Using biofilms for monitoring metal contamination in lotic ecosystems: The protective effects of hardness and pH on metal bioaccumulation

Advances in the integration of microalgal communities for biomonitoring of metal pollution in aquatic ecosystems of sub-Saharan Africa

This review elucidated the recent advances in integrating microalgal communities in monitoring metal pollution in aquatic ecosystems of sub-Saharan Africa (SSA). It also highlighted the potential of incorporating microalgae as bioindicators in emerging technologies, identified research gaps, and suggested directions for further research in biomonitoring of metal pollution. Reputable online scholarly databases were used to identify research articles published between January 2000 and June 2023 for synthesis. Results indicated that microalgae were integrated either individually or combined with other bioindicators, mainly macroinvertebrates, macrophytes, and fish, alongside physicochemical monitoring. There was a significantly low level of integration (< 1%) of microalgae for biomonitoring aquatic metal pollution in SSA compared to other geographical regions. Microalgal communities were employed to assess compliance (76%), in diagnosis (38%), and as early-warning systems (38%) of aquatic ecological health status. About 14% of biomonitoring studies integrated microalgal eDNA, while other technologies, such as remote sensing, artificial intelligence, and biosensors, are yet to be significantly incorporated. Nevertheless, there is potential for the aforementioned emerging technologies for monitoring aquatic metal pollution in SSA. Future monitoring in the region should also consider the standardisation and synchronisation of integrative biomonitoring and embrace the "Citizen Science" concept at national and regional scales.

Meta-metabolomic responses of river biofilms to cobalt exposure and use of dose-response model trends as an indicator of effects

The response of the meta-metabolome is rarely used to characterize the effects of contaminants on a whole community. Here, the meta-metabolomic fingerprints of biofilms were examined after 1, 3 and 7 days of exposure to five concentrations of cobalt (from background concentration to 1 × 10-5 M) in aquatic microcosms. The untargeted metabolomic data were processed using the DRomics tool to build dose-response models and to calculate benchmark-doses. This approach made it possible to use 100% of the chemical signal instead of being limited to the very few annotated metabolites (7%). These benchmark-doses were further aggregated into an empirical cumulative density function. A trend analysis of the untargeted meta-metabolomic feature dose-response curves after 7 days of exposure suggested the presence of a concentration range inducing defense responses between 1.7 × 10-9 and 2.7 × 10-6 M, and of a concentration range inducing damage responses from 2.7 × 10-6 M and above. This distinction was in good agreement with changes in the other biological parameters studied (biomass and chlorophyll content). This study demonstrated that the molecular defense and damage responses can be related to contaminant concentrations and represents a promising approach for environmental risk assessment of metals.

Exposure and recovery: The effect of different dilution factors of treated and untreated metal mining effluent on freshwater biofilm function and structure

Abandoned mines generate effluents rich in heavy metals, and these contaminants are released uncontrolled into the nearby aquatic ecosystems, causing severe pollution. However, no real solution exists, leaving a legacy of global pollution. In this study, the efficiency of the treatment technologies in reducing the ecological impacts of mining effluents to freshwater ecosystems with different dilution capacities was tested using biofilm communities as biological indicators. The functional and structural recovery capacity of biofilm communities after 21 days of exposure was assessed. With this aim, we sampled aquatic biofilms from a pristine stream and exposed them to treated (T) and untreated (U) metal mining effluent from Frongoch abandoned mine (Mid Wales, UK). Additionally, we simulated two different flow conditions for the receiving stream: high dilution (HD) and low dilution (LD). After exposure, the artificial streams were filled with artificial water for 14 days to assess the biofilm recovery. Unexposed biofilm served as control for biofilm responses (functional and structural) measured throughout time. During the exposure, short term effects on biofilm functioning (photosynthetic efficiency, nutrient uptake) were observed in T-LD, U-HD, and U-LD, whereas long term effects (community composition, chl-a, and diatom metrics) were observed on the structure of all biofilms exposed to the treated and untreated mining effluent. On the other hand, metal accumulation occurred in biofilms exposed to the mining effluents. However, a functional recovery was observed for all treatments, except in the U-LD in which biofilm structure did not present a significant recovery after the exposure period. The results presented here highlight the need to consider the dilution capacity of the receiving stream to assess the real efficiency of treatment technologies applied to mining effluents to mitigate the ecological impact on freshwater ecosystems.

