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Yu Y, Miao L, Adyel TM, Waldschläger K, Wu J, Hou J. Aquatic plastisphere: Interactions between plastics and biofilms. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2023; 322:121196. [PMID: 36736560 DOI: 10.1016/j.envpol.2023.121196] [Citation(s) in RCA: 21] [Impact Index Per Article: 10.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/30/2022] [Revised: 01/28/2023] [Accepted: 01/31/2023] [Indexed: 06/18/2023]
Abstract
Because of the high production rates, low recycling rates, and poor waste management of plastics, an increasing amount of plastic is entering the aquatic environment, where it can provide new ecological niches for microbial communities and form a so-called plastisphere. Recent studies have focused on the one-way impact of plastic substrata or biofilm communities. However, our understanding of the two-way interactions between plastics and biofilms is still limited. This review first summarizes the formation process and the co-occurrence network analysis of the aquatic plastisphere to comprehensively illustrate the succession pattern of biofilm communities and the potential consistency between keystone taxa and specific environmental behavior of the plastisphere. Furthermore, this review sheds light on mutual interactions between plastics and biofilms. Plastic properties, environmental conditions, and colonization time affect biofilm development. Meanwhile, the biofilm communities, in turn, influence the environmental behaviors of plastics, including transport, contaminant accumulation, and especially the fragmentation and degradation of plastics. Based on a systematic literature review and cross-referencing from these disciplines, the current research focus, and future challenges in exploring aquatic plastisphere development and biofilm-plastic interactions are proposed.
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Affiliation(s)
- Yue Yu
- Key Laboratory of Integrated Regulation and Resources Development on Shallow Lakes, Ministry of Education, College of Environment, Hohai University, 210098, Nanjing, People's Republic of China; Department of Civil, Environmental and Geomatic Engineering, ETH Zürich, Zurich, 8093, Switzerland
| | - Lingzhan Miao
- Key Laboratory of Integrated Regulation and Resources Development on Shallow Lakes, Ministry of Education, College of Environment, Hohai University, 210098, Nanjing, People's Republic of China.
| | - Tanveer M Adyel
- Centre for Integrative Ecology, School of Life and Environmental Sciences, Deakin University, Melbourne, VIC, 3125, Australia
| | - Kryss Waldschläger
- Hydrology and Quantitative Water Management Group, Wageningen University & Research, Wageningen, Netherlands
| | - Jun Wu
- Key Laboratory of Integrated Regulation and Resources Development on Shallow Lakes, Ministry of Education, College of Environment, Hohai University, 210098, Nanjing, People's Republic of China
| | - Jun Hou
- Key Laboratory of Integrated Regulation and Resources Development on Shallow Lakes, Ministry of Education, College of Environment, Hohai University, 210098, Nanjing, People's Republic of China
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Tarchi M, Zaaboub N, Alsubih M, Brik B, Martins MVA, Aleya L, Trabelsi L. Microalgae colonization and trace element accumulation on the plastisphere of marine plastic debris in Monastir Bay (Eastern Tunisia). ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2023; 30:32427-32451. [PMID: 36460886 DOI: 10.1007/s11356-022-23930-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/02/2022] [Accepted: 10/27/2022] [Indexed: 06/17/2023]
Abstract
In this study, we examined the toxicity potential of the epiplastic microalgal community that developed on low-density polyethylene (LD-PE) plastic debris found in two distinct regions of the Monastir Bay (Tunisia): the coast exposed to anthropogenic discharges and the open sea in front of the Kuriat Islands. Concentrations of potentially toxic elements (PTEs) accumulated in sediments and plastisphere were compared in order to determine their toxicity potential to biological life. The collected plastispheres were predominantly composed of cyanobacteria, chlorophytes, and diatoms. Diatoms display a relatively high diversity (25 species). At all stations, potentially harmful microalgae (PHM) were more abundant in the plastisphere than in seawater and the coastal zone seems to harbour increased number of potentially harmful cyanobacteria within the plastisphere. At the offshore station S1, the PHM community was dominated by the potentially harmful diatoms belonging to the genus Pseudo-nitzschia. Phormidium sp. was the main potentially harmful cyanobacterium identified in the plastisphere of S1. PTEs concentration in the plastisphere was higher than in sediment and ranking with very high contamination factors at all sites according to the sequence Pb > Cu > Cd > Ni > Zn. The highest accumulation of PTEs in the plastisphere was recorded near harbors and industrial zones with important human interference. This work shows that plastisphere can be a threat to vulnerable species not only because it can contain PHM but also because it can accumulate PTEs.
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Affiliation(s)
- Mondher Tarchi
- Marine Biodiversity Laboratory, National Institute of Marine Sciences and Technology (INSTM), 2025 Salammbo, University of Carthage, Tunis, Tunisia
| | - Noureddine Zaaboub
- Marine Environment Laboratory, National Institute of Marine Sciences and Technology (INSTM), University of Carthage, 2025 Salammbo, Tunis, Tunisia
| | - Majed Alsubih
- Department of Civil Engineering, King Khalid University, Guraiger, Abha, 62529, Kingdom of Saudi Arabia
| | - Bochra Brik
- Marine Biodiversity Laboratory, National Institute of Marine Sciences and Technology (INSTM), 2025 Salammbo, University of Carthage, Tunis, Tunisia
| | - Maria Virgínia Alves Martins
- Faculdade de Geologia, Universidade Do Estado Do Rio de Janeiro, UERJ, Av. Sao Francisco Xavier, 24, Sala 2020A, Maracana, Rio de Janeiro, RJ 20550‑013, Brazil
- GeoBioTec, Departamento de Geociencias, Campus de Santiago, Universidade de Aveiro, 3810‑193, Aveiro, Portugal
| | - Lotfi Aleya
- Laboratoire de Chrono-Environnement, UMR CNRS 6249, Université de Bourgogne Franche-Comté, La Bouloie, 25030, Besançon Cedex, France
| | - Lamia Trabelsi
- Marine Biodiversity Laboratory, National Institute of Marine Sciences and Technology (INSTM), 2025 Salammbo, University of Carthage, Tunis, Tunisia.
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Pasqualini V, Garrido M, Cecchi P, Connès C, Couté A, El Rakwe M, Henry M, Hervio-Heath D, Quilichini Y, Simonnet J, Rinnert E, Vitré T, Galgani F. Harmful algae and pathogens on plastics in three mediterranean coastal lagoons. Heliyon 2023; 9:e13654. [PMID: 36895393 PMCID: PMC9988496 DOI: 10.1016/j.heliyon.2023.e13654] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/05/2022] [Revised: 02/05/2023] [Accepted: 02/07/2023] [Indexed: 02/27/2023] Open
Abstract
Plastic is now a pervasive pollutant in all marine ecosystems. The microplastics and macroplastic debris were studied in three French Mediterranean coastal lagoons (Prevost, Biguglia and Diana lagoons), displaying different environmental characteristics. In addition, biofilm samples were analyzed over the seasons to quantify and identify microalgae communities colonizing macroplastics, and determine potentially harmful microorganisms. Results indicate low but highly variable concentrations of microplastics, in relation to the period and location of sampling. Micro-Raman spectroscopy analyses revealed that the majority of macroplastic debris corresponded to polyethylene (PE) and low-density polyethylene (LDPE), and to a far lesser extent to polypropylene (PP). The observations by Scanning Electron Microscopy of microalgae communities colonizing macroplastic debris demonstrated differences depending on the seasons, with higher amounts in spring and summer, but without any variation between lagoons and polymers. Among the Diatomophyceae, the most dominant genera were Amphora spp., Cocconeis spp., and Navicula spp.. Cyanobacteria and Dinophyceae such as Prorocentrum cordatum, a potentially toxic species, were also found sporadically. The use of Primer specific DNA amplification tools enabled us to detect potentially harmful microorganisms colonizing plastics, such as Alexandrium minutum or Vibrio spp. An additional in situ experiment performed over one year revealed an increase in the diversity of colonizing microalgae in relation to the duration of immersion for the three tested polymers PE, LDPE and polyethylene terephthalates (PET). Vibrio settled durably after two weeks of immersion, whatever the polymer. This study confirms that Mediterranean coastal lagoons are vulnerable to the presence of macroplastic debris that may passively host and transport various species, including some potentially harmful algal and bacterial microorganisms.
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Affiliation(s)
- Vanina Pasqualini
- UMR SPE CNRS - UMS Stella Mare CNRS, University of Corsica, BP 52, 20250, Corte, France
| | - Marie Garrido
- Environmental Agency of Corsica, 7 Avenue Jean Nicoli, 20250, Corte, France
| | - Philippe Cecchi
- UMR MARBEC, IRD CNRS IFREMER, University of Montpellier, CC093, 34095, Montpellier Cedex 5, France
| | - Coralie Connès
- IFREMER, Laboratoire Environnement Ressources Provence-Azur-Corse (LER/PAC), Station de Bastia, Zone Industrielle de Furiani, 20600, Bastia, France
| | - Alain Couté
- Muséum National d'Histoire Naturelle, Département RDDM, FRE 3206, USM 505, 57 rue Cuvier, 75005, Paris, France
| | - Maria El Rakwe
- IFREMER, Laboratoire Détection, Capteurs et Mesures (LDCM), Centre Bretagne, ZI de la Pointe du Diable, CS 10070, 29280, Plouzané, France
| | - Maryvonne Henry
- IFREMER, Laboratoire Environnement Ressources Provence-Azur-Corse (LER/PAC), Station de Toulon, Zone Portuaire de Brégaillon, CS 20330, 83507, La Seyne sur Mer, France
| | - Dominique Hervio-Heath
- IFREMER, Laboratoire Adaptation, Reproduction et Nutrition des Poissons (LARN), Centre Bretagne, ZI de la Pointe du Diable, CS 10070, 29280, Plouzané, France
| | - Yann Quilichini
- UMR SPE CNRS - UMS Stella Mare CNRS, University of Corsica, BP 52, 20250, Corte, France
| | - Jérémy Simonnet
- IFREMER, Laboratoire Santé, Environnement et Microbiologie (LSEM), Centre Bretagne, ZI de la Pointe du Diable, CS 10070, 29280, Plouzané, France
| | - Emmanuel Rinnert
- IFREMER, Laboratoire Cycle Géochimique et Ressources (LCG), Centre Bretagne, ZI de la Pointe du Diable, CS 10070, 29280, Plouzané, France
| | - Thomas Vitré
- IFREMER, Laboratoire Adaptation, Reproduction et Nutrition des Poissons (LARN), Centre Bretagne, ZI de la Pointe du Diable, CS 10070, 29280, Plouzané, France
| | - François Galgani
- IFREMER, Laboratoire Environnement Ressources Provence-Azur-Corse (LER/PAC), Station de Bastia, Zone Industrielle de Furiani, 20600, Bastia, France
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Xianbiao J, Baohong C, Kang W, Conghui P, Yahui G, Hui L. A new microalgae community — Epimicroplastic microalgae (EMP-MA). ALGAL RES 2023. [DOI: 10.1016/j.algal.2023.103059] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/17/2023]
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Martínez-Campos S, González-Pleiter M, Rico A, Schell T, Vighi M, Fernández-Piñas F, Rosal R, Leganés F. Time-course biofilm formation and presence of antibiotic resistance genes on everyday plastic items deployed in river waters. JOURNAL OF HAZARDOUS MATERIALS 2023; 443:130271. [PMID: 36351347 DOI: 10.1016/j.jhazmat.2022.130271] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/14/2022] [Revised: 10/17/2022] [Accepted: 10/25/2022] [Indexed: 06/16/2023]
Abstract
The plastisphere has been widely studied in the oceans; however, there is little information on how living organisms interact with the plastisphere in freshwater ecosystems, and particularly on how this interaction changes over time. We have characterized, over one year, the evolution of the eukaryotic and bacterial communities colonizing four everyday plastic items deployed in two sites of the same river with different anthropogenic impact. α-diversity analyses showed that site had a significant role in bacterial and eukaryotic diversity, with the most impacted site having higher values of the Shannon diversity index. β-diversity analyses showed that site explained most of the sample variation followed by substrate type (i.e., plastic item) and time since first colonization. In this regard, core microbiomes/biomes in each plastic at 1, 3, 6 and 12 months could be identified at genus level, giving a global overview of the evolution of the plastisphere over time. The measured concentration of antibiotics in the river water positively correlated with the abundance of antibiotic resistance genes (ARGs) on the plastics. These results provide relevant information on the temporal dynamics of the plastisphere in freshwater ecosystems and emphasize the potential contribution of plastic items to the global spread of antibiotic resistance.
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Affiliation(s)
- Sergio Martínez-Campos
- Department of Analytical Chemistry, Physical Chemistry and Chemical Engineering, University of Alcalá, Alcalá de Henares, E-28871 Madrid, Spain
| | - Miguel González-Pleiter
- Department of Biology, Faculty of Sciences, Universidad Autónoma de Madrid, Cantoblanco, E-28049 Madrid, Spain
| | - Andreu Rico
- IMDEA Water Institute, Science and Technology Campus of the Universidad de Alcalá, Av. Punto Com 2, 28805 Alcalá de Henares, Madrid, Spain; Cavanilles Institute of Biodiversity and Evolutionary Biology, Universidad de Valencia, c/ Catedrático José Beltrán 2, Paterna, 46980 Valencia, Spain
| | - Theresa Schell
- IMDEA Water Institute, Science and Technology Campus of the Universidad de Alcalá, Av. Punto Com 2, 28805 Alcalá de Henares, Madrid, Spain
| | - Marco Vighi
- IMDEA Water Institute, Science and Technology Campus of the Universidad de Alcalá, Av. Punto Com 2, 28805 Alcalá de Henares, Madrid, Spain
| | - Francisca Fernández-Piñas
- Department of Biology, Faculty of Sciences, Universidad Autónoma de Madrid, Cantoblanco, E-28049 Madrid, Spain; Centro de Investigación en Biodiversidad y Cambio Global (CIBC-UAM), Universidad Autónoma de Madrid, C Darwin 2, 28049 Madrid, Spain
| | - Roberto Rosal
- Department of Analytical Chemistry, Physical Chemistry and Chemical Engineering, University of Alcalá, Alcalá de Henares, E-28871 Madrid, Spain
| | - Francisco Leganés
- Department of Biology, Faculty of Sciences, Universidad Autónoma de Madrid, Cantoblanco, E-28049 Madrid, Spain; Centro de Investigación en Biodiversidad y Cambio Global (CIBC-UAM), Universidad Autónoma de Madrid, C Darwin 2, 28049 Madrid, Spain.
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Li J, Yu C, Liu Z, Wang Y, Wang F. Microplastic accelerate the phosphorus-related metabolism of bacteria to promote the decomposition of methylphosphonate to methane. THE SCIENCE OF THE TOTAL ENVIRONMENT 2023; 858:160020. [PMID: 36356736 DOI: 10.1016/j.scitotenv.2022.160020] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/11/2022] [Revised: 10/08/2022] [Accepted: 11/03/2022] [Indexed: 06/16/2023]
Abstract
Microplastic (MP) contaminants in marine water have become a global public health concern because of their persistence and potentially adverse effects on organisms. MP can affect the growth and metabolism of marine microorganisms and further impact the microbial environmental functions. The molecular impact mechanisms of MP on specific functional microbes with the capability of decomposing methylphosphonate (MPn) to release methane (CH4) in oxygenated water have rarely been reported upon. Herein, we investigated the effects of MP on microbes and concomitant methanogenesis via the microbial degradation of MPn. Furthermore, the specific perturbation was revealed at the molecular level combined with transcriptomics and metabolomics. The results showed that intracellular phosphorus utilization by MPn-degrading strain Burkholderia sp. HQL1813 was enhanced by accelerating the catabolism of MPn. Phosphorus transport-related genes (phnG-M, pstSCAB, phnCDE) were upregulated in the MP exposure groups. Amino acid metabolism, the phosphotransferase system and nucleotide metabolism were also perturbed after MP exposure. Notably, released CH4 increased by 24 %, 29 % and 14 % in the exposure group. In addition, the responses of the strain were dose-independent with increasing MP doses. These findings are beneficial for clarifying the effect of MP on specific functional microbes at the molecular level and their degradation of CH4 by MPn.
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Affiliation(s)
- Junhong Li
- School of Energy & Environmental Engineering, University of Science and Technology Beijing, 30 Xueyuan Road, Haidian District, 100083 Beijing, China; School of Environment, Beijing Normal University, 19 Xinjiekouwai Street, 100875 Beijing, China
| | - Chan Yu
- State Key Laboratory of Biocatalysis and Enzyme Engineering, School of Life Sciences, Hubei University, 430062 Wuhan, China
| | - Zeqin Liu
- State Key Laboratory of Biocatalysis and Enzyme Engineering, School of Life Sciences, Hubei University, 430062 Wuhan, China
| | - Yan Wang
- School of Energy & Environmental Engineering, University of Science and Technology Beijing, 30 Xueyuan Road, Haidian District, 100083 Beijing, China
| | - Fei Wang
- School of Environment, Beijing Normal University, 19 Xinjiekouwai Street, 100875 Beijing, China.
