Sources of contamination in sediments of retention tanks and the influence of precipitation type on the size of pollution load

Densification of cities and urban population contributes to increased runoff and suspended solids and alteration of the urban water cycle. Nowadays, Blue-Green Infrastructure is promoted to increase a city's resilience to floods; however, stormwater drainage systems, supported with retention tanks are still important in protecting urban areas against floods. Sediment accumulation in stormwater infrastructure relates to an issue of pollutants such as heavy metals, nutrients etc. Research on the origin of the pollutants associated with the suspension and ultimately sediment accumulated in sewage can bring new insights about processes in urban catchment areas. This is the first study, which is focused on the analysis of stable carbon and nitrogen isotopes in bottom sediments collected from municipal retention tanks to verify the origin of the deposited pollutants immediately after pluvial floods. The research was additionally extended with water quality analyzes immediately after three types of weather: a dry period, typical precipitation (< 30 mm) and torrential rainfalls (2 events with daily precipitation over 30 mm which caused pluvial flooding of the city area). Analyses of sediments indicated that the main source of carbon and nitrogen in the bottom of the retention tanks had been brought with stormwater runoff from the city area. Organic nitrogen fertilizers appeared to be the main source of nitrogen, while the sources of organic carbon were mixed: C3 land plants, wood, and oil. Additionally, it was found that torrential rainfall caused a 23-fold increase of N-NO₃ concentration, a sevenfold increase of P-PO₄ concentration, and an over fivefold increase of concentration of organic matter, in comparison to typical precipitation.

Isotopic turnover in polar cod (Boreogadus saida) muscle determined through a controlled feeding experiment

Polar cod (Boreogadus saida) is an important trophic link within Arctic marine food webs and is likely to experience diet shifts in response to climate change. One important tool for assessing organism diet is bulk stable isotope analysis. However, key parameters necessary for interpreting the temporal context of stable isotope values are lacking, especially for Arctic species. This study provides the first experimental determination of isotopic turnover (as half-life) and trophic discrimination factors (TDFs) of both δ¹³ C and δ¹⁵ N in adult polar cod muscle. Using a diet enriched in both ¹³ C and ¹⁵ N, we measured isotopic turnover times of 61 and 49 days for δ¹³ C and δ¹⁵ N, respectively, with metabolism accounting for >94% of the total turnover. These half-life estimates are valid for adult polar cod (>3 years) experiencing little somatic growth. We measured TDFs in our control of 2.6‰ and 3.9‰ for δ¹³ C and δ¹⁵ N, respectively, and we conclude that applying the commonly used TDF of ~1‰ for δ¹³ C for adult polar cod may lead to misrepresentation of dietary carbon source, while the use of 3.8‰ for δ¹⁵ N is appropriate. Based on these results, we recommend that studies investigating seasonal shifts in the diet of adult polar cod sample at temporal intervals of at least 60 days to account for isotopic turnover in polar cod muscle. Although isotopic equilibrium was reached by the fish in this study, it was at substantially lower isotope values than the diet. Additionally, the use of highly enriched algae in the experimental feed caused very high variability in diet isotope values which precluded accurate calculation of TDFs from the enriched fish. As a result of the challenges faced in this study, we discourage the use of highly enriched diets for similar experiments and provide recommendations to guide the design of future isotopic turnover experiments.

Unravelling the resilience of the KGK VI population from the Gumelnița site (Romania) through stable isotopes

The Gumelnița site belongs to the Kodjadermen-Gumelnița-Karanovo VI (KGK VI) communities (c. 4700-3900 cal BC) and comprises the tell-type settlement and its corresponding cemetery. This paper reconstructs the diet and lifeways of the Chalcolithic people in the northeastern Balkans using archaeological remains found at the Gumelnița site (Romania). A multi-bioarchaeological investigation (archaeobotany, zooarchaeology, anthropology) was conducted on vegetal, animal, and human remains, alongside radiocarbon dating and stable isotope analyses (δ¹³C, δ¹⁵N) of humans (n = 33), mammals (n = 38), reptiles (n = 3), fishes (n = 8), freshwater mussels shells (n = 18), and plants (n = 24). According to the results of δ¹³C and δ¹⁵N values and FRUITS, the inhabitants of Gumelnița had a diet based on crops and using natural resources, such as fish, freshwater molluscs and game. Although domestic fauna was occasionally exploited for meat, it had a role in providing secondary products. Crops were heavily manured, and chaff and other crop waste may have been necessary fodder for cattle and sheep. Dogs and pigs fed on human waste, although the diet of the latter is more similar to that of wild boars. Foxes had a diet close to dogs, which may indicate synanthropic behaviour. Radiocarbon dates were calibrated with the percentage of freshwater resources obtained by FRUITS. As a result, the corrected dates for the freshwater reservoir effect (FRE) have a delay of an average of 147 years. According to our data, this agrarian community developed a subsistence strategy under the pressure of some climatic changes that started after 4300 cal BC, corresponding to KGK VI rapid collapse/decline episode tracked recently (that begins around 4350 cal BC). This matching of our data in the two models (climatic and chrono-demographic) allowed us to capture the economic strategies that led to the resilience of those people more than other contemporary KGK VI communities.

Impact across ecosystem boundaries - Does Bti application change quality and composition of the diet of riparian spiders?

Emerging aquatic insects link aquatic and adjacent terrestrial food webs by subsidizing terrestrial predators with high-quality prey. One of the main constituents of aquatic subsidy, the non-biting midges (Chironomidae), showed altered emergence dynamics in response to the mosquito control agent Bacillus thuringiensis var. israelensis (Bti). As riparian spiders depend on aquatic subsidy, they may be affected by such changes in prey availability. Thus, we conducted a field study in twelve floodplain pond mesocosms (FPMs), six were treated with Bti (2.88 × 10⁹ ITU/ha, VectoBac WDG) three times, to investigate if the Bti-induced shift in chironomid emergence dynamics is reflected in their nutritional value and in the diet of riparian spiders. We measured the content of proteins, lipids, glycogen, and carbohydrates in emerged Chironomidae, and determined the stable isotope ratios of female Tetragnatha extensa, a web-building spider living in the riparian vegetation of the FPMs. We analysed the proportion of aquatic prey in spiders' diet, niche size, and trophic position. While the content of nutrients and thus the prey quality was not significantly altered by Bti, effects on the spiders' diet were observed. The trophic position of T. extensa from Bti-treated FPMs was lower compared to the control while the aquatic proportion was only minimally reduced. We assume that spiders fed more on terrestrial prey but also on other aquatic organisms such as Baetidae, whose emergence was unaffected by Bti. In contrast to the partly predaceous Chironomidae, consumption of aquatic and terrestrial primary consumers potentially explains the observed lower trophic position of spiders from Bti-treated FPMs. As prey organisms vary in their quality the suggested dietary shift could transfer previously observed effects of Bti to riparian spiders conceivably affecting their populations. Our results further support that anthropogenic stressors in aquatic ecosystems may translate to terrestrial predators through aquatic subsidy.

