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Zettlemoyer MA, Conner RJ, Seaver MM, Waddle E, DeMarche ML. A Long-Lived Alpine Perennial Advances Flowering under Warmer Conditions but Not Enough to Maintain Reproductive Success. Am Nat 2024; 203:E157-E174. [PMID: 38635358 DOI: 10.1086/729438] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/20/2024]
Abstract
AbstractAssessing whether phenological shifts in response to climate change confer a fitness advantage requires investigating the relationships among phenology, fitness, and environmental drivers of selection. Despite widely documented advancements in phenology with warming climate, we lack empirical estimates of how selection on phenology varies in response to continuous climate drivers or how phenological shifts in response to warming conditions affect fitness. We leverage an unusual long-term dataset with repeated, individual measurements of phenology and reproduction in a long-lived alpine plant. We analyze phenotypic plasticity in flowering phenology in relation to two climate drivers, snowmelt timing and growing degree days (GDDs). Plants flower earlier with increased GDDs and earlier snowmelt, and directional selection also favors earlier flowering under these conditions. However, reproduction still declines with warming and early snowmelt, even when flowering is early. Furthermore, the steepness of this reproductive decline increases dramatically with warming conditions, resulting in very little fruit production regardless of flowering time once GDDs exceed approximately 225 degree days or snowmelt occurs before May 15. Even though advancing phenology confers a fitness advantage relative to stasis, these shifts are insufficient to maintain reproduction under warming, highlighting limits to the potential benefits of phenological plasticity under climate change.
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2
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Zeng ZA, Wolkovich EM. Weak evidence of provenance effects in spring phenology across Europe and North America. THE NEW PHYTOLOGIST 2024. [PMID: 38494441 DOI: 10.1111/nph.19674] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/26/2023] [Accepted: 02/27/2024] [Indexed: 03/19/2024]
Abstract
Forecasting the biological impacts of climate change requires understanding how species respond to warmer temperatures through interannual flexible variation vs through adaptation to local conditions. Yet, we often lack this information entirely or find conflicting evidence across studies, which is the case for spring phenology. We synthesized common garden studies across Europe and North America that reported spring event dates for a mix of angiosperm and gymnosperm tree species in the northern hemisphere, capturing data from 384 North American and 101 European provenances (i.e. populations) with observations from 1962 to 2019, alongside autumn event data when provided. Across continents, we found no evidence of provenance effects in spring phenology, but strong clines with latitude and mean annual temperature in autumn. These effects, however, appeared to diverge by continent and species type (gymnosperm vs angiosperm), with particularly pronounced clines in North America in autumn events. Our results suggest flexible, likely plastic responses, in spring phenology with warming, and potential limits - at least in the short term - due to provenance effects for autumn phenology. They also highlight that, after over 250 yr of common garden studies on tree phenology, we still lack a holistic predictive model of clines across species and phenological events.
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Affiliation(s)
- Ziyun Alina Zeng
- Forest Resources Management, Faculty of Forestry, University of British Columbia, 2424 Main Mall, Vancouver, BC, V6T 1Z4, Canada
| | - Elizabeth M Wolkovich
- Forest & Conservation Sciences, Faculty of Forestry, University of British Columbia, 2424 Main Mall, Vancouver, BC, V6T 1Z4, Canada
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3
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Zettlemoyer MA. A continuum of selection on life-history traits under differential environmental heterogeneity. A commentary on 'Chasing the fitness optimum: temporal variation in genetic and environmental expression of life-history traits for a perennial plant'. ANNALS OF BOTANY 2023; 132:i-ii. [PMID: 38006328 PMCID: PMC10902886 DOI: 10.1093/aob/mcad176] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/27/2023]
Abstract
This article comments on:
Mason W. Kulbaba, Zebadiah Yoko and Jill A. Hamilton. Chasing the fitness optimum: temporal variation in the genetic and environmental expression of life-history traits for a perennial plant, Annals of Botany, Volume 132, Issue 7, 1 December 2023, Pages 1191–1204 https://doi.org/10.1093/aob/mcad100
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4
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Westergren M, Archambeau J, Bajc M, Damjanić R, Theraroz A, Kraigher H, Oddou-Muratorio S, González-Martínez SC. Low but significant evolutionary potential for growth, phenology and reproduction traits in European beech. Mol Ecol 2023. [PMID: 37962106 DOI: 10.1111/mec.17196] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/16/2023] [Revised: 08/23/2023] [Accepted: 10/23/2023] [Indexed: 11/15/2023]
Abstract
Local survival of forest tree populations under climate change depends on existing genetic variation and their adaptability to changing environments. Responses to selection were studied in European beech (Fagus sylvatica) under field conditions. A total of 1087 adult trees, seeds, 1-year-old seedlings and established multiyear saplings were genotyped with 16 nuSSRs. Adult trees were assessed for phenotypic traits related to growth, phenology and reproduction. Parentage and paternity analyses were used to estimate effective female and male fecundity as a proxy of fitness and showed that few parents contributed to successful regeneration. Selection gradients were estimated from the relationship between traits and fecundity, while heritability and evolvability were estimated using mixed models and the breeder's equation. Larger trees bearing more fruit and early male flowering had higher total fecundity, while trees with longer growth season had lower total fecundity (directional selection). Stabilizing selection on spring phenology was found for female fecundity, highlighting the role of late frosts as a selection driver. Selection gradients for other traits varied between measurement years and the offspring cohort used to estimate parental fecundity. Compared to other studies in natural populations, we found low to moderate heritability and evolvability for most traits. Response to selection was higher for growth than for budburst, leaf senescence or reproduction traits, reflecting more consistent selection gradients across years and sex functions, and higher phenotypic variability in the population. Our study provides empirical evidence suggesting that populations of long-lived organisms such as forest trees can adapt locally, even at short-time scales.