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Cui Z, Li R, Li F, Jin L, Wu H, Cheng C, Ma Y, Wang Z, Wang Y. Structural characteristics and diversity of the rhizosphere bacterial communities of wild Fritillaria przewalskii Maxim. in the northeastern Tibetan Plateau. Front Microbiol 2023; 14:1070815. [PMID: 36876117 PMCID: PMC9981654 DOI: 10.3389/fmicb.2023.1070815] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/15/2022] [Accepted: 02/01/2023] [Indexed: 02/19/2023] Open
Abstract
Introduction Fritillaria przewalskii Maxim. is a Chinese endemic species with high medicinal value distributed in the northeastern part of the Tibetan Plateau. F. przewalskii root-associated rhizosphere bacterial communities shaped by soil properties may maintain the stability of soil structure and regulate F. przewalskii growth, but the rhizosphere bacterial community structure of wild F. przewalskii from natural populations is not clear. Methods In the current study, soil samples from 12 sites within the natural range of wild F. przewalskii were collected to investigate the compositions of bacterial communities via high-throughput sequencing of 16S rRNA genes and multivariate statistical analysis combined with soil properties and plant phenotypic characteristics. Results Bacterial communities varied between rhizosphere and bulk soil, and also between sites. Co-occurrence networks were more complex in rhizosphere soil (1,169 edges) than in bulk soil (676 edges). There were differences in bacterial communities between regions, including diversity and composition. Proteobacteria (26.47-37.61%), Bacteroidetes (10.53-25.22%), and Acidobacteria (10.45-23.54%) were the dominant bacteria, and all are associated with nutrient cycling. In multivariate statistical analysis, both soil properties and plant phenotypic characteristics were significantly associated with the bacterial community (p < 0.05). Soil physicochemical properties accounted for most community differences, and pH was a key factor (p < 0.01). Interestingly, when the rhizosphere soil environment remained alkaline, the C and N contents were lowest, as was the biomass of the medicinal part bulb. This might relate to the specific distribution of genera, such as Pseudonocardia, Ohtaekwangia, Flavobacterium (relative abundance >0.01), which all have significantly correlated with the biomass of F. przewalskii (p < 0.05). Discussion F. przewalskii is evidently averse to alkaline soil with high potassium contents, but this requires future verification. The results of the present study may provide theoretical guidance and new insights for the cultivation and domestication of F. przewalskii.
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Affiliation(s)
- Zhijia Cui
- College of Pharmacy, Gansu University of Chinese Medicine, Lanzhou, Gansu, China.,Northwest Collaborative Innovation Center for Traditional Chinese Medicine Co-Constructed by Gansu Province & MOE of PRC, Lanzhou, Gansu, China
| | - Ran Li
- College of Pharmacy, Gansu University of Chinese Medicine, Lanzhou, Gansu, China
| | - Fan Li
- College of Pharmacy, Gansu University of Chinese Medicine, Lanzhou, Gansu, China
| | - Ling Jin
- College of Pharmacy, Gansu University of Chinese Medicine, Lanzhou, Gansu, China.,Northwest Collaborative Innovation Center for Traditional Chinese Medicine Co-Constructed by Gansu Province & MOE of PRC, Lanzhou, Gansu, China
| | - Haixu Wu
- College of Pharmacy, Gansu University of Chinese Medicine, Lanzhou, Gansu, China
| | - Chunya Cheng
- College of Pharmacy, Gansu University of Chinese Medicine, Lanzhou, Gansu, China
| | - Yi Ma
- College of Pharmacy, Gansu University of Chinese Medicine, Lanzhou, Gansu, China.,Northwest Collaborative Innovation Center for Traditional Chinese Medicine Co-Constructed by Gansu Province & MOE of PRC, Lanzhou, Gansu, China
| | - Zhenheng Wang
- College of Pharmacy, Gansu University of Chinese Medicine, Lanzhou, Gansu, China.,Northwest Collaborative Innovation Center for Traditional Chinese Medicine Co-Constructed by Gansu Province & MOE of PRC, Lanzhou, Gansu, China
| | - Yuanyuan Wang
- College of Pharmacy, Gansu University of Chinese Medicine, Lanzhou, Gansu, China
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Gomez NCF, Onda DFL. Potential of sediment bacterial communities from Manila Bay (Philippines) to degrade low-density polyethylene (LDPE). Arch Microbiol 2022; 205:38. [PMID: 36565350 DOI: 10.1007/s00203-022-03366-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/02/2022] [Revised: 02/02/2022] [Accepted: 12/02/2022] [Indexed: 12/25/2022]
Abstract
The persistence of plastics and its effects in different environments where they accumulate, particularly in coastal areas, is of serious concern. These plastics exhibit signs of degradation, possibly mediated by microorganisms. In this study, we investigated the potential of sediment microbial communities from Manila Bay, Philippines, which has a severe plastics problem, to degrade low-density polyethylene (LDPE). Plastics in selected sites were quantified and sediment samples from sites with the lowest and highest plastic accumulation were collected. These sediments were then introduced and incubated with LDPE in vitro for a period of 91 days. Fourier transform infrared spectroscopy detected the appearance of carbonyl and vinyl products on the plastic surface, indicating structural surface modifications attributed to polymer degradation. Communities attached to the plastics were profiled using high-throughput sequencing of the V4-V5 region of the 16S rRNA gene. Members of the phylum Proteobacteria dominated the plastic surface throughout the experiment. Several bacterial taxa associated with hydrocarbon degradation were also enriched, with some taxa positively correlating with the biodegradation indices, suggesting potential active roles in the partial biodegradation of plastics. Other taxa were also present, which might be consuming by-products or providing nourishment for other groups, indicating synergy in utilizing the plastic as the main carbon source and creation of a microenvironment within the plastics biofilm. This study showed that sediment microbes from Manila Bay may have naturally occurring microbial groups potentially capable of partially degrading plastics, supporting previous studies that the biodegradation potential for plastics is ubiquitously present in marine microbial assemblages.
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Affiliation(s)
- Norchel Corcia F Gomez
- Microbial Oceanography Laboratory, The Marine Science Institute, University of the Philippines Diliman, Velasquez St., 1101, Quezon City, Philippines
| | - Deo Florence L Onda
- Microbial Oceanography Laboratory, The Marine Science Institute, University of the Philippines Diliman, Velasquez St., 1101, Quezon City, Philippines.
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Wicaksono JA, Purwadaria T, Yulandi A, Tan WA. Bacterial dynamics during the burial of starch-based bioplastic and oxo-low-density-polyethylene in compost soil. BMC Microbiol 2022; 22:309. [PMID: 36536283 PMCID: PMC9764577 DOI: 10.1186/s12866-022-02729-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2022] [Accepted: 12/08/2022] [Indexed: 12/24/2022] Open
Abstract
BACKGROUND Plastic waste accumulation is one of the main ecological concerns in the past decades. A new generation of plastics that are easier to degrade in the environment compared to conventional plastics, such as starch-based bioplastics and oxo-biodegradable plastics, is perceived as a solution to this issue. However, the fate of these materials in the environment are unclear, and less is known about how their presence affect the microorganisms that may play a role in their biodegradation. In this study, we monitored the dynamics of bacterial community in soil upon introduction of commercial carrier bags claimed as biodegradable: cassava starch-based bioplastic and oxo-low-density polyethylene (oxo-LDPE). Each type of plastic bag was buried separately in compost soil and incubated for 30, 60, 90, and 120 days. Following incubation, soil pH and temperature as well as the weight of remaining plastics were measured. Bacterial diversity in soil attached to the surface of remaining plastics was analyzed using Illumina high-throughput sequencing of the V3-V4 region of 16SrRNA gene. RESULTS After 120 days, the starch-based bioplastic weight has decreased by 74%, while the oxo-LDPE remained intact with only 3% weight reduction. The bacterial composition in soil fluctuated over time with or without the introduction of either type of plastic. While major bacterial phyla remained similar for all treatment in this study, different types of plastics led to different soil bacterial community structure. None of these bacteria were abundant continuously, but rather they emerged at specific time points. The introduction of plastics into soil increased not only the population of bacteria known for their ability to directly utilize plastic component for their growth, but also the abundance of those that may interact with direct degraders. Bacterial groups that are involved in nitrogen cycling also arose throughout burial. CONCLUSIONS The introduction of starch-based bioplastic and oxo-LDPE led to contrasting shift in soil bacterial population overtime, which may determine their fate in the environment.
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Affiliation(s)
- Joshua Abednego Wicaksono
- grid.443450.20000 0001 2288 786XMaster of Biotechnology Program, Faculty of Biotechnology, Atma Jaya Catholic University of Indonesia, BSD Campus, Jalan Raya Cisauk – Lapan no. 10, Tangerang, Indonesia
| | - Tresnawati Purwadaria
- grid.443450.20000 0001 2288 786XBiotechnology Program, Faculty of Biotechnology, Atma Jaya Catholic University of Indonesia, BSD Campus, Jalan Raya Cisauk – Lapan no. 10, Tangerang, Indonesia
| | - Adi Yulandi
- grid.443450.20000 0001 2288 786XBiotechnology Program, Faculty of Biotechnology, Atma Jaya Catholic University of Indonesia, BSD Campus, Jalan Raya Cisauk – Lapan no. 10, Tangerang, Indonesia
| | - Watumesa Agustina Tan
- grid.443450.20000 0001 2288 786XBiotechnology Program, Faculty of Biotechnology, Atma Jaya Catholic University of Indonesia, BSD Campus, Jalan Raya Cisauk – Lapan no. 10, Tangerang, Indonesia
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Conan P, Philip L, Ortega-Retuerta E, Odobel C, Duran C, Pandin C, Giraud C, Meistertzheim AL, Barbe V, Ter Hall A, Pujo-Pay M, Ghiglione JF. Evidence of coupled autotrophy and heterotrophy on plastic biofilms and its influence on surrounding seawater. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2022; 315:120463. [PMID: 36272613 DOI: 10.1016/j.envpol.2022.120463] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/21/2022] [Revised: 09/22/2022] [Accepted: 10/15/2022] [Indexed: 06/16/2023]
Abstract
We measured phytoplankton primary production and heterotrophic bacterial activities on microplastics and seawater in the Northwestern Mediterranean Sea during two 3-month spring periods over 2 consecutive years. Microorganisms growing on a 5 mm diameter low density polyethylene films (LDPE; 200 μm thick) faced two contrasting conditions depending on the year. Spring 2018 was characterized by consistent nutrient inputs and bloom development. In spring 2019, nutrient inputs and bloom were low. For the first time, we observed a clear coupling between primary production and heterotrophic prokaryote production on microplastics during both years, but with different intensity between years that reflected the crucial role of the trophic environmental conditions (nutrient supply) in shaping microbial activities on plastics. We found that high primary production on plastics could support the whole (net autotrophy) or the majority of the bacterial carbon demand needed for heterotrophic activities, supplemented by other carbon sources if surrounding waters are highly productive. We propose that microbial activity on plastics influences the microbial community in the surrounding seawater, especially when the environmental conditions are less favorable. An illustrative image of the role of plastics in the environment could be that of an inverter in an electrical circuit that mitigates both positive and negative variations. Our results highlight the potential role of the plastisphere in shaping biogeochemical cycles in the context of increasing amounts of plastic particles in the marine environment.
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Affiliation(s)
- Pascal Conan
- Sorbonne Université, CNRS LOMIC - UMR 7621, Laboratoire d'Océanographie Microbienne, 1 Avenue Pierre Fabre, 66650, Banyuls sur Mer, France; Sorbonne Université, CNRS OSU STAMAR - UAR2017, 4 Place Jussieu, 75252, Paris cedex 05, France.
| | - Léna Philip
- Sorbonne Université, CNRS LOMIC - UMR 7621, Laboratoire d'Océanographie Microbienne, 1 Avenue Pierre Fabre, 66650, Banyuls sur Mer, France; SAS Plastic@Sea, Sorbonne Université (UPMC), CNRS LOMIC - UMR 7621, Laboratoire d'Océanographie Microbienne, 1 Avenue Pierre Fabre, 66650, Banyuls sur Mer, France
| | - Eva Ortega-Retuerta
- Sorbonne Université, CNRS LOMIC - UMR 7621, Laboratoire d'Océanographie Microbienne, 1 Avenue Pierre Fabre, 66650, Banyuls sur Mer, France
| | - Charlène Odobel
- Sorbonne Université, CNRS LOMIC - UMR 7621, Laboratoire d'Océanographie Microbienne, 1 Avenue Pierre Fabre, 66650, Banyuls sur Mer, France
| | - Clélia Duran
- Sorbonne Université, CNRS LOMIC - UMR 7621, Laboratoire d'Océanographie Microbienne, 1 Avenue Pierre Fabre, 66650, Banyuls sur Mer, France
| | - Caroline Pandin
- Sorbonne Université, CNRS LOMIC - UMR 7621, Laboratoire d'Océanographie Microbienne, 1 Avenue Pierre Fabre, 66650, Banyuls sur Mer, France
| | - Carolane Giraud
- Sorbonne Université, CNRS LOMIC - UMR 7621, Laboratoire d'Océanographie Microbienne, 1 Avenue Pierre Fabre, 66650, Banyuls sur Mer, France; CNRS, UMR 9220 ENTROPIE, Ifremer (LEAD-NC), IRD, Univ Nouvelle-Calédonie, Univ La Réunion, Nouméa, New Caledonia
| | - Anne-Leila Meistertzheim
- SAS Plastic@Sea, Sorbonne Université (UPMC), CNRS LOMIC - UMR 7621, Laboratoire d'Océanographie Microbienne, 1 Avenue Pierre Fabre, 66650, Banyuls sur Mer, France
| | - Valérie Barbe
- Génomique Métabolique, Genoscope, Institut François Jacob, CEA, CNRS, Univ Evry, Université Paris-Saclay, 91057, Evry, France
| | - Alexandra Ter Hall
- CNRS, Université de Toulouse, Laboratoire des Interactions Moléculaires et Réactivité Chimique et Photochimique (IMRCP), UMR, 5623, Toulouse, France
| | - Mireille Pujo-Pay
- Sorbonne Université, CNRS LOMIC - UMR 7621, Laboratoire d'Océanographie Microbienne, 1 Avenue Pierre Fabre, 66650, Banyuls sur Mer, France
| | - Jean-François Ghiglione
- Sorbonne Université, CNRS LOMIC - UMR 7621, Laboratoire d'Océanographie Microbienne, 1 Avenue Pierre Fabre, 66650, Banyuls sur Mer, France
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61
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From microbes to ecosystems: a review of the ecological effects of biodegradable plastics. Emerg Top Life Sci 2022; 6:423-433. [PMID: 36069649 DOI: 10.1042/etls20220015] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/29/2022] [Revised: 08/23/2022] [Accepted: 08/23/2022] [Indexed: 12/30/2022]
Abstract
Biodegradable plastics have been proposed as a potential solution to plastic pollution, as they can be biodegraded into their elemental components by microbial action. However, the degradation rate of biodegradable plastics is highly variable across environments, leading to the potential for accumulation of plastic particles, chemical co-contaminants and/or degradation products. This paper reviews the toxicological effects of biodegradable plastics on species and ecosystems, and contextualises these impacts with those previously reported for conventional polymers. While the impacts of biodegradable plastics and their co-contaminants across levels of biological organisation are poorly researched compared with conventional plastics, evidence suggests that individual-level effects could be broadly similar. Where differences in the associated toxicity may arise is due to the chemical structure of biodegradable polymers which should facilitate enzymatic depolymerisation and the utilisation of the polymer carbon by the microbial community. The input of carbon can alter microbial composition, causing an enrichment of carbon-degrading bacteria and fungi, which can have wider implications for carbon and nitrogen dynamics. Furthermore, there is the potential for toxic degradation products to form during biodegradation, however understanding the environmental concentration and effects of degradation products are lacking. As global production of biodegradable polymers continues to increase, further evaluation of their ecotoxicological effects on organisms and ecosystem function are required.
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Pedrotti ML, de Figueiredo Lacerda AL, Petit S, Ghiglione JF, Gorsky G. Vibrio spp and other potential pathogenic bacteria associated to microfibers in the North-Western Mediterranean Sea. PLoS One 2022; 17:e0275284. [PMID: 36449472 PMCID: PMC9710791 DOI: 10.1371/journal.pone.0275284] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/24/2022] [Accepted: 09/13/2022] [Indexed: 12/02/2022] Open
Abstract
Microfibers, whether synthetic or natural, have increased dramatically in the environment, becoming the most common type of particles in the ocean, and exposing aquatic organisms to multiple negative impacts. Using an approach combining morphology (scanning electron microscopy-SEM) and molecular taxonomy (High-Throughput DNA Sequencing- HTS), we investigated the bacterial composition from floating microfibers (MFs) collected in the northwestern Mediterranean Sea. The average number of bacteria in 100 μm2 on the surface of a fiber is 8 ± 5.9 cells; by extrapolating it to a whole fiber, this represents 2663 ± 1981 bacteria/fiber. Attached bacterial communities were dominated by Alteromonadales, Rhodobacterales, and Vibrionales, including the potentially human/animal pathogen Vibrio parahaemolyticus. This study reveals a high rate of bacterial colonization on MFs, and shows that these particles can host numerous bacterial species, including putative pathogens. Even if we cannot confirm its pathogenicity based only on the taxonomy, this is the first description of such pathogenic Vibrio living attached to MFs in the Mediterranean Sea. The identification of MFs colonizers is valuable in assessing health risks, as their presence can be a threat to bathing and seafood consumption. Considering that MFs can serve as vector for potentially pathogenic microorganisms and other pollutants throughout the ocean, this type of pollution can have both ecological and economic consequences.