Trophic ecology of co-occurring fishes in the Sundays River Valley irrigation ponds, assessed using stable isotope and gut content analyses

The analysis of food web structures has increased the understanding of the dynamics of organisms belonging to different trophic levels. In this study, the diet of two native species, Glossogobius callidus and Gilchristella aestuaria, was assessed in the presence of two non-native species, Oreochromis mossambicus and Gambusia affinis, in irrigation ponds, Eastern Cape Province, South Africa. The proportion of dietary items consumed and assimilated by the four fish species were inferred from gut contents and carbon and nitrogen stable isotope analysis. Stable isotope analysis revealed that both G. affinis and O. mossambicus had a larger isotopic niche size than G. callidus and G. aestuaria. Although G. callidus fed on benthic resources and G. aestuaria fed on phytoplankton, gut content analysis showed that G. callidus, O. mossambicus and G. affinis fed predominantly on benthic resources, whereas G. aestuaria fed mainly on plankton resources. Considerable niche overlap corroborates the view that resource competition is a major factor shaping the composition of the four fish species. This study highlighted the low diversity of the food web within the Sundays River Valley irrigation ponds, where food items are shared by all the small-bodied fishes.

Brown trout (Salmo trutta L. 1758) and Arctic charr [Salvelinus alpinus (L. 1758)] display different marine behaviour and feeding strategies in sympatry

Brown trout (Salmo trutta L. 1758) and Arctic charr [Salvelinus alpinus (L. 1758)] tagged with acoustic transmitters migrated from fresh water to the sea mainly in May and June, but with large individual variation in migration timing. For S. trutta, large individuals (42-86 cm total length) migrated earlier in the season than small individuals (18-27 cm). For S. alpinus, no such pattern was found, likely because of the small size range of tagged fish (28-41 cm). S. trutta stayed longer at sea than S. alpinus (average 2 vs. 1 month). Early migrants of S. trutta stayed for a shorter period at sea than late migrants, whereas no such pattern was observed for S. alpinus. Large S. trutta moved quickly away from the river and spent average 3 days to reach a receiver line 20 km from the river mouth, whereas small S. trutta and S. alpinus migrating that far spent 2-3 weeks on the same distance. S. trutta utilized the entire fjord system and had a greater proportion of long-distance migrants (>20 km, 78% and 59% of large and small S. trutta, respectively) than S. alpinus (29%). S. alpinus mostly stayed in the inner fjord areas, and none were recorded in the outermost part of the fjord. The difference in the use of marine areas may be caused by variation in prey choice and spatial distribution of the preferred prey groups. Stable isotope analysis showed that S. trutta had been feeding at a higher trophic level than S. alpinus. S. trutta had mainly fed on marine fish and shrimps, whereas S. alpinus had large proportions of freshwater invertebrates in the diet, suggesting that the estuary with benthos and amphipods drifting from the river was an important feeding habitat for S. alpinus. In conclusion, major differences in habitat use, migration patterns and feeding strategies were found between sympatric anadromous S. trutta and S. alpinus while at sea.

Critically endangered Rice's whales (Balaenoptera ricei) selectively feed on high-quality prey in the Gulf of Mexico

Determining the drivers of prey selection in marine predators is critical when investigating ecosystem structure and function. The newly recognized Rice's whale (Balaenoptera ricei) is one of the most critically endangered large whales in the world and endemic to the industrialized Gulf of Mexico. Here, we investigated the drivers of resource selection by Rice's whales in relation to prey availability and energy density. Bayesian stable isotope (δ¹³C, δ¹⁵N) mixing models suggest that Rice's whales feed primarily on a schooling fish, Ariomma bondi (66.8% relative contribution). Prey selection using the Chesson's index revealed that active prey selection was found to be positive for three out of the four potential prey identified in the mixing model. A low degree of overlap between prey availability and diet inferred from the mixing model (Pianka Index: 0.333) suggests that prey abundance is not the primary driver of prey selection. Energy density data suggest that prey selection may be primarily driven by the energy content. Results from this study indicate that Rice's whales are selective predators consuming schooling prey with the highest energy content. Environmental changes in the region have the potential to influence prey species that would make them less available to Rice's whales.

Energetic connectivity of diverse elasmobranch populations - implications for ecological resilience

Understanding the factors shaping patterns of ecological resilience is critical for mitigating the loss of global biodiversity. Throughout aquatic environments, highly mobile predators are thought to serve as important vectors of energy between ecosystems thereby promoting stability and resilience. However, the role these predators play in connecting food webs and promoting energy flow remains poorly understood in most contexts. Using carbon and nitrogen isotopes, we quantified the use of several prey resource pools (small oceanic forage, large oceanics, coral reef, and seagrass) by 17 species of elasmobranch fishes (n = 351 individuals) in The Bahamas to determine their functional diversity and roles as ecosystem links. We observed remarkable functional diversity across species and identified four major groups responsible for connecting discrete regions of the seascape. Elasmobranchs were responsible for promoting energetic connectivity between neritic, oceanic and deep-sea ecosystems. Our findings illustrate how mobile predators promote ecosystem connectivity, underscoring their functional significance and role in supporting ecological resilience. More broadly, strong predator conservation efforts in developing island nations, such as The Bahamas, are likely to yield ecological benefits that enhance the resilience of marine ecosystems to combat imminent threats such as habitat degradation and climate change.

Spatial variations of biochemical content and stable isotope ratios of size-fractionated plankton in the Mediterranean Sea (MERITE-HIPPOCAMPE campaign)

Plankton represents the main source of carbon in marine ecosystems and is consequently an important gateway for contaminants into the marine food webs. During the MERITE- HIPPOCAMPE campaign in the Mediterranean Sea (April-May 2019), plankton was sampled from pumping and net tows at 10 stations from the French coast to the Gulf of Gabès (Tunisia) to obtain different size fractions in contrasted regions. This study combines various approaches, including biochemical analyses, analyses of stable isotope ratios (δ¹³C, δ¹⁵N), cytometry analyses and mixing models (MixSiar) on size-fractions of phyto- and zooplankton from 0.7 to >2000 μm. Pico- and nanoplankton represented a large energetic resource at the base of pelagic food webs. Proteins, lipids, and stable isotope ratios increased with size in zooplankton and were higher than in phytoplankton. Stable isotope ratios suggest different sources of carbon and nutrients at the base of the planktonic food webs depending on the coast and the offshore area. In addition, a link between productivity and trophic pathways was shown, with high trophic levels and low zooplankton biomass recorded in the offshore area. The results of our study highlight spatial variations of the trophic structure within the plankton size-fractions and will contribute to assess the role of the plankton as a biological pump of contaminants.

A glimpse into the trophic ecology of deep-water sharks in an important crustacean fishing ground

Deep-water sharks are among the most vulnerable deep-water taxa because of their extremely conservative life-history strategies (i.e., late maturation, slow growth, and reproductive rates), yet little is known about their biology and ecology. Thus, this study aimed at investigating the trophic ecology of five deep-water shark species, the birdbeak dogfish (Deania calcea), the arrowhead (D. profundorum), the smooth lanternshark (Etmopterus pusillus), the blackmouth catshark (Galeus melastomus) and the knifetooth dogfish (Scymnodon ringens) sampled onboard a crustacean bottom-trawler off the south-west coast of Portugal. We combined carbon and nitrogen stable isotopes with RNA and DNA (RD) ratios to investigate the main groups of prey assimilated by these species and their nutritional condition, respectively. Stable isotopes revealed overall small interspecific variability in the contribution of different taxonomic groups to sharks' tissues, as well as in the origin of their prey. S. ringens presented higher δ¹⁵ N and δ¹³ C values than the other species, suggesting reliance on bathyal cephalopods, crustaceans and teleosts; the remaining species likely assimilated bathy-mesopelagic prey. The RD ratios indicated that most of the individuals had an overall adequate nutritional condition and had recently eaten. This information, combined with the fact that stable isotopes indicate that sharks assimilated prey from the local or nearby food webs (including commercially important shrimps), suggests a potential overlap between this fishing area and their foraging grounds, which requires further attention.

