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Ur Rahman S, Han JC, Ahmad M, Ashraf MN, Khaliq MA, Yousaf M, Wang Y, Yasin G, Nawaz MF, Khan KA, Du Z. Aluminum phytotoxicity in acidic environments: A comprehensive review of plant tolerance and adaptation strategies. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2024; 269:115791. [PMID: 38070417 DOI: 10.1016/j.ecoenv.2023.115791] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/20/2023] [Revised: 11/28/2023] [Accepted: 12/04/2023] [Indexed: 01/12/2024]
Abstract
Aluminum (Al), a non-essential metal for plant growth, exerts significant phytotoxic effects, particularly on root growth. Anthropogenic activities would intensify Al's toxic effects by releasing Al3+ into the soil solution, especially in acidic soils with a pH lower than 5.5 and rich mineral content. The severity of Al-induced phytotoxicity varies based on factors such as Al concentration, ionic form, plant species, and growth stages. Al toxicity leads to inhibited root and shoot growth, reduced plant biomass, disrupted water uptake causing nutritional imbalance, and adverse alterations in physiological, biochemical, and molecular processes. These effects collectively lead to diminished plant yield and quality, along with reduced soil fertility. Plants employ various mechanisms to counter Al toxicity under stress conditions, including sequestering Al in vacuoles, exuding organic acids (OAs) like citrate, oxalate, and malate from root tip cells to form Al-complexes, activating antioxidative enzymes, and overexpressing Al-stress regulatory genes. Recent advancements focus on enhancing the exudation of OAs to prevent Al from entering the plant, and developing Al-tolerant varieties. Gene transporter families, such as ATP-Binding Cassette (ABC), Aluminum-activated Malate Transporter (ALMT), Natural resistance-associated macrophage protein (Nramp), Multidrug and Toxic compounds Extrusion (MATE), and aquaporin, play a crucial role in regulating Al toxicity. This comprehensive review examined recent progress in understanding the cytotoxic impact of Al on plants at the cellular and molecular levels. Diverse strategies developed by both plants and scientists to mitigate Al-induced phytotoxicity were discussed. Furthermore, the review explored recent genomic developments, identifying candidate genes responsible for OAs exudation, and delved into genome-mediated breeding initiatives, isolating transgenic and advanced breeding lines to cultivate Al-tolerant plants.
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Affiliation(s)
- Shafeeq Ur Rahman
- Water Science and Environmental Engineering Research Center, College of Chemical and Environmental Engineering, Shenzhen University, Shenzhen 518060, China; Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China.
| | - Jing-Cheng Han
- Water Science and Environmental Engineering Research Center, College of Chemical and Environmental Engineering, Shenzhen University, Shenzhen 518060, China.
| | - Muhammad Ahmad
- Water Science and Environmental Engineering Research Center, College of Chemical and Environmental Engineering, Shenzhen University, Shenzhen 518060, China
| | - Muhammad Nadeem Ashraf
- Institute of Soil and Environmental Sciences, University of Agriculture, Faisalabad 38040, Pakistan
| | | | - Maryam Yousaf
- Water Science and Environmental Engineering Research Center, College of Chemical and Environmental Engineering, Shenzhen University, Shenzhen 518060, China
| | - Yuchen Wang
- Water Science and Environmental Engineering Research Center, College of Chemical and Environmental Engineering, Shenzhen University, Shenzhen 518060, China; Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China
| | - Ghulam Yasin
- Department of Forestry and Range Management, FAS & T, Bahauddin Zakariya University Multan, Multan 60000, Pakistan
| | | | - Khalid Ali Khan
- Unit of Bee Research and Honey Production, Research Center for Advanced Materials Science (RCAMS), King Khalid University, Abha 61413, Saudi Arabia; Applied College, King Khalid University, Abha 61413, Saudi Arabia
| | - Zhenjie Du
- Farmland Irrigation Research Institute, Chinese Academy of Agricultural Sciences, Xinxiang 453002, China; Water Environment Factor Risk Assessment Laboratory of Agricultural Products Quality and Safety, Ministry of Agriculture and Rural Affairs, Xinxiang 453002, China.
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Zeng N, Huang F, Du J, Huang C, Yang Q, Zhan X, Xing B. Expeditious profiling of polycyclic aromatic hydrocarbons transport and obstruction mechanisms in crop xylem sap proteins via proteomics and molecular docking. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2024; 340:122854. [PMID: 37940018 DOI: 10.1016/j.envpol.2023.122854] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/14/2023] [Revised: 10/30/2023] [Accepted: 10/31/2023] [Indexed: 11/10/2023]
Abstract
Polycyclic aromatic hydrocarbons (PAHs) pose significant environmental risks due to their toxicity and carcinogenic properties. This research seeks to pinpoint protein targets in crop xylem sap related to PAH contamination and delve into their protein-ligand interactions using computational tools. Proteomic assessment revealed differentially expressed proteins (DEPs), which were subjected to virtual high-throughput screening. Notably, the phenanthrene's influence on xylem sap proteins in maize and wheat was more pronounced than in soybean, with DEPs expression peak at 24 h post-treatment. Maize DEPs were predominantly associated with lipid biosynthesis. Phenanthrene impacted cell membrane hydrophobicity, limiting PAH adsorption and decreasing its concentration in maize xylem sap. Wheat DEPs exhibited an increase in ABC transporters after 24 h of phenanthrene exposure. ABC transporters interacted with stress-responsive proteins like C6TIY1-Co-chaperone p23 and others that either facilitate or inhibit PAH transport, including Indeno[1,2,3-cd]Pyrene and C6TIY1-Co-chaperone protein p23. Both maize and wheat created high-affinity complexes between specific proteins and PAHs, influencing their transport. This study provides insights into the mechanisms of PAH regulation and movement within plant xylem.
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Affiliation(s)
- Nengde Zeng
- College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, Jiangsu Province, 210095, PR China; Stockbridge School of Agriculture, University of Massachusetts, Amherst, MA, 01003, USA
| | - Fei Huang
- College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, Jiangsu Province, 210095, PR China
| | - Jiani Du
- College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, Jiangsu Province, 210095, PR China
| | - Chenghao Huang
- College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, Jiangsu Province, 210095, PR China
| | - Qian Yang
- College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, Jiangsu Province, 210095, PR China
| | - Xinhua Zhan
- College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, Jiangsu Province, 210095, PR China.
| | - Baoshan Xing
- Stockbridge School of Agriculture, University of Massachusetts, Amherst, MA, 01003, USA
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Inui H, Minic Z, Hüttmann N, Fujita K, Stoykova P, Karadžić I. Cucurbita pepo contains characteristic proteins without a signal peptide in the xylem sap. JOURNAL OF PLANT PHYSIOLOGY 2023; 287:154038. [PMID: 37413840 DOI: 10.1016/j.jplph.2023.154038] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/21/2023] [Revised: 06/06/2023] [Accepted: 06/11/2023] [Indexed: 07/08/2023]
Abstract
Xylem sap is a fluid that transfers water and nutrients from the rhizosphere. This sap contains relatively low concentrations of proteins that originate from the extracellular space among the root cells. One of the characteristic proteins in the xylem sap of the Cucurbitaceae family, which includes cucumber and zucchini, is a major latex-like protein (MLP). MLPs are responsible for crop contamination through the transport of hydrophobic pollutants from the roots. However, detailed information on the content of MLPs in the xylem sap is not available. Proteomic analysis of root and xylem sap proteins from the Cucurbita pepo cultivars Patty Green (PG) and Raven (RA) showed that the xylem sap of cv. RA, a high accumulator of hydrophobic pollutants, contained four MLPs that accounted for over 85% of the total xylem sap proteins in this cultivar. The xylem sap of PG, a low accumulator, mainly contained an uncharacterized protein. The amount of each root protein between the PG and RA cultivars was significantly and positively correlated in spite of being with and without a signal peptide (SP). However, the amount of xylem sap proteins without an SP was not correlated. These results suggest that cv. RA is characterized by MLPs in the xylem sap.
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Affiliation(s)
- Hideyuki Inui
- Biosignal Research Center, Kobe University, 1-1 Rokkodaicho, Nada-ku, Kobe, Hyogo, 657-8501, Japan; Graduate School of Agricultural Science, Kobe University, 1-1 Rokkodaicho, Nada-ku, Kobe, Hyogo, 657-8501, Japan.