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Affiliation(s)
| | | | - Marko Bajc
- Slovenian Forestry Institute, Ljubljana, Slovenia
| | - Rok Damjanić
- Slovenian Forestry Institute, Ljubljana, Slovenia
| | | | | | - Sylvie Oddou-Muratorio
- INRAE, URFM, Avignon, France
- INRAE, Univ. de Pau et des Pays de l'Adour, E2S UPPA, ECOBIOP, Saint-Pée-sur-Nivelle, France
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5
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Manitašević Jovanović S, Hočevar K, Vuleta A, Tucić B. Predicting the Responses of Functional Leaf Traits to Global Warming: An In Situ Temperature Manipulation Design Using Iris pumila L. PLANTS (BASEL, SWITZERLAND) 2023; 12:3114. [PMID: 37687360 PMCID: PMC10490406 DOI: 10.3390/plants12173114] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/17/2023] [Revised: 08/23/2023] [Accepted: 08/24/2023] [Indexed: 09/10/2023]
Abstract
Phenotypic plasticity is widely acknowledged as one of the most common solutions for coping with novel environmental conditions following climate change. However, it is less known whether the current amounts of trait plasticity, which is sufficient for matching with the contemporary climate, will be adequate when global temperatures exceed historical levels. We addressed this issue by exploring the responses of functional and structural leaf traits in Iris pumila clonal individuals to experimentally increased temperatures (~1.5 °C) using an open top chamber (OTC) design. We determined the phenotypic values of the specific leaf area, leaf dry matter content, specific leaf water content, and leaf thickness in the leaves sampled from the same clone inside and outside of the OTC deployed on it, over seasons and years within two natural populations. We analyzed the data using a repeated multivariate analysis of variance, which primarily focusses on the profiles (reaction norms (RNs)) of a variable gathered from the same individual at several different time points. We found that the mean RNs of all analyzed traits were parallel regardless of experienced temperatures, but differed in the level and the shape. The populations RNs were similar as well. As the amount of plasticity in the analyzed leaf trait was adequate for coping with elevated temperatures inside the OTCs, we predict that it will be also sufficient for responding to increased temperatures if they exceed the 1.5 °C target.
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Affiliation(s)
- Sanja Manitašević Jovanović
- Department of Evolutionary Biology, Institute for Biological Research “Siniša Stanković”—National Institute of the Republic of Serbia, University of Belgrade, 11108 Belgrade, Serbia; (K.H.); (A.V.)
| | - Katarina Hočevar
- Department of Evolutionary Biology, Institute for Biological Research “Siniša Stanković”—National Institute of the Republic of Serbia, University of Belgrade, 11108 Belgrade, Serbia; (K.H.); (A.V.)
| | - Ana Vuleta
- Department of Evolutionary Biology, Institute for Biological Research “Siniša Stanković”—National Institute of the Republic of Serbia, University of Belgrade, 11108 Belgrade, Serbia; (K.H.); (A.V.)
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Soularue JP, Firmat C, Caignard T, Thöni A, Arnoux L, Delzon S, Ronce O, Kremer A. Antagonistic Effects of Assortative Mating on the Evolution of Phenotypic Plasticity along Environmental Gradients. Am Nat 2023; 202:18-39. [PMID: 37384769 PMCID: PMC7614710 DOI: 10.1086/724579] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2023]
Abstract
AbstractPrevious theory has shown that assortative mating for plastic traits can maintain genetic divergence across environmental gradients despite high gene flow. Yet these models did not examine how assortative mating affects the evolution of plasticity. We here describe patterns of genetic variation across elevation for plasticity in a trait under assortative mating, using multiple-year observations of budburst date in a common garden of sessile oaks. Despite high gene flow, we found significant spatial genetic divergence for the intercept, but not for the slope, of reaction norms to temperature. We then used individual-based simulations, where both the slope and the intercept of the reaction norm evolve, to examine how assortative mating affects the evolution of plasticity, varying the intensity and distance of gene flow. Our model predicts the evolution of either suboptimal plasticity (reaction norms with a slope shallower than optimal) or hyperplasticity (slopes steeper than optimal) in the presence of assortative mating when optimal plasticity would evolve under random mating. Furthermore, a cogradient pattern of genetic divergence for the intercept of the reaction norm (where plastic and genetic effects are in the same direction) always evolves in simulations with assortative mating, consistent with our observations in the studied oak populations.
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7
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Archambeau J, Benito Garzón M, de Miguel M, Brachi B, Barraquand F, González-Martínez SC. Reduced within-population quantitative genetic variation is associated with climate harshness in maritime pine. Heredity (Edinb) 2023; 131:68-78. [PMID: 37221230 PMCID: PMC10313832 DOI: 10.1038/s41437-023-00622-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/10/2021] [Revised: 05/01/2023] [Accepted: 05/02/2023] [Indexed: 05/25/2023] Open
Abstract
How evolutionary forces interact to maintain genetic variation within populations has been a matter of extensive theoretical debates. While mutation and exogenous gene flow increase genetic variation, stabilizing selection and genetic drift are expected to deplete it. To date, levels of genetic variation observed in natural populations are hard to predict without accounting for other processes, such as balancing selection in heterogeneous environments. We aimed to empirically test three hypotheses: (i) admixed populations have higher quantitative genetic variation due to introgression from other gene pools, (ii) quantitative genetic variation is lower in populations from harsher environments (i.e., experiencing stronger selection), and (iii) quantitative genetic variation is higher in populations from heterogeneous environments. Using growth, phenological and functional trait data from three clonal common gardens and 33 populations (522 clones) of maritime pine (Pinus pinaster Aiton), we estimated the association between the population-specific total genetic variances (i.e., among-clone variances) for these traits and ten population-specific indices related to admixture levels (estimated based on 5165 SNPs), environmental temporal and spatial heterogeneity and climate harshness. Populations experiencing colder winters showed consistently lower genetic variation for early height growth (a fitness-related trait in forest trees) in the three common gardens. Within-population quantitative genetic variation was not associated with environmental heterogeneity or population admixture for any trait. Our results provide empirical support for the potential role of natural selection in reducing genetic variation for early height growth within populations, which indirectly gives insight into the adaptive potential of populations to changing environments.
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Affiliation(s)
- Juliette Archambeau
- INRAE, Univ. Bordeaux, BIOGECO, F-33610, Cestas, France.
- UK Centre for Ecology & Hydrology, Bush Estate, Penicuik, UK.