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Affiliation(s)
- Maria Luiza Pedrotti
- Laboratoire d’Océanographie de Villefranche sur mer (LOV), UPMC Université Paris 06, CNRS UMR 7093, Sorbonne Université, Villefranche sur Mer, France
- * E-mail:
| | - Ana Luzia de Figueiredo Lacerda
- Laboratoire d’Océanographie de Villefranche sur mer (LOV), UPMC Université Paris 06, CNRS UMR 7093, Sorbonne Université, Villefranche sur Mer, France
| | - Stephanie Petit
- Laboratoire d’Océanographie de Villefranche sur mer (LOV), UPMC Université Paris 06, CNRS UMR 7093, Sorbonne Université, Villefranche sur Mer, France
| | - Jean François Ghiglione
- Laboratoire d’Océanographie Microbienne, UMR 7621, Observatoire Océanologique de Banyuls, Sorbonne Université, CNRS, Banyuls-sur-Mer, France
| | - Gabriel Gorsky
- Laboratoire d’Océanographie de Villefranche sur mer (LOV), UPMC Université Paris 06, CNRS UMR 7093, Sorbonne Université, Villefranche sur Mer, France
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63
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Eronen-Rasimus EL, Näkki PP, Kaartokallio HP. Degradation Rates and Bacterial Community Compositions Vary among Commonly Used Bioplastic Materials in a Brackish Marine Environment. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2022; 56:15760-15769. [PMID: 36269217 PMCID: PMC9671047 DOI: 10.1021/acs.est.2c06280] [Citation(s) in RCA: 17] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/29/2022] [Revised: 10/11/2022] [Accepted: 10/11/2022] [Indexed: 05/03/2023]
Abstract
Plastic pollution threatens both terrestrial and aquatic ecosystems. As a result of the pressures of replacing oil-based materials and reducing the accumulation of litter in the environment, the use of bioplastics is increasing, despite little being known about their accurate biodegradation in natural conditions. Here, we investigated the weight attrition and degradation behavior of four different bioplastic materials compared to conventional oil-based polyethylene during a 1-year in situ incubation in the brackish Baltic Sea and in controlled 1 month biodegradation experiments in the laboratory. Bacterial communities were also investigated to verify whether putative plastic-degrading bacteria are enriched on bioplastics. Poly-l-lactic acid showed no signs of degradation, whereas poly(3-hydroxybutyrate/3-hydroxyvalerate) (PHB/HV), plasticized starch (PR), and cellulose acetate (CA) degraded completely or almost completely during 1-year in situ incubations. In accordance, bacterial taxa potentially capable of using complex carbon substrates and belonging, e.g., to class Gammaproteobacteria were significantly enriched on PHB/HV, PR, and CA. An increase in gammaproteobacterial abundance was also observed in the biodegradation experiments. The results show substantial differences in the persistence and biodegradation rates among bioplastics, thus highlighting the need for carefully selecting materials for applications with risk of becoming marine litter.
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Affiliation(s)
- Eeva L. Eronen-Rasimus
- Department
of Microbiology, University of Helsinki, Viikinkaari 9, 00790 Helsinki, Finland
- Marine
Research Centre, Finnish Environment Institute, Agnes Sjöbergin katu 2, 00790 Helsinki, Finland
| | - Pinja P. Näkki
- Marine
Research Centre, Finnish Environment Institute, Agnes Sjöbergin katu 2, 00790 Helsinki, Finland
| | - Hermanni P. Kaartokallio
- Marine
Research Centre, Finnish Environment Institute, Agnes Sjöbergin katu 2, 00790 Helsinki, Finland
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64
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Védie E, Barry-Martinet R, Senez V, Berglin M, Stenlund P, Brisset H, Bressy C, Briand JF. Influence of Sharklet-Inspired Micropatterned Polymers on Spatio-Temporal Variations of Marine Biofouling. Macromol Biosci 2022; 22:e2200304. [PMID: 36153836 DOI: 10.1002/mabi.202200304] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2022] [Revised: 09/07/2022] [Indexed: 12/25/2022]
Abstract
This article aims to show the influence of surface characteristics (microtopography, chemistry, mechanical properties) and seawater parameters on the settlement of marine micro- and macroorganisms. Polymers with nine microtopographies, three distinct mechanical properties, and wetting characteristics are immersed for one month into two contrasting coastal sites (Toulon and Kristineberg Center) and seasons (Winter and Summer). Influence of microtopography and chemistry on wetting is assessed through static contact angle and captive air bubble measurements over 3-weeks immersion in artificial seawater. Microscopic analysis, quantitative flow cytometry, metabarcoding based on the ribulose biphosphate carboxylase (rbcL) gene amplification, and sequencing are performed to characterize the settled microorganisms. Quantification of macrofoulers is done by evaluating the surface coverage and the type of organism. It is found that for long static in situ immersion, mechanical properties and non-evolutive wettability have no major influence on both abundance and diversity of biofouling assemblages, regardless of the type of organisms. The apparent contradiction with previous results, based on model organisms, may be due to the huge diversity of marine environments, both in terms of taxa and their size. Evolutive wetting properties with wetting switching back and forth over time have shown to strongly reduce the colonization by macrofoulers.
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Affiliation(s)
- Elora Védie
- Laboratoire MAPIEM, E.U. 4323, SeaTech Ecole d'Ingénieur, Université de Toulon, CS 60584, Toulon, 83041 Cedex 9, France
| | - Raphaëlle Barry-Martinet
- Laboratoire MAPIEM, E.U. 4323, SeaTech Ecole d'Ingénieur, Université de Toulon, CS 60584, Toulon, 83041 Cedex 9, France
| | - Vincent Senez
- Univ. Lille, CNRS, Inserm, CHU Lille, UMR9020-U1277 - CANTHER - Cancer Heterogeneity Plasticity and Resistance to Therapies, Lille, F-59000, France
| | - Mattias Berglin
- RISE Research Institutes of Sweden AB, Arvid Wallgrens backe 20, Göteborg, SE-413 46, Sweden
| | - Patrik Stenlund
- RISE Research Institutes of Sweden AB, Arvid Wallgrens backe 20, Göteborg, SE-413 46, Sweden
| | - Hugues Brisset
- Laboratoire MAPIEM, E.U. 4323, SeaTech Ecole d'Ingénieur, Université de Toulon, CS 60584, Toulon, 83041 Cedex 9, France
| | - Christine Bressy
- Laboratoire MAPIEM, E.U. 4323, SeaTech Ecole d'Ingénieur, Université de Toulon, CS 60584, Toulon, 83041 Cedex 9, France
| | - Jean-François Briand
- Laboratoire MAPIEM, E.U. 4323, SeaTech Ecole d'Ingénieur, Université de Toulon, CS 60584, Toulon, 83041 Cedex 9, France
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65
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Yu X, Zhang Y, Tan L, Han C, Li H, Zhai L, Ma W, Li C, Lu X. Microplastisphere may induce the enrichment of antibiotic resistance genes on microplastics in aquatic environments: A review. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2022; 310:119891. [PMID: 35934152 DOI: 10.1016/j.envpol.2022.119891] [Citation(s) in RCA: 19] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/29/2022] [Revised: 07/19/2022] [Accepted: 07/31/2022] [Indexed: 06/15/2023]
Abstract
Microplastics have been proven to be hotspots of bacterial pathogens and antibiotic resistance genes (ARGs). The enrichment of ARGs in microplastisphere, the specific niche for diverse microbial communities attached to the surface of microplastic, has attracted worldwide attention. By collecting 477 pairs of ARG abundance data belonging to 26 ARG types, based on the standardized mean difference (SMD) under the random effect model, we have performed the first meta-analysis of the ARG enrichment on microplastics in aquatic environments in order to quantitatively elucidate the enrichment effect, with comparison of non-microplastic materials. It was found that ARGs enriched on the microplastics were more abundant than that on the inorganic substrates (SMD = 0.26) and natural water environments (SMD = 0.10), but lower abundant than that on the natural organic substrates (SMD = -0.52). Furthermore, microplastics in freshwater tended to have a higher degree of ARG enrichment than those in saline water and sewage. The biofilm formation stage, structure, and component of microplastisphere may play a significant role in the enrichment of ARGs.
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Affiliation(s)
- Xue Yu
- Tianjin International Joint Research Center for Environmental Biogeochemical Technology and Tianjin Key Laboratory of Environmental Technology for Complex Trans-Media Pollution, College of Environmental Science and Engineering, Nankai University, Tianjin, 300350, China
| | - Ying Zhang
- School of Environmental Science and Engineering, Tianjin University, China
| | - Lu Tan
- Agro-Environmental Protection Institute, Ministry of Agriculture and Rural Affairs, Tianjin, 300191, China
| | - Chenglong Han
- Tianjin International Joint Research Center for Environmental Biogeochemical Technology and Tianjin Key Laboratory of Environmental Technology for Complex Trans-Media Pollution, College of Environmental Science and Engineering, Nankai University, Tianjin, 300350, China
| | - Haixiao Li
- Tianjin International Joint Research Center for Environmental Biogeochemical Technology and Tianjin Key Laboratory of Environmental Technology for Complex Trans-Media Pollution, College of Environmental Science and Engineering, Nankai University, Tianjin, 300350, China
| | - Lifang Zhai
- Tianjin International Joint Research Center for Environmental Biogeochemical Technology and Tianjin Key Laboratory of Environmental Technology for Complex Trans-Media Pollution, College of Environmental Science and Engineering, Nankai University, Tianjin, 300350, China
| | - Weiqi Ma
- Tianjin International Joint Research Center for Environmental Biogeochemical Technology and Tianjin Key Laboratory of Environmental Technology for Complex Trans-Media Pollution, College of Environmental Science and Engineering, Nankai University, Tianjin, 300350, China
| | - Chengtao Li
- College of Environmental Science and Engineering, Shaanxi University of Science & Technology, Xi'an, 710021, China
| | - Xueqiang Lu
- Tianjin International Joint Research Center for Environmental Biogeochemical Technology and Tianjin Key Laboratory of Environmental Technology for Complex Trans-Media Pollution, College of Environmental Science and Engineering, Nankai University, Tianjin, 300350, China.
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66
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Cheng J, Eyheraguibel B, Jacquin J, Pujo-Pay M, Conan P, Barbe V, Hoypierres J, Deligey G, Halle AT, Bruzaud S, Ghiglione JF, Meistertzheim AL. Biodegradability under marine conditions of bio-based and petroleum-based polymers as substitutes of conventional microparticles. Polym Degrad Stab 2022. [DOI: 10.1016/j.polymdegradstab.2022.110159] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/14/2022]
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67
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Zadjelovic V, Erni-Cassola G, Obrador-Viel T, Lester D, Eley Y, Gibson MI, Dorador C, Golyshin PN, Black S, Wellington EMH, Christie-Oleza JA. A mechanistic understanding of polyethylene biodegradation by the marine bacterium Alcanivorax. JOURNAL OF HAZARDOUS MATERIALS 2022; 436:129278. [PMID: 35739790 DOI: 10.1016/j.jhazmat.2022.129278] [Citation(s) in RCA: 32] [Impact Index Per Article: 10.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/22/2021] [Revised: 05/19/2022] [Accepted: 05/30/2022] [Indexed: 06/15/2023]
Abstract
Polyethylene (PE) is one of the most recalcitrant carbon-based synthetic materials produced and, currently, the most ubiquitous plastic pollutant found in nature. Over time, combined abiotic and biotic processes are thought to eventually breakdown PE. Despite limited evidence of biological PE degradation and speculation that hydrocarbon-degrading bacteria found within the plastisphere is an indication of biodegradation, there is no clear mechanistic understanding of the process. Here, using high-throughput proteomics, we investigated the molecular processes that take place in the hydrocarbon-degrading marine bacterium Alcanivorax sp. 24 when grown in the presence of low density PE (LDPE). As well as efficiently utilising and assimilating the leachate of weathered LDPE, the bacterium was able to reduce the molecular weight distribution (Mw from 122 to 83 kg/mol) and overall mass of pristine LDPE films (0.9 % after 34 days of incubation). Most interestingly, Alcanivorax acquired the isotopic signature of the pristine plastic and induced an extensive array of metabolic pathways for aliphatic compound degradation. Presumably, the primary biodegradation of LDPE by Alcanivorax sp. 24 is possible via the production of extracellular reactive oxygen species as observed both by the material's surface oxidation and the measurement of superoxide in the culture with LDPE. Our findings confirm that hydrocarbon-biodegrading bacteria within the plastisphere may in fact have a role in degrading PE.
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Affiliation(s)
- Vinko Zadjelovic
- School of Life Sciences, University of Warwick, Coventry CV4 7AL, UK.
| | - Gabriel Erni-Cassola
- School of Life Sciences, University of Warwick, Coventry CV4 7AL, UK; Program Man-Society-Environment (MGU), University of Basel, 4051 Basel, Switzerland
| | - Theo Obrador-Viel
- Department of Biology, University of the Balearic Islands, Palma 07122, Spain
| | - Daniel Lester
- Polymer Characterisation Research Technology Platform, University of Warwick, Coventry CV4 7AL, UK
| | - Yvette Eley
- School of Geography, Earth and Environmental Sciences, University of Birmingham, Edgbaston B15 2TT, UK
| | - Matthew I Gibson
- Department of Chemistry, University of Warwick, Coventry CV4 7AL, UK
| | - Cristina Dorador
- Laboratorio de Complejidad Microbiana y Ecología Funcional, Instituto Antofagasta, Universidad de Antofagasta, Chile; Departamento de Biotecnología, Facultad de Ciencias del Mar y Recursos Biológicos, Universidad de Antofagasta Angamos 601, Antofagasta, Chile; Centre for Biotechnology & Bioengineering (CeBiB) Santiago, Chile
| | - Peter N Golyshin
- Centre for Environmental Biotechnology, School of Natural Sciences, Bangor University, Bangor LL57 2UW, UK
| | - Stuart Black
- Department of Geography and Environmental Science, University of Reading, UK
| | | | - Joseph A Christie-Oleza
- School of Life Sciences, University of Warwick, Coventry CV4 7AL, UK; Department of Biology, University of the Balearic Islands, Palma 07122, Spain.
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68
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Zhang L, Lai JL, Zhang Y, Luo XG, Li ZG. Degradation of Uranium-Contaminated Decontamination Film by UV Irradiation and Microbial Biodegradation. MICROBIAL ECOLOGY 2022; 84:439-450. [PMID: 34554284 DOI: 10.1007/s00248-021-01862-0] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/18/2021] [Accepted: 09/02/2021] [Indexed: 06/13/2023]
Abstract
This research provides a complete degradation scheme for acrylic copolymer/cellulose acetate butyrate peelable decontamination films. This study analyzed the removal efficiency of uranium by peelable decontamination film. More importantly, the degradability of the films was evaluated by a combined treatment with UV radiation and microbial biodegradation. The results showed that UV radiation would rupture the surface of the decontamination films, which leaded the weight-average molecular weight decreased by 55.3% and number-average molecular weight decreased by 75.83%. Additionally, the microbial flora induced light-degradable decontamination film weight-average molecular weight and number-average molecular weight decreased by 9.3% and 30.73%, respectively. 16S rRNA microbial diversity analysis indicated that Pantoea, Xylella, Cronobacter, and Olivibacter were the major degrading bacteria genera. Among them, 4 key strains that can be stripped of decontamination films have been isolated and identified from the dominant degrading bacteria group. The results show that UV radiation combined with microbial flora can achieve rapid degradation of the decontamination films.
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Affiliation(s)
- Li Zhang
- School of Life Science and Engineering, Southwest University of Science and Technology, Mianyang, 621010, China
| | - Jin-Long Lai
- State Key Laboratory of NBC Protection for Civilian, Beijing, 102205, China
- Engineering Research Center of Biomass Materials, Ministry of Education of, SWUST, 621010, Mianyang, China
| | - Yu Zhang
- School of Life Science and Engineering, Southwest University of Science and Technology, Mianyang, 621010, China.
| | - Xue-Gang Luo
- School of Life Science and Engineering, Southwest University of Science and Technology, Mianyang, 621010, China
| | - Zhan-Guo Li
- State Key Laboratory of NBC Protection for Civilian, Beijing, 102205, China
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69
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An In Situ Study to Understand Community Structure of Estuarine Microbes on the Plastisphere. Microorganisms 2022; 10:microorganisms10081543. [PMID: 36013961 PMCID: PMC9415314 DOI: 10.3390/microorganisms10081543] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/2022] [Revised: 07/19/2022] [Accepted: 07/19/2022] [Indexed: 02/01/2023] Open
Abstract
Microplastics are defined as pieces of plastic that are smaller than 5 mm and they are now considered one of the most abundant ubiquitous plastic debris. Microbial communities that settle on particles can potentially lead to the transport of pathogenic and harmful bloom-forming species, as well as have an impact on global biogeochemical cycles. However, little is known about the acclimation of microbes to different types of microplastic in the estuarine environment. In this study, 16S ribosomal RNA sequencing and analysis was performed on biofilm samples from three different types of microplastic beads placed in Baltimore’s Inner Harbor. Microbial communities associated with microplastic particles and glass bead control were monitored throughout the 28-day incubation time. A significant taxonomic composition dissimilarity was observed between particles-associated and free-living communities, suggesting a unique microbial adaptation to these biofilms. The polymer types, however, did not significantly influence the microbial community composition. Some families with interesting potential metabolism were identified in the plastisphere samples, including Cyanobacteria, Planctomycetes, Desulfobacteriota, and Firmicutes, leading into speculation of their ecological responses and metabolic roles in the estuarine environment. It is crucial to understand the microorganisms that inhabit plastic debris in estuarine systems and their potential metabolic capacity and how it may differ from its marine counterparts in order to assess their roles in global nutrient cycles and if they have ability to be utilized in bioremediation for plastic pollution.