| | - Zoran Minic
- University of Ottawa, John L. Holmes Mass Spectrometry Facility, 10 Marie-Curie, Marion Hall, K1N 6N5, Ottawa, ON, Canada
| | - Nico Hüttmann
- University of Ottawa, John L. Holmes Mass Spectrometry Facility, 10 Marie-Curie, Marion Hall, K1N 6N5, Ottawa, ON, Canada
| | - Kentaro Fujita
- Graduate School of Agricultural Science, Kobe University, 1-1 Rokkodaicho, Nada-ku, Kobe, Hyogo, 657-8501, Japan
| | - Petya Stoykova
- Biosignal Research Center, Kobe University, 1-1 Rokkodaicho, Nada-ku, Kobe, Hyogo, 657-8501, Japan; AgroBioInstitute, 8 "Dragan Tsankov" Blvd, 1164, Sofia, Bulgaria
| | - Ivanka Karadžić
- Department of Chemistry, Faculty of Medicine, University of Belgrade, Višegradska 26, 11000, Belgrade, Serbia
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Huang C, Kurotani KI, Tabata R, Mitsuda N, Sugita R, Tanoi K, Notaguchi M. Nicotiana benthamiana XYLEM CYSTEINE PROTEASE genes facilitate tracheary element formation in interfamily grafting. HORTICULTURE RESEARCH 2023; 10:uhad072. [PMID: 37303612 PMCID: PMC10251136 DOI: 10.1093/hr/uhad072] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/12/2023] [Accepted: 04/08/2023] [Indexed: 06/13/2023]
Abstract
Grafting is a plant propagation technique widely used in agriculture. A recent discovery of the capability of interfamily grafting in Nicotiana has expanded the potential combinations of grafting. In this study, we showed that xylem connection is essential for the achievement of interfamily grafting and investigated the molecular basis of xylem formation at the graft junction. Transcriptome and gene network analyses revealed gene modules for tracheary element (TE) formation during grafting that include genes associated with xylem cell differentiation and immune response. The reliability of the drawn network was validated by examining the role of the Nicotiana benthamiana XYLEM CYSTEINE PROTEASE (NbXCP) genes in TE formation during interfamily grafting. Promoter activities of NbXCP1 and NbXCP2 genes were found in differentiating TE cells in the stem and callus tissues at the graft junction. Analysis of a Nbxcp1;Nbxcp2 loss-of-function mutant indicated that NbXCPs control the timing of de novo TE formation at the graft junction. Moreover, grafts of the NbXCP1 overexpressor increased the scion growth rate as well as the fruit size. Thus, we identified gene modules for TE formation at the graft boundary and demonstrated potential ways to enhance Nicotiana interfamily grafting.
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Affiliation(s)
- Chaokun Huang
- Graduate School of Bioagricultural Sciences, Nagoya University, Furo-cho, Chikusa-ku, Nagoya 464-8601, Japan
| | - Ken-ichi Kurotani
- Bioscience and Biotechnology Center, Nagoya University, Furo-cho, Chikusa-ku, Nagoya 464-8601, Japan
| | - Ryo Tabata
- Graduate School of Bioagricultural Sciences, Nagoya University, Furo-cho, Chikusa-ku, Nagoya 464-8601, Japan
| | - Nobutaka Mitsuda
- Bioproduction Research Institute, National Institute of Advanced Industrial Science and Technology (AIST), Tsukuba, Ibaraki 305-8566, Japan
| | - Ryohei Sugita
- Isotope Facility for Agricultural Education and Research, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Yayoi, Bunkyo-ku, Tokyo 113-8657, Japan
- Radioisotope Research Center, Nagoya University, Furo-cho, Chikusa-ku, Nagoya 464-8602, Japan
| | - Keitaro Tanoi
- Isotope Facility for Agricultural Education and Research, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Yayoi, Bunkyo-ku, Tokyo 113-8657, Japan
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Asaoka M, Sakamoto S, Gunji S, Mitsuda N, Tsukaya H, Sawa S, Hamant O, Ferjani A. Contribution of vasculature to stem integrity in Arabidopsis thaliana. Development 2023; 150:286909. [PMID: 36746191 DOI: 10.1242/dev.201156] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2022] [Accepted: 01/09/2023] [Indexed: 01/18/2023]
Abstract
In plants, coordinated growth is important for organ mechanical integrity because cells remain contiguous through their walls. So far, defects in inflorescence stem integrity in Arabidopsis thaliana have mainly been related to epidermal defects. Although these observations suggest a growth-limiting function at the stem cortex, deeper layers of the stem could also contribute to stem integrity. The nac secondary cell wall thickening promoting factor1 (nst1) nst3 double-mutant background is characterized by weaker vascular bundles without cracks. By screening for the cracking phenotype in this background, we identified a regulator of stem cracking, the transcription factor INDETERMINATE DOMAIN9 (IDD9). Stem cracking was not caused by vascular bundle breakage in plants that expressed a dominant repressor version of IDD9. Instead, cracking emerged from increased cell expansion in non-lignified interfascicular fiber cells that stretched the epidermis. This phenotype could be enhanced through CLAVATA3-dependent cell proliferation. Collectively, our results demonstrate that stem integrity relies on three additive mechanical components: the epidermis, which resists inner cell growth; cell proliferation in inner tissues; and growth heterogeneity associated with vascular bundle distribution in deep tissues.
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Affiliation(s)
- Mariko Asaoka
- Department of Biology, Tokyo Gakugei University, Koganei-shi, Tokyo 184-8501, Japan
- Laboratoire de Reproduction et Développement des Plantes, Université de Lyon, ENS de Lyon, UCBL, INRAE, CNRS, 46 Allée d'Italie, 69364 Lyon Cedex 07, France
| | - Shingo Sakamoto
- Plant Gene Regulation Research Group, Bioproduction Research Institute, National Institute of Advanced Industrial Science and Technology (AIST), Higashi 1-1-1, Tsukuba, Ibaraki 305-8566, Japan
| | - Shizuka Gunji
- Department of Biology, Tokyo Gakugei University, Koganei-shi, Tokyo 184-8501, Japan
| | - Nobutaka Mitsuda
- Plant Gene Regulation Research Group, Bioproduction Research Institute, National Institute of Advanced Industrial Science and Technology (AIST), Higashi 1-1-1, Tsukuba, Ibaraki 305-8566, Japan
| | - Hirokazu Tsukaya
- Department of Biological Sciences, Graduate School of Science, The University of Tokyo, Tokyo 113-0033, Japan
| | - Shinichiro Sawa
- International Research Center for Agriculture and Environmental Biology, Kumamoto University, Kumamoto 860-8555, Japan
| | - Olivier Hamant
- Laboratoire de Reproduction et Développement des Plantes, Université de Lyon, ENS de Lyon, UCBL, INRAE, CNRS, 46 Allée d'Italie, 69364 Lyon Cedex 07, France
| | - Ali Ferjani
- Department of Biology, Tokyo Gakugei University, Koganei-shi, Tokyo 184-8501, Japan
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Kawaguchi K, Nakaune M, Ma JF, Kojima M, Takebayashi Y, Sakakibara H, Otagaki S, Matsumoto S, Shiratake K. Plant Hormone and Inorganic Ion Concentrations in the Xylem Exudate of Grafted Plants Depend on the Scion-Rootstock Combination. PLANTS (BASEL, SWITZERLAND) 2022; 11:2594. [PMID: 36235460 PMCID: PMC9571263 DOI: 10.3390/plants11192594] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/09/2022] [Revised: 09/22/2022] [Accepted: 09/26/2022] [Indexed: 06/16/2023]
Abstract
In grafted plants, inorganic ions and plant hormones in the xylem exudate transported from the rootstock to the scion directly or indirectly affect the scion, thereby improving the traits. Therefore, the concentration of these components in the xylem exudate of grafted plants may be an indicator for rootstock selection. On the other hand, few reports have presented a comprehensive analysis of substances transferred from the rootstock to the scion in plants grafted onto different rootstocks, primarily commercial cultivars. In this study, we measured inorganic ions and plant hormones in the xylem exudate from the rootstock to the scion in various grafted plants of tomato and eggplant. The results revealed that the concentrations of inorganic ions and plant hormones in the xylem exudate significantly differed depending on the type of rootstock. In addition, we confirmed the concentration of the inorganic ions and plant hormones in the xylem exudate of plants grafted onto the same tomato rootstock cultivars as rootstock with tomato or eggplant as the scions. As a result, the concentrations of inorganic ions and plant hormones in the xylem exudate were significantly different in the grafted plants with eggplant compared with tomato as the scion. These results suggest that signals from the scion (shoot) control the inorganic ions and plant hormones transported from the rootstock (root).
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Affiliation(s)
- Kohei Kawaguchi
- Graduate School of Bioagricultural Sciences, Nagoya University, Chikusa, Nagoya 464-8601, Japan
| | - Makoto Nakaune
- Saitama Agricultural Technology Research Center, Sugahiro, Kumagaya 360-0102, Japan
| | - Jian Feng Ma
- Research Institute for Bioresources, Okayama University, Chuo, Kurashiki 710-0046, Japan
| | - Mikiko Kojima
- RIKEN Center for Sustainable Resource Science, Tsurumi, Yokohama 230-0045, Japan
| | - Yumiko Takebayashi
- RIKEN Center for Sustainable Resource Science, Tsurumi, Yokohama 230-0045, Japan
| | - Hitoshi Sakakibara
- Graduate School of Bioagricultural Sciences, Nagoya University, Chikusa, Nagoya 464-8601, Japan
- RIKEN Center for Sustainable Resource Science, Tsurumi, Yokohama 230-0045, Japan
| | - Shungo Otagaki
- Graduate School of Bioagricultural Sciences, Nagoya University, Chikusa, Nagoya 464-8601, Japan
| | - Shogo Matsumoto
- Graduate School of Bioagricultural Sciences, Nagoya University, Chikusa, Nagoya 464-8601, Japan
| | - Katsuhiro Shiratake
- Graduate School of Bioagricultural Sciences, Nagoya University, Chikusa, Nagoya 464-8601, Japan
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Zeng N, Zhu Y, Gu S, Wang D, Chen R, Feng Q, Zhan X, Gardea-Torresdey JL. Mechanistic insights into phenanthrene acropetal translocation via wheat xylem: Separation and identification of transfer proteins. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 838:155919. [PMID: 35577096 DOI: 10.1016/j.scitotenv.2022.155919] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/03/2022] [Revised: 05/09/2022] [Accepted: 05/09/2022] [Indexed: 06/15/2023]
Abstract
Polycyclic aromatic hydrocarbons (PAHs) have the potential to cause cancer, teratogenicity, and mutagenesis in humans. Long-term plant safe production relies on how PAHs are transported and coordinated across organs. However, the acropetal transfer mechanism of PAHs in staple crop stems, particularly in xylem, a critical path, is unknown. Herein, we first confirmed the presence of specific interaction between the proteins and phenanthrene by employing the magnetic phenanthrene-bound bead immunoassay and label free liquid chromatograph mass spectrometer (LC-MS/MS), suggesting that peroxidase (uniprot accession: A0A3B5XXD0) and unidentified proteins (uniprot accession: A0A3B6LUC6) may function as the carriers to load and acropetally translocate phenanthrene (a model PAH) in wheat xylem. This specified binding of protein-phenanthrene may form through hydrophobic interactions in the conservative binding region, as revealed by protein structural investigations and molecular docking. To further investigate the role of these proteins in phenanthrene solubilization, phenanthrene exposure was conducted: a substantial quantity of peroxidase was produced; an unusually high expression of uncharacterized proteins was observed, indicating their positive effects in the acropetal transfer of phenanthrene in wheat xylem. These data confirmed that the two proteins are crucial in the solubilization of phenanthrene in wheat xylem sap. Our findings provide fresh light on the molecular mechanism of PAH loading in plant xylem and techniques for ensuring the security of staple crops and improving the efficacy of phytoremediation in a PAH-contaminated environment.