| | | | - Marina de Miguel
- INRAE, Univ. Bordeaux, BIOGECO, F-33610, Cestas, France
- EGFV, Univ. Bordeaux, Bordeaux Sciences Agro, INRAE, ISVV, F-33882, Villenave d'Ornon, France
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8
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Garnier J, Cotto O, Bouin E, Bourgeron T, Lepoutre T, Ronce O, Calvez V. Adaptation of a quantitative trait to a changing environment: New analytical insights on the asexual and infinitesimal sexual models. Theor Popul Biol 2023; 152:1-22. [PMID: 37172789 DOI: 10.1016/j.tpb.2023.04.002] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2022] [Revised: 04/19/2023] [Accepted: 04/20/2023] [Indexed: 05/15/2023]
Abstract
Predicting the adaptation of populations to a changing environment is crucial to assess the impact of human activities on biodiversity. Many theoretical studies have tackled this issue by modeling the evolution of quantitative traits subject to stabilizing selection around an optimal phenotype, whose value is shifted continuously through time. In this context, the population fate results from the equilibrium distribution of the trait, relative to the moving optimum. Such a distribution may vary with the shape of selection, the system of reproduction, the number of loci, the mutation kernel or their interactions. Here, we develop a methodology that provides quantitative measures of population maladaptation and potential of survival directly from the entire profile of the phenotypic distribution, without any a priori on its shape. We investigate two different systems of reproduction (asexual and infinitesimal sexual models of inheritance), with various forms of selection. In particular, we recover that fitness functions such that selection weakens away from the optimum lead to evolutionary tipping points, with an abrupt collapse of the population when the speed of environmental change is too high. Our unified framework allows deciphering the mechanisms that lead to this phenomenon. More generally, it allows discussing similarities and discrepancies between the two systems of reproduction, which are ultimately explained by different constraints on the evolution of the phenotypic variance. We demonstrate that the mean fitness in the population crucially depends on the shape of the selection function in the infinitesimal sexual model, in contrast with the asexual model. In the asexual model, we also investigate the effect of the mutation kernel and we show that kernels with higher kurtosis tend to reduce maladaptation and improve fitness, especially in fast changing environments.
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Affiliation(s)
- J Garnier
- LAMA, UMR 5127, CNRS, Univ. Grenoble Alpes, Univ. Savoie Mont Blanc, Chambery, France.
| | - O Cotto
- PHIM Plant Health Institute, INRAE, Univ Montpellier, CIRAD, Institut Agro, IRD, Montpellier, France
| | - E Bouin
- CEREMADE, UMR 7534, CNRS, Univ. Paris Dauphine, Paris, France
| | | | - T Lepoutre
- ICJ, UMR 5208, CNRS, Univ. Claude Bernard Lyon 1, Lyon, France; Equipe-projet Inria Dracula, Lyon, France
| | - O Ronce
- ISEM, Univ Montpellier, CNRS, IRD, Montpellier, France; CNRS, Biodiversity Research Center, Univ. British Columbia, Vancouver, British Columbia, Canada
| | - V Calvez
- ICJ, UMR 5208, CNRS, Univ. Claude Bernard Lyon 1, Lyon, France; Equipe-projet Inria Dracula, Lyon, France
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9
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Makarieva AM, Nefiodov AV, Nobre AD, Baudena M, Bardi U, Sheil D, Saleska SR, Molina RD, Rammig A. The role of ecosystem transpiration in creating alternate moisture regimes by influencing atmospheric moisture convergence. GLOBAL CHANGE BIOLOGY 2023; 29:2536-2556. [PMID: 36802091 DOI: 10.1111/gcb.16644] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/28/2022] [Revised: 02/07/2023] [Accepted: 02/10/2023] [Indexed: 05/31/2023]
Abstract
The terrestrial water cycle links the soil and atmosphere moisture reservoirs through four fluxes: precipitation, evaporation, runoff, and atmospheric moisture convergence (net import of water vapor to balance runoff). Each of these processes is essential for sustaining human and ecosystem well-being. Predicting how the water cycle responds to changes in vegetation cover remains a challenge. Recently, changes in plant transpiration across the Amazon basin were shown to be associated disproportionately with changes in rainfall, suggesting that even small declines in transpiration (e.g., from deforestation) would lead to much larger declines in rainfall. Here, constraining these findings by the law of mass conservation, we show that in a sufficiently wet atmosphere, forest transpiration can control atmospheric moisture convergence such that increased transpiration enhances atmospheric moisture import and results in water yield. Conversely, in a sufficiently dry atmosphere increased transpiration reduces atmospheric moisture convergence and water yield. This previously unrecognized dichotomy can explain the otherwise mixed observations of how water yield responds to re-greening, as we illustrate with examples from China's Loess Plateau. Our analysis indicates that any additional precipitation recycling due to additional vegetation increases precipitation but decreases local water yield and steady-state runoff. Therefore, in the drier regions/periods and early stages of ecological restoration, the role of vegetation can be confined to precipitation recycling, while once a wetter stage is achieved, additional vegetation enhances atmospheric moisture convergence and water yield. Recent analyses indicate that the latter regime dominates the global response of the terrestrial water cycle to re-greening. Evaluating the transition between regimes, and recognizing the potential of vegetation for enhancing moisture convergence, are crucial for characterizing the consequences of deforestation as well as for motivating and guiding ecological restoration.
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Affiliation(s)
- Anastassia M Makarieva
- Institute for Advanced Study, Technical University of Munich, Garching, Germany
- Theoretical Physics Division, Petersburg Nuclear Physics Institute, St. Petersburg, Russia
| | - Andrei V Nefiodov
- Theoretical Physics Division, Petersburg Nuclear Physics Institute, St. Petersburg, Russia
| | | | - Mara Baudena
- National Research Council of Italy, Institute of Atmospheric Sciences and Climate (CNR-ISAC), Torino, Italy
| | - Ugo Bardi
- Department of Chemistry, University of Florence, Firenze, Italy
| | - Douglas Sheil
- Forest Ecology and Forest Management Group, Wageningen University & Research, Wageningen, The Netherlands
- Center for International Forestry Research (CIFOR), Kota Bogor, Indonesia
- Faculty of Environmental Sciences and Natural Resource Management, Norwegian University of Life Sciences, Ås, Norway
| | - Scott R Saleska
- Department of Ecology and Evolutionary Biology, University of Arizona, Tucson, Arizona, USA
| | - Ruben D Molina
- Escuela Ambiental, Facultad de Ingeniería, Universidad de Antioquia, Medellín, Colombia
| | - Anja Rammig
- Technical University of Munich, School of Life Sciences, Freising, Germany
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10
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May SA, Hard JJ, Ford MJ, Naish KA, Ward EJ. Assortative mating for reproductive timing affects population recruitment and resilience in a quantitative genetic model. Evol Appl 2023; 16:657-672. [PMID: 36969143 PMCID: PMC10033844 DOI: 10.1111/eva.13524] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/10/2022] [Accepted: 12/12/2022] [Indexed: 01/22/2023] Open
Abstract
Quantitative models that simulate the inheritance and evolution of fitness-linked traits offer a method for predicting how environmental or anthropogenic perturbations can affect the dynamics of wild populations. Random mating between individuals within populations is a key assumption of many such models used in conservation and management to predict the impacts of proposed management or conservation actions. However, recent evidence suggests that non-random mating may be underestimated in wild populations and play an important role in diversity-stability relationships. Here we introduce a novel individual-based quantitative genetic model that incorporates assortative mating for reproductive timing, a defining attribute of many aggregate breeding species. We demonstrate the utility of this framework by simulating a generalized salmonid lifecycle, varying input parameters, and comparing model outputs to theoretical expectations for several eco-evolutionary, population dynamic scenarios. Simulations with assortative mating systems resulted in more resilient and productive populations than those that were randomly mating. In accordance with established ecological and evolutionary theory, we also found that decreasing the magnitude of trait correlations, environmental variability, and strength of selection each had a positive effect on population growth. Our model is constructed in a modular framework so that future components can be easily added to address pressing issues such as the effects of supportive breeding, variable age structure, differential selection by sex or age, and fishery interactions on population growth and resilience. With code published in a public Github repository, model outputs may easily be tailored to specific study systems by parameterizing with empirically generated values from long-term ecological monitoring programs.