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70
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Liu X, Inda ME, Lai Y, Lu TK, Zhao X. Engineered Living Hydrogels. ADVANCED MATERIALS (DEERFIELD BEACH, FLA.) 2022; 34:e2201326. [PMID: 35243704 PMCID: PMC9250645 DOI: 10.1002/adma.202201326] [Citation(s) in RCA: 70] [Impact Index Per Article: 23.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/09/2022] [Revised: 03/01/2022] [Indexed: 05/31/2023]
Abstract
Living biological systems, ranging from single cells to whole organisms, can sense, process information, and actuate in response to changing environmental conditions. Inspired by living biological systems, engineered living cells and nonliving matrices are brought together, which gives rise to the technology of engineered living materials. By designing the functionalities of living cells and the structures of nonliving matrices, engineered living materials can be created to detect variability in the surrounding environment and to adjust their functions accordingly, thereby enabling applications in health monitoring, disease treatment, and environmental remediation. Hydrogels, a class of soft, wet, and biocompatible materials, have been widely used as matrices for engineered living cells, leading to the nascent field of engineered living hydrogels. Here, the interactions between hydrogel matrices and engineered living cells are described, focusing on how hydrogels influence cell behaviors and how cells affect hydrogel properties. The interactions between engineered living hydrogels and their environments, and how these interactions enable versatile applications, are also discussed. Finally, current challenges facing the field of engineered living hydrogels for their applications in clinical and environmental settings are highlighted.
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Affiliation(s)
- Xinyue Liu
- Department of Mechanical Engineering, Massachusetts Institute of Technology, Cambridge, MA, 02139, USA
| | - Maria Eugenia Inda
- Synthetic Biology Group, Research Laboratory of Electronics, Massachusetts Institute of Technology, Cambridge, MA, 02139, USA
- Department of Biological Engineering, Massachusetts Institute of Technology, Cambridge, MA, 02139, USA
| | - Yong Lai
- Synthetic Biology Group, Research Laboratory of Electronics, Massachusetts Institute of Technology, Cambridge, MA, 02139, USA
- Department of Biological Engineering, Massachusetts Institute of Technology, Cambridge, MA, 02139, USA
| | - Timothy K Lu
- Synthetic Biology Group, Research Laboratory of Electronics, Massachusetts Institute of Technology, Cambridge, MA, 02139, USA
- Department of Biological Engineering, Massachusetts Institute of Technology, Cambridge, MA, 02139, USA
| | - Xuanhe Zhao
- Department of Mechanical Engineering, Massachusetts Institute of Technology, Cambridge, MA, 02139, USA
- Department of Civil and Environmental Engineering, Massachusetts Institute of Technology, Cambridge, MA, 02139, USA
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71
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Wang K, Lin H, Wang S, Dong X, Sun L, Zhou Q, Chen Y, Su B, Pan Z, Chen B, Gao Y. Species diversity and community structure of microalgae living on microplastics in Luoyuan Bay, China. MARINE POLLUTION BULLETIN 2022; 180:113809. [PMID: 35688065 DOI: 10.1016/j.marpolbul.2022.113809] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/02/2022] [Revised: 05/25/2022] [Accepted: 05/26/2022] [Indexed: 06/15/2023]
Abstract
This study was carried out in Luoyuan Bay in March 2021. The species composition of microalgae community colonizing on microplastics called epimicroplastic microalgae (EMP-MA) was analyzed and compared with planktonic microalgae (PM) community. The species number of EMP-MA community (73) was higher than that of PM community (56). However Simpson Index and Pielou Evenness Index of EMP-MA community were significantly lower than that of PM community (P < 0.05). Although diatom was the most diverse and abundant taxa in both EMP-MA and PM community, their species compositions were significantly different (P < 0.05). Dominant species were also different between the two communities. Moreover, 12 harmful algal species were found in EMP-MA community, which may drift with microplastics and increase the risks of harmful algal blooms (HABs). This study is helpful to reveal the dispersal mechanism of HABs and potential impacts of EMP-MA on marine ecosystem.
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Affiliation(s)
- Kang Wang
- Third Institute of Oceanography, Ministry of Natural Resources, Xiamen 361005, China; School of Life Sciences, Xiamen University, Xiamen 361102, China
| | - Hui Lin
- Third Institute of Oceanography, Ministry of Natural Resources, Xiamen 361005, China
| | - Sumin Wang
- Third Institute of Oceanography, Ministry of Natural Resources, Xiamen 361005, China
| | - Xu Dong
- Third Institute of Oceanography, Ministry of Natural Resources, Xiamen 361005, China
| | - Lin Sun
- School of Life Sciences, Xiamen University, Xiamen 361102, China
| | - Qianqian Zhou
- Third Institute of Oceanography, Ministry of Natural Resources, Xiamen 361005, China
| | - Yanghang Chen
- Third Institute of Oceanography, Ministry of Natural Resources, Xiamen 361005, China
| | - Baosi Su
- Third Institute of Oceanography, Ministry of Natural Resources, Xiamen 361005, China
| | - Zhong Pan
- Third Institute of Oceanography, Ministry of Natural Resources, Xiamen 361005, China
| | - Baohong Chen
- Third Institute of Oceanography, Ministry of Natural Resources, Xiamen 361005, China.
| | - Yahui Gao
- School of Life Sciences, Xiamen University, Xiamen 361102, China.
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72
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Dey S, Rout AK, Behera BK, Ghosh K. Plastisphere community assemblage of aquatic environment: plastic-microbe interaction, role in degradation and characterization technologies. ENVIRONMENTAL MICROBIOME 2022; 17:32. [PMID: 35739580 PMCID: PMC9230103 DOI: 10.1186/s40793-022-00430-4] [Citation(s) in RCA: 22] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/03/2022] [Accepted: 06/14/2022] [Indexed: 05/03/2023]
Abstract
It is undeniable that plastics are ubiquitous and a threat to global ecosystems. Plastic waste is transformed into microplastics (MPs) through physical and chemical disruption processes within the aquatic environment. MPs are detected in almost every environment due to their worldwide transportability through ocean currents or wind, which allows them to reach even the most remote regions of our planet. MPs colonized by biofilm-forming microbial communities are known as the ''plastisphere". The revelation that this unique substrate can aid microbial dispersal has piqued interest in the ground of microbial ecology. MPs have synergetic effects on the development, transportation, persistence, and ecology of microorganisms. This review summarizes the studies of plastisphere in recent years and the microbial community assemblage (viz. autotrophs, heterotrophs, predators, and pathogens). We also discussed plastic-microbe interactions and the potential sources of plastic degrading microorganisms. Finally, it also focuses on current technologies used to characterize those microbial inhabitants and recommendations for further research.
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Affiliation(s)
- Sujata Dey
- Aquatic Environmental Biotechnology and Nanotechnology Division, ICAR-Central Inland Fisheries Research Institute, Barrackpore, Kolkata, West Bengal, 700120, India
| | - Ajaya Kumar Rout
- Aquatic Environmental Biotechnology and Nanotechnology Division, ICAR-Central Inland Fisheries Research Institute, Barrackpore, Kolkata, West Bengal, 700120, India
| | - Bijay Kumar Behera
- Aquatic Environmental Biotechnology and Nanotechnology Division, ICAR-Central Inland Fisheries Research Institute, Barrackpore, Kolkata, West Bengal, 700120, India.
| | - Koushik Ghosh
- Aquaculture Laboratory, Department of Zoology, The University of Burdwan, Golapbag, Burdwan, West Bengal, 713104, India.
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73
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Schirmeister CG, Mülhaupt R. Closing the Carbon Loop in the Circular Plastics Economy. Macromol Rapid Commun 2022; 43:e2200247. [PMID: 35635841 DOI: 10.1002/marc.202200247] [Citation(s) in RCA: 15] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/15/2022] [Revised: 05/07/2022] [Indexed: 11/06/2022]
Abstract
Today, plastics are ubiquitous in everyday life, problem solvers of modern technologies, and crucial for sustainable development. Yet the surge in global demand for plastics of the growing world population has triggered a tidal wave of plastic debris in the environment. Moving from a linear to a zero-waste and carbon-neutral circular plastic economy is vital for the future of the planet. Taming the plastic waste flood requires closing the carbon loop through plastic reuse, mechanical and molecular recycling, carbon capture, and use of the greenhouse gas carbon dioxide. In the quest for eco-friendly products, plastics do not need to be reinvented but tuned for reuse and recycling. Their full potential must be exploited regarding energy, resource, and eco efficiency, waste prevention, circular economy, climate change mitigation, and lowering environmental pollution. Biodegradation holds promise for composting and bio-feedstock recovery, but it is neither the Holy Grail of circular plastics economy nor a panacea for plastic littering. As an alternative to mechanical downcycling, molecular recycling enables both closed-loop recovery of virgin plastics and open-loop valorization, producing hydrogen, fuels, refinery feeds, lubricants, chemicals, and carbonaceous materials. Closing the carbon loop does not create a Perpetuum Mobile and requires renewable energy to achieve sustainability. This article is protected by copyright. All rights reserved.
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Affiliation(s)
- Carl G Schirmeister
- Freiburg Materials Research Center and Institute for Macromolecular Chemistry, University of Freiburg, Stefan-Meier-Str. 31, D-79104, Freiburg, Germany
| | - Rolf Mülhaupt
- Sustainability Center, University of Freiburg, Ecker-Str. 4, D-79104, Freiburg, Germany
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74
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Wang C, Wang L, Ok YS, Tsang DCW, Hou D. Soil plastisphere: Exploration methods, influencing factors, and ecological insights. JOURNAL OF HAZARDOUS MATERIALS 2022; 430:128503. [PMID: 35739682 DOI: 10.1016/j.jhazmat.2022.128503] [Citation(s) in RCA: 49] [Impact Index Per Article: 16.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/15/2022] [Revised: 02/10/2022] [Accepted: 02/13/2022] [Indexed: 06/15/2023]
Abstract
Microplastic (MP), an emerging contaminant, is globally prevalent and poses potential environmental threats and ecological risks to both aquatic and terrestrial ecosystems. When MPs enter into natural environments, they may serve as artificial substrates for microbial colonization and plastisphere formation, providing new ecological niches for microorganisms. Recent studies of the plastisphere have focused on aquatic ecosystems. However, our understanding of the soil plastisphere e.g. its formation process, microbial ecology, co-transport of organic pollutants and heavy metals, and effects on biogeochemical processes is still very limited. This review summarizes latest methods used to explore the soil plastisphere, assesses the factors influencing the microbial ecology of the soil plastisphere, and sheds light on potential ecological risks caused by the soil plastisphere. The formation and succession of soil plastisphere communities can be driven by MP characteristics and soil environmental factors. The soil plastisphere may affect a series of ecological processes, especially the co-transport of environmental contaminants, biodegradation of MPs, and soil carbon cycling. We aim to narrow the knowledge gap between the soil and aquatic plastisphere, and provide valuable guidance for future research on the soil plastisphere in MP-contaminated soils.
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Affiliation(s)
- Chengqian Wang
- School of Environment, Tsinghua University, Beijing 100084, China
| | - Liuwei Wang
- School of Environment, Tsinghua University, Beijing 100084, China
| | - Yong Sik Ok
- Korea Biochar Research Center, APRU Sustainable Waste Management Program & Division of Environmental Science and Ecological Engineering, Korea University, Seoul 02841, Republic of Korea
| | - Daniel C W Tsang
- Department of Civil and Environmental Engineering, The Hong Kong Polytechnic University, Hung Hom, Kowloon, Hong Kong, China
| | - Deyi Hou
- School of Environment, Tsinghua University, Beijing 100084, China.
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75
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Peng C, Wang J, Liu X, Wang L. Differences in the Plastispheres of Biodegradable and Non-biodegradable Plastics: A Mini Review. Front Microbiol 2022; 13:849147. [PMID: 35547108 PMCID: PMC9082994 DOI: 10.3389/fmicb.2022.849147] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/05/2022] [Accepted: 04/07/2022] [Indexed: 12/03/2022] Open
Abstract
There has been a steady rise in the production and disposal of biodegradable plastics. Unlike the microorganisms present in the biofilms on non-biodegradable plastic surfaces (the “plastisphere”), the plastisphere of biodegradable plastic has not been well-characterized. As the polymer structure of biodegradable plastic has a higher microbial affinity than that of non-biodegradable plastic, their plastispheres are assumed to be different. This review summarizes the reported differences in microbial communities on the surface of biodegradable and non-biodegradable plastics, discusses the driving forces behind these differences, and discusses the potential environmental risks. Overall, the plastisphere biomass on the surface of non-biodegradable plastic was observed to be lower than that of biodegradable plastic. The community structure of microbes in both plastispheres was diverse, mainly due to the properties of the plastic surface, such as surface charge, hydrophilicity/hydrophobicity, roughness, and bioavailability of polymer components for microbes. Further research should focus on developing biodegradable plastic that degrade faster in the environment, revealing the mechanism of enrichment of ARGs and potential pathogens on plastics, and understanding the potential influence of plastispheres on the evolution and selection of plastic-degrading microbial potential.
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Affiliation(s)
- Chu Peng
- MOE Key Laboratory of Pollution Processes and Environmental Criteria, College of Environmental Science and Engineering, Nankai University, Tianjin, China
| | - Jiao Wang
- College of Environmental Science and Engineering, Tianjin University, Tianjin, China
| | - Xianhua Liu
- College of Environmental Science and Engineering, Tianjin University, Tianjin, China
| | - Lei Wang
- MOE Key Laboratory of Pollution Processes and Environmental Criteria, College of Environmental Science and Engineering, Nankai University, Tianjin, China
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76
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Pinto M, Zhao Z, Klun K, Libowitzky E, Herndl GJ. Microbial Consortiums of Putative Degraders of Low-Density Polyethylene-Associated Compounds in the Ocean. mSystems 2022; 7:e0141521. [PMID: 35229650 PMCID: PMC8941889 DOI: 10.1128/msystems.01415-21] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/23/2021] [Accepted: 01/28/2022] [Indexed: 11/20/2022] Open
Abstract
Polyethylene (PE) is one of the most abundant plastics in the ocean. The development of a biofilm on PE in the ocean has been reported, yet whether some of the biofilm-forming organisms can biodegrade this plastic in the environment remains unknown. Via metagenomics analysis, we taxonomically and functionally analyzed three biofilm communities using low-density polyethylene (LDPE) as their sole carbon source for 2 years. Several of the taxa that increased in relative abundance over time were closely related to known degraders of alkane and other hydrocarbons. Alkane degradation has been proposed to be involved in PE degradation, and most of the organisms increasing in relative abundance over time harbored genes encoding proteins essential in alkane degradation, such as the genes alkB and CYP153, encoding an alkane monooxygenase and a cytochrome P450 alkane hydroxylase, respectively. Weight loss of PE sheets when incubated with these communities and chemical and electron microscopic analyses provided evidence for alteration of the PE surface over time. Taken together, these results provide evidence for the utilization of LDPE-associated compounds by the prokaryotic communities. This report identifies a group of genes potentially involved in the degradation of the LDPE polymeric structure and/or associated plastic additives in the ocean and describes a phylogenetically diverse community of plastic biofilm-dwelling microbes with the potential for utilizing LDPE-associated compounds as carbon and energy source. IMPORTANCE Low-density polyethylene (LDPE) is one of the most used plastics worldwide, and a large portion of it ends up in the ocean. Very little is known about its fate in the ocean and whether it can be biodegraded by microorganisms. By combining 2-year incubations with metagenomics, respiration measurements, and LDPE surface analysis, we identified bacteria and associated genes and metabolic pathways potentially involved in LDPE biodegradation. After 2 years of incubation, two of the microbial communities exhibited very similar taxonomic compositions mediating changes to the LDPE pieces they were incubated with. We provide evidence that there are plastic-biofilm dwelling bacteria in the ocean that might have the potential to degrade LDPE-associated compounds and that alkane degradation pathways might be involved.