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Affiliation(s)
- Nengde Zeng
- College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, Jiangsu Province 210095, People's Republic of China
| | - Yuting Zhu
- College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, Jiangsu Province 210095, People's Republic of China
| | - Suodi Gu
- College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, Jiangsu Province 210095, People's Republic of China
| | - Dongru Wang
- College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, Jiangsu Province 210095, People's Republic of China
| | - Ruonan Chen
- College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, Jiangsu Province 210095, People's Republic of China
| | - Qiurun Feng
- College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, Jiangsu Province 210095, People's Republic of China
| | - Xinhua Zhan
- College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, Jiangsu Province 210095, People's Republic of China.
| | - Jorge L Gardea-Torresdey
- Department of Chemistry & Biochemistry, The University of Texas at El Paso, El Paso, TX 79968, United States
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Sin WC, Lam HM, Ngai SM. Identification of Diverse Stress-Responsive Xylem Sap Peptides in Soybean. Int J Mol Sci 2022; 23:ijms23158641. [PMID: 35955768 PMCID: PMC9369194 DOI: 10.3390/ijms23158641] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/08/2022] [Revised: 07/29/2022] [Accepted: 08/02/2022] [Indexed: 02/04/2023] Open
Abstract
Increasing evidence has revealed that plant secretory peptides are involved in the long-distance signaling pathways that help to regulate plant development and signal stress responses. In this study, we purified small peptides from soybean (Glycine max) xylem sap via o-chlorophenol extraction and conducted an in-depth peptidomic analysis using a mass spectrometry (MS) and bioinformatics approach. We successfully identified 14 post-translationally modified peptide groups belonging to the peptide families CEP (C-terminally encoded peptides), CLE (CLAVATA3/embryo surrounding region-related), PSY (plant peptides containing tyrosine sulfation), and XAP (xylem sap-associated peptides). Quantitative PCR (qPCR) analysis showed unique tissue expression patterns among the peptide-encoding genes. Further qPCR analysis of some of the peptide-encoding genes showed differential stress-response profiles toward various abiotic stress factors. Targeted MS-based quantification of the nitrogen deficiency-responsive peptides, GmXAP6a and GmCEP-XSP1, demonstrated upregulation of peptide translocation in xylem sap under nitrogen-deficiency stress. Quantitative proteomic analysis of GmCEP-XSP1 overexpression in hairy soybean roots revealed that GmCEP-XSP1 significantly impacts stress response-related proteins. This study provides new insights that root-to-shoot peptide signaling plays important roles in regulating plant stress-response mechanisms.
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Shi Q, Xiong Y, Kaur P, Sy ND, Gan J. Contaminants of emerging concerns in recycled water: Fate and risks in agroecosystems. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 814:152527. [PMID: 34953850 DOI: 10.1016/j.scitotenv.2021.152527] [Citation(s) in RCA: 22] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/30/2021] [Revised: 11/23/2021] [Accepted: 12/15/2021] [Indexed: 06/14/2023]
Abstract
Recycled water (RW) has been increasingly recognized as a valuable source of water for alleviating the global water crisis. When RW is used for agricultural irrigation, many contaminants of emerging concern (CECs) are introduced into the agroecosystem. The ubiquity of CECs in field soil, combined with the toxic, carcinogenic, or endocrine-disrupting nature of some CECs, raises significant concerns over their potential risks to the environment and human health. Understanding such risks and delineating the fate processes of CECs in the water-soil-plant continuum contributes to the safe reuse of RW in agriculture. This review summarizes recent findings and provides an overview of CECs in the water-soil-plant continuum, including their occurrence in RW and irrigated soil, fate processes in agricultural soil, offsite transport including runoff and leaching, and plant uptake, metabolism, and accumulation. The potential ecological and human health risks of CECs are also discussed. Studies to date have shown limited accumulation of CECs in irrigated soils and plants, which may be attributed to multiple attenuation processes in the rhizosphere and plant, suggesting minimal health risks from RW-fed food crops. However, our collective understanding of CECs is rather limited and knowledge of their offsite movement and plant accumulation is particularly scarce for field conditions. Given a large number of CECs and their occurrence at trace levels, it is urgent to develop strategies to prioritize CECs so that future research efforts are focused on CECs with elevated risks for offsite contamination or plant accumulation. Irrigating specific crops such as feed crops and fruit trees may be a viable option to further minimize potential plant accumulation under field conditions. To promote the beneficial reuse of RW in agriculture, it is essential to understand the human health and ecological risks imposed by CEC mixtures and metabolites.
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Affiliation(s)
- Qingyang Shi
- Department of Environmental Sciences, University of California, Riverside, CA 92521, USA.
| | - Yaxin Xiong
- Department of Environmental Sciences, University of California, Riverside, CA 92521, USA
| | - Parminder Kaur
- Department of Environmental Sciences, University of California, Riverside, CA 92521, USA
| | - Nathan Darlucio Sy
- Department of Environmental Sciences, University of California, Riverside, CA 92521, USA
| | - Jay Gan
- Department of Environmental Sciences, University of California, Riverside, CA 92521, USA
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The Plant Defense Signal Salicylic Acid Activates the RpfB-Dependent Quorum Sensing Signal Turnover via Altering the Culture and Cytoplasmic pH in the Phytopathogen Xanthomonas campestris. mBio 2022; 13:e0364421. [PMID: 35254135 PMCID: PMC9040794 DOI: 10.1128/mbio.03644-21] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023] Open
Abstract
Plant colonization by phytopathogens is a very complex process in which numerous factors are involved. Upon infection by phytopathogens, plants produce salicylic acid (SA) that triggers gene expression within the plant to counter the invading pathogens. The present study demonstrated that SA signal also directly acts on the quorum-sensing (QS) system of the invading pathogen Xanthomonas campestris pv. campestris to affect its virulence by inducing turnover of the diffusible signaling factor (DSF) family QS signal. First, Xanthomonas campestris pv. campestris infection induces SA biosynthesis in the cabbage host plant. SA cannot be degraded by Xanthomonas campestris pv. campestris during culturing. Exogenous addition of SA or endogenous production of SA induces DSF signal turnover during late growth phase of Xanthomonas campestris pv. campestris in XYS medium that mimics plant vascular environments. Further, the DSF turnover gene rpfB is required for SA induction of DSF turnover. However, SA does not affect the expression of rpfB and DSF biosynthesis gene rpfF at the transcriptional level. SA induction of DSF turnover only occurs under acidic conditions in XYS medium. Furthermore, addition of SA to XYS medium significantly increased both culture and cytoplasmic pH. Increased cytoplasmic pH induced DSF turnover in a rpfB-dependent manner. In vitro RpfB-dependent DSF turnover activity increased when pH increased from 6 to 8. SA exposure did not affect the RpfB-dependent DSF turnover in vitro. Finally, SA-treated Xanthomonas campestris pv. campestris strain exhibited enhanced virulence when inoculated on cabbage. These results provide new insight into the roles of SA in host plants and the molecular interactions between Xanthomonas campestris pv. campestris and cruciferous plants.
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Zhang Q, Yao Y, Wang Y, Zhang Q, Cheng Z, Li Y, Yang X, Wang L, Sun H. Plant accumulation and transformation of brominated and organophosphate flame retardants: A review. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2021; 288:117742. [PMID: 34329057 DOI: 10.1016/j.envpol.2021.117742] [Citation(s) in RCA: 33] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/26/2021] [Revised: 06/16/2021] [Accepted: 07/04/2021] [Indexed: 06/13/2023]
Abstract
Plants can take up and transform brominated flame retardants (BFRs) and organophosphate flame retardants (OPFRs) from soil, water and the atmosphere, which is of considerable significance to the geochemical cycle of BFRs and OPFRs and their human exposure. However, the current understanding of the plant uptake, translocation, accumulation, and metabolism of BFRs and OPFRs in the environment remains very limited. In this review, recent studies on the accumulation and transformation of BFRs and OPFRs in plants are summarized, the main factors affecting plant accumulation from the aspects of root uptake, foliar uptake, and plant translocation are presented, and the metabolites and metabolic pathways of BFRs and OPFRs in plants are analyzed. It was found that BFRs and OPFRs can be taken up by plants through partitioning to root lipids, as well as through gaseous and particle-bound deposition to the leaves. Their microscopic distribution in roots and leaves is important for understanding their accumulation behaviors. BFRs and OPFRs can be translocated in the xylem and phloem, but the specific transport pathways and mechanisms need to be further studied. BFRs and OPFRs can undergo phase I and phase II metabolism in plants. The identification, quantification and environmental fate of their metabolites will affect the assessment of their ecological and human exposure risks. Based on the issues mentioned above, some key directions worth studying in the future are proposed.
