabilities, (ii) multivariate mixed-effects models, previously used for estimating linear gradients (seven estimates, 2%), which we expand to nonlinear analyses, and (iii) errors-in-variables models that account for within-individual variance, and are rarely used in selection studies. All approaches produced accurate estimates regardless of repeatability and type of gradient, however, errors-in-variables models produced more precise estimates and may thus be preferable.
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Affiliation(s)
- Niels Jeroen Dingemanse
- Department of Biology, Ludwig-Maximilians-Universitat Munchen Department Biologie II, Planegg-Martinsried, Germany
| | - Yimen G Araya-Ajoy
- Center for Biodiversity Dynamics, Norwegian University of Science and Technology, Trondheim, 7012, Norway
| | - David F Westneat
- Department of Biology, University of Kentucky, Lexington, Kentucky
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65
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Sapir Y, Gallagher MK, Senden E. What Maintains Flower Colour Variation within Populations? Trends Ecol Evol 2021; 36:507-519. [PMID: 33663870 DOI: 10.1016/j.tree.2021.01.011] [Citation(s) in RCA: 26] [Impact Index Per Article: 8.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2020] [Revised: 01/24/2021] [Accepted: 01/26/2021] [Indexed: 02/06/2023]
Abstract
Natural selection acts on phenotypic trait variation. Understanding the mechanisms that create and maintain trait variation is fundamental to understanding the breadth of diversity seen on Earth. Flower colour is among the most conspicuous and highly diverse traits in nature. Most flowering plant populations have uniform floral colours, but a minority exhibit within-population colour variation, either discrete (polymorphic) or continuous. Colour variation is commonly maintained by balancing selection through multiple pollinators, opposing selection regimes, or fluctuating selection. Variation can also be maintained by heterozygote advantage or frequency-dependent selection. Neutral processes, or a lack of selection, may maintain variation, although this remains largely untested. We suggest several prospective research directions that may provide insight into the evolutionary drivers of trait variation.
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Affiliation(s)
- Yuval Sapir
- The Botanical Garden, School of Plant Sciences and Food Security, Tel Aviv University, Ramat Aviv, Tel Aviv 69978, Israel.
| | - M Kate Gallagher
- The Botanical Garden, School of Plant Sciences and Food Security, Tel Aviv University, Ramat Aviv, Tel Aviv 69978, Israel
| | - Esther Senden
- The Botanical Garden, School of Plant Sciences and Food Security, Tel Aviv University, Ramat Aviv, Tel Aviv 69978, Israel
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66
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Langerhans RB, Rosa-Molinar E. A Novel Body Plan Alters Diversification of Body Shape and Genitalia in Live-Bearing Fish. Front Ecol Evol 2021. [DOI: 10.3389/fevo.2021.619232] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
Major evolutionary innovations can greatly influence subsequent evolution. While many major transitions occurred in the deep past, male live-bearing fishes (family Poeciliidae) more recently evolved a novel body plan. This group possesses a three-region axial skeleton, with one region—the ano-urogenital region—representing a unique body region accommodating male genitalic structures (gonopodial complex). Here we evaluate several hypotheses for the evolution of diversity in this region and examine its role in the evolution of male body shape. Examining Gambusia fishes, we tested a priori predictions for (1) joint influence of gonopodial-complex traits on mating performance, (2) correlated evolution of gonopodial-complex traits at macro- and microevolutionary scales, and (3) predator-driven evolution of gonopodial-complex traits in a post-Pleistocene radiation of Bahamas mosquitofish. We found the length of the sperm-transfer organ (gonopodium) and its placement along the body (gonopodial anterior transposition) jointly influenced mating success, with correlational selection favoring particular trait combinations. Despite these two traits functionally interacting during mating, we found no evidence for their correlated evolution at macro- or microevolutionary scales. In contrast, we did uncover correlated evolution of modified vertebral hemal spines (part of the novel body region) and gonopodial anterior transposition at both evolutionary scales, matching predictions of developmental connections between these components. Developmental linkages in the ano-urogenital region apparently play key roles in evolutionary trajectories, but multiple selective agents likely act on gonopodium length and cause less predictable evolution. Within Bahamas mosquitofish, evolution of hemal-spine morphology, and gonopodial anterior transposition across predation regimes was quite predictable, with populations evolving under high predation risk showing more modified hemal spines with greater modifications and a more anteriorly positioned gonopodium. These changes in the ano-urogenital vertebral region have facilitated adaptive divergence in swimming abilities and body shape between predation regimes. Gonopodium surface area, but not length, evolved as predicted in Bahamas mosquitofish, consistent with a previously suggested tradeoff between natural and sexual selection on gonopodium size. These results provide insight into how restructured body plans offer novel evolutionary solutions. Here, a novel body region—originally evolved to aid sperm transfer—was apparently co-opted to alter whole-organism performance, facilitating phenotypic diversification.
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67
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Di Martino E, Liow LH. Trait-fitness associations do not predict within-species phenotypic evolution over 2 million years. Proc Biol Sci 2021; 288:20202047. [PMID: 33468005 PMCID: PMC7893266 DOI: 10.1098/rspb.2020.2047] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023] Open
Abstract
Long-term patterns of phenotypic change are the cumulative results of tens of thousands to millions of years of evolution. Yet, empirical and theoretical studies of phenotypic selection are largely based on contemporary populations. The challenges in studying phenotypic evolution, in particular trait-fitness associations in the deep past, are barriers to linking micro- and macroevolution. Here, we capitalize on the unique opportunity offered by a marine colonial organism commonly preserved in the fossil record to investigate trait-fitness associations over 2 Myr. We use the density of female polymorphs in colonies of Antartothoa tongima as a proxy for fecundity, a fitness component, and investigate multivariate signals of trait-fitness associations in six time intervals on the backdrop of Pleistocene climatic shifts. We detect negative trait-fitness associations for feeding polymorph (autozooid) sizes, positive associations for autozooid shape but no particular relationship between fecundity and brood chamber size. In addition, we demonstrate that long-term trait patterns are explained by palaeoclimate (as approximated by ∂18O), and to a lesser extent by ecological interactions (i.e. overgrowth competition and substrate crowding). Our analyses show that macroevolutionary outcomes of trait evolution are not a simple scaling-up from the trait-fitness associations.
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Affiliation(s)
| | - Lee Hsiang Liow
- Natural History Museum, University of Oslo, Oslo, Norway.,Centre for Ecological and Evolutionary Synthesis, Department of Biosciences, University of Oslo, Oslo, Norway
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68
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Blondel L, Paterson IG, Bentzen P, Hendry AP. Resistance and resilience of genetic and phenotypic diversity to "black swan" flood events: A retrospective analysis with historical samples of guppies. Mol Ecol 2021; 30:1017-1028. [PMID: 33346935 DOI: 10.1111/mec.15782] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/16/2020] [Revised: 12/04/2020] [Accepted: 12/14/2020] [Indexed: 01/05/2023]
Abstract
Rare extreme "black swan" disturbances can impact ecosystems in many ways, such as destroying habitats, depleting resources, and causing high mortality. In rivers, for instance, exceptional floods that occur infrequently (e.g., so-called "50-year floods") can strongly impact the abundance of fishes and other aquatic organisms. Beyond such ecological effects, these floods could also impact intraspecific diversity by elevating genetic drift or dispersal and by imposing strong selection, which could then influence the population's ability to recover from disturbance. And yet, natural systems might be resistant (show little change) or resilient (show rapid recovery) even to rare extreme events - perhaps as a result of selection due to past events. We considered these possibilities in two rivers where native guppies experienced two extreme floods - one in 2005 and another in 2016. For each river, we selected four sites and used archived "historical" samples to compare levels of genetic and phenotypic diversity before vs. after floods. Genetic diversity was represented by 33 neutral microsatellite markers, and phenotypic diversity was represented by body length and male melanic (black) colour. We found that genetic diversity and population structure was mostly "resistant" to even these extreme floods; whereas the larger impacts on phenotypic diversity were short-lived, suggesting additional "resilience". We discuss the determinants of these two outcomes for guppies facing floods, and then consider the general implications for the resistance and resilience of intraspecific variation to black swan disturbances.
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Affiliation(s)
- Léa Blondel
- Redpath Museum and Department of Biology, McGill University, Montreal, QC, Canada
| | - Ian G Paterson
- Department of Biology, Dalhousie University, Halifax, NS, Canada
| | - Paul Bentzen
- Department of Biology, Dalhousie University, Halifax, NS, Canada
| | - Andrew P Hendry
- Redpath Museum and Department of Biology, McGill University, Montreal, QC, Canada
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69
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Albertsen E, Opedal ØH, Bolstad GH, Pérez-Barrales R, Hansen TF, Pélabon C, Armbruster WS. Using ecological context to interpret spatiotemporal variation in natural selection. Evolution 2020; 75:294-309. [PMID: 33230820 DOI: 10.1111/evo.14136] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/08/2019] [Revised: 09/20/2020] [Accepted: 10/03/2020] [Indexed: 12/14/2022]
Abstract
Spatiotemporal variation in natural selection is expected, but difficult to estimate. Pollinator-mediated selection on floral traits provides a good system for understanding and linking variation in selection to differences in ecological context. We studied pollinator-mediated selection in five populations of Dalechampia scandens (Euphorbiaceae) in Costa Rica and Mexico. Using a nonlinear path-analytical approach, we assessed several functional components of selection, and linked variation in pollinator-mediated selection across time and space to variation in pollinator assemblages. After correcting for estimation error, we detected moderate variation in net selection on two out of four blossom traits. Both the opportunity for selection and the mean strength of selection decreased with increasing reliability of cross-pollination. Selection for pollinator attraction was consistently positive and stronger on advertisement than reward traits. Selection on traits affecting pollen transfer from the pollinator to the stigmas was strong only when cross-pollination was unreliable and there was a mismatch between pollinator and blossom size. These results illustrate how consideration of trait function and ecological context can facilitate both the detection and the causal understanding of spatiotemporal variation in natural selection.