Trophic ecology of juvenile bull sharks (Carcharhinus leucas) in the Coyote estuary, Costa Rica

Bull shark (Carcharhinus leucas) is a near-threatened elasmobranch species capable of moving between the fresh and salty waters of tropical and subtropical coastal areas, for which we still lack important ecological information. During their first years of life, bull sharks use estuarine systems as nursery areas, making them highly susceptible to environmental and anthropogenic pressures. We studied the trophic ecology of juveniles found in the Coyote estuary, a potential nursery area in Costa Rica, to understand the potential impact of further bull shark declines and gain knowledge that could aid in their conservation. We analysed the trophic ecology of juvenile bull sharks [81-103 cm total length (TL)] in the Coyote estuary, Costa Rica, using stable isotopes of δ¹⁵ N and δ¹³ C. Since one problem using this technique in juveniles is the confounding effect of the maternal signature, we sampled different tissues (muscle and plasma), verified the status of the shark's umbilical scar and identified the size at which the isotope signature is a result of the animal's current diet. The isotopic values of the muscle tissue reflected the maternal isotopic signature. In contrast, plasma values reflected the diet of juvenile bull sharks >95 cm TL and with a closed umbilical scar. Juvenile bull sharks fed primarily on teleost fishes of the order Anguilliformes and Siluriformes, and have a high trophic position (≥4.0) in the Coyote estuary. Our findings suggest that this estuary is an important feeding site for juvenile bull sharks of the Pacific of Costa Rica. Thus, the protection of essential habitats such as the Coyote estuary will benefit not only bull shark conservation, but also the conservation of an array of fish species that also use this habitat as a rookery, many of which are of commercial interest.

Innovative approach to reveal source contribution of dissolved organic matter in a complex river watershed using end-member mixing analysis based on spectroscopic proxies and multi-isotopes

Dissolved organic matter (DOM) in river watersheds dynamically changes based on its source during a monsoon period with storm event. However, the variations in DOM in urban and rural river watersheds that are dominated by point and non-point sources have not been adequately explored to date. We developed an innovative approach to reveal DOM sources in complex river watershed systems during pre-monsoon, monsoon, and post-monsoon periods using end-member mixing analysis (EMMA) by combining multi-isotope values (δ¹³C-DOC, δ¹⁵N-NO₃ and δ¹⁸O-NO₃) and spectroscopic indices (fluorescence index [FI], biological index [BIX], humification index [HIX], and specific UV absorbance [SUVA]). Several potential end-members of DOM sources were collected from watersheds, including top-soils, groundwater, plant group (fallen leaves, riparian plants, suspended algae), and different effluents (cattle and pig livestock, agricultural land, urban, industry facility, swine treatment facility and wastewater treatment facility). Concentrations of dissolved organic carbon, dissolved organic nitrogen, NO₃-N, and NH₄-N increased during the monsoon period with an increase in the input of anthropogenic DOM, which have higher HIX values owing to the flushing effect. The results of EMMA indicate that soil and agricultural effluents accounted for a substantial contribution of anthropogenic DOM at varying rates based on seasons. We also found that results of EMMA based on combining spectroscopic indices and δ¹³C-DOC isotope values were more accurate in tracing DOM sources with respect to land-use characteristics compared to applying only spectroscopic indices. The positive relationship between FI, BIX and δ¹⁵N-NO₃ were revealed that nitrate would be decomposed from DOM affected by intensive agricultural activities. In addition, consistent with the EMMA results, the molecular composition of the DOM was clearly evidenced by a large number of CHON formulas, accounting for over 50% of the total characterized compounds, including pesticides and pharmaceuticals used in agriculture farmland and livestock. Our results clearly demonstrated that EMMA based on combing multi-stable isotopes and spectroscopic indices could be trace the DOM source, which is important for understanding changes in the DOM quality, and application of nitrate isotopes and molecular analysis supports in-depth interpretation. This study provides easy and intuitive techniques for the estimation of the relative impacts of DOM sources in complex river watersheds, which can be verified in various ways rather than relying on a single technique approach.

Diet flexibility of wolves and black bears in the range of migratory caribou

The diet of predators can be highly variable, which is exemplified by their ability to acclimate to a wide range of ecological conditions. Such flexibility in foraging may be a key aspect of their performance in unpredictable environments such as at the edge of the range of a species or where food availability varies greatly in time and space. Gaining information on the diets of predators under such conditions could foster our comprehension of their ecological flexibility and the potential role of predation on the population dynamics of prey. We determined the diet of wolves (Canis lupus) and black bears (Ursus americanus) in northern Québec and Labrador (Canada) within the range of two migratory caribou (Rangifer tarandus) herds: the high-abundance Rivière-aux-Feuilles herd (RFH) and low-abundance Rivière-George herd (RGH). Worldwide, decline in caribou populations has become a concern, stressing the need to better understand the factors involved in these declines, including predation. In northern Québec (RFH range), caribou was the primary year-round prey of wolves while moose (Alces alces) and muskoxen (Ovibos moschatus) were consumed in some sectors. The diet of wolves in northern Labrador (RGH range) varied seasonally, with caribou, moose, and fish as main prey during different periods throughout the year. Black bear diets varied seasonally and regionally. Among the foods we analyzed, caribou was the main source of animal protein for bears in northern Québec and northern Labrador, except during a high abundance of Ungava collared lemming (Dicrostonyx hudsonius). Only bears in northern Québec ate caribou during late summer/fall. Our results highlight the diet flexibility of wolves and black bears in northern food webs, and how their diets change in relation to the distribution and abundance of prey. Our results will help quantify the potential impact of these predators on prey populations in northern systems.

Anthropogenic nutrient loading affects both individual species and the trophic structure of river fish communities

Although the concept of trophic interactions has been used for a long time, there are still considerable gaps in our understanding of the effect of various environmental factors on trophic interactions within river fish assemblages. Carbon (δ13C) and nitrogen (δ15N) stable isotope ratios of 20 species of fish belonging to both eurytopic and rheophilic ecological groups from a large temperate rivers were used to evaluate overall trophic niche use and trophic position of species, and to find out how environmental variability associated with nutrient loading affects individual and community-wide aspects of trophic structure. The study was carried out at 11 sites along the European rivers Vltava and Elbe, representing a continuous gradient of pollution and habitat degradation. Corrected Standard Ellipse Area (SEAc) was significantly larger for the group of eurytopic ecological species than for rheophilic species. Despite narrower isotopic niche space, rheophilic fish species occupied a higher trophic position, suggesting that these species use resources more enriched in 15N. Of the 11 environmental variables tested, nutrients had a significant effect on trophic niche area of species (SEAc), indicating that eutrophication is of critical importance for fish assemblages. Isotopic niche area of species was found to be positively influenced by total phosphorus, and negatively affected by concentrations of nitrate (N-NO3−) and ammonia (N-NH4+). A negative association between oxygen demand and a measure of trophic diversity - mean distance to centroid (CD)- and a measure of density and clustering of species - mean nearest neighbor distance (MNND)- were found, indicating that the oxygen demand is a key factor influencing community trophic structure. An observed pattern where nutrient loading influenced both individual species and trophic structure of the fish assemblage provides strong support for an anthropogenic influence on riverine food webs.