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Affiliation(s)
- Qing Zhang
- MOE Key Laboratory of Pollution Processes and Environmental Criteria, College of Environmental Science and Engineering, Nankai University, Tianjin, 300350, China; School of Environment and Energy, Peking University Shenzhen Graduate School, Shenzhen, 518055, China
| | - Yiming Yao
- MOE Key Laboratory of Pollution Processes and Environmental Criteria, College of Environmental Science and Engineering, Nankai University, Tianjin, 300350, China.
| | - Yu Wang
- MOE Key Laboratory of Pollution Processes and Environmental Criteria, College of Environmental Science and Engineering, Nankai University, Tianjin, 300350, China
| | - Qiuyue Zhang
- MOE Key Laboratory of Pollution Processes and Environmental Criteria, College of Environmental Science and Engineering, Nankai University, Tianjin, 300350, China
| | - Zhipeng Cheng
- MOE Key Laboratory of Pollution Processes and Environmental Criteria, College of Environmental Science and Engineering, Nankai University, Tianjin, 300350, China
| | - Yongcheng Li
- MOE Key Laboratory of Pollution Processes and Environmental Criteria, College of Environmental Science and Engineering, Nankai University, Tianjin, 300350, China
| | - Xiaomeng Yang
- MOE Key Laboratory of Pollution Processes and Environmental Criteria, College of Environmental Science and Engineering, Nankai University, Tianjin, 300350, China
| | - Lei Wang
- MOE Key Laboratory of Pollution Processes and Environmental Criteria, College of Environmental Science and Engineering, Nankai University, Tianjin, 300350, China
| | - Hongwen Sun
- MOE Key Laboratory of Pollution Processes and Environmental Criteria, College of Environmental Science and Engineering, Nankai University, Tianjin, 300350, China
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Debbarma J, Saikia B, Singha DL, Maharana J, Velmuruagan N, Dekaboruah H, Arunkumar KP, Chikkaputtaiah C. XSP10 and SlSAMT, Fusarium wilt disease responsive genes of tomato ( Solanum lycopersicum L.) express tissue specifically and interact with each other at cytoplasm in vivo. PHYSIOLOGY AND MOLECULAR BIOLOGY OF PLANTS : AN INTERNATIONAL JOURNAL OF FUNCTIONAL PLANT BIOLOGY 2021; 27:1559-1575. [PMID: 34366597 PMCID: PMC8295444 DOI: 10.1007/s12298-021-01025-y] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/14/2021] [Revised: 06/22/2021] [Accepted: 06/23/2021] [Indexed: 06/13/2023]
Abstract
Fusarium wilt caused by Fusarium oxysporum f. sp. lycopersici (Fol) is a major fungal disease of tomato (Solanum lycopersicum L.). Xylem sap protein 10 (XSP10) and Salicylic acid methyl transferase (SlSAMT) have been identified as putative negative regulatory genes associated with Fusarium wilt of tomato. Despite their importance as potential genes for developing Fusarium wilt disease tolerance, very little knowledge is available about their expression, cell biology, and functional genomics. Semi-quantitative and quantitative real-time PCR expression analysis of XSP10 and SlSAMT, in this study, revealed higher expression in root and flower tissue respectively in different tomato cultivars viz. Micro-Tom (MT), Arka Vikas (AV), and Arka Abhed (AA). Therefore, the highly up-regulated expression of XSP10 and SlSAMT in biotic stress susceptible tomato cultivar (AV) than a multiple disease resistant cultivar (AA) suggested the disease susceptibility nature of these genes for Fusarium wilt. Sub-cellular localization analysis through the expression of gateway cloning constructs in tomato protoplasts and seedlings showed the predominant localization of XSP10 in the nucleus and SlSAMT at the cytoplasm. A strong in vivo protein-protein interaction of XSP10 with SlSAMT at cytoplasm from bi-molecular fluorescent complementation study suggested that these two proteins function together in regulating responses to Fusarium wilt tolerance in tomato. SUPPLEMENTARY INFORMATION The online version contains supplementary material available at 10.1007/s12298-021-01025-y.
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Affiliation(s)
- Johni Debbarma
- Biological Sciences and Technology Division, CSIR-North East Institute of Science and Technology (CSIR-NEIST), Jorhat, 785006 Assam India
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, 201 002 Uttar Pradesh India
| | - Banashree Saikia
- Biological Sciences and Technology Division, CSIR-North East Institute of Science and Technology (CSIR-NEIST), Jorhat, 785006 Assam India
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, 201 002 Uttar Pradesh India
| | - Dhanawantari L. Singha
- Biological Sciences and Technology Division, CSIR-North East Institute of Science and Technology (CSIR-NEIST), Jorhat, 785006 Assam India
| | - Jitendra Maharana
- Distributed Information Centre (DIC), Department of Agricultural Biotechnology, Assam Agricultural University, Jorhat, Assam India
- Present Address: Institute of Biological Chemistry, Academia Sinica, Taipei, 11529 Taiwan
| | - Natarajan Velmuruagan
- Biological Sciences Division, Branch Laboratory-Itanagar, CSIR-NEIST, Naharlagun, 791110 Arunachal Pradesh India
| | - Hariprasanna Dekaboruah
- Biological Sciences and Technology Division, CSIR-North East Institute of Science and Technology (CSIR-NEIST), Jorhat, 785006 Assam India
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, 201 002 Uttar Pradesh India
| | - Kallare P. Arunkumar
- Central Muga Eri Research and Training Institute (CMER&TI), Lahdoigarh, Jorhat, 785006 Assam India
| | - Channakeshavaiah Chikkaputtaiah
- Biological Sciences and Technology Division, CSIR-North East Institute of Science and Technology (CSIR-NEIST), Jorhat, 785006 Assam India
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, 201 002 Uttar Pradesh India
- Biological Sciences and Technology Division, CSIR-North East Institute of Science and Technology (CSIR-NEIST), Jorhat, 785006 Assam India
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13
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Hu S, Yin Y, Chen B, Lin Q, Tian Y, Song X, Peng J, Zheng H, Rao S, Wu G, Mo X, Yan F, Chen J, Lu Y. Identification of viral particles in the apoplast of Nicotiana benthamiana leaves infected by potato virus X. MOLECULAR PLANT PATHOLOGY 2021; 22:456-464. [PMID: 33629491 PMCID: PMC7938632 DOI: 10.1111/mpp.13039] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/17/2020] [Revised: 01/19/2021] [Accepted: 01/25/2021] [Indexed: 05/21/2023]
Abstract
The apoplast is the extracellular space for signalling, nutrient transport, and plant-microbe interactions, but little is known about how plant viruses use the foliar apoplast. Proteomic analysis of the apoplasts isolated from potato virus X (PVX)-infected Nicotiana benthamiana plants showed that the coat protein (CP) is the dominant viral component. The presence of the CP in the apoplast was confirmed by western blot, viral nucleic acid was detected by reverse transcription-PCR and northern blot, and viral particles were observed by transmission electron microscopy (TEM). The apoplast from infected leaves was infectious if rubbed onto healthy leaves but not when infiltrated into them. The exosomes were separated from the apoplast fluid by high-speed centrifugation and TEM showed that PVX particles were not associated with the exosomes. These results suggest that PVX virions are released to the N. benthamiana apoplast in a one-way manner and do not share the bidirectional transport of exosomes.