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Affiliation(s)
- Elena Albertsen
- Norwegian Institute for Bioeconomy Research, Trondheim, 7031, Norway.,Centre for Biodiversity Dynamics, Department of Biology, Norwegian University of Science and Technology, Trondheim, 7491, Norway
| | - Øystein H Opedal
- Centre for Biodiversity Dynamics, Department of Biology, Norwegian University of Science and Technology, Trondheim, 7491, Norway.,Department of Biology, Lund University, Lund, SE-22362, Sweden
| | - Geir H Bolstad
- Norwegian Institute for Nature Research (NINA), Trondheim, 7485, Norway
| | - Rocío Pérez-Barrales
- School of Biological Sciences, University of Portsmouth, Portsmouth, PO1 2DY, United Kingdom
| | - Thomas F Hansen
- Centre for Ecological and Evolutionary Synthesis, Department of Biology, University of Oslo, Oslo, 0316, Norway
| | - Christophe Pélabon
- Centre for Biodiversity Dynamics, Department of Biology, Norwegian University of Science and Technology, Trondheim, 7491, Norway
| | - W Scott Armbruster
- School of Biological Sciences, University of Portsmouth, Portsmouth, PO1 2DY, United Kingdom.,Institute of Arctic Biology, University of Alaska, Fairbanks, Alaska, 99775, USA
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70
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de Villemereuil P, Charmantier A, Arlt D, Bize P, Brekke P, Brouwer L, Cockburn A, Côté SD, Dobson FS, Evans SR, Festa-Bianchet M, Gamelon M, Hamel S, Hegelbach J, Jerstad K, Kempenaers B, Kruuk LEB, Kumpula J, Kvalnes T, McAdam AG, McFarlane SE, Morrissey MB, Pärt T, Pemberton JM, Qvarnström A, Røstad OW, Schroeder J, Senar JC, Sheldon BC, van de Pol M, Visser ME, Wheelwright NT, Tufto J, Chevin LM. Fluctuating optimum and temporally variable selection on breeding date in birds and mammals. Proc Natl Acad Sci U S A 2020; 117:31969-31978. [PMID: 33257553 PMCID: PMC7116484 DOI: 10.1073/pnas.2009003117] [Citation(s) in RCA: 57] [Impact Index Per Article: 14.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/07/2020] [Accepted: 09/24/2020] [Indexed: 01/01/2023] Open
Abstract
Temporal variation in natural selection is predicted to strongly impact the evolution and demography of natural populations, with consequences for the rate of adaptation, evolution of plasticity, and extinction risk. Most of the theory underlying these predictions assumes a moving optimum phenotype, with predictions expressed in terms of the temporal variance and autocorrelation of this optimum. However, empirical studies seldom estimate patterns of fluctuations of an optimum phenotype, precluding further progress in connecting theory with observations. To bridge this gap, we assess the evidence for temporal variation in selection on breeding date by modeling a fitness function with a fluctuating optimum, across 39 populations of 21 wild animals, one of the largest compilations of long-term datasets with individual measurements of trait and fitness components. We find compelling evidence for fluctuations in the fitness function, causing temporal variation in the magnitude, but not the direction of selection. However, fluctuations of the optimum phenotype need not directly translate into variation in selection gradients, because their impact can be buffered by partial tracking of the optimum by the mean phenotype. Analyzing individuals that reproduce in consecutive years, we find that plastic changes track movements of the optimum phenotype across years, especially in bird species, reducing temporal variation in directional selection. This suggests that phenological plasticity has evolved to cope with fluctuations in the optimum, despite their currently modest contribution to variation in selection.
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Affiliation(s)
- Pierre de Villemereuil
- Centre d'Écologie Fonctionnelle et Évolutive, CNRS, Université de Montpellier, Université Paul Valéry Montpellier 3, École Pratique des Hautes Études | Paris Science et Lettres, Institut de Recherche pour le Développement, 34000 Montpellier, France;
- Institut de Systématique, Évolution, Biodiversité, École Pratique des Hautes Études | Paris Sciences et Lettres, Muséum National d'Histoire Naturelle, CNRS, Sorbonne Université, Université des Antilles, 75005 Paris, France
| | - Anne Charmantier
- Centre d'Écologie Fonctionnelle et Évolutive, CNRS, Université de Montpellier, Université Paul Valéry Montpellier 3, École Pratique des Hautes Études | Paris Science et Lettres, Institut de Recherche pour le Développement, 34000 Montpellier, France
| | - Debora Arlt
- Department of Ecology, Swedish University of Agricultural Sciences, 75007 Uppsala, Sweden
| | - Pierre Bize
- School of Biological Sciences, University of Aberdeen, AB24 2TZ Aberdeen, United Kingdom
| | - Patricia Brekke
- Institute of Zoology, Zoological Society of London, NW1 4RY London, United Kingdom
| | - Lyanne Brouwer
- Division of Ecology and Evolution, Research School of Biology, The Australian National University, Canberra, ACT 2600 Australia
- Department of Animal Ecology, Netherlands Institute of Ecology, 6700 AB Wageningen, The Netherlands
- Department of Animal Ecology and Physiology, Institute for Water and Wetland Research, Radboud University, 6500 GL Nijmegen, The Netherlands
| | - Andrew Cockburn
- Division of Ecology and Evolution, Research School of Biology, The Australian National University, Canberra, ACT 2600 Australia
| | - Steeve D Côté
- Département de Biologie and Centre d'Études Nordiques, Université Laval, Québec, G1V 0A6 QC, Canada
| | - F Stephen Dobson
- Department of Biological Sciences, Auburn University, Auburn, AL 36849
| | - Simon R Evans
- Edward Grey Institute, Department of Zoology, University of Oxford, Oxford OX1 3PS, United Kingdom
- Centre for Ecology and Conservation, University of Exeter, Penryn TR10 9FE, United Kingdom
| | - Marco Festa-Bianchet
- Département de biologie, Université de Sherbrooke, J1K 2R1 Sherbrooke, Québec, Canada
- Division of Ecology and Evolution, Research School of Biology, The Australian National University, Canberra, ACT 2600 Australia
| | - Marlène Gamelon
- Centre for Biodiversity Dynamics, Department of Biology, Norwegian University of Science and Technology, 7491 Trondheim, Norway
| | - Sandra Hamel
- Département de Biologie, Université Laval, Québec, G1V 0A6 QC, Canada
| | - Johann Hegelbach
- Institute of Evolutionary Biology and Environmental Studies, University of Zurich, CH-8057 Zurich, Switzerland
| | | | - Bart Kempenaers
- Department of Behavioural Ecology and Evolutionary Genetics, Max Planck Institute for Ornithology, 82319 Seewiesen, Germany
| | - Loeske E B Kruuk
- Division of Ecology and Evolution, Research School of Biology, The Australian National University, Canberra, ACT 2600 Australia
| | - Jouko Kumpula
- Terrestrial Population Dynamics, Natural Resources Institute Finland, FIN-999870, Inari, Finland
| | - Thomas Kvalnes
- Centre for Biodiversity Dynamics, Department of Biology, Norwegian University of Science and Technology, 7491 Trondheim, Norway
| | - Andrew G McAdam
- Department of Ecology and Evolutionary Biology, University of Colorado, Boulder, CO 80309
| | - S Eryn McFarlane
- Department of Ecology and Genetics, Uppsala University, 75236 Uppsala, Sweden
- Institute of Evolutionary Biology, School of Biological Sciences, University of Edinburgh, Edinburgh EH9 3FL, United Kingdom
| | - Michael B Morrissey
- School of Biology, University of St. Andrews, St. Andrews, Fife KY16 9TH, United Kingdom
| | - Tomas Pärt
- Department of Ecology, Swedish University of Agricultural Sciences, 75007 Uppsala, Sweden
| | - Josephine M Pemberton
- Institute of Evolutionary Biology, School of Biological Sciences, University of Edinburgh, Edinburgh EH9 3FL, United Kingdom
| | - Anna Qvarnström
- Department of Ecology and Genetics, Uppsala University, 75236 Uppsala, Sweden
| | - Ole Wiggo Røstad
- Faculty of Environmental Sciences and Natural Resource Management, Norwegian University of Life Sciences, 1432 Ås, Norway
| | - Julia Schroeder
- Department of Life Sciences, Imperial College London, SL5 7PY Ascot, Berks,
| | - Juan Carlos Senar
- Behavioural and Evolutionary Ecology Research Unit, Museu de Ciències Naturals de Barcelona, E-08003 Barcelona, Spain
| | - Ben C Sheldon
- Edward Grey Institute, Department of Zoology, University of Oxford, Oxford OX1 3PS, United Kingdom
| | - Martijn van de Pol
- Department of Animal Ecology, Netherlands Institute of Ecology, 6700 AB Wageningen, The Netherlands
| | - Marcel E Visser
- Department of Animal Ecology, Netherlands Institute of Ecology, 6700 AB Wageningen, The Netherlands
| | | | - Jarle Tufto
- Centre for Biodiversity Dynamics, Department of Mathematics, Norwegian University of Science and Technology, NO-7491 Trondheim, Norway
| | - Luis-Miguel Chevin
- Centre d'Écologie Fonctionnelle et Évolutive, CNRS, Université de Montpellier, Université Paul Valéry Montpellier 3, École Pratique des Hautes Études | Paris Science et Lettres, Institut de Recherche pour le Développement, 34000 Montpellier, France;
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71
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Ahmad F, Debes PV, Nousiainen I, Kahar S, Pukk L, Gross R, Ozerov M, Vasemägi A. The strength and form of natural selection on transcript abundance in the wild. Mol Ecol 2020; 30:2724-2737. [PMID: 33219570 PMCID: PMC8246785 DOI: 10.1111/mec.15743] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/27/2020] [Revised: 10/15/2020] [Accepted: 11/06/2020] [Indexed: 01/01/2023]
Abstract
Gene transcription variation is known to contribute to disease susceptibility and adaptation, but we currently know very little about how contemporary natural selection shapes transcript abundance. Here, we propose a novel analytical framework to quantify the strength and form of ongoing natural selection at the transcriptome level in a wild vertebrate. We estimated selection on transcript abundance in a cohort of a wild salmonid fish (Salmo trutta) affected by an extracellular myxozoan parasite (Tetracapsuloides bryosalmonae) through mark–recapture field sampling and the integration of RNA‐sequencing with classical regression‐based selection analysis. We show, based on fin transcriptomes of the host, that infection by the parasite and subsequent host survival is linked to upregulation of mitotic cell cycle process. We also detect a widespread signal of disruptive selection on transcripts linked to host immune defence, host–pathogen interactions, cellular repair and maintenance. Our results provide insights into how selection can be measured at the transcriptome level to dissect the molecular mechanisms of contemporary evolution driven by climate change and emerging anthropogenic threats. We anticipate that the approach described here will enable critical information on the molecular processes and targets of natural selection to be obtained in real time. see also the Perspective by Matthew P. Josephson and James K. Bull.