Using MixSIAR to quantify mixed contributions of primary producers from amino acid δ15N of marine consumers

Estimations of the trophic position and the food web nitrogen baseline from compound-specific isotope analysis of individual amino acids (CSIA-AA) are challenged when the diet of consumer organisms relies on different proportions of vascular and non-vascular primary producers. Here we propose a method to infer such proportions using mixing models and the δ¹⁵N CSIA-AA values from marine herbivores. Combining published and new data, we first characterized CSIA-AA values in phytoplankton, macroalgae and vascular plants, and determined their characteristic β values (i.e. the isotopic difference between trophic and source AA). Then, we applied MixSIAR Bayesian isotope mixing models to investigate the transfer of these isotopic signals to marine herbivores (molluscs, green turtles, zooplankton and fish), and their utility to quantify autotrophic sources. We demonstrated that primary producer groups have distinct δ¹⁵N_AA fingerprints that can be tracked into their primary consumers, thus offering a rapid solution to quantify resource utilization and estimate β_mix values in mixed-sourced environments.

Crowding in the middle of marine food webs: A focus on Raja asterias and other mediterranean batoids

The Mediterranean Sea is among the three biodiversity hotspots of the world where elasmobranchs are severely threatened. Elasmobranchs act as apex or meso-predators within marine food webs and the loss/decline of apex predators determines the mesopredator release, leading in turn to increased predation on smaller prey. However, also several mesopredators (including rays, skates and small sharks) are intensively fished, being of commercial interest, or by-caught, and thus mesopredators increase could not be so evident. We analysed the trophic ecology of an endemic Mediterranean ray, the starry ray Raja asterias, at a seasonal scale from the Adriatic basin, one of the most intensively exploited area of the Mediterranean, by means of stomach contents and stable isotopes analyses. Our results evidenced that starry rays rely on benthic sources including species of local commercial values, such as swimming crabs, small cephalopods, and stomatopods and share the same trophic position with other elasmobranchs (rays, skates, and small sharks) and other mesopredators (e.g., common soles, Norway lobsters and mullets). As all mesopredators are overexploited, as well as their benthic prey are affected by intense trawl-fishing, the whole food webs are disrupted and neither the classical trophic cascade nor the mesopredator release hypothesis could be verified. Conservation measures for these species, such as the release after capture or the application of exclusion grids to the net, should be applied in areas where populations are strongly impacted by trawling.

Svalbard reindeer winter diets: Long-term dietary shifts to graminoids in response to a changing climate

Arctic ecosystems are changing dramatically with warmer and wetter conditions resulting in complex interactions between herbivores and their forage. We investigated how Svalbard reindeer (Rangifer tarandus platyrhynchus) modify their late winter diets in response to long-term trends and interannual variation in forage availability and accessibility. By reconstructing their diets and foraging niches over a 17-year period (1995-2012) using serum δ¹³ C and δ¹⁵ N values, we found strong support for a temporal increase in the proportions of graminoids in the diets with a concurrent decline in the contributions of mosses. This dietary shift corresponds with graminoid abundance increases in the region and was associated with increases in population density, warmer summer temperatures and more frequent rain-on-snow (ROS) in winter. In addition, the variance in isotopic niche positions, breadths, and overlaps also supported a temporal shift in the foraging niche and a dietary response to extreme ROS events. Our long-term study highlights the mechanisms by which winter and summer climate changes cascade through vegetation shifts and herbivore population dynamics to alter the foraging niche of Svalbard reindeer. Although it has been anticipated that climate changes in the Svalbard region of the Arctic would be detrimental to this unique ungulate, our study suggests that environmental change is in a phase where conditions are improving for this subspecies at the northernmost edge of the Rangifer distribution.

Isotopic niche alteration of a predator fish in a dammed Amazonian black water river

Although many upstream effects of a dam on the trophic ecology of fish have been reported, little is known about their downstream effects on the isotopic niche of Amazonian predator fish. The authors used stable isotope analysis of δ¹³ C and δ¹⁵ N to determine the downstream effects of damming of the Uatumã River on the niche width, carbon energy sources and trophic position of peacock bass Cichla temensis comparing with a free-flowing river in the Amazon basin, Brazil, during the peak flood and early falling water period of 2020. They found that the C. temensis population of the undammed river had a smaller niche width than the C. temensis population of the dammed river, despite the greater number of prey trophic levels utilized and the higher trophic position of C. temensis individuals. The results demonstrate that in both rivers there is a gradual shift in the contribution of prey fish sources to the diet of C. temensis throughout its growth, even among adult individuals. They conclude that the isotopic niche of C. temensis was altered by damming during the period of late high water to early low water in the Uatumã River.

Stomach content and stable isotope analyses provide complementary insights into the trophic ecology of coastal temperate bentho-demersal assemblages under environmental and anthropogenic pressures

Assessing organic matter fluxes and species interactions in food webs is of main interest to understand the ecological functioning in bays and estuaries characterised by a wide diversity of primary producers and consumers. Demersal fish and cephalopod assemblages were studied across a network of 24 shallow subtidal stations in the bay of Saint-Brieuc for their diversity, stable isotope compositions and stomach contents. The community was composed of 21 taxa, eight species accounting for 94.4% of the total abundance. Three different assemblages were identified along bathymetric gradient and spatial patterns in fish dredging. Marine POM and SOM were the most likely bases of food webs regarding δ13C range displayed by fish and cephalopod without differences among assemblages. Amphipoda was the main prey item in stomachs leading to significant diet overlaps among fish species, with some variations in additional items. Sepia officinalis was characterised by a singular diet and very low dietary overlap with other species. Contrasted stable isotope values and niche overlaps among species were evidenced in the δ13C/δ15N space. Callionymus lyra and Buglossidium luteum, characterised by the widest isotopic niches, encompassed those of other species, except the singular 13C-depleted Spondyliosoma cantharus. Coupling taxonomic assemblages, stomach contents and stable isotope analyses help disentangling the resources uses and evidencing trophic pathways. Contrasts in fish and cephalopod demersal assemblages occurring at different depths not necessarily imply differences in the trophic resources uses in such complex shallow coastal ecosystems under anthropogenic influences.

Seasonal Trophic Ecology and Diet Shift in the Common Sole Solea solea in the Central Adriatic Sea

The common sole, Solea solea, is one the most important commercial species in Europe and, within the Mediterranean, the Adriatic basin is the most crucial area for its production. Although the species is overexploited in the basin, data on its trophic ecology are fragmentary, even though this is one of the most important features within the Ecosystem Approach to Fishery. Here, we analysed temporal variations in the feeding ecology of the species by using an integrated approach of stomach contents and stable isotope analyses coupled with the analysis of some condition indices such as the gonadosomatic and the hepatosomatic indices. Changes in diet and trophic level across the years in adult females were clearly linked to the different energetic requirements facing reproduction. Temporal changes throughout the year were mainly related to changes in food availability. This study confirms the opportunistic behaviour of this benthophagous species and its role as a mesopredator, opening new perspectives for further investigations on the effects of the overexploitation of this important fishery resource on the marine trophic web.