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Affiliation(s)
- Shuzhen Hu
- College of Plant ProtectionNanjing Agriculture UniversityNanjingChina
- State Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agro‐productsInstitute of Plant VirologyNingbo UniversityNingboChina
| | - Yueyan Yin
- State Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agro‐productsInstitute of Plant VirologyNingbo UniversityNingboChina
| | - Buyang Chen
- State Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agro‐productsInstitute of Plant VirologyNingbo UniversityNingboChina
| | - Qi Lin
- State Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agro‐productsInstitute of Plant VirologyNingbo UniversityNingboChina
| | - Yanzhen Tian
- State Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agro‐productsInstitute of Plant VirologyNingbo UniversityNingboChina
| | - Xijiao Song
- Central Laboratory of Zhejiang Academy of Agricultural SciencesHangzhouChina
| | - Jiejun Peng
- State Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agro‐productsInstitute of Plant VirologyNingbo UniversityNingboChina
| | - Hongying Zheng
- State Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agro‐productsInstitute of Plant VirologyNingbo UniversityNingboChina
| | - Shaofei Rao
- State Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agro‐productsInstitute of Plant VirologyNingbo UniversityNingboChina
| | - Guanwei Wu
- State Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agro‐productsInstitute of Plant VirologyNingbo UniversityNingboChina
| | - Xiaohan Mo
- Yunnan Academy of Tobacco Agricultural SciencesKunmingChina
| | - Fei Yan
- State Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agro‐productsInstitute of Plant VirologyNingbo UniversityNingboChina
| | - Jianping Chen
- College of Plant ProtectionNanjing Agriculture UniversityNanjingChina
- State Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agro‐productsInstitute of Plant VirologyNingbo UniversityNingboChina
| | - Yuwen Lu
- State Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agro‐productsInstitute of Plant VirologyNingbo UniversityNingboChina
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14
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Chen X, Li Y, Jiang L, Hu B, Wang L, An S, Zhang X. Uptake, accumulation, and translocation mechanisms of steroid estrogens in plants. THE SCIENCE OF THE TOTAL ENVIRONMENT 2021; 753:141979. [PMID: 32890876 DOI: 10.1016/j.scitotenv.2020.141979] [Citation(s) in RCA: 19] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/30/2020] [Revised: 08/23/2020] [Accepted: 08/23/2020] [Indexed: 06/11/2023]
Abstract
Applying sewage sludge or animal manure onto agricultural land can result in estrogen pollution, which increases the risk of human exposure to steroid estrogens (SEs) via the food chain. However, the uptake and accumulation mechanism of SEs by plants is still unclear. In this study, the uptake, accumulation, and translocation of 17β-E2, a representative SE, were investigated through a series of wheat hydroponic experiments. Various inhibitors were applied to explore the uptake pathways of 17β-E2 by wheat. In addition, the effects of exposure concentrations, coexisting 17α-ethynylestradiol (EE2) and plant properties on the uptake of 17β-E2 were examined. The results indicated that the accumulation of 17β-E2 in wheat roots mainly resulted from adsorption and active uptake that involved aquaporins and anion channels transport. The chlorophyll and protein contents of plants were positively correlated with the uptake of 17β-E2, whereas competitive inhibition occurred when 17β-E2 and EE2 coexisted in the same solution. Nevertheless, the results of a split-root experiment showed that 17β-E2 absorbed by wheat could further migrate in plant via long-distance transport and ultimately was discharged from plants, suggesting that 17β-E2 was still at risk of being released even though it had been absorbed by plants. These results could provide valuable insights into the risk assessment and risk control of the uptake of SEs by plants.
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Affiliation(s)
- Xingcai Chen
- State Key Laboratory of Water Environment Simulation, School of Environment, Beijing Normal University, 100875 Beijing, China
| | - Yanxia Li
- State Key Laboratory of Water Environment Simulation, School of Environment, Beijing Normal University, 100875 Beijing, China.
| | - Linshu Jiang
- Beijing University of Agriculture, Beijing 102206, China
| | - Baiyang Hu
- State Key Laboratory of Water Environment Simulation, School of Environment, Beijing Normal University, 100875 Beijing, China
| | - Lin Wang
- State Key Laboratory of Water Environment Simulation, School of Environment, Beijing Normal University, 100875 Beijing, China
| | - Siyu An
- State Key Laboratory of Water Environment Simulation, School of Environment, Beijing Normal University, 100875 Beijing, China
| | - Xuelian Zhang
- Beijing Soil and Fertilizer Extension Service Station, Beijing 100029, China
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15
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Inui H, Katte N, Goto J, Iwabuchi A. High temperatures promote the uptake of hydrophobic pollutants by Cucurbita pepo via altered gene expression levels of major latex-like proteins. JOURNAL OF PESTICIDE SCIENCE 2020; 45:75-80. [PMID: 32508513 PMCID: PMC7251200 DOI: 10.1584/jpestics.d19-065] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/07/2019] [Accepted: 12/28/2019] [Indexed: 05/30/2023]
Abstract
Cucurbitaceae family members are accumulators of hydrophobic pollutants. Such pollutants have been detected in cucurbits at levels above the maximum residue limit. Since major latex-like proteins (MLPs) are involved in hydrophobic pollutant uptake, changes in MLP expression can increase or decrease contamination. MLP expression levels were altered in the roots of Cucurbita pepo 'Magda,' and MLP-PG1 was detected in the xylem sap of Magda when cultivated at a high temperature (35°C). Day length also influenced MLP expression levels but only induced minor changes in the amount of MLPs. The concentration of pyrene, a hydrophobic pollutant, significantly increased with increasing MLP levels in the xylem sap of Magda when cultivated at 35°C. Thus, high temperatures promote the pollution of cucurbits by hydrophobic pollutants. These results can be used to develop novel techniques to reduce crop contamination and establish efficient phytoremediation.
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Affiliation(s)
- Hideyuki Inui
- Biosignal Research Center, Kobe University, 1–1 Rokkodaicho, Nada-ku, Kobe, Hyogo 657–8501, Japan
- Graduate School of Agricultural Science, Kobe University, 1–1 Rokkodaicho, Nada-ku, Kobe, Hyogo 657–8501, Japan
| | - Nonoka Katte
- Faculty of Agriculture, Kobe University, 1–1 Rokkodaicho, Nada-ku, Kobe, Hyogo 657–8501, Japan
| | - Junya Goto
- Graduate School of Agricultural Science, Kobe University, 1–1 Rokkodaicho, Nada-ku, Kobe, Hyogo 657–8501, Japan
| | - Aya Iwabuchi
- Graduate School of Agricultural Science, Kobe University, 1–1 Rokkodaicho, Nada-ku, Kobe, Hyogo 657–8501, Japan
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16
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Cavitation in lipid bilayers poses strict negative pressure stability limit in biological liquids. Proc Natl Acad Sci U S A 2020; 117:10733-10739. [PMID: 32358185 DOI: 10.1073/pnas.1917195117] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022] Open
Abstract
Biological and technological processes that involve liquids under negative pressure are vulnerable to the formation of cavities. Maximal negative pressures found in plants are around -100 bar, even though cavitation in pure bulk water only occurs at much more negative pressures on the relevant timescales. Here, we investigate the influence of small solutes and lipid bilayers, both constituents of all biological liquids, on the formation of cavities under negative pressures. By combining molecular dynamics simulations with kinetic modeling, we quantify cavitation rates on biologically relevant length scales and timescales. We find that lipid bilayers, in contrast to small solutes, increase the rate of cavitation, which remains unproblematically low at the pressures found in most plants. Only when the negative pressures approach -100 bar does cavitation occur on biologically relevant timescales. Our results suggest that bilayer-based cavitation is what generally limits the magnitude of negative pressures in liquids that contain lipid bilayers.
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17
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Iwabuchi A, Katte N, Suwa M, Goto J, Inui H. Factors regulating the differential uptake of persistent organic pollutants in cucurbits and non-cucurbits. JOURNAL OF PLANT PHYSIOLOGY 2020; 245:153094. [PMID: 31862647 DOI: 10.1016/j.jplph.2019.153094] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/25/2019] [Revised: 11/08/2019] [Accepted: 12/03/2019] [Indexed: 06/10/2023]
Abstract
Contamination with persistent organic pollutants (POPs) has become a worldwide concern owing to their the toxicity to humans and wildlife. Pumpkin, cucumber, and squash (Cucurbitaceae) accumulate POPs in their shoots in concentrations higher than those in non-cucurbits; to elucidate the underlying molecular mechanisms of this accumulation, POP transporters were analyzed in the xylem sap of cucurbits and non-cucurbits. The 17-kDa xylem sap proteins detected in all cucurbits but not in non-cucurbits readily bound polychlorinated biphenyl (PCB) in all tested cucurbits, except in cucumber and loofah, and to dieldrin in all tested cucurbits. Ten genes encoding major latex-like proteins (MLPs) responsible for the accumulation of PCBs in zucchini plants were cloned from cucurbits. Phylogenetic analysis using MLP sequences identified two separate clades, one containing Cucurbitaceae MLPs and the other containing those of non-cucurbit members. Recombinant MLPs bound PCB and dieldrin. Western blotting with anti-MLP antibodies identified translocatable and non-translocatable MLPs between root and stem xylem vessels. Translocation of MLPs from the root to stem xylem vessels and POP-binding ability of MLPs are important for selective accumulation of MLPs in cucurbits. This study provides basic knowledge about phytoremediation through overexpression of MLP genes and for breeding cucurbits that accumulate less contaminants.
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Affiliation(s)
- Aya Iwabuchi
- Graduate School of Agricultural Science, Kobe University, 1-1 Rokkodaicho, Nada-ku, Kobe, Hyogo 657-8501, Japan
| | - Nonoka Katte
- Faculty of Agriculture, Kobe University, 1-1 Rokkodaicho, Nada-ku, Kobe, Hyogo 657-8501, Japan
| | - Mizuki Suwa
- Graduate School of Agricultural Science, Kobe University, 1-1 Rokkodaicho, Nada-ku, Kobe, Hyogo 657-8501, Japan
| | - Junya Goto
- Graduate School of Agricultural Science, Kobe University, 1-1 Rokkodaicho, Nada-ku, Kobe, Hyogo 657-8501, Japan
| | - Hideyuki Inui
- Graduate School of Agricultural Science, Kobe University, 1-1 Rokkodaicho, Nada-ku, Kobe, Hyogo 657-8501, Japan; Biosignal Research Center, Kobe University, 1-1 Rokkodaicho, Nada-ku, Kobe, Hyogo 657-8501, Japan.