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Affiliation(s)
- Freed Ahmad
- Department of Biology, University of Turku, Turku, Finland
| | - Paul V Debes
- Department of Aquaculture and Fish Biology, Hólar University, Sauðárkrókur, Iceland
| | - Ilkka Nousiainen
- Department of Aquaculture, Institute of Veterinary Medicine and Animal Sciences, Estonian University of Life Sciences, Tartu, Estonia
| | - Siim Kahar
- Department of Biology, University of Turku, Turku, Finland.,Department of Aquaculture, Institute of Veterinary Medicine and Animal Sciences, Estonian University of Life Sciences, Tartu, Estonia
| | - Lilian Pukk
- Department of Aquaculture, Institute of Veterinary Medicine and Animal Sciences, Estonian University of Life Sciences, Tartu, Estonia
| | - Riho Gross
- Department of Aquaculture, Institute of Veterinary Medicine and Animal Sciences, Estonian University of Life Sciences, Tartu, Estonia
| | - Mikhail Ozerov
- Department of Biology, University of Turku, Turku, Finland.,Department of Aquatic Resources, Swedish University of Agricultural Sciences, Drottningholm, Sweden
| | - Anti Vasemägi
- Department of Aquaculture, Institute of Veterinary Medicine and Animal Sciences, Estonian University of Life Sciences, Tartu, Estonia.,Department of Aquatic Resources, Swedish University of Agricultural Sciences, Drottningholm, Sweden
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72
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De Lisle SP, Punzalan D, Rollinson N, Rowe L. Extinction and the temporal distribution of macroevolutionary bursts. J Evol Biol 2020; 34:380-390. [PMID: 33205504 PMCID: PMC7983991 DOI: 10.1111/jeb.13741] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2020] [Revised: 09/29/2020] [Accepted: 11/10/2020] [Indexed: 11/30/2022]
Abstract
Phenotypic evolution through deep time is slower than expected from microevolutionary rates. This is the paradox of stasis. Previous models suggest stasis occurs because populations track adaptive peaks that remain relatively stable on million‐year intervals, raising the equally perplexing question of why these large changes are so rare. Here, we consider the possibility that peaks can move more rapidly than populations can adapt, resulting in extinction. We model peak movement with explicit population dynamics, parameterized with published microevolutionary estimates. Allowing extinction greatly increases the parameter space of peak movements that yield the appearance of stasis observed in real data through deep time. Extreme peak displacements, regardless of their frequency, will rarely result in an equivalent degree of trait evolution because of extinction. Thus, larger peak displacements will rarely be inferred using trait data from extant species or observed in fossil records. Our work highlights population ecology as an important contributor to macroevolutionary dynamics, presenting an alternative perspective on the paradox of stasis, where apparent constraint on phenotypic evolution in deep time reflects our restricted view of the subset of earth's lineages that were fortunate enough to reside on relatively stable peaks.
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Affiliation(s)
- Stephen P De Lisle
- Evolutionary Ecology Unit, Department of Biology, Lund University, Lund, Sweden
| | - David Punzalan
- Department of Biology, University of Victoria, Victoria, BC, Canada
| | - Njal Rollinson
- Department of Ecology and Evolutionary Biology, University of Toronto, Toronto, ON, Canada.,School of the Environment, University of Toronto, Toronto, ON, Canada
| | - Locke Rowe
- Department of Ecology and Evolutionary Biology, University of Toronto, Toronto, ON, Canada.,Swedish Collegium for Advanced Study, Uppsala, Sweden
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73
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Increasing our ability to predict contemporary evolution. Nat Commun 2020; 11:5592. [PMID: 33154385 PMCID: PMC7645684 DOI: 10.1038/s41467-020-19437-x] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/09/2020] [Accepted: 10/15/2020] [Indexed: 12/21/2022] Open
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74
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Local adaptation of antipredator behaviors in populations of a temperate reef fish. Oecologia 2020; 194:571-584. [PMID: 32964291 DOI: 10.1007/s00442-020-04757-y] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/27/2019] [Accepted: 09/09/2020] [Indexed: 10/23/2022]
Abstract
The temperament of animals can vary among individuals and among populations, but it is often unclear whether spatial variation in temperament is the result of acclimation to local environmental conditions or genetic adaptation to spatial differences in natural selection. This study tested whether populations of a marine fish that experience different levels of mortality and fishing exhibited local adaptation in behaviors related to predator avoidance and evasion. First, we measured variation in reactivity to perceived risk in wild populations of black surfperch (Embiotoca jacksoni). We compared flight initiation distances (FID) between populations with significantly different mortality rates. After finding that FID values were substantially lower in the low-risk locations, we tested for local adaptation by rearing lab-born offspring from both high- and low-risk populations in a common environment before measuring their behavior. Lab-reared offspring from high- and low-risk populations exhibited significant differences in several behaviors related to reactivity. Between 23 and 43% of the total variation in behaviors we measured could be attributed to source population. These results thus suggest that a substantial amount of spatial variation in behaviors related to predator evasion may represent local adaptation. In addition, behaviors we measured had an average, broad-sense heritability of 0.24, suggesting that the behavioral tendencies of these populations have some capacity to evolve further in response to any changes in selection.
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75
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Ulaski ME, Finkle H, Westley PAH. Direction and magnitude of natural selection on body size differ among age-classes of seaward-migrating Pacific salmon. Evol Appl 2020; 13:2000-2013. [PMID: 32908600 PMCID: PMC7463379 DOI: 10.1111/eva.12957] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2019] [Revised: 01/29/2020] [Accepted: 02/24/2020] [Indexed: 11/29/2022] Open
Abstract
Due to the mediating role of body size in determining fitness, the "bigger-is-better" hypothesis still pervades evolutionary ecology despite evidence that natural selection on phenotypic traits varies in time and space. For Pacific salmon (genus Oncorhynchus), most individual studies quantify selection across a narrow range of sizes and ages; therefore, uncertainties remain concerning how selection on size may differ among diverse life histories. Here, we quantify the direction and magnitude of natural selection on body size among age-classes of multiple marine cohorts of O. nerka (sockeye salmon). Across four cohorts of seaward migrants, we calculated standardized selection differentials by comparing observed size distributions of out-migrating juvenile salmon to back-calculated smolt length from the scales of surviving, returning adults. Results reveal the magnitude of selection on size was very strong (>90th percentile compared to a database of 3,759 linear selection differentials) and consistent among years. However, the direction of selection on size consistently varied among age-classes. Selection was positive for fish migrating to sea after two years in freshwater (age 2) and in their first year of life (age 0), but negative for fish migrating after 1 year in freshwater (age 1). The absolute magnitude of selection was negatively correlated to mean ocean-entry timing, which may underpin negative selection favoring small age-1 fish, given associations between size and timing of seaward migration. Collectively, these results indicate that "bigger is not always better" in terms of survival and emphasize trade-offs that may exist between fitness components for organisms with similarly diverse migratory life histories.
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Affiliation(s)
- Marta E. Ulaski
- Department of FisheriesCollege of Fisheries and Ocean SciencesUniversity of Alaska FairbanksFairbanksAlaska
| | | | - Peter A. H. Westley
- Department of FisheriesCollege of Fisheries and Ocean SciencesUniversity of Alaska FairbanksFairbanksAlaska
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76
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Jacquemyn H, Brys R. Lack of strong selection pressures maintains wide variation in floral traits in a food-deceptive orchid. ANNALS OF BOTANY 2020; 126:445-453. [PMID: 32333761 PMCID: PMC7424767 DOI: 10.1093/aob/mcaa080] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/17/2020] [Accepted: 04/23/2020] [Indexed: 05/27/2023]
Abstract
BACKGROUND AND AIMS Angiosperms vary remarkably in traits such as colour, size and shape of flowers, yet such variation generally tends to be low within species. In deceptive orchids, however, large variation in floral traits has been described, not only between but also within populations. Nonetheless, the factors driving variation in floral traits in deceptive orchids remain largely unclear. METHODS To identify determinants of variation in floral traits, we investigated patterns of fruit set and selection gradients in the food-deceptive orchid Orchis purpurea, which typically presents large within-population variation in the colour and size of the flowers. Using long-term data, fruit set was quantified in two populations over 16 consecutive years (2004-2019). Artificial hand pollination was performed to test the hypothesis that fruit set was pollinator-limited and that selfing led to decreased seed set and viability. Annual variation (2016-2019) in selection gradients was calculated for three colour traits (brightness, contrast and the number of spots on the labellum), flower size (spur length, labellum length and width) and plant size (number of flowers, plant height). KEY RESULTS Fruit set was, on average, low (~12 %) and severely pollinator-limited. Opportunities for selection varied strongly across years, but we found only weak evidence for selection on floral traits. In contrast, there was strong and consistent positive selection on floral display. Selfing led to reduced production of viable seeds and hence severe inbreeding depression (δ = 0.38). CONCLUSION Overall, these results demonstrate that the large variation in flower colour and size that is regularly observed in natural O. purpurea populations is maintained by the consistent lack of strong selection pressures on these traits through time.