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Affiliation(s)
- Maria Pinto
- Department of Functional and Evolutionary Ecology, University of Vienna, Vienna, Austria
- Research Platform ‘Plastics in the Environment and Society,’ University of Vienna, Vienna, Austria
| | - Zihao Zhao
- Department of Functional and Evolutionary Ecology, University of Vienna, Vienna, Austria
| | - Katja Klun
- Marine Biology Station, National Institute of Biology, Piran, Slovenia
| | - Eugen Libowitzky
- Department of Mineralogy and Crystallography, University of Vienna, Vienna, Austria
| | - Gerhard J. Herndl
- Department of Functional and Evolutionary Ecology, University of Vienna, Vienna, Austria
- Research Platform ‘Plastics in the Environment and Society,’ University of Vienna, Vienna, Austria
- NIOZ, Department of Marine Microbiology and Biogeochemistry, Royal Netherlands Institute for Sea Research, Utrecht University, Den Burg, The Netherlands
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77
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Song J, Beule L, Jongmans-Hochschulz E, Wichels A, Gerdts G. The travelling particles: community dynamics of biofilms on microplastics transferred along a salinity gradient. ISME COMMUNICATIONS 2022; 2:35. [PMID: 37938248 PMCID: PMC9723596 DOI: 10.1038/s43705-022-00117-4] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/01/2021] [Revised: 03/15/2022] [Accepted: 03/17/2022] [Indexed: 05/28/2023]
Abstract
Microplastics (MP), as novel substrata for microbial colonization within aquatic ecosystems, are a matter of growing concern due to their potential to propagate foreign or invasive species across different environments. MP are known to harbour a diversity of microorganisms, yet little is understood of the dynamics of their biofilms and their capacity to successfully displace these microorganisms across different aquatic ecosystems typically marked by steep salinity gradients. To address this, we performed an in situ sequential incubation experiment to simulate MP transport from riverine to coastal seawaters using synthetic (high-density polyethylene, HDPE and tyre wear, TW) and natural (Wood) substrata. Bacterial communities on incubated particles were compared to each other as well as to those in surrounding waters, and their dynamics along the gradient investigated. All communities differed significantly from each other in their overall structure along the salinity gradient and were shaped by different ecological processes. While HDPE communities were governed by environmental selection, those on TW and Wood were dominated by stochastic events of dispersal and drift. Upon transfer into coastal seawaters, an almost complete turnover was observed among HDPE and TW communities. While synthetic particles displaced a minor proportion of communities across the salinity gradient, some of these comprised putatively pathogenic and resistant taxa. Our findings present an extensive assessment of MP biofilms and their dynamics upon displacement across different aquatic systems, presenting new insights into the role of MP as transport vectors.
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Affiliation(s)
- Jessica Song
- Department of Microbial Ecology, Biologische Anstalt Helgoland, Alfred Wegener Institute Helmholtz Centre for Polar and Marine Research, 27498, Helgoland, Germany.
| | - Lukas Beule
- Julius Kühn Institute-Federal Research Centre for Cultivated Plants, Institute for Ecological Chemistry, Plant Analysis and Stored Product Protection, Königin-Luise-Strasse 19, 14195, Berlin, Germany
| | - Elanor Jongmans-Hochschulz
- Department of Microbial Ecology, Biologische Anstalt Helgoland, Alfred Wegener Institute Helmholtz Centre for Polar and Marine Research, 27498, Helgoland, Germany
| | - Antje Wichels
- Department of Microbial Ecology, Biologische Anstalt Helgoland, Alfred Wegener Institute Helmholtz Centre for Polar and Marine Research, 27498, Helgoland, Germany
| | - Gunnar Gerdts
- Department of Microbial Ecology, Biologische Anstalt Helgoland, Alfred Wegener Institute Helmholtz Centre for Polar and Marine Research, 27498, Helgoland, Germany
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78
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Zhou XL, He PJ, Peng W, Yi SX, Lü F, Shao LM, Zhang H. Upcycling waste polyvinyl chloride: One-pot synthesis of valuable carbon materials and pipeline-quality syngas via pyrolysis in a closed reactor. JOURNAL OF HAZARDOUS MATERIALS 2022; 427:128210. [PMID: 34999401 DOI: 10.1016/j.jhazmat.2021.128210] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/08/2021] [Revised: 12/22/2021] [Accepted: 12/31/2021] [Indexed: 06/14/2023]
Abstract
Polyvinyl chloride (PVC) is one of the most commonly used plastics. The treatment and recycling of PVC waste is still challenging, due to its non-biodegradability, low thermal stability, high Cl content and low product value. In this study, a one-pot method was developed to upcycle PVC into valuable carbon materials, pipeline-quality pyrolysis gas and chlorides. The well-designed process included dechlorination by Cl-fixative (ZnO or KOH), carbonization of dechlorinated polyenes, and modification of carbon materials in sequence. ZnO and KOH converted 84.48% and 94.15% of total Cl into corresponding chlorides, respectively. CH4 and H2 accounted for 81.87-99.34 vol% of pyrolysis gas with higher heat values of 30.11-32.84 MJ m-3, which can be used as substitute natural gas. As high as 83.13% of the C element was converted into carbon materials. The morphology, structure and property of carbon materials can be modified by different Cl-fixatives. Millimeter-scale carbon spheres with mono-dispersity and porous carbon with a high specific surface area of 1922 m2 g-1 were obtained when ZnO and KOH were added, respectively. Moreover, the reaction mechanisms of PVC with Cl-fixatives were also deciphered through thermogravimetric analysis and thermodynamic simulation.
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Affiliation(s)
- Xiao-Li Zhou
- Institute of Waste Treatment & Reclamation, College of Environmental Science and Engineering, Tongji University, 1239 Siping Road, Shanghai 200092, PR China; State Key Laboratory of Materials-Oriented Chemical Engineering, College of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University, 30 Puzhu South Road, Nanjing 211800, PR China
| | - Pin-Jing He
- Institute of Waste Treatment & Reclamation, College of Environmental Science and Engineering, Tongji University, 1239 Siping Road, Shanghai 200092, PR China; Shanghai Engineering Research Center of Multi-source Solid Wastes Co-processing and Energy Utilization, Shanghai 200092, PR China
| | - Wei Peng
- Institute of Waste Treatment & Reclamation, College of Environmental Science and Engineering, Tongji University, 1239 Siping Road, Shanghai 200092, PR China; Shanghai Engineering Research Center of Multi-source Solid Wastes Co-processing and Energy Utilization, Shanghai 200092, PR China
| | - Shou-Xin Yi
- Institute of Waste Treatment & Reclamation, College of Environmental Science and Engineering, Tongji University, 1239 Siping Road, Shanghai 200092, PR China; Shanghai Engineering Research Center of Multi-source Solid Wastes Co-processing and Energy Utilization, Shanghai 200092, PR China
| | - Fan Lü
- Institute of Waste Treatment & Reclamation, College of Environmental Science and Engineering, Tongji University, 1239 Siping Road, Shanghai 200092, PR China; Shanghai Engineering Research Center of Multi-source Solid Wastes Co-processing and Energy Utilization, Shanghai 200092, PR China
| | - Li-Ming Shao
- Institute of Waste Treatment & Reclamation, College of Environmental Science and Engineering, Tongji University, 1239 Siping Road, Shanghai 200092, PR China; Shanghai Engineering Research Center of Multi-source Solid Wastes Co-processing and Energy Utilization, Shanghai 200092, PR China
| | - Hua Zhang
- Institute of Waste Treatment & Reclamation, College of Environmental Science and Engineering, Tongji University, 1239 Siping Road, Shanghai 200092, PR China; Shanghai Engineering Research Center of Multi-source Solid Wastes Co-processing and Energy Utilization, Shanghai 200092, PR China.
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79
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Skariyachan S, Taskeen N, Kishore AP, Krishna BV. Recent advances in plastic degradation - From microbial consortia-based methods to data sciences and computational biology driven approaches. JOURNAL OF HAZARDOUS MATERIALS 2022; 426:128086. [PMID: 34933258 DOI: 10.1016/j.jhazmat.2021.128086] [Citation(s) in RCA: 30] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/26/2021] [Revised: 12/11/2021] [Accepted: 12/13/2021] [Indexed: 06/14/2023]
Abstract
The conventional methods of plastic waste management such as mechanical and chemical recycling, landfill complemented by incineration and pyrosis have limited scope. Thus, microbiological-based approaches by the application of microbial consortia or cocultures are appropriate, cost-effective, and eco-friendly to manage plastic wastes. Screening of novel plastic degrading microorganisms, the formulation of microbial consortia, and utilisation of their enzymes probably play a role in plastic waste management. The by-products of microbial degradation of plastic waste can be used as bio-energy sources, that aids in the development of cost-effective bio-digesters. The recent advancements in computational biology and bioinformatics play a vital role in understanding the molecular basis of enzymatic degradation of plastic polymers by microorganisms. Understanding the three-dimensional structures of plastic degrading enzymes and their metabolic pathways play a vital role in studying the microbial degradation of plastics. The present review highlights the scope of various microorganisms and their enzymes in plastic degradation. The review emphasizes the applications of co-cultures or microbial consortia-based approaches for the enhanced degradation of plastic polymers and the production of value-added end products that can be used as the prototypes of bioenergy sources. The review also provides a comprehensive outlook on the applications of data sciences, computational biology, and bioinformatics resources, and web-based tools towards the study of microbial degradation of plastic polymers.
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Affiliation(s)
| | - Neha Taskeen
- Department of Biotechnology, Dayananda Sagar College of Engineering, Bangalore, Karnataka, Pin 560078, India
| | - Alice Preethi Kishore
- Department of Biotechnology, Dayananda Sagar College of Engineering, Bangalore, Karnataka, Pin 560078, India
| | - Bhavya Venkata Krishna
- Department of Biotechnology, Dayananda Sagar College of Engineering, Bangalore, Karnataka, Pin 560078, India
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80
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Martínez-Campos S, Pissaridou P, Drakou K, Shammas C, Andreou K, González-Pleiter M, Fernández-Piñas F, Leganes F, Rosal R, Koutinas M, Kapnisis K, Vasquez MI. Evolution of prokaryotic colonisation of greenhouse plastics discarded into the environment. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2022; 232:113213. [PMID: 35085885 DOI: 10.1016/j.ecoenv.2022.113213] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/23/2021] [Revised: 01/12/2022] [Accepted: 01/14/2022] [Indexed: 06/14/2023]
Abstract
Current knowledge on the capacity of plastics as vectors of microorganisms and their ability to transfer microorganisms between different habitats (i.e. air, soil and river) is limited. The objective of this study was to characterise the evolution of the bacterial community adhered to environmental plastics [low-density polyethylene (LDPE)] across different environments from their point of use to their receiving environment destination in the sea. The study took place in a typical Mediterranean intermittent river basin in Larnaka, Cyprus, characterised by a large greenhouse area whose plastic debris may end up in the sea due to mismanagement. Five locations were selected to represent the environmental fate of greenhouse plastics from their use, through their abandonment in soil and subsequent transport to the river and the sea, taking samples of plastics and the surrounding environments (soil and water). The bacterial community associated with each sample was studied by 16S rRNA metabarcoding; also, the main physicochemical parameters in each environmental compartment were analysed to understand these changes. The identification and chemical changes in greenhouse plastics were tracked using Attenuated Total Reflection Fourier Transform Infra-red spectroscopy (ATR-FTIR). Scanning Electron Microscope (SEM) analysis demonstrated an evolution of the biofilm at each sampling location. β-diversity studies showed that the bacterial community adhered to plastics was significantly different from that of the surrounding environment only in samples taken from aqueous environments (freshwater and sea) (p-value p-value > 0.05). The environmental parameters (pH, salinity, total nitrogen and total phosphorus) explained the differences observed at each location to a limited extent. Furthermore, bacterial community differences among samples were lower in plastics collected from the soil than in plastics taken from rivers and seawater. Six genera (Flavobacterium, Altererythrobacter, Acinetobacter, Pleurocapsa, Georgfuchsia and Rhodococcus) were detected in the plastic, irrespective of the sampling location, confirming that greenhouse plastics can act as possible vectors of microorganisms between different environments: from their point of use, through a river system to the final coastal receiving environment. In conclusion, this study confirms the ability of greenhouse plastics to transport bacteria, including pathogens, between different environments. Future studies should evaluate these risks by performing complete sequencing metagenomics to decipher the functions of the plastisphere.
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Affiliation(s)
- Sergio Martínez-Campos
- Department of Analytical Chemistry, Physical Chemistry and Chemical Engineering, University of Alcalá, Alcalá de Henares, E-28871 Madrid, Spain
| | - Panayiota Pissaridou
- Department of Chemical Engineering, Cyprus University of Technology, 30 Archbishop Kyprianos str., 3036 Limassol, Cyprus
| | - Katerina Drakou
- Department of Chemical Engineering, Cyprus University of Technology, 30 Archbishop Kyprianos str., 3036 Limassol, Cyprus
| | - Christos Shammas
- Avva Pharmaceuticals Ltd, Spyrou Kyprianou Ave 23, 4001 Limassol, Cyprus
| | - Kostas Andreou
- Department of Chemical Engineering, Cyprus University of Technology, 30 Archbishop Kyprianos str., 3036 Limassol, Cyprus
| | - Miguel González-Pleiter
- Department of Biology, Faculty of Sciences, Universidad Autónoma de Madrid, Cantoblanco, E-28049 Madrid, Spain
| | - Francisca Fernández-Piñas
- Department of Biology, Faculty of Sciences, Universidad Autónoma de Madrid, Cantoblanco, E-28049 Madrid, Spain
| | - Francisco Leganes
- Department of Biology, Faculty of Sciences, Universidad Autónoma de Madrid, Cantoblanco, E-28049 Madrid, Spain
| | - Roberto Rosal
- Department of Analytical Chemistry, Physical Chemistry and Chemical Engineering, University of Alcalá, Alcalá de Henares, E-28871 Madrid, Spain
| | - Michalis Koutinas
- Department of Chemical Engineering, Cyprus University of Technology, 30 Archbishop Kyprianos str., 3036 Limassol, Cyprus
| | - Konstantinos Kapnisis
- Department of Mechanical Engineering and Materials Science and Engineering, Cyprus University of Technology, 30 Archbishop Kyprianos str., 3036 Limassol, Cyprus
| | - Marlen I Vasquez
- Department of Chemical Engineering, Cyprus University of Technology, 30 Archbishop Kyprianos str., 3036 Limassol, Cyprus.
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81
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Zhang Y, Ma J, O'Connor P, Zhu YG. Microbial communities on biodegradable plastics under different fertilization practices in farmland soil microcosms. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 809:152184. [PMID: 34890659 DOI: 10.1016/j.scitotenv.2021.152184] [Citation(s) in RCA: 24] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/07/2021] [Revised: 11/28/2021] [Accepted: 11/30/2021] [Indexed: 06/13/2023]
Abstract
Plastic mulching is a common practice in agricultural systems and is often combined with fertilization. Biodegradable plastics (BPs) are becoming an alternative to non-biodegradable plastics (non-BPs) for soil mulching. However, the effects of fertilization on the microbial communities on BPs remain unclear. Here, we explored the responses of the plastisphere to different fertilization practices in soil-based microcosms containing three BPs: polylactic acid (PLA), poly (butylene succinate) (PBS), and poly (butylene-adipate-co-terephthalate) (PBAT), and one non-BP (low-density polyethylene, LDPE). The 16S and ITS rRNA gene-based Illumina sequencing method were used to identify the bacterial and fungal communities on the plastics and in the soils. Microbial community structure on BPs was significantly different from that in soils and on LDPE. The predicted functional profiles of bacteria on BPs, especially PBAT, were distinct from those in soils. The plastisphere communities on BPs were dominated by microbes adapted to access and utilize carbon sources compared with of the communities on LDPE. Application of manure increased the alpha diversity of bacterial communities on BPs but decreased it on LDPE. The structure of bacterial communities on BPs changed with the application of manure. Our research establishes the baseline dynamics of plastisphere communities on BPs in soils.
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Affiliation(s)
- Yu Zhang
- State Key Laboratory of Urban and Regional Ecology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Jun Ma
- Key Laboratory of Urban Environment and Health, Institute of Urban Environment, Chinese Academy of Sciences, 1799 Jimei Road, Xiamen 361021, China; Zhejiang Key Laboratory of Urban Environmental Processes and Pollution Control, Ningbo Urban Environment Observation and Research Station-NUEORS, Institute of Urban Environment, Chinese Academy of Sciences, Ningbo 315800, China.
| | - Patrick O'Connor
- Centre for Global Food and Resources, University of Adelaide, Adelaide 5005, Australia
| | - Yong-Guan Zhu
- State Key Laboratory of Urban and Regional Ecology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China; University of Chinese Academy of Sciences, Beijing 100049, China; Key Laboratory of Urban Environment and Health, Institute of Urban Environment, Chinese Academy of Sciences, 1799 Jimei Road, Xiamen 361021, China
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82
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Nava V, Matias MG, Castillo‐Escrivà A, Messyasz B, Leoni B. Microalgae colonization of different microplastic polymers in experimental mesocosms across an environmental gradient. GLOBAL CHANGE BIOLOGY 2022; 28:1402-1413. [PMID: 34773676 PMCID: PMC9299714 DOI: 10.1111/gcb.15989] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/30/2021] [Revised: 10/11/2021] [Accepted: 10/22/2021] [Indexed: 05/21/2023]
Abstract
A variety of organisms can colonize microplastic surfaces through biofouling processes. Heterotrophic bacteria tend to be the focus of plastisphere research; however, the presence of epiplastic microalgae within the biofilm has been repeatedly documented. Despite the relevance of biofouling in determining the fate and effects of microplastics in aquatic systems, data about this process are still scarce, especially for freshwater ecosystems. Here, our goal was to evaluate the biomass development and species composition of biofilms on different plastic polymers and to investigate whether plastic substrates exert a strong enough selection to drive species sorting, overcoming other niche-defining factors. We added microplastic pellets of high-density polyethylene (HDPE), polyethylene terephthalate (PET), and a mix of the two polymers in 15 lentic mesocosms in five different locations of the Iberian Peninsula, and after one month, we evaluated species composition and biomass of microalgae developed on plastic surfaces. Our results, based on 45 samples, showed that colonization of plastic surfaces occurred in a range of lentic ecosystems covering a wide geographical gradient and different environmental conditions (e.g., nutrient concentration, conductivity, macrophyte coverage). We highlighted that total biomass differed based on the polymer considered, with higher biomass developed on PET substrate compared to HDPE. Microplastics supported the growth of a rich and diversified community of microalgae (242 species), with some cosmopolite species. However, we did not observe species-specificity in the colonization of the different plastic polymers. Local species pool and nutrient concentration rather than polymeric composition seemed to be the determinant factor defying the community diversity. Regardless of specific environmental conditions, we showed that many species could coexist on the surface of relatively small plastic items, highlighting how microplastics may have considerable carrying capacity, with possible consequences on the wider ecological context.