FRAME-Monte Carlo model for evaluation of the stable isotope mixing and fractionation

Bayesian stable isotope mixing models are widely used in geochemical and ecological studies for partitioning sources that contribute to various mixtures. However, none of the existing tools allows accounting for the influence of processes other than mixing, especially stable isotope fractionation. Bridging this gap, new software for the stable isotope Fractionation And Mixing Evaluation (FRAME) has been developed with a user-friendly graphical interface (malewick.github.io/frame). This calculation tool allows simultaneous sources partitioning and fractionation progress determination based on the stable isotope composition of sources/substrates and mixture/products. The mathematical algorithm applies the Markov-Chain Monte Carlo model to estimate the contribution of individual sources and processes, as well as the probability distributions of the calculated results. The performance of FRAME was comprehensively tested and practical applications of this modelling tool are presented with simple theoretical examples and stable isotope case studies for nitrates, nitrites, water and nitrous oxide. The open mathematical design, featuring custom distributions of source isotope signatures, allows for the implementation of additional processes that alternate the characteristics of the final mixture and its application for various range of studies.

Contrasting water sources used by a coniferous forest in the high-altitude, southeastern Tibetan Plateau

Forest trees use various water sources to adapt to environmental conditions in mountainous regions. However, water resources variances along elevational gradients are not clearly understood. This limits the assessment of the ecosystem responses to climate change. In this study, stable oxygen and hydrogen isotopes were used to investigate the spatiotemporal patterns of water sources for Faber's fir in a humid high-altitude elevational gradient (ranging between 2800 m.a.s.l. and 3700 m.a.s.l.) on the southeastern Tibetan Plateau. The results indicated that 27 ± 8.3 % of the xylem water was from previous winter snowmelt between May and June. In contrast, almost all xylem water was from current summer precipitation between July and October. Faber's fir at the lower elevation (2800 m.a.s.l.) primarily relied on water derived from winter precipitation during May and June. Yet, trees located near the tree line (3700 m.a.s.l.) were mostly dependent on current precipitation over the entire growing season. However, when statistically analyzing data from all seven different elevation gradients in this study, the contribution of winter precipitation to xylem water was not elevation dependent. Precipitation contributed to a large proportion (59.86 % ± 33.43 %) of xylem water between May and October. Meanwhile, no linear contribution ratio of precipitation to trees was identified in this high-altitude elevational gradient. The replenishment of soil water and the soil water storage determine the spatiotemporal patterns of water sources. Climate change has the possibility of reducing winter precipitation at high altitudes on the Tibetan Plateau. Thus, tree water use at different altitude gradients will play varied roles in influencing the evolution of forest composition under ongoing climate change.

MesopTroph, a database of trophic parameters to study interactions in mesopelagic food webs

Mesopelagic organisms play a crucial role in marine food webs, channelling energy across the predator-prey network and connecting depth strata through their diel vertical migrations. The information available to assess mesopelagic feeding interactions and energy transfer has increased substantially in recent years, owing to the growing interest and research activity in the mesopelagic realm. However, such data have not been systematically collated and are difficult to access, hampering estimation of the contribution of mesopelagic organisms to marine ecosystems. Here we present MesopTroph, a georeferenced database of diet, trophic markers, and energy content of mesopelagic and other marine taxa compiled from 203 published and non-published sources. MesopTroph currently includes data on stomach contents, carbon and nitrogen stable isotopes, major and trace elements, energy density, fatty acids, trophic positions, and diet proportion estimates for 498 species/genera. MesopTroph will be expanded with new data emerging from ongoing studies. MesopTroph provides a unique tool to investigate trophic interactions and energy flow mediated by mesopelagic organisms, and to evaluate the ecosystem services of this community.

The significance of cephalopod beaks as a research tool: An update

The use of cephalopod beaks in ecological and population dynamics studies has allowed major advances of our knowledge on the role of cephalopods in marine ecosystems in the last 60 years. Since the 1960's, with the pioneering research by Malcolm Clarke and colleagues, cephalopod beaks (also named jaws or mandibles) have been described to species level and their measurements have been shown to be related to cephalopod body size and mass, which permitted important information to be obtained on numerous biological and ecological aspects of cephalopods in marine ecosystems. In the last decade, a range of new techniques has been applied to cephalopod beaks, permitting new kinds of insight into cephalopod biology and ecology. The workshop on cephalopod beaks of the Cephalopod International Advisory Council Conference (Sesimbra, Portugal) in 2022 aimed to review the most recent scientific developments in this field and to identify future challenges, particularly in relation to taxonomy, age, growth, chemical composition (i.e., DNA, proteomics, stable isotopes, trace elements) and physical (i.e., structural) analyses. In terms of taxonomy, new techniques (e.g., 3D geometric morphometrics) for identifying cephalopods from their beaks are being developed with promising results, although the need for experts and reference collections of cephalopod beaks will continue. The use of beak microstructure for age and growth studies has been validated. Stable isotope analyses on beaks have proven to be an excellent technique to get valuable information on the ecology of cephalopods (namely habitat and trophic position). Trace element analyses is also possible using beaks, where concentrations are significantly lower than in other tissues (e.g., muscle, digestive gland, gills). Extracting DNA from beaks was only possible in one study so far. Protein analyses can also be made using cephalopod beaks. Future challenges in research using cephalopod beaks are also discussed.

Intercontinental analysis of temperate steppe stream food webs reveals consistent autochthonous support of fishes

Quantifying the trophic basis of production for freshwater metazoa at broad spatial scales is key to understanding ecosystem function and has been a research priority for decades. However, previous lotic food web studies have been limited by geographic coverage or methodological constraints. We used compound-specific stable carbon isotope analysis of amino acids (AAs) to estimate basal resource contributions to fish consumers in streams spanning grassland, montane and semi-arid ecoregions of the temperate steppe biome on two continents. Across a range of stream sizes and light regimes, we found consistent trophic importance of aquatic resources. Essential AAs of heterotrophic microbial origin generally provided secondary support for fishes, while terrestrial carbon did not seem to provide significant, direct support. These findings provide strong evidence for the dominant contribution of carbon to higher-order consumers by aquatic autochthonous resources (primarily) and heterotrophic microbial communities (secondarily) in temperate steppe streams.

Expanding the invasion toolbox: including stable isotope analysis in risk assessment

Species introductions are a major concern for ecosystem functioning, socio-economic wealth, and human well-being. Preventing introductions proved to be the most effective management strategy, and various tools such as species distribution models and risk assessment protocols have been developed or applied to this purpose. These approaches use information on a species to predict its potential invasiveness and impact in the case of its introduction into a new area. At the same time, much biodiversity has been lost due to multiple drivers. Ways to determine the potential for successful reintroductions of once native but now extinct species as well as assisted migrations are yet missing. Stable isotope analyses are commonly used to reconstruct a species’ feeding ecology and trophic interactions within communities. Recently, this method has been used to predict potentially arising trophic interactions in the absence of the target species. Here we propose the implementation of stable isotope analysis as an approach for assessment schemes to increase the accuracy in predicting invader impacts as well as the success of reintroductions and assisted migrations. We review and discuss possibilities and limitations of this methods usage, suggesting promising and useful applications for scientists and managers.