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Affiliation(s)
- Hans Jacquemyn
- Department of Biology, Plant Conservation and Population Biology, KU Leuven, Leuven, Belgium
| | - Rein Brys
- Research Institute for Forest and Nature, Geraardsbergen, Belgium
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77
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Reid JM, Souter M, Fenn SR, Acker P, Payo-Payo A, Burthe SJ, Wanless S, Daunt F. Among-individual and within-individual variation in seasonal migration covaries with subsequent reproductive success in a partially migratory bird. Proc Biol Sci 2020; 287:20200928. [PMID: 32693718 PMCID: PMC7423652 DOI: 10.1098/rspb.2020.0928] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/24/2020] [Accepted: 06/30/2020] [Indexed: 01/05/2023] Open
Abstract
Within-individual and among-individual variation in expression of key environmentally sensitive traits, and associated variation in fitness components occurring within and between years, determine the extents of phenotypic plasticity and selection and shape population responses to changing environments. Reversible seasonal migration is one key trait that directly mediates spatial escape from seasonally deteriorating environments, causing spatio-seasonal population dynamics. Yet, within-individual and among-individual variation in seasonal migration versus residence, and dynamic associations with subsequent reproductive success, have not been fully quantified. We used novel capture-mark-recapture mixture models to assign individual European shags (Phalacrocorax aristotelis) to 'resident', 'early migrant', or 'late migrant' strategies in two consecutive years, using year-round local resightings. We demonstrate substantial among-individual variation in strategy within years, and directional within-individual change between years. Furthermore, subsequent reproductive success varied substantially among strategies, and relationships differed between years; residents and late migrants had highest success in the 2 years, respectively, matching the years in which these strategies were most frequently expressed. These results imply that migratory strategies can experience fluctuating reproductive selection, and that flexible expression of migration can be partially aligned with reproductive outcomes. Plastic seasonal migration could then potentially contribute to adaptive population responses to currently changing forms of environmental seasonality.
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Affiliation(s)
- Jane M. Reid
- School of Biological Sciences, University of Aberdeen, Aberdeen AB24 2TZ, Scotland
- Centre for Biodiversity Dynamics, Institutt for Biologi, NTNU, Trondheim, Norway
| | | | - Sarah R. Fenn
- School of Biological Sciences, University of Aberdeen, Aberdeen AB24 2TZ, Scotland
| | - Paul Acker
- School of Biological Sciences, University of Aberdeen, Aberdeen AB24 2TZ, Scotland
| | - Ana Payo-Payo
- School of Biological Sciences, University of Aberdeen, Aberdeen AB24 2TZ, Scotland
| | - Sarah J. Burthe
- UK Centre for Ecology & Hydrology, Edinburgh EH26 0QB, Scotland
| | - Sarah Wanless
- UK Centre for Ecology & Hydrology, Edinburgh EH26 0QB, Scotland
| | - Francis Daunt
- UK Centre for Ecology & Hydrology, Edinburgh EH26 0QB, Scotland
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78
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Magnoli SM, Lau JA. Evolution in novel environments: Do restored prairie populations experience strong selection? Ecology 2020; 101:e03120. [PMID: 32535882 DOI: 10.1002/ecy.3120] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 12/15/2019] [Revised: 04/08/2020] [Accepted: 05/06/2020] [Indexed: 12/12/2022]
Abstract
When populations colonize new habitats, they are likely to experience novel environmental conditions, and as a consequence may experience strong selection. While selection and the resulting evolutionary responses may have important implications for establishment success in colonizing populations, few studies have estimated selection in such scenarios. Here we examined evidence of selection in recently established plant populations in two prairie restorations in close proximity (<15 km apart) using two approaches: (1) we tested for evidence of past selection on a suite of traits in two Chamaecrista fasciculata populations by comparing the restored populations to each other and their shared source population in common gardens to quantify evolutionary responses and (2) we measured selection in the field. We found evidence of past selection on flowering time, specific leaf area, and root nodule production in one of the populations, but detected contemporary selection on only one trait (plant height). Our findings demonstrate that while selection can occur in colonizing populations, resulting in significant trait differences between restored populations in fewer than six generations, evolutionary responses differ across even nearby populations sown with the same source population. Because contemporary measures of selection differed from evolutionary responses to past selection, our findings also suggest that selection likely differs over the early stages of succession that characterize young prairies.
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Affiliation(s)
- Susan M Magnoli
- W.K. Kellogg Biological Station, Michigan State University, Hickory Corners, Michigan, 49060.,Department of Plant Biology, Michigan State University, East Lansing, Michigan, 48823
| | - Jennifer A Lau
- Department of Biology, Indiana University, Bloomington, Indiana
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79
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Evolutionary origins of genomic adaptations in an invasive copepod. Nat Ecol Evol 2020; 4:1084-1094. [DOI: 10.1038/s41559-020-1201-y] [Citation(s) in RCA: 35] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/27/2019] [Accepted: 04/14/2020] [Indexed: 12/18/2022]
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80
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Pettersen AK, Hall MD, White CR, Marshall DJ. Metabolic rate, context-dependent selection, and the competition-colonization trade-off. Evol Lett 2020; 4:333-344. [PMID: 32774882 PMCID: PMC7403701 DOI: 10.1002/evl3.174] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/06/2020] [Revised: 04/08/2020] [Accepted: 04/20/2020] [Indexed: 01/24/2023] Open
Abstract
Metabolism is linked with the pace‐of‐life, co‐varying with survival, growth, and reproduction. Metabolic rates should therefore be under strong selection and, if heritable, become less variable over time. Yet intraspecific variation in metabolic rates is ubiquitous, even after accounting for body mass and temperature. Theory predicts variable selection maintains trait variation, but field estimates of how selection on metabolism varies are rare. We use a model marine invertebrate to estimate selection on metabolic rates in the wild under different competitive environments. Fitness landscapes varied among environments separated by a few centimeters: interspecific competition selected for higher metabolism, and a faster pace‐of‐life, relative to competition‐free environments. Populations experience a mosaic of competitive regimes; we find metabolism mediates a competition‐colonization trade‐off across these regimes. Although high metabolic phenotypes possess greater competitive ability, in the absence of competitors, low metabolic phenotypes are better colonizers. Spatial heterogeneity and the variable selection on metabolic rates that it generates is likely to maintain variation in metabolic rate, despite strong selection in any single environment.
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Affiliation(s)
- Amanda K Pettersen
- School of Biological Sciences/Centre for Geometric Biology Monash University Melbourne VIC 3800 Australia.,Department of Biology Lund University Lund 221 00 Sweden
| | - Matthew D Hall
- School of Biological Sciences/Centre for Geometric Biology Monash University Melbourne VIC 3800 Australia
| | - Craig R White
- School of Biological Sciences/Centre for Geometric Biology Monash University Melbourne VIC 3800 Australia
| | - Dustin J Marshall
- School of Biological Sciences/Centre for Geometric Biology Monash University Melbourne VIC 3800 Australia
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81
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Rogers TL, Munch SB, Stewart SD, Palkovacs EP, Giron-Nava A, Matsuzaki SIS, Symons CC. Trophic control changes with season and nutrient loading in lakes. Ecol Lett 2020; 23:1287-1297. [PMID: 32476249 PMCID: PMC7384198 DOI: 10.1111/ele.13532] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2020] [Revised: 04/01/2020] [Accepted: 04/17/2020] [Indexed: 11/29/2022]
Abstract
Experiments have revealed much about top‐down and bottom‐up control in ecosystems, but manipulative experiments are limited in spatial and temporal scale. To obtain a more nuanced understanding of trophic control over large scales, we explored long‐term time‐series data from 13 globally distributed lakes and used empirical dynamic modelling to quantify interaction strengths between zooplankton and phytoplankton over time within and across lakes. Across all lakes, top‐down effects were associated with nutrients, switching from negative in mesotrophic lakes to positive in oligotrophic lakes. This result suggests that zooplankton nutrient recycling exceeds grazing pressure in nutrient‐limited systems. Within individual lakes, results were consistent with a ‘seasonal reset’ hypothesis in which top‐down and bottom‐up interactions varied seasonally and were both strongest at the beginning of the growing season. Thus, trophic control is not static, but varies with abiotic conditions – dynamics that only become evident when observing changes over large spatial and temporal scales.