Distinct dynamics in mountain watersheds: Exploring mercury and microplastic pollution-Unraveling the influence of atmospheric deposition, human activities, and hydrology

The intensification of human activities all around the globe has led to the spread of micropollutants in high-mountain freshwater environments. We therefore aimed to assess the geospatial distribution and determine the potential sources of (total-) mercury (THg) and microplastics (MPs) in mountain freshwater ecosystems. To do so, we analyzed THg and MP concentrations in brown trout, biofilm, and sediments from lotic and lentic ecosystems in the Pyrenees - all subjected to different types of human pressure. Additionally, we assessed the potential impacts of these pollutants on fish, and explored the bioindication capacity of brown trout (Salmo trutta fario) and biofilm regarding THg and MP pollution. For the first time, we measured concentrations of MPs trapped in the matrix of freshwater biofilm. Our results suggest that THg in the Pyrenees might be explained by both legacy (regional) and distant sources, in combination with environmental characteristics such as the presence of peatlands or streamwater physicochemistry, while MPs in fish are linked to recent local pollution sources such as single-use plastics. In contrast, MPs in biofilm matrix and sediments indicate a combination of distant (i.e., atmospheric deposition) and recent local pollution sources. Moreover, hydrodynamics and plastic density likely control MP distribution in rivers. Based on Fulton's condition factor, we also found that higher THg concentrations caused a negative impact on fish health (K < 1), while no impact of MPs could be seen. Therefore, we suggest that brown trout and biofilm can serve as bioindicators of atmospheric deposition of THg in high-altitude lakes and that biofilm is a reliable bioindicator to assess MP pollution in remote environments. Brown trout may also act as a bioindicator of MP pollution, but only efficiently in more polluted areas.

Heavy metal removal by the photosynthetic microbial biomat found within shallow unit process open water constructed wetlands

Nature-based solutions offer a sustainable alternative to labor and chemical intensive engineered treatment of metal-impaired waste streams. Shallow, unit process open water (UPOW) constructed wetlands represent a novel design where benthic photosynthetic microbial mats (biomat) coexist with sedimentary organic matter and inorganic (mineral) phases, creating an environment for multiple-phase interactions with soluble metals. To query the interplay of dissolved metals with inorganic and organic fractions, biomat was harvested from two distinct systems: the demonstration-scale UPOW within the Prado constructed wetlands complex ("Prado biomat", 88 % inorganic) and a smaller pilot-scale system ("Mines Park (MP) biomat", 48 % inorganic). Both biomats accumulated detectable background concentrations of metals of toxicological concern (Zn, Cu, Pb, and Ni) by assimilation from waters that did not exceed regulatory thresholds for these metals. Augmentation in laboratory microcosms with a mixture of these metals at ecotoxicologically relevant concentrations revealed a further capacity for metal removal (83-100 %). Experimental concentrations encapsulated the upper range of surface waters in the metal-impaired Tambo watershed in Peru, where a passive treatment technology such as this could be applied. Sequential extractions demonstrated that metal removal by mineral fractions is more important in Prado than MP biomat, possibly due to a higher proportion and mass of iron and other minerals from Prado-derived materials. Geochemical modeling using PHREEQC suggests that in addition to sorption/surface complexation of metals to mineral phases (modeled as iron (oxyhydr)oxides), diatom and bacterial functional groups (carboxyl, phosphoryl, and silanol) also play an important role in soluble metal removal. By comparing sequestered metal phases across these biomats with differing inorganic content, we propose that sorption/surface complexation and incorporation/assimilation of both inorganic and organic constituents of the biomat play a dominant role in metal removal potential by UPOW wetlands. This knowledge could be applied to passively treat metal impaired waters in analogous and remote regions.