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18
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Yang J, Wang X, Xie M, Wang G, Li Z, Zhang Y, Wu L, Zhang G, Ma Z. Proteomic analyses on xylem sap provides insights into the defense response of Gossypium hirsutum against Verticillium dahliae. J Proteomics 2019; 213:103599. [PMID: 31809902 DOI: 10.1016/j.jprot.2019.103599] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/15/2019] [Revised: 11/16/2019] [Accepted: 11/22/2019] [Indexed: 10/25/2022]
Abstract
Verticillium dahliae seriously affects the yield of cotton. Here, V. dahliae infection induced the significant reduction of protein concentration in cotton xylem sap (CXS), suggesting that the protein composition have changed. Thus, the proteomics in CXS from resistant Gossypium hirsutum cv. ND601 and susceptible CCRI8 infected by V. dahliae were analyzed using the label-free method. A total of 3047 proteins were identified across all four CXS sample groups. 1717 and 1476 proteins were differentially accumulated in ND601 and CCRI8 after infection with V. dahliae, respectively. The majority of up-accumulated and induced proteins belongs to pathogenesis-related proteins and associates with cell wall (CWRPs). Down-accumulated and disappeared proteins were principally related to plant growth and development. Differentially accumulated CWRPs from ND601 and CCRI8 in type and quantity were not entirely consistent with each other, leading to different cell wall dynamics and strength, which were partly proved by the measurement of stem mechanical strength. Most of proteins related to growth and development were down-accumulated in ND601 compared to CCRI8, suggesting that the resistant variety may transfer more energy for defense responses or reduce nutrient acquisition of V. dahliae for colonization more effectively than the susceptible. SIGNIFICANCE: Verticillium wilt, mainly caused by V. dahliae, is one of the most destructive diseases in cotton. V. dahliae usually penetrates the root epidermis, reaches vascular tissues, and eventually extends to the above-ground tissues along the xylem vessels. Obviously, xylem is an important battlefront for plant defense to V. dahliae. Therefore, we analyzed the proteome profiles of xylem saps from resistant and susceptible cotton cultivars. Our findings provide valuable insights into the molecular mechanism underlying the interaction between V. dahliae and cotton.
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Affiliation(s)
- Jun Yang
- North China Key Laboratory for Crop Germplasm Resources of Education Ministry, Hebei Agricultural University, Baoding 071001, China
| | - Xingfen Wang
- North China Key Laboratory for Crop Germplasm Resources of Education Ministry, Hebei Agricultural University, Baoding 071001, China
| | - Meixia Xie
- North China Key Laboratory for Crop Germplasm Resources of Education Ministry, Hebei Agricultural University, Baoding 071001, China
| | - Guoning Wang
- North China Key Laboratory for Crop Germplasm Resources of Education Ministry, Hebei Agricultural University, Baoding 071001, China
| | - Zhikun Li
- North China Key Laboratory for Crop Germplasm Resources of Education Ministry, Hebei Agricultural University, Baoding 071001, China
| | - Yan Zhang
- North China Key Laboratory for Crop Germplasm Resources of Education Ministry, Hebei Agricultural University, Baoding 071001, China
| | - Liqiang Wu
- North China Key Laboratory for Crop Germplasm Resources of Education Ministry, Hebei Agricultural University, Baoding 071001, China
| | - Guiyin Zhang
- North China Key Laboratory for Crop Germplasm Resources of Education Ministry, Hebei Agricultural University, Baoding 071001, China
| | - Zhiying Ma
- North China Key Laboratory for Crop Germplasm Resources of Education Ministry, Hebei Agricultural University, Baoding 071001, China.
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19
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Aohara T, Furukawa J, Miura K, Tsuda S, Poisson JS, Ben RN, Wilson PW, Satoh S. Presence of a basic secretory protein in xylem sap and shoots of poplar in winter and its physicochemical activities against winter environmental conditions. JOURNAL OF PLANT RESEARCH 2019; 132:655-665. [PMID: 31289959 DOI: 10.1007/s10265-019-01123-9] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/22/2019] [Accepted: 07/05/2019] [Indexed: 06/09/2023]
Abstract
XSP25, previously shown to be the most abundant hydrophilic protein in xylem sap of Populus nigra in winter, belongs to a secretory protein family in which the arrangement of basic and acidic amino acids is conserved between dicotyledonous and monocotyledonous species. Its gene expression was observed at the same level in roots and shoots under long-day conditions, but highly induced under short-day conditions and at low temperatures in roots, especially in endodermis and xylem parenchyma in the root hair region of Populus trichocarpa, and its protein level was high in dormant buds, but not in roots or branches. Addition of recombinant PtXSP25 protein mitigated the denaturation of lactate dehydrogenase by drying, but showed only a slight effect on that caused by freeze-thaw cycling. Recombinant PtXSP25 protein also showed ice recrystallization inhibition activity to reduce the size of ice crystals, but had no antifreezing activity. We suggest that PtXSP25 protein produced in shoots and/or in roots under short-day conditions and at non-freezing low temperatures followed by translocation via xylem sap to shoot apoplast may protect the integrity of the plasma membrane and cell wall functions from freezing and drying damage in winter environmental conditions.
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Affiliation(s)
- Tsutomu Aohara
- Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki, 305-8572, Japan
| | - Jun Furukawa
- Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki, 305-8572, Japan
| | - Kenji Miura
- Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki, 305-8572, Japan
| | - Sakae Tsuda
- Bioproduction Research Institute, National Institute of Advanced Industrial Science and Technology (AIST), 2-17-2-1 Tsukisamu-Higashi, Toyohira, Sapporo, 062-8517, Japan
| | - Jessica S Poisson
- Department of Chemistry and Biomolecular Sciences, University of Ottawa, D'Iorio Hall, 10 Marie Curie, Ottawa, ON, K1N 6N5, Canada
| | - Robert N Ben
- Department of Chemistry and Biomolecular Sciences, University of Ottawa, D'Iorio Hall, 10 Marie Curie, Ottawa, ON, K1N 6N5, Canada
| | - Peter W Wilson
- School of Environment, Science and Engineering, Southern Cross University, Lismore, NSW, 2480, Australia
| | - Shinobu Satoh
- Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki, 305-8572, Japan.
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20
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Luo JS, Zhang Z. Proteomic changes in the xylem sap of Brassica napus under cadmium stress and functional validation. BMC PLANT BIOLOGY 2019; 19:280. [PMID: 31242871 PMCID: PMC6595625 DOI: 10.1186/s12870-019-1895-7] [Citation(s) in RCA: 29] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/19/2018] [Accepted: 06/19/2019] [Indexed: 05/19/2023]
Abstract
BACKGROUND The xylem sap of vascular plants primarily transports water and mineral nutrients from the roots to the shoots and also transports heavy metals such as cadmium (Cd). Proteomic changes in xylem sap is an important mechanism for detoxifying Cd by plants. However, it is unclear how proteins in xylem sap respond to Cd. Here, we investigated the effects of Cd stress on the xylem sap proteome of Brassica napus using a label-free shotgun proteomic approach to elucidate plant response mechanisms to Cd toxicity. RESULTS We identified and quantified 672 proteins; 67% were predicted to be secretory, and 11% (73 proteins) were unique to Cd-treated samples. Cd stress caused statistically significant and biologically relevant abundance changes in 28 xylem sap proteins. Among these proteins, the metabolic pathways that were most affected were related to cell wall modifications, stress/oxidoreductases, and lipid and protein metabolism. We functionally validated a plant defensin-like protein, BnPDFL, which belongs to the stress/oxidoreductase category, that was unique to the Cd-treated samples and played a positive role in Cd tolerance. Subcellular localization analysis revealed that BnPDFL is cell wall-localized. In vitro Cd-binding assays revealed that BnPDFL has Cd-chelating activity. BnPDFL heterologous overexpression significantly enhanced Cd tolerance in E. coli and Arabidopsis. Functional disruption of Arabidopsis plant defensin genes AtPDF2.3 and AtPDF2.2, which are mainly expressed in root vascular bundles, significantly decreased Cd tolerance. CONCLUSIONS Several xylem sap proteins in Brassica napus are differentially induced in response to Cd treatment, and plant defensin plays a positive role in Cd tolerance.
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Affiliation(s)
- Jin-Song Luo
- Southern Regional Collaborative Innovation Center for Grain and Oil Crops in China, College of Resources and Environmental Sciences, Hunan Agricultural University, Changsha, China
- Hunan Provincial Key Laboratory of Farmland Pollution Control and Agricultural Resources Use, National Engineering Laboratory on Soil and Fertilizer Resources Efficient Utilization, Hunan Provincial Key Laboratory of Nutrition in Common University, Changsha, 410128 China
| | - Zhenhua Zhang
- Southern Regional Collaborative Innovation Center for Grain and Oil Crops in China, College of Resources and Environmental Sciences, Hunan Agricultural University, Changsha, China
- Hunan Provincial Key Laboratory of Farmland Pollution Control and Agricultural Resources Use, National Engineering Laboratory on Soil and Fertilizer Resources Efficient Utilization, Hunan Provincial Key Laboratory of Nutrition in Common University, Changsha, 410128 China
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Liu Q, Wang X, Yang R, Yang L, Sun B, Zhu L. Uptake Kinetics, Accumulation, and Long-Distance Transport of Organophosphate Esters in Plants: Impacts of Chemical and Plant Properties. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2019; 53:4940-4947. [PMID: 30942573 DOI: 10.1021/acs.est.8b07189] [Citation(s) in RCA: 79] [Impact Index Per Article: 15.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
The uptake, accumulation, and long-distance transport of organophosphate esters (OPEs) in four kinds of plants were investigated by hydroponic experiments. The uptake kinetics ( k1,root) of OPEs in plant roots were determined by the binding of OPEs with the proteins in plant roots and apoplastic sap for the hydrophobic compounds, which correlated well with the transpiration capacity of the plants for the hydrophilic compounds. However, the accumulation capacity of OPEs in plant root was controlled by the partition of OPEs to plant lipids. As a consequence, OPEs were taken up the fastest in wheat root as a result of its highest protein content but least accumulated as a result of its lowest lipid content. The translocation factor of the OPEs decreased quickly with the hydrophobicity (log Kow) increasing, suggesting that the hydrophobic OPEs were hard to translocate from roots to shoots. The hydrophilic OPEs, such as tris(2-chloroisopropyl) phosphate and tris(2-butoxyethyl) phosphate, were ambimobile in the plant xylem and phloem, suggesting that they could move to the edible parts of plants and enhanced risk to human health.