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Affiliation(s)
- Tanya L Rogers
- Southwest Fisheries Science Center, National Marine Fisheries Service, National Oceanic and Atmospheric Administration, Santa Cruz, CA, 95060, USA
| | - Stephan B Munch
- Southwest Fisheries Science Center, National Marine Fisheries Service, National Oceanic and Atmospheric Administration, Santa Cruz, CA, 95060, USA
| | | | - Eric P Palkovacs
- Department of Ecology and Evolutionary Biology, University of California, Santa Cruz, Santa Cruz, CA, 95060, USA
| | - Alfredo Giron-Nava
- National Center for Ecological Analysis and Synthesis, University of California, Santa Barbara, Santa Barbara, CA, 93101, USA
| | - Shin-Ichiro S Matsuzaki
- Center for Environmental Biology and Ecosystem Studies, National Institute for Environmental Studies, 16-2 Onogawa, Tsukuba, Ibaraki, 305-8506, Japan
| | - Celia C Symons
- Department of Ecology and Evolutionary Biology, University of California, Santa Cruz, Santa Cruz, CA, 95060, USA.,Department of Ecology and Evolutionary Biology, University of California, Irvine, Irvine, CA, 92697, USA
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82
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Ochoa-López S, Damián X, Rebollo R, Fornoni J, Domínguez CA, Boege K. Ontogenetic changes in the targets of natural selection in three plant defenses. THE NEW PHYTOLOGIST 2020; 226:1480-1491. [PMID: 31943211 DOI: 10.1111/nph.16422] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/30/2019] [Accepted: 12/30/2019] [Indexed: 06/10/2023]
Abstract
The evolution of plant defenses has traditionally been studied at single plant ontogenetic stages, overlooking the fact that natural selection acts continuously on organisms along their development, and that the adaptive value of phenotypes can change along ontogeny. We exposed 20 replicated genotypes of Turnera velutina to field conditions to evaluate whether the targets of natural selection on different defenses and their adaptative value change across plant development. We found that low chemical defense was favored in seedlings, which seems to be explained by the assimilation efficiency and the ability of the specialist herbivore to sequester cyanogenic glycosides. Whereas trichome density was unfavored in juvenile plants, it increased relative plant fitness in reproductive plants. At this stage we also found a positive correlative gradient between cyanogenic potential and sugar content in extrafloral nectar. We visualize this complex multi-trait combination as an ontogenetic defensive strategy. The inclusion of whole-plant ontogeny as a key source of variation in plant defense revealed that the targets and intensity of selection change along the development of plants, indicating that the influence of natural selection cannot be inferred without the assessment of ontogenetic strategies in the expression of multiple defenses.
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Affiliation(s)
- Sofía Ochoa-López
- Instituto de Ecología, Universidad Nacional Autónoma de México, Apartado Postal 70-275, Ciudad Universitaria, CP 04510, Ciudad de México, México
- Posgrado en Ciencias Biológicas, Unidad de Posgrado, Edificio A, 1° Piso, Circuito de Posgrados, Ciudad Universitaria, Coyoacán, CP 04510, Ciudad de México, México
| | - Xóchitl Damián
- Instituto de Ecología, Universidad Nacional Autónoma de México, Apartado Postal 70-275, Ciudad Universitaria, CP 04510, Ciudad de México, México
- Posgrado en Ciencias Biológicas, Unidad de Posgrado, Edificio A, 1° Piso, Circuito de Posgrados, Ciudad Universitaria, Coyoacán, CP 04510, Ciudad de México, México
| | - Roberto Rebollo
- Instituto de Ecología, Universidad Nacional Autónoma de México, Apartado Postal 70-275, Ciudad Universitaria, CP 04510, Ciudad de México, México
| | - Juan Fornoni
- Instituto de Ecología, Universidad Nacional Autónoma de México, Apartado Postal 70-275, Ciudad Universitaria, CP 04510, Ciudad de México, México
| | - César A Domínguez
- Instituto de Ecología, Universidad Nacional Autónoma de México, Apartado Postal 70-275, Ciudad Universitaria, CP 04510, Ciudad de México, México
| | - Karina Boege
- Instituto de Ecología, Universidad Nacional Autónoma de México, Apartado Postal 70-275, Ciudad Universitaria, CP 04510, Ciudad de México, México
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83
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Predictors of colony extinction vary by habitat type in social spiders. Behav Ecol Sociobiol 2020; 74. [PMID: 32431472 DOI: 10.1007/s00265-019-2781-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
Abstract
Many animal societies are susceptible to mass mortality events and collapse. Elucidating how environmental pressures determine patterns of collapse is important for understanding how such societies function and evolve. Using the social spider Stegodyphus dumicola, we investigated the environmental drivers of colony extinction along two precipitation gradients across southern Africa, using the Namib and Kalahari deserts versus wetter savanna habitats to the north and east. We deployed experimental colonies (n = 242) along two ~ 800-km transects and returned to assess colony success in the field after 2 months. Specifically, we noted colony extinction events after the 2-month duration and collected environmental data on the correlates of those extinction events (e.g., evidence of ant attacks, no. of prey captured). We found that colony extinction events at desert sites were more frequently associated with attacks by predatory ants as compared with savanna sites, while colony extinctions in wetter savannas sites were more tightly associated with fungal outbreaks. Our findings support the hypothesis that environments vary in the selection pressures that they impose on social organisms, which may explain why different social phenotypes are often favored in each habitat.
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84
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Skaien CL, Arcese P. Local adaptation in island populations of Plectritis congesta that differ in historic exposure to ungulate browsers. Ecology 2020; 101:e03054. [PMID: 32239504 DOI: 10.1002/ecy.3054] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 09/19/2019] [Revised: 02/07/2020] [Accepted: 02/24/2020] [Indexed: 11/07/2022]
Abstract
Spatial variation in the occurrence of browsing ungulates can drive local adaptation in plant traits but also lead to trade-offs among traits potentially enhancing competitive ability versus resistance or tolerance to browsing. Plectritis congesta populations co-occurring on islands with and without ungulates offer striking examples of population-level variation in traits, such as plant height and fruit morphology, which may also affect fitness. We monitored split-plot common gardens exposed to and protected from browsing ungulates for 5 yr to test for local adaptation (local vs. foreign comparison) in P. congesta by comparing the survival and fecundity of 4,392 sown fruits from six island populations where ungulates were present ("historically exposed") and six where they were absent ("historically naïve"). Our results indicate that local adaptation to browsing in P. congesta favored rosette formation, delayed flowering, reduced height, and the production of wingless fruits, all of which appeared to enhance survival, fecundity, and population growth in plants from populations historically exposed to ungulate browsers, as compared to plants from historically naïve populations. In contrast, plants from historically naïve populations displayed higher relative fitness in the absence of ungulates, increased in height, flowered earlier, and produced fewer but larger, winged fruits, often in large terminal inflorescences. Our results support the hypothesis that variation in the occurrence of ungulate browsers has led to (1) spatial heterogeneity in natural selection and rapid adaptation in P. congesta populations on islands, and (2) context-dependent trade-offs in the fitness value of traits linked to the resistance or tolerance of browsing versus success in competition for light, pollinators, or other resources. Because patterns of selection in plant communities will vary with the introduction or extirpation of top predators or browsers, we suggest historical context, local adaptation, and the capacity for rapid adaptation should be a focal concern of those aiming to maximize or predict population persistence under environmental change in conservation plans.
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Affiliation(s)
- Cora L Skaien
- Department of Forest and Conservation Sciences, Faculty of Forestry, University of British Columbia, 2424 Main Mall, Vancouver, British Columbia, V6T 1Z4, Canada
| | - Peter Arcese
- Department of Forest and Conservation Sciences, Faculty of Forestry, University of British Columbia, 2424 Main Mall, Vancouver, British Columbia, V6T 1Z4, Canada
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85
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Gobbin TP, Vanhove MPM, Pariselle A, Groothuis TGG, Maan ME, Seehausen O. Temporally consistent species differences in parasite infection but no evidence for rapid parasite-mediated speciation in Lake Victoria cichlid fish. J Evol Biol 2020; 33:556-575. [PMID: 32163649 PMCID: PMC7318199 DOI: 10.1111/jeb.13615] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2019] [Revised: 02/17/2020] [Accepted: 03/04/2020] [Indexed: 12/31/2022]
Abstract
Parasites may have strong eco‐evolutionary interactions with their hosts. Consequently, they may contribute to host diversification. The radiation of cichlid fish in Lake Victoria provides a good model to study the role of parasites in the early stages of speciation. We investigated patterns of macroparasite infection in a community of 17 sympatric cichlids from a recent radiation and 2 older species from 2 nonradiating lineages, to explore the opportunity for parasite‐mediated speciation. Host species had different parasite infection profiles, which were only partially explained by ecological factors (diet, water depth). This may indicate that differences in infection are not simply the result of differences in exposure, but that hosts evolved species‐specific resistance, consistent with parasite‐mediated divergent selection. Infection was similar between sampling years, indicating that the direction of parasite‐mediated selection is stable through time. We morphologically identified 6 Cichlidogyrus species, a gill parasite that is considered a good candidate for driving parasite‐mediated speciation, because it is host species‐specific and has radiated elsewhere in Africa. Species composition of Cichlidogyrus infection was similar among the most closely related host species (members of the Lake Victoria radiation), but two more distantly related species (belonging to nonradiating sister lineages) showed distinct infection profiles. This is inconsistent with a role for Cichlidogyrus in the early stages of divergence. To conclude, we find significant interspecific variation in parasite infection profiles, which is temporally consistent. We found no evidence that Cichlidogyrus‐mediated selection contributes to the early stages of speciation. Instead, our findings indicate that species differences in infection accumulate after speciation.