Vulnerability and tolerance to nickel of periphytic biofilm harvested in summer and winter

Metals are naturally present in freshwater ecosystems but anthropogenic activities like mining operations represent a long-standing concern. Metals released into aquatic environments may affect microbial communities such as periphytic biofilm, which plays a key role as a primary producer in stream ecosystems. Using two 28-day microcosm studies involving two different photoperiods (light/dark cycle of 16/8 vs 8/16), the present study assessed the effects of four increasing nickel (Ni) concentrations (0-6 μM) on two natural biofilm communities collected at different seasons (summer and winter). The two communities were characterized by different structural profiles and showed significant differences in Ni accumulated content for each treatment. For instance, the biofilm metal content was four times higher in the case of summer biofilm at the highest Ni treatment and after 28 days of exposure. Biomarkers examined targeted both heterotrophic and autotrophic organisms. For heterotrophs, the β-glucosidase and β-glucosaminidase showed no marked effects of Ni exposure and were globally similar between the two communities suggesting low toxicity. However, the photosynthetic yield confirmed the toxicity of Ni on autotrophs with maximum inhibition of 81 ± 7% and 60 ± 1% respectively for the summer and winter biofilms. Furthermore, biofilms previously exposed to the highest long-term Ni concentration ([Ni²⁺] = 6 μM) revealed no acute effects in subsequent toxicity based on the PSII yield, suggesting a tolerance acquisition by the phototrophic community. Taken together, the results suggest that the biofilm response to Ni exposure was dependent of the function considered and that descriptors such as biofilm metal content could be seasonally dependent, information of great importance in a context of biomonitoring.

Temperature and Photoperiod Affect the Sensitivity of Biofilms to Nickel and its Accumulation

Whereas metal impacts on fluvial communities have been extensively investigated, effects of abiotic parameters on community responses to contaminants are poorly documented. Variations in photoperiod and temperature commonly occur over the course of a season and could affect aquatic biofilm communities and their responses to contaminants. Our objective was to characterize the influence of environmental conditions (photoperiod and temperature) on nickel (Ni) bioaccumulation and toxicity using a laboratory-grown biofilm. Environmental parameters were chosen to represent variations that can occur over the summer season. Biofilms were exposed for 7 days to six dissolved Ni treatments (ranging from 6 to 115 µM) at two temperatures (14 and 20 °C) using two photoperiods (16:8 and 12:12-h light:dark cycle). Under these different scenarios, structural (dry weight biomass and chlorophyll-a) and functional biomarkers (photosynthetic yield and Ni content) were analyzed at four sampling dates, allowing us to evaluate Ni sensitivity of biofilms over time. The results highlight the effects of temperature on Ni accumulation and tolerance of biofilms. Indeed, biofilms exposed at 20 °C accumulated 1.6-4.2-fold higher concentrations of Ni and were characterized by a lower median effect concentration value using photosynthetic yield compared with those exposed at 14 °C. In terms of photoperiod, significantly greater rates of Ni accumulation were observed at the highest tested Ni concentration for biofilms exposed to a 12:12-h compared with a 16:8-h light:dark cycle. Our study demonstrates the influence of temperature on biofilm metabolism and illustrates that environmental factors may influence Ni accumulation response and thus Ni responses of phototrophic biofilms. Environ Toxicol Chem 2022;41:1649-1662. © 2022 SETAC.