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Affiliation(s)
- Veronica Nava
- Department of Earth and Environmental SciencesUniversity of Milano‐BicoccaMilanoItaly
| | - Miguel G. Matias
- Department of Biogeografía y Cambio GlobalMuseo Nacional de Ciencias NaturalesCSICMadridSpain
- MED—Mediterranean Institute for Agriculture, Environment and DevelopmentRui Nabeiro Biodiversity ChairUniversidade de ÉvoraÉvoraPortugal
| | - Andreu Castillo‐Escrivà
- MED—Mediterranean Institute for Agriculture, Environment and DevelopmentRui Nabeiro Biodiversity ChairUniversidade de ÉvoraÉvoraPortugal
| | - Beata Messyasz
- Department of HydrobiologyInstitute of Environmental BiologyAdam Mickiewicz University in PoznanPoznańPoland
| | - Barbara Leoni
- Department of Earth and Environmental SciencesUniversity of Milano‐BicoccaMilanoItaly
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83
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Syranidou E, Kalogerakis N. Interactions of microplastics, antibiotics and antibiotic resistant genes within WWTPs. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 804:150141. [PMID: 34509832 DOI: 10.1016/j.scitotenv.2021.150141] [Citation(s) in RCA: 58] [Impact Index Per Article: 19.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/03/2021] [Revised: 08/21/2021] [Accepted: 08/31/2021] [Indexed: 06/13/2023]
Abstract
Microplastics (MPs) have been detected in atmosphere, soil, and water and have been characterized as contaminants of emerging concern. When exposed to these environments, MPs interact with the chemical compounds as well as the (micro)organisms inhabiting these ecosystems. This paper overviews the interactions and significant factors influencing the sorption process of antibiotics on MPs since distinct interactions are developed between MPs and antibiotics. The interplay between the MPs and the antibiotic resistant genes (ARGs) microbial hosts is presented and the important factors that may shape the plastisphere resistome are discussed. The interactions of MPs, antibiotics and antibiotic resistant bacteria (ARB) and ARGs in wastewater treatment plants (WWTPs) were discussed with the aim to provide a perspective for better understanding of the role of WWTPs in bringing together MPs, antibiotics and ARB/ARGs and further as release points of MPs carrying antibiotics, and ARB/ARGs.
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Affiliation(s)
- Evdokia Syranidou
- School of Chemical and Environmental Engineering, Technical University of Crete, Chania, Greece.
| | - Nicolas Kalogerakis
- School of Chemical and Environmental Engineering, Technical University of Crete, Chania, Greece
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84
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Miri S, Saini R, Davoodi SM, Pulicharla R, Brar SK, Magdouli S. Biodegradation of microplastics: Better late than never. CHEMOSPHERE 2022; 286:131670. [PMID: 34351281 DOI: 10.1016/j.chemosphere.2021.131670] [Citation(s) in RCA: 91] [Impact Index Per Article: 30.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/11/2021] [Revised: 07/13/2021] [Accepted: 07/23/2021] [Indexed: 06/13/2023]
Abstract
Plastics use is growing due to its applications in the economy, human health and aesthetics. The major plastic particles in the form of microplastics (MPs) released into the environment are made up of polyethylene (PE), polypropylene (PP), polyvinylchloride (PVC), and polyethylene terephthalate (PET). Tremendous usage and continuous accumulation of MPs in the environment pose a global threat to ecosystems and human health. The current knowledge of biotechnological, aerobic and aerobic biodegradation approaches emphasizes the microbial culture's potential towards MPs removal. This review selectively provides recent biotechnological advances such as biostimulation, bioaugmentation and enzymatic biodegradation that can be applied for MPs removal by biodegradation and bioaccumulation. This review summarizes the knowledge and the research exploration on the biodegradation of synthetic organic MPs with different biodegradability. However, further research is still needed to understand the underlying mechanism of MPs biodegradation in soil and water systems, leading to the development of an effective method for MPs removal.
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Affiliation(s)
- Saba Miri
- Department of Civil Engineering, Lassonde School of Engineering, York University, North York, Toronto, Ontario, M3J 1P3, Canada; Institut National de La Recherche Scientifique, Centre-Eau, Terre et Environnement, 490, Rue de La Couronne, Québec, G1K 9A9, Canada
| | - Rahul Saini
- Department of Civil Engineering, Lassonde School of Engineering, York University, North York, Toronto, Ontario, M3J 1P3, Canada
| | - Seyyed Mohammadreza Davoodi
- Department of Civil Engineering, Lassonde School of Engineering, York University, North York, Toronto, Ontario, M3J 1P3, Canada; Institut National de La Recherche Scientifique, Centre-Eau, Terre et Environnement, 490, Rue de La Couronne, Québec, G1K 9A9, Canada
| | - Rama Pulicharla
- Department of Civil Engineering, Lassonde School of Engineering, York University, North York, Toronto, Ontario, M3J 1P3, Canada
| | - Satinder Kaur Brar
- Department of Civil Engineering, Lassonde School of Engineering, York University, North York, Toronto, Ontario, M3J 1P3, Canada; Institut National de La Recherche Scientifique, Centre-Eau, Terre et Environnement, 490, Rue de La Couronne, Québec, G1K 9A9, Canada.
| | - Sara Magdouli
- Department of Civil Engineering, Lassonde School of Engineering, York University, North York, Toronto, Ontario, M3J 1P3, Canada
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85
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Du Y, Liu X, Dong X, Yin Z. A review on marine plastisphere: biodiversity, formation, and role in degradation. Comput Struct Biotechnol J 2022; 20:975-988. [PMID: 35242288 PMCID: PMC8861569 DOI: 10.1016/j.csbj.2022.02.008] [Citation(s) in RCA: 63] [Impact Index Per Article: 21.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/25/2021] [Revised: 02/11/2022] [Accepted: 02/11/2022] [Indexed: 12/20/2022] Open
Abstract
The pollution of plastic waste has become an increasingly serious environmental crisis. Recently, plastic has been detected in various kinds of environments, even in human tissues, which is an increasing threat to the ecosystems and humans. In the ocean, the plastic waste is eventually fragmentized into microplastics (MPs) under the disruption of physical and chemical processes. MPs are colonized by microbial communities such as fungi, diatoms, and bacteria, which form biofilms on the surface of the plastic called “plastisphere”. In this review, we summarize the studies related to microorganisms in the plastisphere in recent years and describe the microbial species in the plastisphere, mainly including bacteria, fungi, and autotrophs. Secondly, we explore the interactions between MPs and the plastisphere. The depth of MPs in the ocean and the nutrients in the surrounding seawater can have a great impact on the community structure of microorganisms in the plastisphere. Finally, we discuss the types of MP-degrading bacteria in the ocean, and use the “seed bank” theory to speculate on the potential sources of MP-degrading microorganisms. Challenges and future research prospects are also discussed.
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Affiliation(s)
- Yuhui Du
- MOE International Joint Research Laboratory on Synthetic Biology and Medicines, School of Biology and Biological Engineering, South China University of Technology, Guangzhou, PR China
- Key Laboratory of Molecular Medicine and Biotherapy, School of Life Science, Beijing Institute of Technology, Beijing, PR China
| | - Xinbei Liu
- National Engineering Research Center for Efficient Utilization of Soil and Fertilizer Resources, College of Resources and Environment, Shandong Agricultural University, Tai’an, PR China
| | - Xusheng Dong
- Ruminant Nutrition and Physiology Laboratory, College of Animal Science and Technology, Shandong Agricultural University, Tai’an, PR China
| | - Zhiqiu Yin
- National Engineering Research Center for Efficient Utilization of Soil and Fertilizer Resources, College of Resources and Environment, Shandong Agricultural University, Tai’an, PR China
- Corresponding author.
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86
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Chattopadhyay I. Role of microbiome and biofilm in environmental plastic degradation. BIOCATALYSIS AND AGRICULTURAL BIOTECHNOLOGY 2022. [DOI: 10.1016/j.bcab.2021.102263] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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87
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Odobel C, Dussud C, Philip L, Derippe G, Lauters M, Eyheraguibel B, Burgaud G, Ter Halle A, Meistertzheim AL, Bruzaud S, Barbe V, Ghiglione JF. Bacterial Abundance, Diversity and Activity During Long-Term Colonization of Non-biodegradable and Biodegradable Plastics in Seawater. Front Microbiol 2021; 12:734782. [PMID: 34867851 PMCID: PMC8637277 DOI: 10.3389/fmicb.2021.734782] [Citation(s) in RCA: 26] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/01/2021] [Accepted: 09/17/2021] [Indexed: 11/13/2022] Open
Abstract
The microorganisms living on plastics called "plastisphere" have been classically described as very abundant, highly diverse, and very specific when compared to the surrounding environments, but their potential ability to biodegrade various plastic types in natural conditions have been poorly investigated. Here, we follow the successive phases of biofilm development and maturation after long-term immersion in seawater (7 months) on conventional [fossil-based polyethylene (PE) and polystyrene (PS)] and biodegradable plastics [biobased polylactic acid (PLA) and polyhydroxybutyrate-co-hydroxyvalerate (PHBV), or fossil-based polycaprolactone (PCL)], as well as on artificially aged or non-aged PE without or with prooxidant additives [oxobiodegradable (OXO)]. First, we confirmed that the classical primo-colonization and growth phases of the biofilms that occurred during the first 10 days of immersion in seawater were more or less independent of the plastic type. After only 1 month, we found congruent signs of biodegradation for some bio-based and also fossil-based materials. A continuous growth of the biofilm during the 7 months of observation (measured by epifluorescence microscopy and flow cytometry) was found on PHBV, PCL, and artificially aged OXO, together with a continuous increase in intracellular (3H-leucine incorporation) and extracellular activities (lipase, aminopeptidase, and β-glucosidase) as well as subsequent changes in biofilm diversity that became specific to each polymer type (16S rRNA metabarcoding). No sign of biodegradation was visible for PE, PS, and PLA under our experimental conditions. We also provide a list of operational taxonomic units (OTUs) potentially involved in the biodegradation of these polymers under natural seawater conditions, such as Pseudohongiella sp. and Marinobacter sp. on PCL, Marinicella litoralis and Celeribacter sp. on PHBV, or Myxococcales on artificially aged OXO. This study opens new routes for a deeper understanding of the polymers' biodegradability in seawaters, especially when considering an alternative to conventional fossil-based plastics.
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Affiliation(s)
- Charlene Odobel
- CNRS, UMR 7621, Laboratoire d'Océanographie Microbienne (LOMIC), Sorbonne Université, Observatoire Océanologique de Banyuls, Banyuls-sur-Mer, France
| | - Claire Dussud
- CNRS, UMR 7621, Laboratoire d'Océanographie Microbienne (LOMIC), Sorbonne Université, Observatoire Océanologique de Banyuls, Banyuls-sur-Mer, France
| | - Lena Philip
- CNRS, UMR 7621, Laboratoire d'Océanographie Microbienne (LOMIC), Sorbonne Université, Observatoire Océanologique de Banyuls, Banyuls-sur-Mer, France.,SAS Plastic@Sea, Observatoire Océanologique de Banyuls, Banyuls-sur-Mer, France
| | - Gabrielle Derippe
- CNRS, UMR 6027, Institut de Recherche Dupuy de Lôme (IRDL), Université de Bretagne-Sud, Lorient, France
| | - Marion Lauters
- CNRS, UMR 7621, Laboratoire d'Océanographie Microbienne (LOMIC), Sorbonne Université, Observatoire Océanologique de Banyuls, Banyuls-sur-Mer, France
| | - Boris Eyheraguibel
- CNRS, UMR 6296, Institut de Chimie de Clermont-Ferrand (ICCF), Université Clermont Auvergne, Clermont-Ferrand, France
| | - Gaëtan Burgaud
- CNRS, EA 3882, Université de Brest, Laboratoire Universitaire de Biodiversité et d'Ecologie Microbionne (LUBEM), Plouzané, France
| | - Alexandra Ter Halle
- CNRS, UMR 5623, Laboratoire des Interactions Moléculaires et Réactivité Chimique et Photochimique (IMRCP), Université de Toulouse, Toulouse, France
| | | | - Stephane Bruzaud
- CNRS, UMR 6027, Institut de Recherche Dupuy de Lôme (IRDL), Université de Bretagne-Sud, Lorient, France
| | - Valerie Barbe
- CEA, CNRS, Génomique Métabolique, Genoscope, Institut François Jacob, Univ Evry, Université Paris-Saclay, Evry, France
| | - Jean-Francois Ghiglione
- CNRS, UMR 7621, Laboratoire d'Océanographie Microbienne (LOMIC), Sorbonne Université, Observatoire Océanologique de Banyuls, Banyuls-sur-Mer, France
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88
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Peeters J, Thas O, Shkedy Z, Kodalci L, Musisi C, Owokotomo OE, Dyczko A, Hamad I, Vangronsveld J, Kleinewietfeld M, Thijs S, Aerts J. Exploring the Microbiome Analysis and Visualization Landscape. FRONTIERS IN BIOINFORMATICS 2021; 1:774631. [PMID: 36303773 PMCID: PMC9580862 DOI: 10.3389/fbinf.2021.774631] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/12/2021] [Accepted: 10/29/2021] [Indexed: 02/02/2023] Open
Abstract
Research on the microbiome has boomed recently, which resulted in a wide range of tools, packages, and algorithms to analyze microbiome data. Here we investigate and map currently existing tools that can be used to perform visual analysis on the microbiome, and associate the including methods, visual representations and data features to the research objectives currently of interest in microbiome research. The analysis is based on a combination of a literature review and workshops including a group of domain experts. Both the reviewing process and workshops are based on domain characterization methods to facilitate communication and collaboration between researchers from different disciplines. We identify several research questions related to microbiomes, and describe how different analysis methods and visualizations help in tackling them.
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Affiliation(s)
- Jannes Peeters
- CENSTAT, Data Science Institute (DSI), Hasselt University, Diepenbeek, Belgium
- *Correspondence: Jannes Peeters ,
| | - Olivier Thas
- CENSTAT, Data Science Institute (DSI), Hasselt University, Diepenbeek, Belgium
| | - Ziv Shkedy
- CENSTAT, Data Science Institute (DSI), Hasselt University, Diepenbeek, Belgium
| | - Leyla Kodalci
- CENSTAT, Data Science Institute (DSI), Hasselt University, Diepenbeek, Belgium
| | - Connie Musisi
- CENSTAT, Data Science Institute (DSI), Hasselt University, Diepenbeek, Belgium
| | | | - Aleksandra Dyczko
- VIB Laboratory of Translational Immunomodulation, VIB Center for Inflammation Research (IRC), Hasselt University, Diepenbeek, Belgium
- Department of Immunology and Infection, Biomedical Research Institute (BIOMED), Hasselt University, Diepenbeek, Belgium
| | - Ibrahim Hamad
- VIB Laboratory of Translational Immunomodulation, VIB Center for Inflammation Research (IRC), Hasselt University, Diepenbeek, Belgium
- Department of Immunology and Infection, Biomedical Research Institute (BIOMED), Hasselt University, Diepenbeek, Belgium
| | - Jaco Vangronsveld
- Center for Environmental Sciences, Environmental Biology, Hasselt University, Diepenbeek, Belgium
- Department of Plant Physiology and Biophysics, Faculty of Biology and Biotechnology, Maria Curie–Skłodowska University, Lublin, Poland
| | - Markus Kleinewietfeld
- VIB Laboratory of Translational Immunomodulation, VIB Center for Inflammation Research (IRC), Hasselt University, Diepenbeek, Belgium
- Department of Immunology and Infection, Biomedical Research Institute (BIOMED), Hasselt University, Diepenbeek, Belgium
| | - Sofie Thijs
- Center for Environmental Sciences, Environmental Biology, Hasselt University, Diepenbeek, Belgium
| | - Jan Aerts
- CENSTAT, Data Science Institute (DSI), Hasselt University, Diepenbeek, Belgium
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89
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Calm and Frenzy: marine obligate hydrocarbonoclastic bacteria sustain ocean wellness. Curr Opin Biotechnol 2021; 73:337-345. [PMID: 34768202 DOI: 10.1016/j.copbio.2021.09.015] [Citation(s) in RCA: 20] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/03/2021] [Revised: 09/29/2021] [Accepted: 09/30/2021] [Indexed: 11/03/2022]
Abstract
According to current estimates, the annual volume of crude oil entering the ocean due to both anthropogenic activities and naturally occurring seepages reaches approximately 8.3 million metric tons. Huge discharges from accidents have caused large-scale environmental disasters with extensive damage to the marine ecosystem. The natural clean-up of petroleum spills in marine environments is carried out primarily by naturally occurring obligate hydrocarbonoclastic bacteria (OHCB). The natural hosts of OHCB include a range of marine primary producers, unicellular photosynthetic eukaryotes and cyanobacteria, which have been documented as both, suppliers of hydrocarbon-like compounds that fuel the 'cryptic' hydrocarbon cycle and as a source of isolation of new OHCB. A very new body of evidence suggests that OHCB are not only the active early stage colonizers of plastics and hence the important component of the ocean's 'plastisphere' but also encode an array of enzymes experimentally proven to act on petrochemical and bio-based polymers.