Energetic consequences of resource use diversity in a marine carnivore

Understanding how intraspecific variation in the use of prey resources impacts energy metabolism has strong implications for predicting long-term fitness and is critical for predicting population-to-community level responses to environmental change. Here, we examine the energetic consequences of variable prey resource use in a widely distributed marine carnivore, juvenile sand tiger sharks (Carcharias taurus). We used carbon and nitrogen isotope analysis to identify three primary prey resource pools-demersal omnivores, pelagic forage, and benthic detritivores and estimated the proportional assimilation of each resource using Bayesian mixing models. We then quantified how the utilization of these resource pools impacted the concentrations of six plasma lipids and how this varied by ontogeny. Sharks exhibited variable reliance on two of three predominant prey resource pools: demersal omnivores and pelagic forage. Resource use variation was a strong predictor of energetic condition, whereby individuals more reliant upon pelagic forage exhibited higher blood plasma concentrations of very low-density lipoproteins, cholesterol, and triglycerides. These findings underscore how intraspecific variation in resource use may impact the energy metabolism of animals, and more broadly, that natural and anthropogenically driven fluctuations in prey resources could have longer term energetic consequences.

Population dynamics and resource availability drive seasonal shifts in the consumptive and competitive impacts of introduced house mice (Mus musculus) on an island ecosystem

Background

House mice (Mus musculus) are widespread and invasive on many islands where they can have both direct and indirect impacts on native ecological communities. Given their opportunistic, omnivorous nature the consumptive and competitive impacts of house mice on islands have the potential to vary over time in concert with resource availability and mouse population dynamics.

Methods

We examined the ecological niche of invasive house mice on Southeast Farallon Island, California, USA using a combination of mouse trapping, food resource surveys, and stable isotope analysis to better understand their trophic interactions with native flora and fauna. Specifically, we coupled the analysis of seasonal variation in resource availability over a 17-year period (2001-2017), carbon (δ ¹³C) and nitrogen (δ ¹⁵N) stable isotope values of mouse tissue and prey resources in a single year (2013), and isotopic niche and mixing models to quantify seasonal variation in mouse diets and the potential for resource overlap with native species.

Results

We found that plants were the most important resource for house mice during the spring months when vegetation is abundant and mouse populations are low following heavy precipitation and declines in mouse abundance during the winter. While still consumed, plants declined in dietary importance throughout the summer and fall as mouse populations increased, and seabird and arthropod resources became relatively more available and consumed by house mice. Mouse abundance peaks and other resource availability are low on the island in the fall months when the isotopic niches of house mice and salamanders overlap significantly indicating the potential for competition, most likely for arthropod prey.

Discussion

Our results indicate how seasonal shifts in both mouse abundance and resource availability are key factors that mediate the consumptive and competitive impacts of introduced house mice on this island ecosystem. As mice consume and/or compete with a wide range of native taxa, eradication has the potential to provide wide-reaching restoration benefits on Southeast Farallon Island. Post-eradication monitoring focused on plant, terrestrial invertebrate, salamander, and seabird populations will be crucial to confirm these predictions.

Empirical food webs of 12 tropical reservoirs in Singapore

Background

Food webs summarise trophic interactions of the biotic components within an ecosystem, which can influence nutrient dynamics and energy flows, ultimately affecting ecosystem functions and services. Food webs represent the hypothesised trophic links between predators and prey and can be presented as empirical food webs, in which the relative strength/importance of the respective links are quantified. Some common methods used in food web research include gut content analysis (GCA) and stable isotope analysis (SIA). We combine both methods to construct empirical food web models as a basis for monitoring and studying ecosystem-level outcomes of natural (e.g. species turnover in fish assemblage) and intentional environmental change (e.g. biomanipulation).

New information

We present 12 food webs from tropical reservoir communities in Singapore and summarise the topology of each with widely-used network indices (e.g. connectance, link density). Each reservoir was surveyed over 4-6 sampling occasions, during which, representative animal groups (i.e. fish species and taxonomic/functional groups of zooplankton and benthic macroinvertebrates) and all likely sources of primary production (i.e. macrophytes, periphyton, phytoplankton and riparian terrestrial plants) were collected. We analysed gut content in fishes and bulk isotope (d13C and d15N) profiles of all animals (i.e. fishes and invertebrates) and plants collected. Both sets of information were used to estimate the relative strength of trophic relationships using Bayesian mixing models. We document our protocol here, alongside a script in the R programming language for executing data management/analyses/visualisation procedures used in our study. These data can be used to glean insights into trends in inter- and intra-specific or guild interactions in analogous freshwater lake habitats.

Linking sexual size dimorphism to trophic niche partitioning in a generalist predator

Sexual size dimorphism is a common phenomenon in mammals, and researchers have been trying to demonstrate the evolutionary causes leading to sexual dimorphism. Two main hypotheses emerged: (1) the sexual selection hypothesis and (2) the sexual competition hypothesis (also called resource partitioning hypothesis). Here, we attempted to link sexual dimorphism in fishers ( Pekania pennanti (Erxleben, 1777)) with their fall diet using stable isotope profiling and body and skull measurements. We used the carcasses of 39 fishers which were caught in eastern Québec during fall 2014 by volunteer trappers as well as several potential prey items ranging from small rodents to cervids. We expected minimal niche overlap between sexes, as males should be able to exploit different prey species than females. We also expected to observe an effect of age class (adults vs. juveniles) on trophic niche. As expected, we found great evidence of sexual dimorphism in both body mass and skull measurements: males were heavier and longer than females and had a larger zygomatic and intracanine width and a longer skull. While proportions of prey in diet according to sex and age did not vary greatly, we found some evidence of niche partitioning using Layman's metrics. Indeed, females tended to have a less diversified and more similar diet compared to one another, whereas males showed more diversified and contrasted diets. Despite our limited sample size, our findings provide partial support to the sexual competition hypothesis, as the difference in body and skull size based on sex could have evolved to lessen intraspecific competition in fishers.

Ontogenetic shift in diet and trophic role of Raja clavata inferred by stable isotopes and stomach content analysis in the Sea of Marmara

Trophic ecology studies on predator-prey interactions reveal insights into ecological communities and help understand a species' role in the food web by contributing to improved fisheries management and conservation capabilities. Understanding the ecological role of overexploited and endangered predators is essential to deciphering how their feeding behaviour influences food web dynamics. In this study, the authors investigated the feeding behaviour of the common and IUCN-listed Near Threatened (NT) thornback ray Raja clavata, using carbon and nitrogen stable isotope and stomach content analysis (SCA). It has recently suffered an 87% decline in reported catches from the Sea of Marmara within the last decade. These results show that thornback ray mainly feeds on teleost species, except in summer, with both methods showing this species changes its diet ontogenetically by SCA. This ontogenetic diet shift was at lengths 40-50 cm by changing group preferences from Crustacea to Teleostei. MixSIAR results showed that both adult and juvenile individuals of R. clavata feed mainly on the crustaceans, but the contribution of teleosts represented by Trachurus sp. was very low (<15%). The trophic position increased total length and was higher than other batoid species in the Sea of Marmara.