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Affiliation(s)
- Samuel A. May
- School of Aquatic and Fishery Sciences University of Washington Seattle Washington USA
| | - Jeffrey J. Hard
- NOAA Fisheries Northwest Fisheries Science Center Seattle Washington USA
| | - Michael J. Ford
- NOAA Fisheries Northwest Fisheries Science Center Seattle Washington USA
| | - Kerry A. Naish
- School of Aquatic and Fishery Sciences University of Washington Seattle Washington USA
| | - Eric J. Ward
- NOAA Fisheries Northwest Fisheries Science Center Seattle Washington USA
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11
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Vargas G. G, Kunert N, Hammond WM, Berry ZC, Werden LK, Smith‐Martin CM, Wolfe BT, Toro L, Mondragón‐Botero A, Pinto‐Ledezma JN, Schwartz NB, Uriarte M, Sack L, Anderson‐Teixeira KJ, Powers JS. Leaf habit affects the distribution of drought sensitivity but not water transport efficiency in the tropics. Ecol Lett 2022; 25:2637-2650. [PMID: 36257904 PMCID: PMC9828425 DOI: 10.1111/ele.14128] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/18/2022] [Revised: 08/11/2022] [Accepted: 09/10/2022] [Indexed: 01/12/2023]
Abstract
Considering the global intensification of aridity in tropical biomes due to climate change, we need to understand what shapes the distribution of drought sensitivity in tropical plants. We conducted a pantropical data synthesis representing 1117 species to test whether xylem-specific hydraulic conductivity (KS ), water potential at leaf turgor loss (ΨTLP ) and water potential at 50% loss of KS (ΨP50 ) varied along climate gradients. The ΨTLP and ΨP50 increased with climatic moisture only for evergreen species, but KS did not. Species with high ΨTLP and ΨP50 values were associated with both dry and wet environments. However, drought-deciduous species showed high ΨTLP and ΨP50 values regardless of water availability, whereas evergreen species only in wet environments. All three traits showed a weak phylogenetic signal and a short half-life. These results suggest strong environmental controls on trait variance, which in turn is modulated by leaf habit along climatic moisture gradients in the tropics.
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Affiliation(s)
- German Vargas G.
- Department of Plant and Microbial BiologyUniversity of MinnesotaSt. PaulMinnesotaUSA,School of Biological SciencesThe University of UtahSalt Lake CityUtahUSA
| | - Norbert Kunert
- Conservation Ecology CenterSmithsonian National Zoo and Conservation Biology InstituteFront RoyalVirginiaUSA,Forest Global Earth ObservatorySmithsonian Tropical Research InstitutePanamaRepublic of Panama,Department of Integrative Biology and Biodiversity Research, Institute of BotanyUniversity of Natural Resources and Life Sciences ViennaViennaAustria
| | - William M. Hammond
- Agronomy Department, Institute of Food and Agricultural SciencesUniversity of FloridaGainesvilleFloridaUSA
| | - Z. Carter Berry
- Department of BiologyWake Forest UniversityWinston‐SalemNorth CarolinaUSA
| | - Leland K. Werden
- Department of Environmental Systems ScienceETH ZürichZürichSwitzerland
| | - Chris M. Smith‐Martin
- Department of Ecology Evolution and Environmental BiologyColumbia UniversityNew YorkNew YorkUSA
| | - Brett T. Wolfe
- School of Renewable Natural ResourcesLouisiana State University Agricultural CenterBaton RougeLouisianaUSA,Smithsonian Tropical Research InstitutePanamaRepublic of Panama
| | - Laura Toro
- Department of Plant and Microbial BiologyUniversity of MinnesotaSt. PaulMinnesotaUSA
| | | | - Jesús N. Pinto‐Ledezma
- Department of Ecology, Evolution and BehaviorUniversity of MinnesotaSt. PaulMinnesotaUSA
| | - Naomi B. Schwartz
- Department of GeographyUniversity of British ColumbiaVancouverBritish ColumbiaCanada
| | - María Uriarte
- Department of Ecology Evolution and Environmental BiologyColumbia UniversityNew YorkNew YorkUSA
| | - Lawren Sack
- Department of Ecology and EvolutionUniversity of California Los AngelesLos AngelesCaliforniaUSA
| | - Kristina J. Anderson‐Teixeira
- Conservation Ecology CenterSmithsonian National Zoo and Conservation Biology InstituteFront RoyalVirginiaUSA,Forest Global Earth ObservatorySmithsonian Tropical Research InstitutePanamaRepublic of Panama
| | - Jennifer S. Powers
- Department of Ecology, Evolution and BehaviorUniversity of MinnesotaSt. PaulMinnesotaUSA
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Ćalić I, Groen SC, Choi JY, Joly‐Lopez Z, Hamann E, Natividad MA, Dorph K, Cabral CLU, Torres RO, Vergara GV, Henry A, Purugganan MD, Franks SJ. The influence of genetic architecture on responses to selection under drought in rice. Evol Appl 2022; 15:1670-1690. [PMID: 36330294 PMCID: PMC9624088 DOI: 10.1111/eva.13419] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2021] [Revised: 04/11/2022] [Accepted: 04/11/2022] [Indexed: 11/29/2022] Open
Abstract
Accurately predicting responses to selection is a major goal in biology and important for successful crop breeding in changing environments. However, evolutionary responses to selection can be constrained by such factors as genetic and cross‐environment correlations, linkage, and pleiotropy, and our understanding of the extent and impact of such constraints is still developing. Here, we conducted a field experiment to investigate potential constraints to selection for drought resistance in rice (Oryza sativa) using phenotypic selection analysis and quantitative genetics. We found that traits related to drought response were heritable, and some were under selection, including selection for earlier flowering, which could allow drought escape. However, patterns of selection generally were not opposite under wet and dry conditions, and we did not find individual or closely linked genes that influenced multiple traits, indicating a lack of evidence that antagonistic pleiotropy, linkage, or cross‐environment correlations would constrain selection for drought resistance. In most cases, genetic correlations had little influence on responses to selection, with direct and indirect selection largely congruent. The exception to this was seed mass under drought, which was predicted to evolve in the opposite direction of direct selection due to correlations. Because of this indirect effect on selection on seed mass, selection for drought resistance was not accompanied by a decrease in seed mass, and yield increased with fecundity. Furthermore, breeding lines with high fitness and yield under drought also had high fitness and yield under wet conditions, indicating that there was no evidence for a yield penalty on drought resistance. We found multiple genes in which expression influenced both water use efficiency (WUE) and days to first flowering, supporting a genetic basis for the trade‐off between drought escape and avoidance strategies. Together, these results can provide helpful guidance for understanding and managing evolutionary constraints and breeding stress‐resistant crops.