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Affiliation(s)
- Tiziana P Gobbin
- Division of Aquatic Ecology & Evolution, Institute of Ecology and Evolution, University of Bern, Bern, Switzerland.,Groningen Institute for Evolutionary Life Sciences, University of Groningen, Groningen, the Netherlands.,Department of Fish Ecology and Evolution, Centre of Ecology, Evolution and Biogeochemistry, Eawag, Swiss Federal Institute of Aquatic Science and Technology, Kastanienbaum, Switzerland
| | - Maarten P M Vanhove
- Research Group Zoology: Biodiversity & Toxicology, Centre for Environmental Sciences, Hasselt University, Diepenbeek, Belgium.,Department of Biology, Laboratory of Biodiversity and Evolutionary Genomics, University of Leuven, Leuven, Belgium.,Department of Botany and Zoology, Faculty of Science, Masaryk University, Brno, Czech Republic.,Zoology Unit, Finnish Museum of Natural History, University of Helsinki, Helsinki, Finland
| | - Antoine Pariselle
- ISEM, CNRS, Université de Montpellier, IRD, Montpellier, France.,Faculty of Sciences, Laboratory of Biodiversity, Ecology and Genome, Mohammed V University in Rabat, Rabat, Morocco
| | - Ton G G Groothuis
- Department of Fish Ecology and Evolution, Centre of Ecology, Evolution and Biogeochemistry, Eawag, Swiss Federal Institute of Aquatic Science and Technology, Kastanienbaum, Switzerland
| | - Martine E Maan
- Department of Fish Ecology and Evolution, Centre of Ecology, Evolution and Biogeochemistry, Eawag, Swiss Federal Institute of Aquatic Science and Technology, Kastanienbaum, Switzerland
| | - Ole Seehausen
- Division of Aquatic Ecology & Evolution, Institute of Ecology and Evolution, University of Bern, Bern, Switzerland.,Groningen Institute for Evolutionary Life Sciences, University of Groningen, Groningen, the Netherlands
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86
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Jin H, Yuan Y, Gao F, Oduor AMO, Li J. The invasive plant Solidago canadensis exhibits partial local adaptation to low salinity at germination but not at later life-history stages. AMERICAN JOURNAL OF BOTANY 2020; 107:599-606. [PMID: 32227339 DOI: 10.1002/ajb2.1456] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/04/2019] [Accepted: 01/23/2020] [Indexed: 06/10/2023]
Abstract
PREMISE Evolutionary adaptation may enable plants to inhabit a broad range of environments. However, germination and early life-history stages have seldom been considered in estimates of evolutionary adaptation. Moreover, whether soil microbial communities can influence evolutionary adaptation in plants remains little explored. METHODS We used reciprocal transplant experiments to investigate whether two populations of an invasive plant Solidago canadensis that occur in contrasting habitats of low versus high salinity expressed adaptation to the respective salinity levels. We germinated S. canadensis seeds collected from low-and high-salinity habitats under low- and high-salt treatments. We also raised S. canadensis seedlings from the two salinity habitats under low- and high-salt treatments and in the presence versus absence of microbial communities from the two habitats. RESULTS Genotypes from a low-salinity habitat had higher germination rates under low-salt treatment than genotypes from a high-salinity habitat. However, both genotypes had similar germination rates under a high-salt treatment. The two genotypes also had similar seedling survival and biomass responses to low- and high-salt treatments. Nevertheless, seedling biomass was significantly higher under low salt treatment. Soil microbial communities did not influence biomass of S. canadensis under the two salt treatments. CONCLUSIONS The results on germination rates suggest partial local adaptation to low salinity. However, there was no evidence of local adaptation to salinity at the seedling survival and growth stages. The finding that germination and seedling biomass responded to different salt treatments suggests that the two traits are important for salt tolerance.
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Affiliation(s)
- Huifei Jin
- School of Life Science, Shanghai Normal University, Shanghai, 200234, China
- Zhejiang Provincial Key Laboratory of Plant Evolutionary Ecology and Conservation, Taizhou University, Taizhou, 318000, China
| | - Yongge Yuan
- Zhejiang Provincial Key Laboratory of Plant Evolutionary Ecology and Conservation, Taizhou University, Taizhou, 318000, China
| | - Fanglei Gao
- Zhejiang Provincial Key Laboratory of Plant Evolutionary Ecology and Conservation, Taizhou University, Taizhou, 318000, China
- School of Nature Conservation, Beijing Forestry University, Beijing, 100083, China
| | - Ayub M O Oduor
- Zhejiang Provincial Key Laboratory of Plant Evolutionary Ecology and Conservation, Taizhou University, Taizhou, 318000, China
- Department of Applied Biology, Technical University of Kenya, P.O. Box 52428-00200, Nairobi, Kenya
| | - Junmin Li
- Zhejiang Provincial Key Laboratory of Plant Evolutionary Ecology and Conservation, Taizhou University, Taizhou, 318000, China
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87
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Ehrlén J, Valdés A. Climate drives among‐year variation in natural selection on flowering time. Ecol Lett 2020; 23:653-662. [DOI: 10.1111/ele.13468] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/12/2019] [Revised: 12/14/2019] [Accepted: 01/07/2020] [Indexed: 12/19/2022]
Affiliation(s)
- Johan Ehrlén
- Department of Ecology, Environment and Plant Sciences Stockholm University SE‐106 91 Stockholm Sweden
- Bolin Centre of Climate Research Stockholm University Stockholm Sweden
| | - Alicia Valdés
- Department of Ecology, Environment and Plant Sciences Stockholm University SE‐106 91 Stockholm Sweden
- Bolin Centre of Climate Research Stockholm University Stockholm Sweden
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88
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Siepielski AM, Hasik AZ, Ping T, Serrano M, Strayhorn K, Tye SP. Predators weaken prey intraspecific competition through phenotypic selection. Ecol Lett 2020; 23:951-961. [PMID: 32227439 DOI: 10.1111/ele.13491] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/13/2020] [Revised: 02/12/2020] [Accepted: 02/19/2020] [Indexed: 12/01/2022]
Abstract
Predators have a key role shaping competitor dynamics in food webs. Perhaps the most obvious way this occurs is when predators reduce competitor densities. However, consumption could also generate phenotypic selection on prey that determines the strength of competition, thus coupling consumptive and trait-based effects of predators. In a mesocosm experiment simulating fish predation on damselflies, we found that selection against high damselfly activity rates - a phenotype mediating predation and competition - weakened the strength of density dependence in damselfly growth rates. A field experiment corroborated this finding and showed that increasing damselfly densities in lakes with high fish densities had limited effects on damselfly growth rates but generated a precipitous growth rate decline where fish densities were lower - a pattern expected because of spatial variation in selection imposed by predation. These results suggest that accounting for both consumption and selection is necessary to determine how predators regulate prey competitive interactions.
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Affiliation(s)
- Adam M Siepielski
- Department of Biological Sciences, University of Arkansas, Fayetteville, AR, 72701, USA
| | - Adam Z Hasik
- Department of Biological Sciences, University of Arkansas, Fayetteville, AR, 72701, USA
| | - Taylor Ping
- Department of Biological Sciences, University of Arkansas, Fayetteville, AR, 72701, USA
| | - Mabel Serrano
- Department of Biological Sciences, University of Arkansas, Fayetteville, AR, 72701, USA
| | - Koby Strayhorn
- Department of Biological Sciences, University of Arkansas, Fayetteville, AR, 72701, USA
| | - Simon P Tye
- Department of Biological Sciences, University of Arkansas, Fayetteville, AR, 72701, USA
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89
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Ives AR, Barton BT, Penczykowski RM, Harmon JP, Kim KL, Oliver K, Radeloff VC. Self-perpetuating ecological–evolutionary dynamics in an agricultural host–parasite system. Nat Ecol Evol 2020; 4:702-711. [DOI: 10.1038/s41559-020-1155-0] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2019] [Accepted: 02/21/2020] [Indexed: 12/20/2022]
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90
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Abstract
Migratory behaviour is rapidly changing in response to recent environmental changes, yet it is difficult to predict how migration will evolve in the future. To understand what determines the rate of adaptive evolutionary change in migratory behaviour, we simulated the evolution of residency using an individual-based threshold model, which allows for variation in selection, number of genes, environmental effects and assortative mating. Our model indicates that the recent reduction in migratory activity found in a population of Eurasian blackcaps (Sylvia atricapilla) is only compatible with this trait being under strong directional selection, in which residents have the highest fitness and fitness declines exponentially with migration distance. All other factors had minor effects on the adaptive response. Under this form of selection, a completely migratory population will become partially migratory in 6 and completely resident in 98 generations, demonstrating the persistence of partial migration, even under strong directional selection. Resident populations will preserve large amounts of cryptic genetic variation, particularly if migration is controlled by a large number of genes with small effects. This model can be used to realistically simulate the evolution of any threshold trait, including semi-continuous traits like migration, for predicting evolutionary response to natural selection in the wild.