The occurrence and feeding of a critically endangered shark species, Oxynotus centrina in the Sea of Marmara

The angular roughshark, Oxynotus centrina (Linnaeus, 1758), is a rarely encountered deep-sea demersal shark species. It is listed as "Critically Endangered" in the IUCN's regional assessment for the Mediterranean. Like other sharks and rays, the angular roughshark is subject to by-catch in demersal trawl and longline fisheries. This study contributes new knowledge on (a) its occurrence, size and sex information; and (b) its feeding ecology in the Sea of Marmara. Data were collected on total length (TL), total weight (TW) and sex from unpublished research survey reports performed intermittently from 1994 to 2020. According to the data, O. centrina was mainly recorded from the muddy sand bottom type in the southwest region of the Marmara Sea, which has higher biodiversity of macrobenthic species than other regions. Different methodological approaches were conducted to understand its feeding, such as DNA metabarcoding and isotope analysis to identify its prey spectra and assign a trophic level. Sampled specimens were full of liquid in their stomachs without any discernible visually identifiable prey items. The metabarcoding analyses were also unsuccessful in identifying any prey items. Trophic position calculation based on nitrogen isotope in muscles highlighted that O. centrina has the highest trophic position compared to the other sharks and rays in the Sea of Marmara. Although it was found mainly feeding on polychaetes and sipunculids species from previous studies, the δ¹⁵ N values made the authors cautious about the possibility of this species feeding on low trophic-level benthic invertebrates. Because the authors could not observe the presence of shark vitellus in the stomachs and could not succeed in DNA identification for prey, this study highlights high δ¹⁵ N values similar to top predators for O. centrina. The authors conclude that this species strategically feeds mainly on shark eggs to fulfil its nutritional requirements with minimum energy expenditure in line with its slow-moving behaviour and mouth morphology.

Trophic structure of fish communities in mangrove systems subject to different levels of anthropogenic intervention, Tropical Eastern Pacific, Colombia

Mangroves are important ecosystems of tropical and subtropical shorelines. Anthropogenic activity decreases their habitat quality, affecting structural and functional trophic features. We hypothesized that higher levels of anthropogenic intervention generate diversity loss and modify the trophic structure of tropical mangrove fish communities. We compared the taxonomic and isotopic (δ¹³C/δ¹⁵N) composition, abundance, trophic position, and isotopic niche of fish communities from three mangrove systems with different anthropogenic intervention levels in the Colombian Pacific. Non-parametric statistical tests and a Bayesian approach were used to analyze data. A total of 1254 specimens belonging to 23 families, 25 genera, and 30 species were identified, presenting higher abundance (821) in moderate anthropogenic intervention level mangrove (Moderate-AIL), with high dominance of one species (Lile stolifera). The low anthropogenic intervention level mangrove (Low-AIL) was the second in abundance (291) but exhibited a greater number of species (23), while the high anthropogenic intervention level mangrove (High-AIL) presented the least abundance (142) and species number (17). The isotopic composition ​​reveals that Moderate and High-AIL mangroves presented enriched ¹³C and ¹⁵ N compared to Low-AIL (~ 2 to 4 ‰). Mean trophic position (TP) of communities was slightly higher in the more intervened systems (~ 1 to 2 orders of magnitude), as well as in specific species (Centropomus spp.). Isotopic niche width (TA and SEAc) was greater in High-AIL (41.1 and 9.2), more than doubled compared to Moderate-AIL (33.0 and 4.1). In High-AIL isotopic niche width increased, indicating lesser availability of prey and basal resources. The results obtained in this study support the proposed hypothesis and, suggest that anthropogenic intervention modifies diversity and food webs dynamics, affecting the transfer of matter and energy from macrotidal tropical mangroves to coastal ecosystems. However, it is recommended to be careful concluding differences based exclusively on the anthropogenic intervention level, since it is widely documented that mangrove settings also influence the analyzed trophic parameters.

Paleodietary reconstruction of endemic rodents from the precolumbian Dominican Republic: Discriminating wild feeding behavior from diets linked to human niche construction activities

In the Greater Antilles, certain animal taxa that have long been theorized to have been managed by indigenous peoples prior to AD1492, the main candidates being a group of endemic caviomorph rodents known as hutias (Capromyinae). This isotopic study investigates the paleodiets of several species of endemic rodents from three late precolonial sites in the northern Dominican Republic: El Flaco (cal. ad 990-1452), El Carril (cal. ad 1030-1262), and La Entrada (cal. ad 840-900) to assess whether human influence over animal diets can be determined. We examined bone collagen carbon (δ13Cco) and nitrogen (δ15N) and tooth enamel carbon (δ13Cen) isotope values of three species of hutias, Isolobodon portoricensis, Isolobodon montanus, and Plagiodontia aedium, alongside edible rat (Brotomys sp.), and domestic guinea pig (Cavia porcellus). To estimate dietary source contributions, we employed a Bayesian dietary mixing model (FRUITS v.3.0) and ran three different permutations to assess the relative contributions of C3 or C4/CAM plants. The addition of an extra 79 wild C3 and 40 wild C4/CAM plant species' isotope values from published sources to an established isotopic foodweb for the Caribbean region enabled us to discriminate between wild and domestic C3 and C4/CAM plant food sources in two of these models. Our results provide evidence of the significant consumption of domestic C4/CAM plants by some animals. This likely represents maize (Zea mays) consumption, which is known to have been ubiquitously cultivated by indigenous peoples in the region. This is particularly the case for I. portoricensis, as FRUITS modeling suggests that a few individuals consumed C4/CAM plants well beyond their expected natural diets as determined from feeding studies of extant hutia species. This may indicate human influence over endemic rodent diets due to niche construction activities such as horticultural practices and may reflect either opportunistic feeding on human produce or the purposeful supplementation of hutia diets by humans.

Drought altered trophic dynamics of an important natural saline lake: A stable isotope approach

Climate change and associated droughts threaten the ecology and resilience of natural saline lakes globally. There is a distinct lack of research regarding their ecological response to climatic events in the Global South. This region is predicted to experience climatic events such as El Niño-Southern Oscillation (ENSO) more often and with greater severity with the potential to alter the structure and functioning of aquatic ecosystems significantly. From 2015 to 2016 South Africa experienced one of the most severe country-wide droughts as a result of a strong ENSO event. Our study aimed to investigate the effect of this supra-seasonal drought on the trophic structure of fish communities in a naturally saline shallow lake of a Ramsar wetland using stable isotope techniques. Fishes and potential basal sources were collected from the lake, during predrought conditions in 2010 and after severe drought (recovery phase; 2017). The δ¹³C and δ¹⁵N values of food web elements were determined and analysed using Bayesian mixing models and Bayesian Laymen metrics to establish the proportional contribution of C₃ and C₄ basal sources to the fish (consumer) diets, and examine the fish community in terms of isotopic niche and trophic structure, respectively. Fish consumers relied predominantly on C₃ basal sources in the predrought and shifted to greater reliance on C₄ basal sources, decreased isotopic niche space use and a reduction in trophic length in the recovery phase. Drought altered the type and abundance of the basal sources available by limiting sources to those that are more drought-tolerant, reducing the trophic pathways of the food web with no significant alterations in the fish community. These results demonstrate the resilience and biological plasticity of Lake Nyamithi and its aquatic fauna, highlighting the importance of freshwater inflow to saline lakes with alterations thereof posing a significant threat to their continued functioning.