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Affiliation(s)
- Irina Ćalić
- Department of Biological Sciences Fordham University Bronx NY USA
- Institute of Botany University of Cologne Cologne Germany
| | - Simon C. Groen
- Department of Nematology University of California at Riverside Riverside CA USA
- Center for Genomics and Systems Biology, Department of Biology New York University New York NY USA
| | - Jae Young Choi
- Center for Genomics and Systems Biology, Department of Biology New York University New York NY USA
| | - Zoé Joly‐Lopez
- Center for Genomics and Systems Biology, Department of Biology New York University New York NY USA
- Département de Chimie Université du Québec à Montréal Montréal Québec Canada
| | - Elena Hamann
- Department of Biological Sciences Fordham University Bronx NY USA
- Department of Genetics and Odum School of Ecology University of Georgia Athens GA USA
| | | | - Katherine Dorph
- Center for Genomics and Systems Biology, Department of Biology New York University New York NY USA
| | | | | | - Georgina V. Vergara
- International Rice Research Institute Los Baños Laguna Philippines
- Institute of Crop Science, University of the Philippines Los Baños, 4031 College Laguna Philippines
| | - Amelia Henry
- International Rice Research Institute Los Baños Laguna Philippines
| | - Michael D. Purugganan
- Center for Genomics and Systems Biology, Department of Biology New York University New York NY USA
- Center for Genomics and Systems Biology NYU Abu Dhabi Research Institute New York University Abu Dhabi, Saadiyat Island Abu Dhabi United Arab Emirates
| | - Steven J. Franks
- Department of Biological Sciences Fordham University Bronx NY USA
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13
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Clo J. The evolution of the additive variance of a trait under stabilizing selection after autopolyploidization. J Evol Biol 2022; 35:891-897. [PMID: 35506572 PMCID: PMC9322463 DOI: 10.1111/jeb.14010] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2022] [Revised: 03/21/2022] [Accepted: 04/10/2022] [Indexed: 12/22/2022]
Abstract
Whole‐genome duplication is a common mutation in eukaryotes with far‐reaching phenotypic effects. The resulting morphological, physiological and fitness consequences and how they affect the survival probability of polyploid lineages are intensively studied, but little is known about the effect of genome doubling on the evolutionary potential of populations. Historically, it has been argued polyploids should be less able to adapt because gene duplication dilutes the effects of alleles, such that polyploids are less likely to evolve new adaptive gene complexes compared with diploids. In this paper, I investigate the short‐ and long‐term consequences of genome doubling on the additive genetic variance of populations. To do so, I extended the classical models of quantitative traits under stabilizing selection to study the evolution of the additive variance of the trait under study after a shift from diploidy to tetraploidy. I found that, for realistic allele‐dosage effects, polyploidization is associated with an initial decrease in adaptive potential. In the long term, the better masking of recessive deleterious mutations associated with polyploidy compensates for the initial decrease in additive variance. The time for the tetraploid populations to reach or exceed the additive variance of their diploid progenitors is generally lower than 200 generations. These results highlight that polyploidization per se has a negligible negative effect on the adaptive potential of populations in the short term, and a substantial positive effect in the long term.
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Affiliation(s)
- Josselin Clo
- Department of Botany, Charles University, Prague, Czech Republic
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14
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Aurelle D, Thomas S, Albert C, Bally M, Bondeau A, Boudouresque C, Cahill AE, Carlotti F, Chenuil A, Cramer W, Davi H, De Jode A, Ereskovsky A, Farnet A, Fernandez C, Gauquelin T, Mirleau P, Monnet A, Prévosto B, Rossi V, Sartoretto S, Van Wambeke F, Fady B. Biodiversity, climate change, and adaptation in the Mediterranean. Ecosphere 2022. [DOI: 10.1002/ecs2.3915] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022] Open
Affiliation(s)
- Didier Aurelle
- Aix Marseille Univ, Université de Toulon, CNRS, IRD, MIO Marseille France
- Aix Marseille Univ, Avignon Université, CNRS, IRD, IMBE Marseille France
- Institut de Systématique, Evolution, Biodiversité (ISYEB), Muséum National d'Histoire Naturelle, CNRS Sorbonne Université, EPHE Paris France
| | - Séverine Thomas
- Aix Marseille Université, Labex‐OT‐Med Aix‐en‐Provence France
| | - Cécile Albert
- Aix Marseille Univ, Avignon Université, CNRS, IRD, IMBE Marseille France
| | - Marc Bally
- Aix Marseille Univ, Université de Toulon, CNRS, IRD, MIO Marseille France
| | - Alberte Bondeau
- Aix Marseille Univ, Avignon Université, CNRS, IRD, IMBE Marseille France
| | | | | | - François Carlotti
- Aix Marseille Univ, Université de Toulon, CNRS, IRD, MIO Marseille France
| | - Anne Chenuil
- Aix Marseille Univ, Avignon Université, CNRS, IRD, IMBE Marseille France
| | - Wolfgang Cramer
- Aix Marseille Univ, Avignon Université, CNRS, IRD, IMBE Marseille France
| | - Hendrik Davi
- INRAE, Ecologie des Forêts Méditerranéennes (URFM) Avignon France
| | - Aurélien De Jode
- Aix Marseille Univ, Avignon Université, CNRS, IRD, IMBE Marseille France
- Department of Marine Sciences‐Tjärnö University of Gothenburg, Tjärnö Marine Laboratory Gothenburg Sweden
| | - Alexander Ereskovsky
- Aix Marseille Univ, Avignon Université, CNRS, IRD, IMBE Marseille France
- Saint‐Petersburg State University St. Petersburg Russia
| | - Anne‐Marie Farnet
- Aix Marseille Univ, Avignon Université, CNRS, IRD, IMBE Marseille France
| | | | - Thierry Gauquelin
- Aix Marseille Univ, Avignon Université, CNRS, IRD, IMBE Marseille France
| | - Pascal Mirleau
- Aix Marseille Univ, Avignon Université, CNRS, IRD, IMBE Marseille France
| | | | | | - Vincent Rossi
- Aix Marseille Univ, Université de Toulon, CNRS, IRD, MIO Marseille France
| | | | - France Van Wambeke
- Aix Marseille Univ, Université de Toulon, CNRS, IRD, MIO Marseille France
| | - Bruno Fady
- INRAE, Ecologie des Forêts Méditerranéennes (URFM) Avignon France
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15
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Goldberg EE, Price T. Effects of plasticity on elevational range size and species richness. Am Nat 2022; 200:316-329. [DOI: 10.1086/720412] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
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16
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Stuber EF, Carlson BS, Jesmer BR. Spatial personalities: a meta-analysis of consistent individual differences in spatial behavior. Behav Ecol 2022. [DOI: 10.1093/beheco/arab147] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