Exploring the role of water chemistry on metal accumulation in biofilms from streams in mining areas

Biofilms play a key role in aquatic ecosystems. They are ubiquitous, even in the most contaminated ecosystems, and have great potential as biomonitors of exposure to contaminants such as metals. Freshwater biofilms and surface waters were sampled in two active mining areas of Canada: in the northern part of Nunavik (Quebec) and in the Greater Sudbury area (Ontario). Significant linear relationships were found between both total dissolved and free metal ion concentrations with biofilm metal contents for Cu and Ni, but not for Cd. When pH was below 6, biofilms accumulated less metals than at higher pHs. These results confirm that protons have a protective effect, leading to lower internalized metal concentrations. When considering only the sites where pH was above 6, the linear relationships between metal concentrations in water and in biofilms were improved for all three studied metals. The presence of metal ions could also modify the internalization of a given metal. To further study the role of cations as competitors to Cu, Ni and Cd uptake, relationships between the ratio of biofilm metal contents (Cu, Ni and Cd) on the ambient free metal ion concentrations were built as a function of potential cation competitors, such as major cations and metals. Surprisingly, our data suggest that calcium plays a minor role in preventing metal accumulation as compared to magnesium and possibly other metals. At a global scale, metal accumulation remained highly consistent between the two studied regions and over the sampling period, despite differences in ambient physicochemical water characteristics, climate or types of ecosystems. Metal bioaccumulation is thus a promising biomarker to assess metal bioavailability in a mining context. Nevertheless, more data are still required to further highlight the contribution of each competitor in metal accumulation by biofilms and to be able to build a unifying predictive model.

A pilot experiment to assess the efficiency of pharmaceutical plant wastewater treatment and the decreasing effluent toxicity to periphytic biofilms

Pharmaceutical industry effluents are complex and highly variable in time. Assessing the efficiency of a pharmaceutical industry wastewater treatment plant (WWTP) and the resulting decrease in effluent toxicity and ecological risk is thus not straightforward. We set up an original in situ pilot directly connected to a pharmaceutical WWTP to monitor the chronic toxicity of successive effluents using natural periphytic biofilms. Their structural and functional responses to effluent exposure were assessed by combining (i) a molecular approach to characterize the bacterial and diatom diversity and (ii) functional measurements of photosynthetic and enzyme activities. Effluent contamination by pharmaceuticals strongly decreased after the quaternary treatment (activated carbon). Most of the structural biological characteristics improved with cumulative WWTP treatment (bacterial diversity, microbial genetic structure, and biological diatom index), showing community recovery along the treatment process. However, functional parameters did not show clear links with treatment steps, suggesting that microbial activities were not solely driven by pharmaceuticals produced during the experimental period. Operationally, this type of pilot system offers a useful tool for biomonitoring approaches and offers new approaches for industrial managers to assess the ecological risk of production effluents in receiving water.

Role of Biofilms in Contaminant Bioaccumulation and Trophic Transfer in Aquatic Ecosystems: Current State of Knowledge and Future Challenges

In freshwater environments, microbial assemblages attached to submerged substrates play an essential role in ecosystem processes such as primary production, supported by periphyton, or organic matter decomposition, supported by microbial communities attached to leaf litter or sediments. These microbial assemblages, also called biofilms, are not only involved in nutrients fluxes but also in contaminants dynamics. Biofilms can accumulate metals and organic contaminants transported by the water flow and/or adsorbed onto substrates. Furthermore, due to their high metabolic activity and their role in aquatic food webs, microbial biofilms are also likely to influence contaminant fate in aquatic ecosystems. In this review, we provide (1) a critical overview of the analytical methods currently in use for detecting and quantifying metals and organic micropollutants in microbial biofilms attached to benthic substrata (rocks, sediments, leaf litter); (2) a review of the distribution of those contaminants within aquatic biofilms and the role of these benthic microbial communities in contaminant fate; (3) a set of future challenges concerning the role of biofilms in contaminant accumulation and trophic transfers in the aquatic food web. This literature review highlighted that most knowledge on the interaction between biofilm and contaminants is focused on contaminants dynamics in periphyton while technical limitations are still preventing a thorough estimation of contaminants accumulation in biofilms attached to leaf litter or sediments. In addition, microbial biofilms represent an important food resource in freshwater ecosystems, yet their role in dietary contaminant exposure has been neglected for a long time, and the importance of biofilms in trophic transfer of contaminants is still understudied.