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90
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Agostini L, Moreira JCF, Bendia AG, Kmit MCP, Waters LG, Santana MFM, Sumida PYG, Turra A, Pellizari VH. Deep-sea plastisphere: Long-term colonization by plastic-associated bacterial and archaeal communities in the Southwest Atlantic Ocean. THE SCIENCE OF THE TOTAL ENVIRONMENT 2021; 793:148335. [PMID: 34174607 DOI: 10.1016/j.scitotenv.2021.148335] [Citation(s) in RCA: 26] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/14/2021] [Revised: 05/20/2021] [Accepted: 06/04/2021] [Indexed: 05/20/2023]
Abstract
Marine plastic pollution is a global concern because of continuous release into the oceans over the last several decades. Although recent studies have made efforts to characterize the so-called plastisphere, or microbial community inhabiting plastic substrates, it is not clear whether the plastisphere is defined as a core community or as a random attachment of microbial cells. Likewise, little is known about the influence of the deep-sea environment on the plastisphere. In our experimental study, we evaluated the microbial colonization on polypropylene pellets and two types of plastic bags: regular high density polyethylene (HDPE) and HDPE with the oxo-biodegradable additive BDA. Gravel was used as control. Samples were deployed at three sites at 3300 m depth in the Southwest Atlantic Ocean and left for microbial colonization for 719 days. For microbial communities analysis, DNA was extracted from the biofilm on plastic and gravel substrates, and then the 16S rRNA was sequenced through the Illumina Miseq platform. Cultivation was performed to isolate strains from the plastic and gravel substrates. Substrate type strongly influenced the microbial composition and structure, while no difference between sites was detected. Although several taxa were shared among plastics, we observed some groups specific for each plastic substrate. These communities comprised taxa previously reported from both epipelagic zones and deep-sea benthic ecosystems. The core microbiome (microbial taxa shared by all plastic substrates) was exclusively composed by low abundance taxa, with some members well-described in the plastisphere and with known plastic-degradation capabilities. Additionally, we obtained bacterial strains that have been previously reported inhabiting plastic substrates and/or degrading hydrocarbon compounds, which corroborates our metabarcoding data and suggests the presence of microbial members potentially active and involved with degradation of these plastics in the deep sea.
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Affiliation(s)
- Luana Agostini
- Instituto Oceanográfico, Universidade de São Paulo, Praça do Oceanográfico, 191, São Paulo CEP: 05508-120, Brazil
| | | | - Amanda Gonçalves Bendia
- Instituto Oceanográfico, Universidade de São Paulo, Praça do Oceanográfico, 191, São Paulo CEP: 05508-120, Brazil
| | - Maria Carolina Pezzo Kmit
- Instituto Oceanográfico, Universidade de São Paulo, Praça do Oceanográfico, 191, São Paulo CEP: 05508-120, Brazil
| | - Linda Gwen Waters
- Instituto Oceanográfico, Universidade de São Paulo, Praça do Oceanográfico, 191, São Paulo CEP: 05508-120, Brazil
| | | | - Paulo Yukio Gomes Sumida
- Instituto Oceanográfico, Universidade de São Paulo, Praça do Oceanográfico, 191, São Paulo CEP: 05508-120, Brazil
| | - Alexander Turra
- Instituto Oceanográfico, Universidade de São Paulo, Praça do Oceanográfico, 191, São Paulo CEP: 05508-120, Brazil
| | - Vivian Helena Pellizari
- Instituto Oceanográfico, Universidade de São Paulo, Praça do Oceanográfico, 191, São Paulo CEP: 05508-120, Brazil
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91
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Delacuvellerie A, Benali S, Cyriaque V, Moins S, Raquez JM, Gobert S, Wattiez R. Microbial biofilm composition and polymer degradation of compostable and non-compostable plastics immersed in the marine environment. JOURNAL OF HAZARDOUS MATERIALS 2021; 419:126526. [PMID: 34328083 DOI: 10.1016/j.jhazmat.2021.126526] [Citation(s) in RCA: 32] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/26/2021] [Revised: 06/21/2021] [Accepted: 06/25/2021] [Indexed: 05/21/2023]
Abstract
Different plastic types considered as compostable are found on the market such as petro-based (e.g., polybutylene adipate terephthalate (PBAT)) or bio-based plastics (e.g., polylactic acid, (PLA)). Even if their degradation has been confirmed in industrial compost conditions, investigation of their degradation in natural marine environment has been limited. To better understand biodegradation into natural marine environment, commercial compostable (PBAT, semi-crystalline and amorphous PLA) and non-compostable polymers (low density polyethylene, polystyrene, polyethylene terephthalate, polyvinyl chloride) were submerged in situ on the sediment and in the water column in the Mediterranean Sea. These samples were studied by chemical and microbiological approaches. After 82 days of immersion, no significant bacterial degradation of the different polymers was observed, except some abiotic alterations of PBAT and LDPE probably due to a photooxidation process. However, after 80 days in an enrichment culture containing plastic films as a main carbon source, Marinomonas genus was specifically selected on the PBAT and a weight loss of 12% was highlighted. A better understanding of the bacterial community colonizing these plastics is essential for an eco-design of new biodegradable polymers to allow a rapid degradation in aquatic environment.
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Affiliation(s)
- Alice Delacuvellerie
- Proteomics and Microbiology Department, University of Mons, 20 place du parc, 7000 Mons, Belgium.
| | - Samira Benali
- Polymer and Composite Materials Department, University of Mons, 15 Avenue Maistriau, 7000 Mons, Belgium
| | - Valentine Cyriaque
- Proteomics and Microbiology Department, University of Mons, 20 place du parc, 7000 Mons, Belgium
| | - Sébastien Moins
- Polymer and Composite Materials Department, University of Mons, 15 Avenue Maistriau, 7000 Mons, Belgium
| | - Jean-Marie Raquez
- Polymer and Composite Materials Department, University of Mons, 15 Avenue Maistriau, 7000 Mons, Belgium
| | - Sylvie Gobert
- Oceanology Department, University of Liège, 11 Allée du 6 août, 4000 Liège, Belgium
| | - Ruddy Wattiez
- Proteomics and Microbiology Department, University of Mons, 20 place du parc, 7000 Mons, Belgium
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92
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Coons AK, Busch K, Lenz M, Hentschel U, Borchert E. Biogeography rather than substrate type determines bacterial colonization dynamics of marine plastics. PeerJ 2021; 9:e12135. [PMID: 34603853 PMCID: PMC8445087 DOI: 10.7717/peerj.12135] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/22/2021] [Accepted: 08/18/2021] [Indexed: 01/04/2023] Open
Abstract
Since the middle of the 20th century, plastics have been incorporated into our everyday lives at an exponential rate. In recent years, the negative impacts of plastics, especially as environmental pollutants, have become evident. Marine plastic debris represents a relatively new and increasingly abundant substrate for colonization by microbial organisms, although the full functional potential of these organisms is yet to be uncovered. In the present study, we investigated plastic type and incubation location as drivers of marine bacterial community structure development on plastics, i.e., the Plastisphere, via 16S rRNA amplicon analysis. Four distinct plastic types: high-density polyethylene (HDPE), linear low-density polyethylene (LDPE), polyamide (PA), polymethyl methacrylate (PMMA), and glass-slide controls were incubated for five weeks in the coastal waters of four different biogeographic locations (Cape Verde, Chile, Japan, South Africa) during July and August of 2019. The primary driver of the coastal Plastisphere composition was identified as incubation location, i.e., biogeography, while substrate type did not have a significant effect on bacterial community composition. The bacterial communities were consistently dominated by the classes Alphaproteobacteria, Gammaproteobacteria, and Bacteroidia, irrespective of sampling location or substrate type, however a core bacterial Plastisphere community was not observable at lower taxonomic levels. Overall, this study sheds light on the question of whether bacterial communities on plastic debris are shaped by the physicochemical properties of the substrate they grow on or by the marine environment in which the plastics are immersed. This study enhances the current understanding of biogeographic variability in the Plastisphere by including biofilms from plastics incubated in the previously uncharted Southern Hemisphere.
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Affiliation(s)
- Ashley K Coons
- GEOMAR Helmholtz Centre for Ocean Research Kiel, Kiel, Schleswig-Holstein, Germany
| | - Kathrin Busch
- GEOMAR Helmholtz Centre for Ocean Research Kiel, Kiel, Schleswig-Holstein, Germany
| | - Mark Lenz
- GEOMAR Helmholtz Centre for Ocean Research Kiel, Kiel, Schleswig-Holstein, Germany
| | - Ute Hentschel
- GEOMAR Helmholtz Centre for Ocean Research Kiel, Kiel, Schleswig-Holstein, Germany.,Christian-Albrechts-University Kiel, Kiel, Schleswig-Holstein, Germany
| | - Erik Borchert
- GEOMAR Helmholtz Centre for Ocean Research Kiel, Kiel, Schleswig-Holstein, Germany
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Amaral-Zettler LA, Ballerini T, Zettler ER, Asbun AA, Adame A, Casotti R, Dumontet B, Donnarumma V, Engelmann JC, Frère L, Mansui J, Philippon M, Pietrelli L, Sighicelli M. Diversity and predicted inter- and intra-domain interactions in the Mediterranean Plastisphere. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2021; 286:117439. [PMID: 34438479 DOI: 10.1016/j.envpol.2021.117439] [Citation(s) in RCA: 27] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/17/2021] [Revised: 04/21/2021] [Accepted: 05/19/2021] [Indexed: 06/13/2023]
Abstract
This study investigated the biogeography, the presence and diversity of potentially harmful taxa harbored, and potential interactions between and within bacterial and eukaryotic domains of life on plastic debris in the Mediterranean. Using a combination of high-throughput DNA sequencing (HTS), Causal Network Analysis, and Scanning Electron Microscopy (SEM), we show regional differences and gradients in the Mediterranean microbial communities associated with marine litter, positive causal effects between microbes including between and within domains of life, and how these might impact the marine ecosystems surrounding them. Adjacent seas within the Mediterranean region showed a gradient in the microbial communities on plastic with non-overlapping endpoints (Adriatic and Ligurian Seas). The largest predicted inter-domain effects included positive effects of a novel red-algal Plastisphere member on its potential microbiome community. Freshwater and marine samples housed a diversity of fungi including some related to disease-causing microbes. Algal species related to those responsible for Harmful Blooms (HABs) were also observed on plastic pieces including members of genera not previously reported on Plastic Marine Debris (PMD).
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Affiliation(s)
- Linda A Amaral-Zettler
- NIOZ Royal Netherlands Institute for Sea Research, PO Box 59, 1790 AB, Den Burg (Texel), The Netherlands; Department of Freshwater and Marine Ecology, Institute for Biodiversity and Ecosystem Dynamics, University of Amsterdam, P.O. Box 94240, 1090 GE, Amsterdam, The Netherlands.
| | - Tosca Ballerini
- Association "Expédition MED" - Mer En Danger, 4, Allée des Avettes, 56230, Questembert, France; Thalassa - Marine Research and Science Communication, 40 Rue Francis Davso, 13001, Marseille, France
| | - Erik R Zettler
- NIOZ Royal Netherlands Institute for Sea Research, PO Box 59, 1790 AB, Den Burg (Texel), The Netherlands
| | - Alejandro Abdala Asbun
- NIOZ Royal Netherlands Institute for Sea Research, PO Box 59, 1790 AB, Den Burg (Texel), The Netherlands
| | - Alvaro Adame
- Stazione Zoologica Anton Dohrn, Villa Comunale, 80121, Napoli, Italy
| | - Raffaella Casotti
- Stazione Zoologica Anton Dohrn, Villa Comunale, 80121, Napoli, Italy
| | - Bruno Dumontet
- Association "Expédition MED" - Mer En Danger, 4, Allée des Avettes, 56230, Questembert, France
| | | | - Julia C Engelmann
- NIOZ Royal Netherlands Institute for Sea Research, PO Box 59, 1790 AB, Den Burg (Texel), The Netherlands
| | - Laura Frère
- Association "Expédition MED" - Mer En Danger, 4, Allée des Avettes, 56230, Questembert, France
| | - Jeremy Mansui
- Association "Expédition MED" - Mer En Danger, 4, Allée des Avettes, 56230, Questembert, France
| | - Marion Philippon
- Association "Expédition MED" - Mer En Danger, 4, Allée des Avettes, 56230, Questembert, France
| | - Loris Pietrelli
- Chemistry Department - Sapienza University of Rome, P.le Aldo Moro 5, 00185, Roma, Italy
| | - Maria Sighicelli
- Italian National Agency for New Technologies, Energy and Sustainable Economic Development (ENEA) CR Casaccia, Via Anguillarese 301, 00123, Rome, Italy
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94
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Binda G, Spanu D, Monticelli D, Pozzi A, Bellasi A, Bettinetti R, Carnati S, Nizzetto L. Unfolding the interaction between microplastics and (trace) elements in water: A critical review. WATER RESEARCH 2021; 204:117637. [PMID: 34536685 DOI: 10.1016/j.watres.2021.117637] [Citation(s) in RCA: 45] [Impact Index Per Article: 11.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/18/2021] [Revised: 07/13/2021] [Accepted: 09/02/2021] [Indexed: 05/21/2023]
Abstract
Plastic and microplastic pollution is an environmental and societal concern. The interaction of plastic with organic chemicals in the environment has attracted scientific interest. New evidences have highlighted an unexpectedly high affinity of environmental plastics also for metal ions. The degree and typology of plastic ageing (including from mechanical, UV and biological degradations) appear as a pivotal factor determining such an interaction. These earlier evidences recently opened a new research avenue in the plastic pollution area. This review is the first to organize and critically discuss knowledge developed so far. Results from field and laboratory studies of metal accumulation on plastic are presented and the environmental factors most likely to control such an interaction are discussed. On the light of this knowledge, a generalist conceptual model useful for building hypotheses on the mechanisms at stake and directing future studies was elaborated and presented here. Furthermore, all available data on the thermodynamics of the plastic-metal interaction obtained from laboratory experiments are inventoried and discussed here, highlighting methodological and technical challenges that can potentially affect cross-comparability of data and their relevance for environmental settings. Finally, insights and recommendations on experimental approaches and analytical techniques that can help overtaking current limitations and knowledge gaps are proposed.
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Affiliation(s)
- Gilberto Binda
- Department of Science and High Technology, University of Insubria, Via Valleggio 11, 22100 Como, Italy; Norwegian Institute for Water Research (NIVA), Gaustadalléen 21, 0349 Oslo, Norway.
| | - Davide Spanu
- Department of Science and High Technology, University of Insubria, Via Valleggio 11, 22100 Como, Italy
| | - Damiano Monticelli
- Department of Science and High Technology, University of Insubria, Via Valleggio 11, 22100 Como, Italy
| | - Andrea Pozzi
- Department of Science and High Technology, University of Insubria, Via Valleggio 11, 22100 Como, Italy
| | - Arianna Bellasi
- Department of Science and High Technology, University of Insubria, Via Valleggio 11, 22100 Como, Italy
| | - Roberta Bettinetti
- Department of Human and Innovation for the Territory, University of Insubria, Via Valleggio 11, 22100 Como, Italy
| | - Stefano Carnati
- Department of Science and High Technology, University of Insubria, Via Valleggio 11, 22100 Como, Italy
| | - Luca Nizzetto
- Norwegian Institute for Water Research (NIVA), Gaustadalléen 21, 0349 Oslo, Norway; RECETOX, Masarik University, Kamenice 753/5, 625 00 Brno, Czech Republic.