Abstract
Individual variation in behavior, particularly consistent among-individual differences (i.e., personality), has important ecological and evolutionary implications for population and community dynamics, trait divergence, and patterns of speciation. Nevertheless, individual variation in spatial behaviors, such as home range behavior, movement characteristics, or habitat use has yet to be incorporated into the concepts or methodologies of ecology and evolutionary biology. To evaluate evidence for the existence of consistent among-individual differences in spatial behavior – which we refer to as “spatial personality” – we performed a meta-analysis of 200 repeatability estimates of home range size, movement metrics, and habitat use. We found that the existence of spatial personality is a general phenomenon, with consistently high repeatability (r) across classes of spatial behavior (r = 0.67–0.82), taxa (r = 0.31–0.79), and time between repeated measurements (r = 0.54–0.74). These results suggest: 1) repeatable spatial behavior may either be a cause or consequence of the environment experienced and lead to spatial personalities that may limit the ability of individuals to behaviorally adapt to changing landscapes; 2) interactions between spatial phenotypes and environmental conditions could result in differential reproduction, survival, and dispersal, suggesting that among-individual variation may facilitate population-level adaptation; 3) spatial patterns of species' distributions and spatial population dynamics may be better understood by shifting from a mean field analytical approach towards methods that account for spatial personalities and their associated fitness and ecological dynamics.
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Affiliation(s)
- Erica F Stuber
- U.S. Geological Survey Utah Cooperative Fish and Wildlife Research Unit, Department of Wildland Resources, 5230 Old Main Hill, Utah State University, Logan, Utah, USA
- Center for Biodiversity and Global Change, Yale University, 165 Prospect St., New Haven, CT, USA
- Department of Ecology and Evolutionary Biology, Yale University, 165 Prospect St., New Haven, CT, USA
| | - Ben S Carlson
- Center for Biodiversity and Global Change, Yale University, 165 Prospect St., New Haven, CT, USA
- Department of Ecology and Evolutionary Biology, Yale University, 165 Prospect St., New Haven, CT, USA
| | - Brett R Jesmer
- Center for Biodiversity and Global Change, Yale University, 165 Prospect St., New Haven, CT, USA
- Department of Ecology and Evolutionary Biology, Yale University, 165 Prospect St., New Haven, CT, USA
- Department of Fish and Wildlife Conservation, Virginia Tech, 310 West Campus Drive, Blacksburg, VA, USA
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17
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Chevin L, Gompert Z, Nosil P. Frequency dependence and the predictability of evolution in a changing environment. Evol Lett 2021; 6:21-33. [PMID: 35127135 PMCID: PMC8802243 DOI: 10.1002/evl3.266] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/07/2021] [Revised: 10/28/2021] [Accepted: 11/22/2021] [Indexed: 11/09/2022] Open
Abstract
Frequency‐dependent (FD) selection, whereby fitness and selection depend on the genetic or phenotypic composition of the population, arises in numerous ecological contexts (competition, mate choice, crypsis, mimicry, etc.) and can strongly impact evolutionary dynamics. In particular, negative frequency‐dependent selection (NFDS) is well known for its ability to potentially maintain stable polymorphisms, but it has also been invoked as a source of persistent, predictable frequency fluctuations. However, the conditions under which such fluctuations persist are not entirely clear. In particular, previous work rarely considered that FD is unlikely to be the sole driver of evolutionary dynamics when it occurs, because most environments are not static but instead change dynamically over time. Here, we investigate how FD interacts with a temporally fluctuating environment to shape the dynamics of population genetic change. We show that a simple metric introduced by Lewontin, the slope of frequency change against frequency near equilibrium, works as a key criterion for distinguishing microevolutionary outcomes, even in a changing environment. When this slope D is between 0 and –2 (consistent with the empirical examples we review), substantial fluctuations would not persist on their own in a large population occupying a constant environment, but they can still be maintained indefinitely as quasi‐cycles fueled by environmental noise or genetic drift. However, such moderate NFDS buffers and temporally shifts evolutionary responses to periodic environments (e.g., seasonality). Stronger FD, with slope D < –2, can produce self‐sustained cycles that may overwhelm responses to a changing environment, or even chaos that fundamentally limits predictability. This diversity of expected outcomes, together with the empirical evidence for both FD and environment‐dependent selection, suggests that the interplay of internal dynamics with external forcing should be investigated more systematically to reach a better understanding and prediction of evolution.
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Affiliation(s)
| | | | - Patrik Nosil
- CEFE, Univ Montpellier, CNRS, EPHE, IRD Montpellier 34090 France
- Department of Biology Utah State University Logan Utah 84322 USA
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18
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Zettlemoyer MA, DeMarche ML. Dissecting impacts of phenological shifts for performance across biological scales. Trends Ecol Evol 2021; 37:147-157. [PMID: 34763943 DOI: 10.1016/j.tree.2021.10.004] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/20/2021] [Revised: 10/06/2021] [Accepted: 10/08/2021] [Indexed: 11/28/2022]
Abstract
Although phenological shifts in response to climate are often assumed to benefit species' performance and viability, phenology's role in allowing population persistence and mediating species-level responses in the face of climate change remain unclear. Here, we develop a framework to understand when and why phenological shifts at three biological scales will influence performance: individuals, populations, and macroecological patterns. Specifically, we highlight three underexplored assumptions: (i) individual variability in phenology does not affect population fitness; (ii) population growth rates are sensitive to vital rates affected by phenology; and (iii) phenology mediates species-level responses to climate change including patterns of extinction, invasion, and range shifts. We outline promising methods for understanding how phenological shifts will influence performance within and across biological scales.