Proton Competition and Free Ion Activities Drive Cadmium, Copper, and Nickel Accumulation in River Biofilms in a Nordic Ecosystem

Biofilms can be used as a biomonitoring tool to determine metal bioavailability in streams affected by mining and other anthropogenic activities. Surface water and biofilm were sampled over two years from rivers located in the vicinity of a mine located in a Nordic ecosystem (Nunavik, Quebec). Biofilm metal content (Cd, Cu, and Ni) as well as a variety of physicochemical properties were determined to examine relationships between metal accumulation and water quality. Among the three metals of interest, copper and nickel had the highest levels of accumulation and cadmium had the lowest. When considering the exposure levels, nickel was the most abundant metal in our sampling sites. Both exposure and accumulation levels were consistent over time. Biofilm metal content was highly correlated to the ambient free metal ion concentration for sites of circumneutral pHs for all three metals. When the surface water pH was below 6, biofilm metal content was much lower than at other sites with similar aqueous metal concentrations of exposure. This apparent protective effect of decreasing pH can be explained by proton competition with dissolved metals for uptake binding sites at the surface of the organisms within the biofilm as described by the Biotic Ligand Model principles. The relationships obtained for Cd and Cu were overlapping those observed in previous publications, indicating strong similarities in metal accumulation processes in biofilms over very large geographical areas. Although more data are needed for Ni, our results show that biofilms represent a promising metal biomonitoring tool.

Influence of Temperature and Nickel on Algal Biofilm Fatty Acid Composition

Freshwater biofilms play an important role in aquatic ecosystems and are widely used to evaluate environmental conditions. Little is known about the effects of temperature and metals on biofilm fatty acid composition. In the present study, we exposed a natural biofilm cultured in mesocosms to a gradient of nickel (Ni) concentrations at 15 and 21 °C for 28 d. Metal bioaccumulation, algal taxonomic composition, and biofilm fatty acid profiles were determined. At both temperatures, bioaccumulated Ni increased with Ni exposure concentration and reached the highest values at 25 µM Ni, followed by a decrease at 55 and 105 µM Ni. In control biofilms, palmitic acid (16:0), palmitoleic acid (16:1n7), oleic acid (18:1n9), linoleic acid (18:2n6), and linolenic acid (18:3n3) were the dominant fatty acids at 15 and 21 °C. This composition suggests a dominance of cyanobacteria and green algae, which was subsequently confirmed by microscopic observations. The increase in temperature resulted in a decrease in the ratio of unsaturated to saturated fatty acids, which is considered to be an adaptive response to temperature variation. Polyunsaturated fatty acids (PUFAs) tended to decrease along the Ni gradient, as opposed to saturated fatty acids which increased with Ni concentrations. Temperature and Ni affected differently the estimated desaturase and elongase activities (product/precursor ratios). The increase in PUFAs at 15 °C was concomitant to an increase in Δ9-desaturase (D9D). The estimated activities of D9D, Δ12-desaturase, and Δ15-desaturase decreased along the Ni gradient and reflected a decline in PUFAs. The elevated estimated elongase activity reflected the observed increase in saturated fatty acids at the highest Ni exposure concentration (105 µM). Our results suggest that fatty acids could be used as an endpoint to evaluate environmental perturbations. Environ Toxicol Chem 2020;39:1566-1577. © 2020 SETAC.

Biofilms grown in aquatic microcosms affect mercury and selenium accumulation in Daphnia

Experiments examining mercury (Hg) toxicity in Daphnia are usually conducted in highly standardized conditions that prevent the formation of biofilm. Although such standardization has many advantages, extrapolation of results to natural conditions and inference of ecological effects is challenging. This is especially true since biofilms can accumulate metals/metalloids and play a key role in their transfer to higher trophic level organisms. In this study, we experimentally tested the effects of spontaneously appearing biofilm in Daphnia cultures on accumulation of Hg and its natural antagonist selenium (Se) in Daphnia magna. We added Hg (in the form of mercury (II) chloride) at two concentrations (0.2 µg/L and 2 µg/L) to experimental microcosms and measured the uptake of Hg and Se by D. magna in the presence and absence of biofilm. To test for consistent and replicable results, we ran two identical experimental sets one week apart. Biofilm presence significantly reduced the accumulation of Hg, while increasing the tissue Se content in D. magna, and these findings were reproducible across experimental sets. These findings indicate that highly standardized tests may not be adequate to predict the bioaccumulation and potential toxicity of metals/metalloids under natural conditions.