Diet variation in a critically endangered marine predator revealed with stable isotope analysis

Understanding the foraging ecology of animals gives insights into their trophic relationships and habitat use. We used stable isotope analysis to understand the foraging ecology of a critically endangered marine predator, the Māui dolphin. We analysed carbon and nitrogen isotope ratios of skin samples (n = 101) collected from 1993 to 2021 to investigate temporal changes in diet and niche space. Genetic monitoring associated each sample with a DNA profile which allowed us to assess individual and population level changes in diet. Potential prey and trophic level indicator samples were also collected (n = 166; 15 species) and incorporated in Bayesian mixing models to estimate importance of prey types to Māui dolphin diet. We found isotopic niche space had decreased over time, particularly since the 2008 implementation of a Marine Mammal Sanctuary. We observed a decreasing trend in ∂¹³C and ∂¹⁵N values, but this was not linear and several fluctuations in isotope values occurred over time. The largest variation in isotope values occurred during an El Niño event, suggesting that prey is influenced by climate-driven oceanographic variables. Mixing models indicated relative importance of prey remained constant since 2008. The isotopic variability observed here is not consistent with individual specialization, rather it occurs at the population level.

Impacts of tracer type, tracer selection, and source dominance on source apportionment with sediment fingerprinting

Sediment fingerprinting estimates the proportional contribution of fine sediment from distinct catchment sources delivered to downstream receiving environments. Increased attention has focused on assessing the accuracy of source contribution estimates, particularly in relation to tracer selection and statistical un-mixing procedures. However, no studies have systematically tested the impact of source combination or dominance on the accuracy of source estimates. Here, we assess sensitivity to tracer type, selection, and number of sources, and examine how variations in the dominant sediment source affect the accuracy of source apportionments using numerical mixtures. Sources were sampled according to erosion process and land cover from a New Zealand catchment. Topsoil and subsoil (landslide) samples were collected from pasture, harvested pine, kānuka scrub, and native forest, while banks were sampled along the main channel. Samples were analysed for bulk geochemistry, fallout radionuclides, and compound specific stable isotopes (CSSIs). Source apportionment accuracy tended to decrease as source number increased, which reflected decreasing source discrimination. Tracer selection showed variations in accuracy but exhibited no clear pattern overall. Source combination and particularly the dominant source had the largest impact on accuracy, reflecting the level of discrimination for each source. Notably, channel bank was frequently identified as the dominant source when using CSSI tracers. While this partly reflected lower levels of discrimination, the CSSI apportionment was particularly sensitive to the use of post-unmixing corrections routinely applied to derive soil proportional contributions from isotopic proportions. This sensitivity likely related to the low organic carbon content in bank material and the assumption that source apportionments based on isotopic proportions can be corrected using a linear relationship with organic carbon content. These results indicate that the use of CSSI tracers in catchments where erosion sources exhibit large differences in soil organic carbon content may introduce significant unquantified error in source apportionments.

Stable isotope mixing models demonstrate the role of an invasive plant in wetland songbird food webs

Premise

Invasive plants in wetlands are often ecosystem engineers, mediating changes in ecosystem functions like trophic support. We documented the impacts of Lepidium latifolium, an invasive plant, on the food web of omnivorous birds (Suisun song sparrows, Melospiza melodia maxillaris) in a tidal wetland of northern California, USA.

Methods

We used analysis of natural abundance stable isotopes of 13C and 15N in song sparrow blood, invertebrate food sources, L. latifolium seeds, and other marsh plant seeds to inform Bayesian, concentration-dependent mixing models that predicted average song sparrow diets.

Results

Season and plant phenology influenced food source incorporation and isotopic signatures. Song sparrows showed higher isotopic variability in the summer. The observed changes in song sparrow diets were driven by altered invertebrate communities related to seasonal L. latifolium presence and by shifts from seeds to consumption of invertebrate food sources during the breeding season in the spring and summer.

Discussion

This study used stable isotope tools and modeling to demonstrate two mechanisms of isotopic influence by L. latifolium on omnivorous song sparrows. This study can inform site- and species-specific management strategies by demonstrating how changes to the plant community can impact entire trophic systems.

Amino acid nitrogen and carbon isotope data: Potential and implications for ecological studies

Explaining food web dynamics, stability, and functioning depend substantially on understanding of feeding relations within a community. Bulk stable isotope ratios (SIRs) in natural abundance are well-established tools to express direct and indirect feeding relations as continuous variables across time and space. Along with bulk SIRs, the SIRs of individual amino acids (AAs) are now emerging as a promising and complementary method to characterize the flow and transformation of resources across a diversity of organisms, from microbial domains to macroscopic consumers. This significant AA-SIR capacity is based on empirical evidence that a consumer's SIR, specific to an individual AA, reflects its diet SIR coupled with a certain degree of isotopic differences between the consumer and its diet. However, many empirical ecologists are still unfamiliar with the scope of applicability and the interpretative power of AA-SIR. To fill these knowledge gaps, we here describe a comprehensive approach to both carbon and nitrogen AA-SIR assessment focusing on two key topics: pattern in AA-isotope composition across spatial and temporal scales, and a certain variability of AA-specific isotope differences between the diet and the consumer. On this basis we review the versatile applicability of AA-SIR to improve our understanding of physiological processes as well as food web functioning, allowing us to reconstruct dominant basal dietary sources and trace their trophic transfers at the specimen and community levels. Given the insightful and opportunities of AA-SIR, we suggest future applications for the dual use of carbon and nitrogen AA-SIR to study more realistic food web structures and robust consumer niches, which are often very difficult to explain in nature.

Large herbivorous wildlife and livestock differentially influence the relative importance of different sources of energy for riverine food webs

In many regions of the world, large populations of native wildlife have declined or been replaced by livestock grazing areas and farmlands, with consequences for terrestrial-aquatic ecosystem connectivity and trophic resources supporting food webs in aquatic ecosystems. The river continuum concept (RCC) and the riverine productivity model (RPM) predict a shift of energy supplying aquatic food webs along rivers: from terrestrial inputs in low-order streams to autochthonous production in mid-sized rivers. In Afromontane-savanna landscapes, the shifting numbers of large mammalian wildlife present a physical continuum whose ecological implications for rivers is not clearly understood. Here, we studied the influence of replacing large wildlife (mainly hippos) with livestock on the fractional contribution of C3 vegetation, C4 grasses and periphyton on macroinvertebrates in the Mara River, which is an African montane-savanna river known to receive large subsidy fluxes of terrestrial organic matter and nutrients mediated by large mammalian herbivores (LMH), both wildlife and livestock, in its middle and lower reaches. Using stable carbon (δ¹³C) and nitrogen (δ¹⁵N) isotopes, we identified spatial patterns in the fractional contribution of allochthonous organic matter from C3 and C4 plants (woody vegetation and grasses, respectively) and autochthonous energy from periphyton for macroinvertebrates at various sites of the Mara River and its tributaries. Potential energy sources and invertebrates were sampled at 80 sites spanning stream orders 1 to 7, various catchment land uses (forest, agriculture and grasslands) and different loading rates of organic matter and nutrients by LMH (livestock and wildlife, i.e., hippopotamus). The fractional contribution of different sources of energy for macroinvertebrates along the river did not follow predictions of the RCC and RPM. First, the fractional contribution of C3 and C4 carbon was not related to river order or location along the fluvial continuum but to the loading of organic matter (dung) by both wildlife and livestock. Notably, C4 carbon was important for macroinvertebrates even in large river sections inhabited by hippos. Second, even in small 1st -3rd order forested streams, periphyton was a major source of energy for macroinvertebrates, and this was fostered by livestock inputs fuelling aquatic primary production throughout the river network. Importantly, our results show that replacing wildlife (hippos) with livestock shifts river systems towards greater reliance on autochthonous sources of energy through an algae-grazer pathway as opposed to reliance on allochthonous inputs of C4 carbon through a detrital pathway.