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Affiliation(s)
- Meredith A Zettlemoyer
- Department of Plant Biology, University of Georgia, 120 Carlton St., 2502 Miller Plant Sciences, Athens, GA 30602, USA.
| | - Megan L DeMarche
- Department of Plant Biology, University of Georgia, 120 Carlton St., 2502 Miller Plant Sciences, Athens, GA 30602, USA
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19
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Caignard T, Kremer A, Bouteiller XP, Parmentier J, Louvet JM, Venner S, Delzon S. Counter-gradient variation of reproductive effort in a widely distributed temperate oak ( Quercus petraea). Funct Ecol 2021; 35:1745-1755. [PMID: 36825207 PMCID: PMC7614218 DOI: 10.1111/1365-2435.13830] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
The genetic and phenotypic variability of life history traits determines the demographic attributes of tree populations and, thus, their responses to anthropogenic climate change. Growth- and survival-related traits have been widely studied in forest ecology, but little is known about the determinism of reproductive traits.Using an elevation gradient experiment in the Pyrenees we assessed the degree to which variations in reproductive effort along climatic gradients are environmentally or genetically driven, by comparing oak populations (Quercus petraea) growing under field and common garden conditions.In situ monitoring revealed a decline in reproductive effort with increasing elevation and decreasing temperature. In common garden conditions, significant genetic differentiation was observed between provenances for reproduction and growth: trees from cold environments (high elevations) grew more slowly, and produced larger acorns in larger numbers. Our observations show that genetic and phenotypic clines for reproductive traits have opposite signs (counter-gradient) along the environmental gradient as opposed to growth, for which genetic variation parallels phenotypic variation (co-gradient).The counter-gradient found here for reproductive effort reveals that genetic variation partly counteracts the phenotypic effect of temperature, moderating the change in reproductive effort according to temperature. We consider the possible contribution to this counter-gradient in reproductive effort as an evolutionary trade-off between reproduction and growth.
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Affiliation(s)
| | | | | | - Julien Parmentier
- INRAE, UE 0393, Unité Expérimentale Arboricole, Centre de Recherche Bordeaux-Aquitaine, Toulenne, France
| | | | - Samuel Venner
- Laboratoire de Biométrie et Biologie Evolutive UMR 5558-CNRS, Université de Lyon, Université Claude Bernard Lyon 1, Villeurbanne, F-69365, Lyon, France
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20
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Shin N, Saitoh TM, Nasahara KN. How did the characteristics of the growing season change during the past 100 years at a steep river basin in Japan? PLoS One 2021; 16:e0255078. [PMID: 34330144 PMCID: PMC8324334 DOI: 10.1371/journal.pone.0255078] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2020] [Accepted: 07/11/2021] [Indexed: 11/18/2022] Open
Abstract
The effects of climate change on plant phenological events such as flowering, leaf flush, and leaf fall may be greater in steep river basins than at the horizontal scale of countries and continents. This possibility is due to the effect of temperature on plant phenology and the difference between vertical and horizontal gradients in temperature sensitivities. We calculated the dates of the start (SGS) and end of the growing season (EGS) in a steep river basin located in a mountainous region of central Japan over a century timescale by using a degree-day phenological model based on long-term, continuous, in situ observations. We assessed the generality and representativeness of the modelled SGS and EGS dates by using phenological events, live camera images taken at multiple points in the basin, and satellite observations made at a fine spatial resolution. The sensitivity of the modelled SGS and EGS dates to elevation changed from 3.29 days (100 m)−1 (−5.48 days °C−1) and −2.89 days (100 m)−1 (4.81 days °C−1), respectively, in 1900 to 2.85 days (100 m)−1 (−4.75 days °C−1) and −2.84 day (100 m)−1 (4.73 day °C−1) in 2019. The long-term trend of the sensitivity of the modelled SGS date to elevation was −0.0037 day year−1 per 100 m, but the analogous trend in the case of the modelled EGS date was not significant. Despite the need for further studies to improve the generality and representativeness of the model, the development of degree-day phenology models in multiple, steep river basins will deepen our ecological understanding of the sensitivity of plant phenology to climate change.
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Affiliation(s)
- Nagai Shin
- Earth Surface System Research Center, Research Institute for Global Change, Japan Agency for Marine-Earth Science and Technology (JAMSTEC), Kanazawa-ku, Yokohama, Japan
- River Basin Research Center, Gifu University, Gifu, Japan
- * E-mail:
| | - Taku M. Saitoh
- River Basin Research Center, Gifu University, Gifu, Japan
| | - Kenlo Nishida Nasahara
- Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki, Japan
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21
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Zettlemoyer MA, Peterson ML. Does Phenological Plasticity Help or Hinder Range Shifts Under Climate Change? Front Ecol Evol 2021. [DOI: 10.3389/fevo.2021.689192] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022] Open
Abstract
Climate warming is predicted to shift species’ ranges as previously uninhabitable environments just beyond the leading range edges become suitable habitat and trailing range edges become increasingly unsuitable. Understanding which aspects of the environment and species traits mediate these range shifts is critical for understanding species’ possible redistributions under global change, yet we have a limited understanding of the ecological and evolutionary responses underlying population spread or extinction at species’ range edges. Within plant populations, shifts in flowering phenology have been one of the strongest and most consistent responses to climate change, and are likely to play an important role in mediating population dynamics within and beyond species’ ranges. However, the role of phenological shifts, and particularly phenological plasticity, in species’ range shifts remains relatively unstudied. Here, we synthesize literature on phenology, plasticity, and adaptation to suggest ways in which phenological responses to climate may vary across species’ ranges and review the empirical evidence for and against these hypotheses. We then outline how phenological plasticity could facilitate or hinder persistence and potential consequences of phenological plasticity in range expansions, including phenological cues, shifts in correlated traits, altered species interactions, and effects on gene flow. Finally, we suggest future avenues for research, such as characterizing reaction norms for phenology across a species’ range and in beyond-the-range transplant experiments. Given the prevalence and magnitude of phenological shifts, future work should carefully dissect its costs and benefits for population persistence, and incorporate phenological plasticity into models predicting species’ persistence and geographic range shifts under climate change.
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22
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Ensing DJ, Sora DMDH, Eckert CG. Chronic selection for early reproductive phenology in an annual plant across a steep, elevational gradient of growing season length. Evolution 2021; 75:1681-1698. [PMID: 34048598 DOI: 10.1111/evo.14274] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/20/2020] [Revised: 04/08/2021] [Accepted: 04/20/2021] [Indexed: 01/02/2023]
Abstract
Colonization along ubiquitous gradients of growing season length should require adaptation of phenological traits, driven by natural selection. Although phenology often varies with season length and genetic differentiation in phenological traits sometimes seems adaptive, few studies test whether natural selection is responsible for these patterns. The annual plant Rhinanthus minor is genetically differentiated for phenology across a 1000-m elevational gradient of growing season length in the Canadian Rocky Mountains. We estimated phenotypic selection on five phenological traits for three generations of naturally occurring individuals at 12 sites (n = 10,112), and two generations of genetically and phenotypically more variable transplanted populations at nine of these sites (n = 24,611). Selection was weak for most traits, but consistently favored early flowering across the gradient rather than only under short seasons. There was no evidence that apparent selection favoring early reproduction arose from failure to consider all components of fitness, or variation in other correlated phenological traits. Instead, selection for earlier flowering may be balanced by selection for strong cogradient phenological plasticity that indirectly favors later flowering. However, this probably does not explain the consistency of selection on flowering time across this steep, elevational gradient of growing season length.