Diatom Deformities and Tolerance to Cadmium Contamination in Four Species

The relative tolerance of four diatoms (Nitzschia palea, Pinnularia mesolepta, Mayamaea atomus, and Gomphonema truncatum) to Cd was evaluated, including their proneness to deformities, and the severity of the abnormalities in relation to Cd concentration. The indirect effect of Cd on photosynthetic capacities was assessed during a short time exposure experiment using a dose-response approach to evaluate the relative tolerance of the four diatom species. The EC25 were 9 (3, 23), 606 (348, 926), 1179 (1015, 1349) and 2394 (1890, 2896) µg/L for P. mesolepta, G. truncatum, N. palea, and M. atomus respectively. P. mesolepta was by far the most Cd sensitive species while M. atomus was the most tolerant. In addition, diatoms were exposed to a single concentration of Cd comparable to a heavily contaminated environment for a longer duration to evaluate the effect of Cd on growth kinetics and the deformities induced. N. palea, P. mesolepta, and M. atomus were able to grow when cultivated with Cd while G. truncatum was not. Cadmium strongly affected the effective quantum yield in G. truncatum (4.8 ± 5.9% of the control) and P. mesolepta cultures (29.2 ± 6.9% of the control). The effects were moderate for N. palea (88.3 ± 0.7% of the control) and no impact was observed for M. atomus. The results from the two approaches were in accordance since they identified N. palea and M. atomus as the two most tolerant species to Cd, while P. mesolepta and G. truncatum were the most sensitive. The microscopy analyses revealed that P. mesolepta was more impacted by Cd than N. palea and M. atomus considering both the quantity of abnormal cells and the severity of the deformities. Overall, this research shows that not all deformities can be considered equal for a water quality bio-assessment. The work highlights a need to take into account metal-tolerance/sensitivity of the species and the severity of the deformities.

Effects of titanium dioxide nanoparticles on algal and bacterial communities in periphytic biofilms

The widespread application of commercial TiO₂ NPs inevitably leads to their release into environmental waters through various ways. TiO₂ NPs released into water might be absorbed by and react with periphytic biofilms, which are a kind of aquatic environmental media of important ecological significance, and influence the physiological activity and ecological function of periphytic biofilms. This study investigated the effects of exposure to 1 mg/L and 5 mg/L of TiO₂ NPs on periphytic biofilms cultured indoors. After a 10-day exposure to TiO₂ NPs, the growth (measured by chlorophyll-a content) of microalgal community was inhibited greatly (more than 60%); however, the primary production (indicated by quantum yield) of periphytic biofilms maintained changeless. As for bacteria, TiO₂ NP-exposure increased the bacterial diversity and altered the composition structure. Significant changes were observed in the bacterial communities at the class level, mainly including Alphaproteobacteria, Gammaproteobacteria, Cytophagia, Flavobacteriia, Sphingobacteriia, Synechococcophycideae and Oscillatoriophycideae. The enhancement of metabolic activities (the production of extracellular polymeric substances, especially proteins content increased by 48.51%) of periphytic biofilms was a resistance mechanism to toxicity of NPs. As for extracellular enzyme activities of periphytic biofilms, alkaline phosphatase activity was inhibited (22.43%) after exposed to 5 mg/L of TiO₂ NPs, which posed a threat to phosphorus metabolism of periphytic biofilms. Overall, this study demonstrated that 1 mg/L and 5 mg/L of TiO₂ NPs negatively influenced physiological activities and ecological functions of periphytic biofilms, highlighting that the ecological risks of TiO₂ NPs should be paid attention to.