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Affiliation(s)
- Tiago de Zoeten
- Department of Biodiversity, Ecology and Evolution, Complutense University of Madrid, 28040 Madrid, Spain
| | - Francisco Pulido
- Department of Biodiversity, Ecology and Evolution, Complutense University of Madrid, 28040 Madrid, Spain
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91
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Houle C, Pelletier F, Bélisle M, Garant D. Impacts of environmental heterogeneity on natural selection in a wild bird population*. Evolution 2020; 74:1142-1154. [DOI: 10.1111/evo.13939] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/07/2019] [Revised: 01/22/2020] [Accepted: 01/26/2020] [Indexed: 01/20/2023]
Affiliation(s)
- Carolyne Houle
- Département de biologieUniversité de Sherbrooke 2500 boulevard de l'Université Sherbrooke Quebec Canada J1K 2R1
| | - Fanie Pelletier
- Département de biologieUniversité de Sherbrooke 2500 boulevard de l'Université Sherbrooke Quebec Canada J1K 2R1
| | - Marc Bélisle
- Département de biologieUniversité de Sherbrooke 2500 boulevard de l'Université Sherbrooke Quebec Canada J1K 2R1
| | - Dany Garant
- Département de biologieUniversité de Sherbrooke 2500 boulevard de l'Université Sherbrooke Quebec Canada J1K 2R1
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Murren CJ, Alt CHS, Kohler C, Sancho G. Natural variation on whole-plant form in the wild is influenced by multivariate soil nutrient characteristics: natural selection acts on root traits. AMERICAN JOURNAL OF BOTANY 2020; 107:319-328. [PMID: 32002983 DOI: 10.1002/ajb2.1420] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/07/2019] [Accepted: 09/23/2019] [Indexed: 05/22/2023]
Abstract
PREMISE In the complex soil nutrient environments of wild populations of annual plants, in general, low nutrient availability restricts growth and alters root-shoot relationships. However, our knowledge of natural selection on roots in field settings is limited. We sought to determine whether selection acts directly on root traits and to identify which components of the soil environment were potential agents of selection. METHODS We studied wild native populations of Arabidopsis thaliana across 4 years, measuring aboveground and belowground traits and analyzing soil nutrients. Using multivariate methods, we examined patterns of natural selection and identified soil attributes that contributed to whole-plant form. In a common garden experiment at two field sites with contrasting soil texture, we examined patterns of selection on root and shoot traits. RESULTS In wild populations, we uncovered selection for above- and belowground size and architectural traits. We detected variation through time and identified soil components that influenced fruit production. In the garden experiment, we detected a distinct positive selection for total root length at the site with greater water-holding capacity and negative selection for measures of root architecture at the field site with reduced nutrient availability and water holding capacity. CONCLUSIONS Patterns of natural selection on belowground traits varied through time, across field sites and experimental gardens. Simultaneous investigations of above- and belowground traits reveal trait functional relationships on which natural selection can act, highlighting the influence of edaphic features on evolutionary processes in wild annual plant populations.
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Affiliation(s)
- Courtney J Murren
- Department of Biology, College of Charleston, Charleston, SC, 29424, USA
| | - Claudia H S Alt
- Department of Biology, College of Charleston, Charleston, SC, 29424, USA
- Department of Earth Sciences, University of Bristol, Bristol, UK
| | - Clare Kohler
- Department of Biology, College of Charleston, Charleston, SC, 29424, USA
- Environmental Sciences Initiative, CUNY ASRC, New York, NY, 10031, USA
| | - Gorka Sancho
- Department of Biology, College of Charleston, Charleston, SC, 29424, USA
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93
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Moest M, Van Belleghem SM, James JE, Salazar C, Martin SH, Barker SL, Moreira GRP, Mérot C, Joron M, Nadeau NJ, Steiner FM, Jiggins CD. Selective sweeps on novel and introgressed variation shape mimicry loci in a butterfly adaptive radiation. PLoS Biol 2020; 18:e3000597. [PMID: 32027643 PMCID: PMC7029882 DOI: 10.1371/journal.pbio.3000597] [Citation(s) in RCA: 38] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/03/2019] [Revised: 02/19/2020] [Accepted: 01/15/2020] [Indexed: 11/21/2022] Open
Abstract
Natural selection leaves distinct signatures in the genome that can reveal the targets and history of adaptive evolution. By analysing high-coverage genome sequence data from 4 major colour pattern loci sampled from nearly 600 individuals in 53 populations, we show pervasive selection on wing patterns in the Heliconius adaptive radiation. The strongest signatures correspond to loci with the greatest phenotypic effects, consistent with visual selection by predators, and are found in colour patterns with geographically restricted distributions. These recent sweeps are similar between co-mimics and indicate colour pattern turn-over events despite strong stabilising selection. Using simulations, we compare sweep signatures expected under classic hard sweeps with those resulting from adaptive introgression, an important aspect of mimicry evolution in Heliconius butterflies. Simulated recipient populations show a distinct 'volcano' pattern with peaks of increased genetic diversity around the selected target, characteristic of sweeps of introgressed variation and consistent with diversity patterns found in some populations. Our genomic data reveal a surprisingly dynamic history of colour pattern selection and co-evolution in this adaptive radiation.
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Affiliation(s)
- Markus Moest
- Department of Zoology, University of Cambridge, Cambridge, United Kingdom
- Department of Ecology, University of Innsbruck, Innsbruck, Austria
| | - Steven M. Van Belleghem
- Department of Zoology, University of Cambridge, Cambridge, United Kingdom
- Department of Biology, University of Puerto Rico, Rio Piedras, Puerto Rico
| | - Jennifer E. James
- Department of Zoology, University of Cambridge, Cambridge, United Kingdom
- Department of Ecology and Evolutionary Biology, University of Arizona, Tucson, Arizona, United States of America
| | - Camilo Salazar
- Biology Program, Faculty of Natural Sciences and Mathematics, Universidad del Rosario, Bogota D.C., Colombia
| | - Simon H. Martin
- Department of Zoology, University of Cambridge, Cambridge, United Kingdom
- Institute of Evolutionary Biology, University of Edinburgh, Edinburgh, United Kingdom
| | - Sarah L. Barker
- Department of Zoology, University of Cambridge, Cambridge, United Kingdom
| | - Gilson R. P. Moreira
- Departamento de Zoologia, Universidade Federal do Rio Grande do Sul, Porto Alegre, Brazil
| | - Claire Mérot
- IBIS, Department of Biology, Université Laval, Québec, Canada
| | - Mathieu Joron
- Centre d'Ecologie Fonctionnelle et Evolutive, UMR 5175 CNRS—Université de Montpellier—Université Paul Valéry Montpellier—EPHE, Montpellier, France
| | - Nicola J. Nadeau
- Department of Animal and Plant Sciences, University of Sheffield, Sheffield, United Kingdom
| | | | - Chris D. Jiggins
- Department of Zoology, University of Cambridge, Cambridge, United Kingdom
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94
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Tackling Regional Climate Change Impacts and Food Security Issues: A Critical Analysis across ASEAN, PIF, and SAARC. SUSTAINABILITY 2020. [DOI: 10.3390/su12030883] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
Climate change and food security issues are multi-faceted and transcend across national boundaries. Therefore, this paper begins with the premise that regional organizations are optimally positioned to address climate change and food security issues while actively engaging global partners to slow down or reverse current trajectories. However, the potential of regional organizations to play a central role in mitigating these vital concerns has not been realized. In this paper, we focus on three regional organizations—the Association of Southeast Asian Nations (ASEAN), the Pacific Islands Forum (PIF), and the South Asian Association for Regional Cooperation (SAARC) and set out to investigate the multifaceted obstacles that impede regional organizations’ ability to effectively cope with these problems. We qualitatively review the efficacy of policies and examine the connections between politico-economic processes that affect the development, cooperation, and execution of regional policies. In doing so, we review regional policies using five key criteria: (i) planning, (ii) implementation, (iii) cooperation, (iv) legal obligation and (v) international contribution. Our findings suggest that regional organizations face fundamental problems in the implementation of extensive policies due to the lack of cooperation and legal obligation between member nation-states that stems from fundamental prioritization of national development agendas over regional cooperation.
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95
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Trunschke J, Sletvold N, Ågren J. Manipulation of trait expression and pollination regime reveals the adaptive significance of spur length. Evolution 2020; 74:597-609. [PMID: 31944284 DOI: 10.1111/evo.13927] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/13/2019] [Revised: 12/21/2019] [Accepted: 01/07/2020] [Indexed: 12/13/2022]
Abstract
Understanding the mechanisms of adaptive population differentiation requires that both the functional and adaptive significance of divergent traits are characterized in contrasting environments. Here, we (a) determined the effects of floral spur length on pollen removal and receipt using plants with artificial spurs representing the species-wide variation in length, and (b) quantified pollinator-mediated selection on spur length and three traits contributing to floral display in two populations each of the short-spurred and the long-spurred ecotype of the orchid Platanthera bifolia. Both pollen receipt and removal reached a maximum at 28-29 mm long spurs in a short-spurred population visited by short-tongued moths. In contrast, pollen receipt increased linearly across the tested range (4-52 mm) and pollen removal was unrelated to spur length in a long-spurred population predominantly visited by a long-tongued moth. The experimentally documented effects on pollen transfer were not reflected in pollinator-mediated selection through female fitness or pollen removal indicating that the natural within-population variation in spur length was insufficient to result in detectable variation in pollen limitation. Our study illustrates how combining trait manipulation with analysis of causes and strength of phenotypic selection can illuminate the functional and adaptive significance of trait expression when trait variation is limited.