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Affiliation(s)
- David J Ensing
- Department of Biology, Queen's University, Kingston, ON, K7L 3N6, Canada
| | - Dylan M D H Sora
- Department of Biology, Queen's University, Kingston, ON, K7L 3N6, Canada
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23
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Savage JA, Chuine I. Coordination of spring vascular and organ phenology in deciduous angiosperms growing in seasonally cold climates. THE NEW PHYTOLOGIST 2021; 230:1700-1715. [PMID: 33608961 DOI: 10.1111/nph.17289] [Citation(s) in RCA: 19] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/17/2020] [Accepted: 12/17/2020] [Indexed: 05/29/2023]
Abstract
In seasonally cold climates, many woody plants tolerate chilling and freezing temperatures by ceasing growth, shedding leaves and entering dormancy. At the same time, transport within these plants often decreases as the vascular system exhibits reduced functionality. As spring growth requires water and nutrients, we ask the question: how much does bud, leaf and flower development depend on the vasculature in spring? In this review, we present what is known about leaf, flower and vascular phenology to sort out this question. In early stages of bud development, buds rely on internal resources and do not appear to require vascular support. The situation changes during organ expansion, after leaves and flowers reconnect to the stem vascular system. However, there are major gaps in our understanding of the timing of vascular development, especially regarding the phloem, as well as the synchronization among leaves, flowers, stem and root vasculature. We believe these gaps are mainly the outcome of research completed in silo and urge future work to take a more integrative approach. We highlight current challenges and propose future directions to make rapid progress on this important topic in upcoming years.
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Affiliation(s)
- Jessica A Savage
- Department of Biology, University of Minnesota, Duluth, MN, 55811, USA
| | - Isabelle Chuine
- CEFE, Univ. Montpellier, CNRS, EPHE, IRD, Univ. Paul Valéry Montpellier 3, Montpellier, FR-34293, Cedex 5, France
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24
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Godineau C, Ronce O, Devaux C. Assortative mating can help adaptation of flowering time to a changing climate: Insights from a polygenic model. J Evol Biol 2021; 35:491-508. [PMID: 33794053 PMCID: PMC9292552 DOI: 10.1111/jeb.13786] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2020] [Revised: 01/15/2021] [Accepted: 03/19/2021] [Indexed: 11/28/2022]
Abstract
Several empirical studies report fast evolutionary changes in flowering time in response to contemporary climate change. Flowering time is a polygenic trait under assortative mating, since flowering time of mates must overlap. Here, we test whether assortative mating, compared with random mating, can help better track a changing climate. For each mating pattern, our individual‐based model simulates a population evolving in a climate characterized by stabilizing selection around an optimal flowering time, which can change directionally and/or fluctuate. We also derive new analytical predictions from a quantitative genetics model for the expected genetic variance at equilibrium, and its components, the lag of the population to the optimum and the population mean fitness. We compare these predictions between assortative and random mating, and to our simulation results. Assortative mating, compared with random mating, has antagonistic effects on genetic variance: it generates positive associations among similar allelic effects, which inflates the genetic variance, but it decreases genetic polymorphism, which depresses the genetic variance. In a stationary environment with substantial stabilizing selection, assortative mating affects little the genetic variance compared with random mating. In a changing climate, assortative mating however increases genetic variance compared to random mating, which diminishes the lag of the population to the optimum, and in most scenarios translates into a fitness advantage relative to random mating. The magnitude of this fitness advantage depends on the extent to which genetic variance limits adaptation, being larger for faster environmental changes and weaker stabilizing selection.
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Affiliation(s)
- Claire Godineau
- Institut des Sciences de l'Évolution, Université de Montpellier, CNRS, IRD, EPHE, Montpellier, France
| | - Ophélie Ronce
- Institut des Sciences de l'Évolution, Université de Montpellier, CNRS, IRD, EPHE, Montpellier, France.,CNRS, Biodiversity Research Center, University of British Columbia, Vancouver, BC, Canada
| | - Céline Devaux
- Institut des Sciences de l'Évolution, Université de Montpellier, CNRS, IRD, EPHE, Montpellier, France
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25
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Gauzere J, Klein EK, Brendel O, Davi H, Oddou-Muratorio S. Microgeographic adaptation and the effect of pollen flow on the adaptive potential of a temperate tree species. THE NEW PHYTOLOGIST 2020; 227:641-653. [PMID: 32167572 DOI: 10.1111/nph.16537] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/08/2019] [Accepted: 02/29/2020] [Indexed: 06/10/2023]
Abstract
In species with long-distance dispersal capacities and inhabiting a large ecological niche, local selection and gene flow are expected to be major evolutionary forces affecting the genetic adaptation of natural populations. Yet, in species such as trees, evidence of microgeographic adaptation and the quantitative assessment of the impact of gene flow on adaptive genetic variation are still limited. Here, we used extensive genetic and phenotypic data from European beech seedlings collected along an elevation gradient, and grown in a common garden, to study the signature of selection on the divergence of eleven potentially adaptive traits, and to assess the role of gene flow in resupplying adaptive genetic variation. We found a significant signal of adaptive differentiation among plots separated by < 1 km, with selection acting on growth and phenological traits. Consistent with theoretical expectations, our results suggest that pollen dispersal contributes to increase genetic diversity for these locally differentiated traits. Our results thus highlight that local selection is an important evolutionary force in natural tree populations and suggest that management interventions to facilitate movement of gametes along short ecological gradients would boost genetic diversity of individual tree populations, and enhance their adaptive potential to rapidly changing environments.
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Affiliation(s)
- Julie Gauzere
- INRAE, URFM, Avignon, 84000, France
- INRAE, BioSP, Avignon, 84000, France
- Institute of Evolutionary Biology, School of Biological Sciences, University of Edinburgh, Edinburgh, EH9 3JT, UK
| | | | - Oliver Brendel
- Université de Lorraine, AgroParisTech, INRAE, UMR Silva, Nancy, 54000, France
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