Assessment of Diatom Assemblages in Close Proximity to Mining Activities in Nunavik, Northern Quebec (Canada)

Nunavik (Northern Quebec, Canada) is experiencing a mining boom. While several studies have been conducted in the region in relation to climate change, the effects of mining have received much less attention. In this study, we explored the use of biofilms in natural streams as an indicator of potential stress on living organisms caused by metal contamination from nickel mining activities. More specifically, we assessed diatom assemblages and the presence of teratologies (morphologic abnormalities) as a response to metals in streams located in close proximity to mining sites. Metal concentrations (as well as other cations), anions and pH values varied markedly among stations. Different diatom assemblage structures (four biotypes, i.e., groups of samples with similar diatom species composition) were observed depending on the level and the type of contamination. The frequency of diatom teratologies was higher in metal contaminated sites. The present study lays the foundation for bioassessment of metal contamination in low Arctic streams using diatom-based approaches, and will serve as a point in time reference for future evaluation of ecosystems degradation or recovery in Nunavik.

Morphological, physiological and molecular responses of Nitzschia palea under cadmium stress

The impact of cadmium on the diatom Nitzschia palea (Kützing) W. Smith 1856 was studied by examining the relation between valve deformities and response through biological processes and genetic expression. Cultures of N. palea were exposed to two Cd treatments (C₁ = 2.4 ± 0.6 and C₂ = 42.6 ± 4.2 µg Cd/L) along with a control (C₀ = 0 µg Cd/L) for 28 days. Cadmium bioaccumulation, diatoms growth, photosynthetic efficiencies, valve deformities and genetic expression were investigated during the course of the experiment. Cadmium exposure had significant effects on bioaccumulation, growth, valve deformities and genetic expression. Maximal effects for all studied endpoints were recorded after 7 days of exposure for the C₂ treatment, which corresponded to the sampling time and condition with maximum cadmium bioaccumulation. Abnormal raphe formations (deviation from its lateral position) were significantly more abundant in the C₂ treatment compared to the control. Molecular responses were related to cadmium level based on the number of genes impacted, intensity of the response and the frequency of observations. The expression of genes involved in the regulation of mitochondrial metabolism, photosynthesis, oxidative stress and silica metabolism was affected by cadmium exposure.

A freshwater diatom challenged by Zn: Biochemical, physiological and metabolomic responses of Tabellaria flocculosa(Roth) Kützing

Freshwater ecosystems are under threatening anthropogenic pressures worldwide, namely by metals. Diatoms are used as water quality indicators, but the influence of micronutrients such as Zn and its impacts are poorly understood. Thus, our study aimed to elucidate the tolerance level, the cellular targets and the responses to counteract Zn toxicity of freshwater diatoms by exposing Tabellaria flocculosa, isolated from a Zn contaminated stream. Biochemical, physiological and metabolomic approaches were used. It was demonstrated that Zn is toxic to T. flocculosa at concentrations occurring in contaminated environments. At low stress (30 μg Zn/L) few alterations in the metabolome were observed, but the enzymatic (SOD, CAT) and molecular (GSH, GSSG) antioxidant systems were induced, protecting cells from oxidative stress. At moderate stress (500 μg Zn/L) the main changes occurred in the metabolome (increases in fatty acids, amino acids, terpenoids, glycerol and phosphate, decreases in sucrose and lumichrome) with a moderate increase in cell damage (LPO and PC). The concerted action of all these mechanisms resulted in a non-significant decrease of growth, explaining the survival of this T. flocculosa strain in an environment with this Zn concentration. At the highest stress level (1000 μg Zn/L) the metabolome was identical to 500 μg Zn/L, and the induction of antioxidant systems and extracellular ion chelation (exopolysaccharides, frustulins) were the main responses to the increase of Zn toxicity. However, these mechanisms were unable to effectively abrogate cellular damage and growth reduction was observed. Moreover, the decrease in sucrose and especially in lumichrome should be tested as new specific markers of Zn toxicity. The information obtained in this study can assist in environmental risk assessment policies, support the prediction of diatom behaviour in highly impacted Zn environments, such as mining scenarios, and may help develop new indices, which include alterations induced by metals.