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Affiliation(s)
- Qing Liu
- Key Laboratory of Pollution Processes and Environmental Criteria (Ministry of Education), Tianjin Key Laboratory of Environmental Remediation and Pollution Control, College of Environmental Science and Engineering , Nankai University , Tianjin 300350 , People's Republic of China
| | - Xiaolei Wang
- Key Laboratory of Pollution Processes and Environmental Criteria (Ministry of Education), Tianjin Key Laboratory of Environmental Remediation and Pollution Control, College of Environmental Science and Engineering , Nankai University , Tianjin 300350 , People's Republic of China
| | - Rongyan Yang
- Key Laboratory of Pollution Processes and Environmental Criteria (Ministry of Education), Tianjin Key Laboratory of Environmental Remediation and Pollution Control, College of Environmental Science and Engineering , Nankai University , Tianjin 300350 , People's Republic of China
| | - Liping Yang
- Key Laboratory of Pollution Processes and Environmental Criteria (Ministry of Education), Tianjin Key Laboratory of Environmental Remediation and Pollution Control, College of Environmental Science and Engineering , Nankai University , Tianjin 300350 , People's Republic of China
| | - Binbin Sun
- Key Laboratory of Pollution Processes and Environmental Criteria (Ministry of Education), Tianjin Key Laboratory of Environmental Remediation and Pollution Control, College of Environmental Science and Engineering , Nankai University , Tianjin 300350 , People's Republic of China
| | - Lingyan Zhu
- Key Laboratory of Pollution Processes and Environmental Criteria (Ministry of Education), Tianjin Key Laboratory of Environmental Remediation and Pollution Control, College of Environmental Science and Engineering , Nankai University , Tianjin 300350 , People's Republic of China
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22
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Diab AA, Cao XQ, Chen H, Song K, Zhou L, Chen B, He YW. BDSF Is the Predominant In-Planta Quorum-Sensing Signal Used During Xanthomonas campestris Infection and Pathogenesis in Chinese Cabbage. MOLECULAR PLANT-MICROBE INTERACTIONS : MPMI 2019; 32:240-254. [PMID: 30570452 DOI: 10.1094/mpmi-07-18-0197-r] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
Xanthomonas campestris pv. campestris uses the diffusible signal factor (DSF) family of quorum-sensing (QS) signals to coordinate virulence and adaptation. DSF family signals have been well-characterized using laboratory-based cell cultures. The in-planta QS signal used during X. campestris pv. campestris infection remains unclear. To achieve this goal, we first mimic in-planta X. campestris pv. campestris growth conditions by supplementing the previously developed XYS medium with cabbage hydrolysate and found that the dominant signal produced in these conditions was BDSF. Secondly, by using XYS medium supplemented with diverse plant-derived compounds, we examined the effects of diverse plant-derived compounds on the biosynthesis of DSF family signals. Several compounds were found to promote biosynthesis of BDSF. Finally, using an X. campestris pv. campestris ΔrpfB-Chinese cabbage infection model and an ultra-performance liquid chromatographic-time of flight-mass spectrometry-based assay, BDSF was found to comprise >70% of the DSF family signals present in infected cabbage tissue. BDSF at a concentration of 2.0 μM induced both protease activity and engXCA expression. This is the first report to directly show that BDSF is the predominant in-planta QS signal used during X. campestris pv. campestris infection. It provides a better understanding of the molecular interactions between X. campestris pv. campestris and its cruciferous hosts and also provides the logical target for designing strategies to counteract BDSF signaling and, thus, infection. Further studies are needed to get an exact idea about the DSF production dynamics of the wild-type strain inside the plant.
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Affiliation(s)
- Abdelgader Abdeen Diab
- 1 State Key Laboratory of Microbial Metabolism, Joint International Research Laboratory of Metabolic & Developmental Sciences, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai 200240, China; and
| | - Xue-Qiang Cao
- 1 State Key Laboratory of Microbial Metabolism, Joint International Research Laboratory of Metabolic & Developmental Sciences, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai 200240, China; and
| | - Hui Chen
- 1 State Key Laboratory of Microbial Metabolism, Joint International Research Laboratory of Metabolic & Developmental Sciences, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai 200240, China; and
| | - Kai Song
- 1 State Key Laboratory of Microbial Metabolism, Joint International Research Laboratory of Metabolic & Developmental Sciences, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai 200240, China; and
| | - Lian Zhou
- 2 Zhiyuan Innovation Research Centre, Student Innovation Centre, Zhiyuan College, Shanghai Jiao Tong University
| | - Bo Chen
- 1 State Key Laboratory of Microbial Metabolism, Joint International Research Laboratory of Metabolic & Developmental Sciences, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai 200240, China; and
| | - Ya-Wen He
- 1 State Key Laboratory of Microbial Metabolism, Joint International Research Laboratory of Metabolic & Developmental Sciences, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai 200240, China; and
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23
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Pullagurala VLR, Rawat S, Adisa IO, Hernandez-Viezcas JA, Peralta-Videa JR, Gardea-Torresdey JL. Plant uptake and translocation of contaminants of emerging concern in soil. THE SCIENCE OF THE TOTAL ENVIRONMENT 2018; 636:1585-1596. [PMID: 29913619 DOI: 10.1016/j.scitotenv.2018.04.375] [Citation(s) in RCA: 104] [Impact Index Per Article: 17.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/20/2018] [Revised: 04/26/2018] [Accepted: 04/27/2018] [Indexed: 05/28/2023]
Abstract
The advent of industrialization has led to the discovery of a wide range of chemicals designed for multiple uses including plant protection. However, after use, most of the chemicals and their derivatives end up in soil and water, interacting with living organisms. Plants, which are primary producers, are intentionally or unintentionally exposed to several chemicals, serving as a vehicle for the transfer of products into the food chain. Although the exposure of pesticides towards plants has been witnessed over a long time in agricultural production, other chemicals have attracted attention very recently. In this review, we carried out a comprehensive overview of the plant uptake capacity of various contaminants of emerging concern (CEC) in soil, such as pesticides, polycyclic aromatic hydrocarbons, perfluorinated compounds, pharmaceutical and personal care products, and engineered nanomaterials. The uptake pathways and overall impacts of these chemicals are highlighted. According to the literature, bioaccumulation of CEC in the root part is higher than in aerial parts. Furthermore, various factors such as plant species, pollutant type, and microbial interactions influence the overall uptake. Lastly, environmental factors such as soil erosion and temperature can also affect the CEC bioavailability towards plants.
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Affiliation(s)
- Venkata L Reddy Pullagurala
- Environmental Science and Engineering PhD Program, The University of Texas at El Paso, 500 West Univ. Ave., El Paso, TX 79968, USA; University of California Center for Environmental Implications of Nanotechnology (UC CEIN), The University of Texas at El Paso, 500 West Univ. Ave., El Paso, TX 79968, USA
| | - Swati Rawat
- Environmental Science and Engineering PhD Program, The University of Texas at El Paso, 500 West Univ. Ave., El Paso, TX 79968, USA; University of California Center for Environmental Implications of Nanotechnology (UC CEIN), The University of Texas at El Paso, 500 West Univ. Ave., El Paso, TX 79968, USA
| | - Ishaq O Adisa
- Environmental Science and Engineering PhD Program, The University of Texas at El Paso, 500 West Univ. Ave., El Paso, TX 79968, USA; The Center for Nanotechnology and Agricultural Pathogen Suppression (CeNAPS), The University of Texas at El Paso, 500 West Univ. Ave., El Paso, TX 79968, USA
| | - Jose A Hernandez-Viezcas
- Department of Chemistry and Biochemistry, The University of Texas at El Paso, 500 West Univ. Ave., El Paso, TX 79968, USA; University of California Center for Environmental Implications of Nanotechnology (UC CEIN), The University of Texas at El Paso, 500 West Univ. Ave., El Paso, TX 79968, USA
| | - Jose R Peralta-Videa
- Environmental Science and Engineering PhD Program, The University of Texas at El Paso, 500 West Univ. Ave., El Paso, TX 79968, USA; Department of Chemistry and Biochemistry, The University of Texas at El Paso, 500 West Univ. Ave., El Paso, TX 79968, USA; University of California Center for Environmental Implications of Nanotechnology (UC CEIN), The University of Texas at El Paso, 500 West Univ. Ave., El Paso, TX 79968, USA
| | - Jorge L Gardea-Torresdey
- Environmental Science and Engineering PhD Program, The University of Texas at El Paso, 500 West Univ. Ave., El Paso, TX 79968, USA; Department of Chemistry and Biochemistry, The University of Texas at El Paso, 500 West Univ. Ave., El Paso, TX 79968, USA; University of California Center for Environmental Implications of Nanotechnology (UC CEIN), The University of Texas at El Paso, 500 West Univ. Ave., El Paso, TX 79968, USA; The Center for Nanotechnology and Agricultural Pathogen Suppression (CeNAPS), The University of Texas at El Paso, 500 West Univ. Ave., El Paso, TX 79968, USA.