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95
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Moshood TD, Nawanir G, Mahmud F. Sustainability of biodegradable plastics: a review on social, economic, and environmental factors. Crit Rev Biotechnol 2021; 42:892-912. [PMID: 34530658 DOI: 10.1080/07388551.2021.1973954] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
Abstract
In line with the recent economic growth, especially in developing countries, human concern for the environment has increased over time. This paradigm shift has influenced many developing countries to pay more attention to the issues related to the use of synthetic plastics. Both industry and consumers are intrigued to discover the: economic characteristics, environmental consequences, and social attitudes to the benefits of biodegradable plastics. Biodegradable plastics are useful in packaging, agriculture, gastronomy, consumer electronics, and the automotive industry. This paper seeks to explain the prospects of biodegradable plastics regarding social, economic, and environmental sustainability and recognizes the latest advances in enzyme-based biodegradation of plastics in order to reduce plastics' negative effects and to make the environment safe. A multi-disciplinary strategy is a unique approach, with studies carried out across the triple bottom line (TBL) approach on three distinct sustainability concepts (economic characteristics, environmental consequences, and social attitudes). These three subjects were carefully chosen for their respective targets. This paper has used ATLAS.ti 9 software tools to thoroughly analyze the literature to save, identify, and assess this study's data. Therefore, the research showed that the environmental component was the most critical factor with the economic second and social third. We review bio-based and biodegradable polymers and highlight the value of biodegradable end-of-life management.
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Affiliation(s)
- Taofeeq D Moshood
- Faculty of Industrial Management, Universiti Malaysia Pahang, Gambang, Malaysia
| | - Gusman Nawanir
- Faculty of Industrial Management, Universiti Malaysia Pahang, Gambang, Malaysia
| | - Fatimah Mahmud
- Faculty of Industrial Management, Universiti Malaysia Pahang, Gambang, Malaysia
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96
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Muriel-Millán LF, Millán-López S, Pardo-López L. Biotechnological applications of marine bacteria in bioremediation of environments polluted with hydrocarbons and plastics. Appl Microbiol Biotechnol 2021; 105:7171-7185. [PMID: 34515846 DOI: 10.1007/s00253-021-11569-4] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/18/2021] [Revised: 08/31/2021] [Accepted: 09/01/2021] [Indexed: 11/25/2022]
Abstract
Marine ecosystems are some of the most adverse environments on Earth and contain a considerable portion of the global bacterial population, and some of these bacterial species play pivotal roles in several biogeochemical cycles. Marine bacteria have developed different molecular mechanisms to address fluctuating environmental conditions, such as changes in nutrient availability, salinity, temperature, pH, and pressure, making them attractive for use in diverse biotechnology applications. Although more than 99% of marine bacteria cannot be cultivated with traditional microbiological techniques, several species have been successfully isolated and grown in the laboratory, facilitating investigations of their biotechnological potential. Some of these applications may contribute to addressing some current global problems, such as environmental contamination by hydrocarbons and synthetic plastics. In this review, we first summarize and analyze recently published information about marine bacterial diversity. Then, we discuss new literature regarding the isolation and characterization of marine bacterial strains able to degrade hydrocarbons and petroleum-based plastics, and species able to produce biosurfactants. We also describe some current limitations for the implementation of these biotechnological tools, but also we suggest some strategies that may contribute to overcoming them. KEY POINTS: • Marine bacteria have a great metabolic capacity to degrade hydrocarbons in harsh conditions. • Marine environments are an important source of new bacterial plastic-degrading enzymes. • Secondary metabolites from marine bacteria have diverse potential applications in biotechnology.
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Affiliation(s)
- Luis Felipe Muriel-Millán
- Departamento de Microbiología Molecular, Instituto de Biotecnología, Universidad Nacional Autónoma de México, Av. Universidad 2001, Col. Chamilpa, 62210, Cuernavaca, Morelos, Mexico.
- Departamento de Biología Molecular y Biotecnología, Instituto de Investigaciones Biomédicas, Universidad Nacional Autónoma de México, 04510, Ciudad Universitaria, CDMX, Mexico.
| | - Sofía Millán-López
- Departamento de Microbiología Molecular, Instituto de Biotecnología, Universidad Nacional Autónoma de México, Av. Universidad 2001, Col. Chamilpa, 62210, Cuernavaca, Morelos, Mexico
| | - Liliana Pardo-López
- Departamento de Microbiología Molecular, Instituto de Biotecnología, Universidad Nacional Autónoma de México, Av. Universidad 2001, Col. Chamilpa, 62210, Cuernavaca, Morelos, Mexico
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97
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Amaral-Zettler LA, Zettler ER, Mincer TJ, Klaassen MA, Gallager SM. Biofouling impacts on polyethylene density and sinking in coastal waters: A macro/micro tipping point? WATER RESEARCH 2021; 201:117289. [PMID: 34102596 DOI: 10.1016/j.watres.2021.117289] [Citation(s) in RCA: 76] [Impact Index Per Article: 19.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/16/2021] [Revised: 05/06/2021] [Accepted: 05/22/2021] [Indexed: 05/21/2023]
Abstract
Biofouling causing an increase in plastic density and sinking is one of the hypotheses to account for the unexpectedly low amount of buoyant plastic debris encountered at the ocean surface. Field surveys show that polyethylene and polypropylene, the two most abundant buoyant plastics, both occur below the surface and in sediments, and experimental studies confirm that biofouling can cause both of these plastics to sink. However, studies quantifying the actual density of fouled plastics are rare, despite the fact that density will determine the transport and eventual fate of plastic in the ocean. Here we investigated the role of microbial biofilms in sinking of polyethylene microplastic and quantified the density changes natural biofouling communities cause in the coastal waters of the North Sea. Molecular data confirmed the variety of bacteria and eukaryotes (including animals and other multicellular organisms) colonizing the plastic over time. Fouling communities increased the density of plastic and caused sinking, and the plastic remained negatively buoyant even during the winter with lower growth rates. Relative surface area alone, however, did not predict whether a plastic piece sank. Due to patchy colonization, fragmentation of sinking pieces may result in smaller pieces regaining buoyancy and returning to the surface. Our results suggest that primarily multicellular organisms cause sinking of plastic pieces with surface area to volume ratios (SA:V) below 100 (generally pieces above a couple hundred micrometers in size), and that this is a "tipping point" at which microbial biofilms become the key players causing sinking of smaller pieces with higher SA:V ratios, including most fibers that are too small for larger (multicellular) organisms to colonize.
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Affiliation(s)
- Linda A Amaral-Zettler
- NIOZ Royal Netherlands Institute for Sea Research, P.O. Box 59, 1790 AB Den Burg, The Netherlands; Department of Freshwater and Marine Ecology, Institute for Biodiversity and Ecosystem Dynamics, The University of Amsterdam, 1090 GE Amsterdam, The Netherlands; The Josephine Bay Paul Center for Comparative Molecular Biology and Evolution, Marine Biological Laboratory, Woods Hole, MA 02543, USA.
| | - Erik R Zettler
- NIOZ Royal Netherlands Institute for Sea Research, P.O. Box 59, 1790 AB Den Burg, The Netherlands
| | - Tracy J Mincer
- Harbor Branch Oceanographic Institute, Florida Atlantic University, Fort Pierce, FL 34946, USA
| | - Michiel A Klaassen
- NIOZ Royal Netherlands Institute for Sea Research, P.O. Box 59, 1790 AB Den Burg, The Netherlands; Department of Freshwater and Marine Ecology, Institute for Biodiversity and Ecosystem Dynamics, The University of Amsterdam, 1090 GE Amsterdam, The Netherlands
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98
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Galafassi S, Sabatino R, Sathicq MB, Eckert EM, Fontaneto D, Dalla Fontana G, Mossotti R, Corno G, Volta P, Di Cesare A. Contribution of microplastic particles to the spread of resistances and pathogenic bacteria in treated wastewaters. WATER RESEARCH 2021; 201:117368. [PMID: 34186288 DOI: 10.1016/j.watres.2021.117368] [Citation(s) in RCA: 58] [Impact Index Per Article: 14.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/01/2021] [Revised: 06/09/2021] [Accepted: 06/11/2021] [Indexed: 06/13/2023]
Abstract
Microplastic Particles (MPs) are ubiquitous pollutants widely found in aquatic ecosystems. Although MPs are mostly retained in wastewater treatment plants (WWTPs), a high number of MPs reaches the open waters potentially contributing to the spread of pathogenic bacteria and antibiotic resistance genes in the environment. Nowadays, a limited number of studies have focused on the role of MPs as carriers of potentially pathogenic and antibiotic resistant bacteria in WWTPs. Thus, an investigation on the community composition (by 16S rRNA gene amplicon sequencing) and the abundance of antibiotic and metal resistance genes (by qPCR) of the biofilm on MPs (the plastisphere) and of planktonic bacteria in treated (pre- and post-disinfection) wastewaters was performed. MPs resulted to be very similar in terms of type, color, size, and chemical composition, before and after the disinfection. The bacterial community on MPs differed from the planktonic community in terms of richness, composition, and structure of the community network. Potentially pathogenic bacteria generally showed higher abundances in treated wastewater than in the biofilm on MPs. Furthermore, among the tested resistance genes, only sul2 (a common resistance gene against sulfonamides) resulted to be more abundant in the plastisphere than in the planktonic bacterial community. Our results suggest that the wastewater plastisphere could promote the spread of pathogenic bacteria and resistance genes in aquatic environment although with a relatively lower contribution than the wastewater planktonic bacterial community.
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Affiliation(s)
- Silvia Galafassi
- CNR - Water Research Institute, Largo V. Tonolli 50, 28922, Verbania, Italy
| | - Raffaella Sabatino
- CNR - Water Research Institute, Largo V. Tonolli 50, 28922, Verbania, Italy
| | | | - Ester M Eckert
- CNR - Water Research Institute, Largo V. Tonolli 50, 28922, Verbania, Italy
| | - Diego Fontaneto
- CNR - Water Research Institute, Largo V. Tonolli 50, 28922, Verbania, Italy
| | - Giulia Dalla Fontana
- CNR - Istituto di Sistemi e Tecnologie Industriali Intelligenti per il Manifatturiero Avanzato, Corso G. Pella, 16, 13900, Biella, Italy
| | - Raffaella Mossotti
- CNR - Istituto di Sistemi e Tecnologie Industriali Intelligenti per il Manifatturiero Avanzato, Corso G. Pella, 16, 13900, Biella, Italy
| | - Gianluca Corno
- CNR - Water Research Institute, Largo V. Tonolli 50, 28922, Verbania, Italy
| | - Pietro Volta
- CNR - Water Research Institute, Largo V. Tonolli 50, 28922, Verbania, Italy
| | - Andrea Di Cesare
- CNR - Water Research Institute, Largo V. Tonolli 50, 28922, Verbania, Italy.
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99
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Jacquin J, Callac N, Cheng J, Giraud C, Gorand Y, Denoual C, Pujo-Pay M, Conan P, Meistertzheim AL, Barbe V, Bruzaud S, Ghiglione JF. Microbial Diversity and Activity During the Biodegradation in Seawater of Various Substitutes to Conventional Plastic Cotton Swab Sticks. Front Microbiol 2021; 12:604395. [PMID: 34335485 PMCID: PMC8321090 DOI: 10.3389/fmicb.2021.604395] [Citation(s) in RCA: 24] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/09/2020] [Accepted: 05/12/2021] [Indexed: 11/13/2022] Open
Abstract
The European Parliament recently approved a new law banning single-use plastic items for 2021 such as plastic plates, cutlery, straws, cotton swabs, and balloon sticks. Transition to a bioeconomy involves the substitution of these banned products with biodegradable materials. Several materials such as polylactic acid (PLA), polybutylene adipate terephthalate (PBAT), poly(butylene succinate) (PBS), polyhydroxybutyrate-valerate (PHBV), Bioplast, and Mater-Bi could be good candidates to substitute cotton swabs, but their biodegradability needs to be tested under marine conditions. In this study, we described the microbial life growing on these materials, and we evaluated their biodegradability in seawater, compared with controls made of non-biodegradable polypropylene (PP) or biodegradable cellulose. During the first 40 days in seawater, we detected clear changes in bacterial diversity (Illumina sequencing of 16S rRNA gene) and heterotrophic activity (incorporation of 3H-leucine) that coincided with the classic succession of initial colonization, growth, and maturation phases of a biofilm. Biodegradability of the cotton swab sticks was then tested during another 94 days under strict diet conditions with the different plastics as sole carbon source. The drastic decrease of the bacterial activity on PP, PLA, and PBS suggested no bacterial attack of these materials, whereas the bacterial activity in PBAT, Bioplast, Mater-Bi, and PHBV presented similar responses to the cellulose positive control. Interestingly, the different bacterial diversity trends observed for biodegradable vs. non-biodegradable plastics allowed to describe potential new candidates involved in the degradation of these materials under marine conditions. This better understanding of the bacterial diversity and activity dynamics during the colonization and biodegradation processes contributes to an expanding baseline to understand plastic biodegradation in marine conditions and provide a foundation for further decisions on the replacement of the banned single-used plastics.
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Affiliation(s)
- Justine Jacquin
- CNRS, UMR 7621, Laboratoire d'Océanographie Microbienne, Observatoire Océanologique de Banyuls, Sorbonne Université, Paris, France.,Innovation Plasturgie et Composites, Biopole Clermont Limagne, Saint-Beauzire, France
| | - Nolwenn Callac
- CNRS, UMR 7621, Laboratoire d'Océanographie Microbienne, Observatoire Océanologique de Banyuls, Sorbonne Université, Paris, France.,CNRS, UMR 9220 ENTROPIE, Ifremer (LEAD-NC), IRD, Univ Nouvelle-Calédonie, Univ La Réunion, Nouméa, New Caledonia
| | - Jingguang Cheng
- CNRS, UMR 7621, Laboratoire d'Océanographie Microbienne, Observatoire Océanologique de Banyuls, Sorbonne Université, Paris, France
| | - Carolane Giraud
- CNRS, UMR 7621, Laboratoire d'Océanographie Microbienne, Observatoire Océanologique de Banyuls, Sorbonne Université, Paris, France.,CNRS, UMR 9220 ENTROPIE, Ifremer (LEAD-NC), IRD, Univ Nouvelle-Calédonie, Univ La Réunion, Nouméa, New Caledonia
| | - Yonko Gorand
- Plateforme EnRMAT, Laboratoire PROMES, Rembla de la Thermodynamique, Perpignan, France
| | - Clement Denoual
- UMR CNRS 6027, Institut de Recherche Dupuy de Lôme (IRDL), Université de Bretagne-Sud, Lorient, France
| | - Mireille Pujo-Pay
- CNRS, UMR 7621, Laboratoire d'Océanographie Microbienne, Observatoire Océanologique de Banyuls, Sorbonne Université, Paris, France
| | - Pascal Conan
- CNRS, UMR 7621, Laboratoire d'Océanographie Microbienne, Observatoire Océanologique de Banyuls, Sorbonne Université, Paris, France
| | | | - Valerie Barbe
- Génomique Métabolique, Genoscope, Institut François Jacob, CEA, CNRS, Univ Evry, Université Paris-Saclay, Evry, France
| | - Stéphane Bruzaud
- UMR CNRS 6027, Institut de Recherche Dupuy de Lôme (IRDL), Université de Bretagne-Sud, Lorient, France
| | - Jean-François Ghiglione
- CNRS, UMR 7621, Laboratoire d'Océanographie Microbienne, Observatoire Océanologique de Banyuls, Sorbonne Université, Paris, France
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100
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Nelson TF, Reddy CM, Ward CP. Product Formulation Controls the Impact of Biofouling on Consumer Plastic Photochemical Fate in the Ocean. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2021; 55:8898-8907. [PMID: 34132543 DOI: 10.1021/acs.est.1c02079] [Citation(s) in RCA: 20] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/14/2023]
Abstract
The photodegradation rates of floating marine plastics govern their environmental lifetimes, but the controls on this process remain poorly understood. Photodegradation of these materials has so far been studied under ideal conditions in the absence of environmental factors such as biofouling, which may slow photochemical transformation rates through light screening. To investigate this interaction, we incubated different plastics in continuous flow seawater mesocosms to follow (i) the extent of biofilm growth on the samples and (ii) decreases in light transmittance through the samples over time. We used consumer products with high relevance (e.g., shopping bags, water bottles, and packaging materials) and with different formulations, referring to primary polymers (polyethylene (PE) and polyethylene terephthalate (PET)) and inorganic additives (titanium dioxide (TiO2)). The behavior of consumer-relevant formulations was compared to those of pure PE and PET films, revealing that the relative effects of UV- and, to a lesser extent, visible-light screening differ based on the formulation of the product. Pure PE showed greater relative UV-transmittance decreases (Δ = -34% through the entire sample, accounting for biofilm on both sides of the plastic film) than PET (Δ = -20%) and PE products with TiO2 (Δ = < -10%). Our results demonstrate that even with biofouling, photodegradation remains a highly relevant process for the fate of marine plastics. However, we expect photodegradation rates of plastics in the ocean to be slower than those measured in laboratory studies, due to light screening by biofilms, and the specific formulation of plastic products is a key determinant of the extent of this effect.
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Affiliation(s)
- Taylor F Nelson
- Department of Marine Chemistry and Geochemistry, Woods Hole Oceanographic Institution, Woods Hole, Massachusetts 02543, United States
| | - Christopher M Reddy
- Department of Marine Chemistry and Geochemistry, Woods Hole Oceanographic Institution, Woods Hole, Massachusetts 02543, United States
| | - Collin P Ward
- Department of Marine Chemistry and Geochemistry, Woods Hole Oceanographic Institution, Woods Hole, Massachusetts 02543, United States
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