Assessing Cu impacts on freshwater diatoms: biochemical and metabolomic responses of Tabellaria flocculosa (Roth) Kützing

Metals are a recognised threat to aquatic organisms but the impact of metals such as copper (Cu) on benthic freshwater diatoms is poorly understood, even if diatoms are commonly used as water quality indicators. Our study aimed to elucidate the cellular targets of Cu toxicity and the mechanisms cells resort to counteract toxicity and to increase tolerance to Cu. A concerted approach analysing the biochemical, physiological and metabolome alterations in diatom cells was conducted by exposing the freshwater diatom Tabellaria flocculosa to 0, 0.3, 6 and 10μgCu/L. Cu was already toxic to T. flocculosa at concentrations common in environments and which are not usually considered to be contaminated (0.3μgCu/L). Under Cu impact, the metabolome of T. flocculosa changed significantly, especially at high concentrations (6 and 10μgCu/L). Cu toxicity was counteracted by increasing extracellular immobilization (EPS, frustulins), antioxidant (SOD, CAT) and detoxifying (GSTs) enzymes activity and low molecular weight antioxidants (GSH). These mechanisms were fuelled by higher energy production (increased ETS activity). At the highest Cu concentration (10μg/L), these processes were specially enhanced in an attempt to restrain the oxidative stress generated by high intracellular Cu concentrations. However, these mechanisms were not able to fully protect cells, and damage in membranes and proteins increased. Moreover, the decrease of hydroxylamine and unsaturated fatty acids and the increase of saturated fatty acids, 2-palmitoylglycerol, glycerol and diterpenoid compounds should be tested as new specific markers of Cu toxicity in future studies. This information can support the prediction of diatom behaviour in different Cu contamination levels, including highly impacted environments, such as mining scenarios, and may assist in environmental risk assessment policies and restoration programs.

Cu removal and response mechanisms of periphytic biofilms in a tubular bioreactor

This work studied Cu removal and response mechanisms of periphytic biofilms in a tubular bioreactor. Periphytic biofilms immobilized in a tubular bioreactor were used to remove Cu from wastewater with different Cu concentrations. Results showed that periphytic biofilms had a high removal efficiency (max. 99%) at a hydraulic retention time (HRT) of 12h under initial Cu concentrations of 2.0 and 10.0mgL^-1. Periphyton quickly adapted to Cu stress by regulating the community composition. Species richness, evenness and carbon metabolic diversity of the periphytic community increased when exposed to Cu. Diatoms, green algae, and bacteria (Gammaproteobacteria and Bacteroidia) were the dominant microorganisms and responsible for Cu removal. This study indicates that periphytic biofilms are promising in Cu removal from wastewater due to their strong adaptation capacity to Cu toxicity and also provides valuable information for understanding the relationships between microbial communities and heavy metal stress.

The use of diatoms in ecotoxicology and bioassessment: Insights, advances and challenges

Diatoms are regularly used for bioassessment and ecotoxicological studies in relation to environmental and anthropogenic disturbances. Traditional taxonomical diatom parameters (cell counts, biovolume estimates, species richness, diversity indices and metrics using sensitive and tolerant diatom species) are regularly used for these studies. In the same context, very less focus was given on new endpoints of diatoms (life-forms, nuclear anomalies, alteration in photosynthetic apparatus shape, motility, lipid bodies, size reduction and deformities), in spite of their numerous merits, such as, their easiness, quickness, cheapness, global acceptation and no especial training in diatom taxonomy. In this review we analyzed 202 articles (from lab and field studies), with the aim to investigate the bioassessment and ecotoxicological advancement taken place in diatom research especially in terms of exploring new endpoints along with the traditional taxonomical parameters in a perspective which can greatly enhance the evaluation of fluvial ecosystem quality for biomonitoring practices.