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Affiliation(s)
- Judith Trunschke
- Plant Ecology and Evolution, Department of Ecology and Genetics, EBC, Uppsala University, SE-752 36, Uppsala, Sweden.,Current Address: Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201, P. R. China
| | - Nina Sletvold
- Plant Ecology and Evolution, Department of Ecology and Genetics, EBC, Uppsala University, SE-752 36, Uppsala, Sweden
| | - Jon Ågren
- Plant Ecology and Evolution, Department of Ecology and Genetics, EBC, Uppsala University, SE-752 36, Uppsala, Sweden
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96
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Clark AD, Deffner D, Laland K, Odling-Smee J, Endler J. Niche Construction Affects the Variability and Strength of Natural Selection. Am Nat 2020; 195:16-30. [DOI: 10.1086/706196] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/04/2022]
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97
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Brunet J, Flick AJ, Bauer AA. Phenotypic Selection on Flower Color and Floral Display Size by Three Bee Species. FRONTIERS IN PLANT SCIENCE 2020; 11:587528. [PMID: 33519846 PMCID: PMC7840534 DOI: 10.3389/fpls.2020.587528] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/26/2020] [Accepted: 12/21/2020] [Indexed: 05/14/2023]
Abstract
Plants exhibit a wide array of floral forms and pollinators can act as agent of selection on floral traits. Two trends have emerged from recent reviews of pollinator-mediated selection in plants. First, pollinator-mediated selection on plant-level attractants such as floral display size is stronger than on flower-level attractant such as flower color. Second, when comparing plant species, distinct pollinators can exert different selection patterns on floral traits. In addition, many plant species are visited by a diverse array of pollinators but very few studies have examined selection by distinct pollinators. In the current study, we examined phenotypic selection on flower color and floral display size by three distinct bee species, the European honey bee, Apis mellifera, the common eastern bumble bee, Bombus impatiens, and the alfalfa leafcutting bee, Megachile rotundata, foraging on Medicago sativa. To estimate phenotypic selection by each bee species and for all bees combined simultaneously and on the same group of plants, we introduce a new method that combines pollinator visitation data to seed set and floral trait measurements data typical of phenotypic selection study. When comparing floral traits, all bee species selected on the number of racemes per stem and the number of stems per plant, two components of floral display size. However, only leafcutting bees selected on hue or flower color and only bumble bees selected on chroma or darkness of flowers. Selection on chroma occurred via correlational selection between chroma and number of open flowers per raceme and we examine how correlational selection may facilitate the evolution of flower color in plant populations. When comparing bee species, the three bee species exerted similar selection pattern on some floral traits but different patterns on other floral traits and differences in selection patterns were observed between flower-level and plant-level attractants. The trends detected were consistent with previous studies and we advocate the approach introduced here for future studies examining the impact of distinct pollinators on floral trait evolution.
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Affiliation(s)
- Johanne Brunet
- United States Department of Agriculture, Agricultural Research Service, Madison, WI, United States
- *Correspondence: Johanne Brunet,
| | - Andrew J. Flick
- Agricultural Research Service Research Participation Program – Oak Ridge Institute for Science and Education, Madison, WI, United States
| | - Austin A. Bauer
- Department of Entomology, University of Wisconsin, Madison, WI, United States
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98
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Liu Y, El-Kassaby YA. Phenotypic plasticity of natural Populus trichocarpa populations in response to temporally environmental change in a common garden. BMC Evol Biol 2019; 19:231. [PMID: 31878866 PMCID: PMC6933736 DOI: 10.1186/s12862-019-1553-6] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/11/2019] [Accepted: 12/05/2019] [Indexed: 11/17/2022] Open
Abstract
BACKGROUND Natural selection on fitness-related traits can be temporally heterogeneous among populations. As climate changes, understanding population-level responses is of scientific and practical importance. We examined 18 phenotypic traits associated with phenology, biomass, and ecophysiology in 403 individuals of natural Populus trichocarpa populations, growing in a common garden. RESULTS Compared with tree origin settings, propagules likely underwent drought exposures in the common garden due to significantly low rainfall during the years of measurement. All study traits showed population differentiation reflecting adaptive responses due to local genetic adaptation. Phenology and biomass traits were strongly under selection and showed plastic responses between years, co-varying with latitude. While phenological events (e.g., bud set and growth period) and biomass were under positive directional selection, post-bud set period, particularly from final bud set to the onset of leaf drop, was selected against. With one exception to water-use efficiency, ecophysiology traits were under negative directional selection. Moreover, extended phenological events jointly evolved with source niches under increased temperature and decreased rainfall exposures. High biomass coevolved with climatic niches of high temperature; low rainfall promoted high photosynthetic rates evolution. CONCLUSIONS This work underpins that P. trichocarpa is likely to experience increased fitness (height gain) by evolving toward extended bud set and growth period, abbreviated post-bud set period, and increased drought resistance, potentially constituting a powerful mechanism for long-lived tree species in surviving unpredictably environmental extremes (e.g., drought).
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Affiliation(s)
- Yang Liu
- Department of Forest and Conservation Sciences, The University of British Columbia, 2424 Main Mall, Vancouver, British Columbia, V6T 1Z4, Canada.
| | - Yousry A El-Kassaby
- Department of Forest and Conservation Sciences, The University of British Columbia, 2424 Main Mall, Vancouver, British Columbia, V6T 1Z4, Canada
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99
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Beausoleil MO, Frishkoff LO, M'Gonigle LK, Raeymaekers JAM, Knutie SA, De León LF, Huber SK, Chaves JA, Clayton DH, Koop JAH, Podos J, Sharpe DMT, Hendry AP, Barrett RDH. Temporally varying disruptive selection in the medium ground finch ( Geospiza fortis). Proc Biol Sci 2019; 286:20192290. [PMID: 31795872 DOI: 10.1098/rspb.2019.2290] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
Disruptive natural selection within populations exploiting different resources is considered to be a major driver of adaptive radiation and the production of biodiversity. Fitness functions, which describe the relationships between trait variation and fitness, can help to illuminate how this disruptive selection leads to population differentiation. However, a single fitness function represents only a particular selection regime over a single specified time period (often a single season or a year), and therefore might not capture longer-term dynamics. Here, we build a series of annual fitness functions that quantify the relationships between phenotype and apparent survival. These functions are based on a 9-year mark-recapture dataset of over 600 medium ground finches (Geospiza fortis) within a population bimodal for beak size. We then relate changes in the shape of these functions to climate variables. We find that disruptive selection between small and large beak morphotypes, as reported previously for 2 years, is present throughout the study period, but that the intensity of this selection varies in association with the harshness of environment. In particular, we find that disruptive selection was strongest when precipitation was high during the dry season of the previous year. Our results shed light on climatic factors associated with disruptive selection in Darwin's finches, and highlight the role of temporally varying fitness functions in modulating the extent of population differentiation.
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Affiliation(s)
- Marc-Olivier Beausoleil
- Department of Biology and Redpath Museum, McGill University, 859 Rue Sherbrooke Ouest, Montréal, Québec, Canada H3A 0C4
| | - Luke O Frishkoff
- Department of Biology, University of Texas at Arlington, Arlington, TX, USA
| | - Leithen K M'Gonigle
- Department of Biological Sciences, Simon Fraser University, Burnaby BC V5A 1S6, Canada
| | | | - Sarah A Knutie
- Department of Ecology and Evolutionary Biology, University of Connecticut, Storrs, CT, USA
| | - Luis F De León
- Department of Biology, University of Massachusetts Boston, Boston, MA, USA.,Centro de Biodiversidad y Descubrimiento de Drogas, Instituto de Investigaciones Científicas y Servicios de Alta Tecnología, Panama
| | - Sarah K Huber
- Virginia Institute of Marine Science, College of William and Mary, Gloucester Point, VA, USA
| | - Jaime A Chaves
- Colegio de Ciencias Biológicas y Ambientales, Universidad San Francisco de Quito, Quito, Pichincha, Ecuador.,Galápagos Science Center, Puerto Baquerizo Moreno, Galápagos, Ecuador
| | - Dale H Clayton
- School of Biological Sciences, University of Utah, 257 South 1400 East, Salt Lake City, 84112 UT, USA
| | - Jennifer A H Koop
- Department of Biological Sciences, Northern Illinois University, 1425 W. Lincoln Hwy., DeKalb, IL 60115, USA
| | - Jeffrey Podos
- Department of Biology, University of Massachusetts, 221 Morrill Science Center, Amherst, MA, USA
| | - Diana M T Sharpe
- Department of Biology, University of Massachusetts Boston, Boston, MA, USA
| | - Andrew P Hendry
- Department of Biology and Redpath Museum, McGill University, 859 Rue Sherbrooke Ouest, Montréal, Québec, Canada H3A 0C4
| | - Rowan D H Barrett
- Department of Biology and Redpath Museum, McGill University, 859 Rue Sherbrooke Ouest, Montréal, Québec, Canada H3A 0C4
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100
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Carvajal‐Endara S, Hendry AP, Emery NC, Neu CP, Carmona D, Gotanda KM, Davies TJ, Chaves JA, Johnson MTJ. The ecology and evolution of seed predation by Darwin's finches onTribulus cistoideson the Galápagos Islands. ECOL MONOGR 2019. [DOI: 10.1002/ecm.1392] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Sofía Carvajal‐Endara
- Department of Biology McGill University 1205 Avenue Docteur Penfield Montréal H3A 1B1 Quebec Canada
| | - Andrew P. Hendry
- Department of Biology McGill University 1205 Avenue Docteur Penfield Montréal H3A 1B1 Quebec Canada
- Redpath Museum McGill University 859 Sherbrooke Street West Montréal H3A 0C4 Quebec Canada
| | - Nancy C. Emery
- Department of Ecology and Evolutionary Biology University of Colorado Boulder Boulder Colorado 80309‐0334 USA
| | - Corey P. Neu
- Department of Mechanical Engineering University of Colorado Boulder Boulder Colorado 80309‐0427 USA
| | - Diego Carmona
- Departamento de Ecología Tropical Campus de Ciencias Biológicas y Agropecuarias Universidad Autónoma de Yucatán Mérida Yucatán México
| | - Kiyoko M. Gotanda
- Department of Zoology University of Cambridge Cambridge CB2 3EJ United Kingdom
| | - T. Jonathan Davies
- Department of Biology McGill University 1205 Avenue Docteur Penfield Montréal H3A 1B1 Quebec Canada
- Biodiversity Research Centre Departments of Botany, Forest and Conservation Sciences University of British Columbia 2212 Main Mall Vancouver V6T 1Z4 British Columbia Canada
| | - Jaime A. Chaves
- Colegio de Ciencias Biológicas y Ambientales ‐ Extensión Galápagos Universidad San Francisco de Quito Campus Cumbayá, Casilla Postal 17‐1200‐841 Quito Ecuador
| | - Marc T. J. Johnson
- Department of Biology University of Toronto Mississauga Mississauga Ontario L5L 1C6 Canada
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