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24
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Ceballos-Laita L, Gutierrez-Carbonell E, Takahashi D, Abadía A, Uemura M, Abadía J, López-Millán AF. Effects of Fe and Mn deficiencies on the protein profiles of tomato (Solanum lycopersicum) xylem sap as revealed by shotgun analyses. J Proteomics 2017; 170:117-129. [PMID: 28847647 DOI: 10.1016/j.jprot.2017.08.018] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/05/2017] [Revised: 08/19/2017] [Accepted: 08/24/2017] [Indexed: 12/20/2022]
Abstract
The aim of this work was to study the effects of Fe and Mn deficiencies on the xylem sap proteome of tomato using a shotgun proteomic approach, with the final goal of elucidating plant response mechanisms to these stresses. This approach yielded 643 proteins reliably identified and quantified with 70% of them predicted as secretory. Iron and Mn deficiencies caused statistically significant and biologically relevant abundance changes in 119 and 118 xylem sap proteins, respectively. In both deficiencies, metabolic pathways most affected were protein metabolism, stress/oxidoreductases and cell wall modifications. First, results suggest that Fe deficiency elicited more stress responses than Mn deficiency, based on the changes in oxidative and proteolytic enzymes. Second, both nutrient deficiencies affect the secondary cell wall metabolism, with changes in Fe deficiency occurring via peroxidase activity, and in Mn deficiency involving peroxidase, Cu-oxidase and fasciclin-like arabinogalactan proteins. Third, the primary cell wall metabolism was affected by both nutrient deficiencies, with changes following opposite directions as judged from the abundances of several glycoside-hydrolases with endo-glycolytic activities and pectin esterases. Fourth, signaling pathways via xylem involving CLE and/or lipids as well as changes in phosphorylation and N-glycosylation also play a role in the responses to these stresses. Biological significance In spite of being essential for the delivery of nutrients to the shoots, our knowledge of xylem responses to nutrient deficiencies is very limited. The present work applies a shotgun proteomic approach to unravel the effects of Fe and Mn deficiencies on the xylem sap proteome. Overall, Fe deficiency seems to elicit more stress in the xylem sap proteome than Mn deficiency, based on the changes measured in proteolytic and oxido-reductase proteins, whereas both nutrients exert modifications in the composition of the primary and secondary cell wall. Cell wall modifications could affect the mechanical and permeability properties of the xylem sap vessels, and therefore ultimately affect solute transport and distribution to the leaves. Results also suggest that signaling cascades involving lipid and peptides might play a role in nutrient stress signaling and pinpoint interesting candidates for future studies. Finally, both nutrient deficiencies seem to affect phosphorylation and glycosylation processes, again following an opposite pattern.
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Affiliation(s)
- Laura Ceballos-Laita
- Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain
| | - Elain Gutierrez-Carbonell
- Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain
| | - Daisuke Takahashi
- United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan; Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan
| | - Anunciación Abadía
- Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain
| | - Matsuo Uemura
- United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan; Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan
| | - Javier Abadía
- Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain
| | - Ana Flor López-Millán
- USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.
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25
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Zhou L, Zhang LH, Cámara M, He YW. The DSF Family of Quorum Sensing Signals: Diversity, Biosynthesis, and Turnover. Trends Microbiol 2017; 25:293-303. [DOI: 10.1016/j.tim.2016.11.013] [Citation(s) in RCA: 105] [Impact Index Per Article: 15.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/20/2016] [Revised: 11/09/2016] [Accepted: 11/22/2016] [Indexed: 01/18/2023]
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26
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Baral B, Teixeira da Silva JA, Izaguirre-Mayoral ML. Early signaling, synthesis, transport and metabolism of ureides. JOURNAL OF PLANT PHYSIOLOGY 2016; 193:97-109. [PMID: 26967003 DOI: 10.1016/j.jplph.2016.01.013] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/13/2015] [Revised: 12/04/2015] [Accepted: 01/11/2016] [Indexed: 05/26/2023]
Abstract
The symbiosis between α nitrogen (N2)-fixing Proteobacteria (family Rhizobiaceae) and legumes belonging to the Fabaceae (a single phylogenetic group comprising three subfamilies: Caesalpinioideae, Mimosoideae and Papilionoideae) results in the formation of a novel root structure called a nodule, where atmospheric N2 is fixed into NH3(+). In the determinate type of nodules harbored by Rhizobium-nodulated Fabaceae species, newly synthesized NH3(+) is finally converted into allantoin (C4H6N4O3) and allantoic acid (C4H8N4O4) (ureides) through complex pathways involving at least 20 different enzymes that act synchronously in two types of nodule cells with contrasting ultrastructure, including the tree nodule cell organelles. Newly synthesized ureides are loaded into the network of nodule-root xylem vessels and transported to aerial organs by the transpirational water current. Once inside the leaves, ureides undergo an enzymatically driven reverse process to yield NH4(+) that is used for growth. This supports the role of ureides as key nitrogen (N)-compounds for the growth and yield of legumes nodulated by Rhizobium that grow in soils with a low N content. Thus, a concrete understanding of the mechanisms underlying ureide biogenesis and catabolism in legumes may help agrobiologists to achieve greater agricultural discoveries. In this review we focus on the transmembranal and transorganellar symplastic and apoplastic movement of N-precursors within the nodules, as well as on the occurrence, localization and properties of enzymes and genes involved in the biogenesis and catabolism of ureides. The synthesis and transport of ureides are not unique events in Rhizobium-nodulated N2-fixing legumes. Thus, a brief description of the synthesis and catabolism of ureides in non-legumes was included for comparison. The establishment of the symbiosis, nodule organogenesis and the plant's control of nodule number, synthesis and translocation of ureides via feed-back inhibition mechanisms are also reviewed.
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Affiliation(s)
- Bikash Baral
- Faculty of Agriculture and Forestry, University of Helsinki, P.O. Box 27, Latokartanonkaari 7, FIN-00014 Helsinki, Finland.
| | | | - Maria Luisa Izaguirre-Mayoral
- Biological Nitrogen Fixation Laboratory, Chemistry Department, Faculty of Science, Tshwane University of Technology, Private Bag X680, Pretoria 0001, South Africa.
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27
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Miller EL, Nason SL, Karthikeyan KG, Pedersen JA. Root Uptake of Pharmaceuticals and Personal Care Product Ingredients. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2016; 50:525-41. [PMID: 26619126 DOI: 10.1021/acs.est.5b01546] [Citation(s) in RCA: 266] [Impact Index Per Article: 33.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/12/2023]
Abstract
Crops irrigated with reclaimed wastewater or grown in biosolids-amended soils may take up pharmaceuticals and personal care product ingredients (PPCPs) through their roots. The uptake pathways followed by PPCPs and the propensity for these compounds to bioaccumulate in food crops are still not well understood. In this critical review, we discuss processes expected to influence root uptake of PPCPs, evaluate current literature on uptake of PPCPs, assess models for predicting plant uptake of these compounds, and provide recommendations for future research, highlighting processes warranting study that hold promise for improving mechanistic understanding of plant uptake of PPCPs. We find that many processes that are expected to influence PPCP uptake and accumulation have received little study, particularly rhizosphere interactions, in planta transformations, and physicochemical properties beyond lipophilicity (as measured by Kow). Data gaps and discrepancies in methodology and reporting have so far hindered development of models that accurately predict plant uptake of PPCPs. Topics warranting investigation in future research include the influence of rhizosphere processes on uptake, determining mechanisms of uptake and accumulation, in planta transformations, the effects of PPCPs on plants, and the development of predictive models.
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Affiliation(s)
- Elizabeth L Miller
- Molecular and Environmental Toxicology Center, ‡Environmental Chemistry and Technology Program, University of Wisconsin , Madison, Wisconsin 53706, United States
| | - Sara L Nason
- Molecular and Environmental Toxicology Center, ‡Environmental Chemistry and Technology Program, University of Wisconsin , Madison, Wisconsin 53706, United States
| | - K G Karthikeyan
- Molecular and Environmental Toxicology Center, ‡Environmental Chemistry and Technology Program, University of Wisconsin , Madison, Wisconsin 53706, United States
| | - Joel A Pedersen
- Molecular and Environmental Toxicology Center, ‡Environmental Chemistry and Technology Program, University of Wisconsin , Madison, Wisconsin 53706, United States
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28
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Schmitt M, Watanabe T, Jansen S. The effects of aluminium on plant growth in a temperate and deciduous aluminium accumulating species. AOB PLANTS 2016; 8:plw065. [PMID: 27613876 PMCID: PMC5091896 DOI: 10.1093/aobpla/plw065] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/12/2016] [Accepted: 08/16/2016] [Indexed: 05/11/2023]
Abstract
Aluminium (Al) is a phytotoxic element affecting the growth and yield of many crop plants, especially in the tropics. Yet, some plants are able to accumulate high levels of Al. The monogeneric family Symplocaceae represents an Al accumulating family including many tropical and evergreen species with high Al levels in their above ground plant tissues. It is unclear, however, whether Al accumulation also characterises temperate species of Symplocos, and whether or not the uptake has a beneficial growth effect. Here, we investigate if the temperate, deciduous species Symplocos paniculata is able to accumulate Al by growing seedlings and saplings in a hydroponic setup at pH 4 with and without Al. Pyrocatechol-violet (PCV) and aluminon staining was performed to visualize Al accumulation in various plant tissues. Both seedlings and saplings accumulate Al in their tissues if available. Mean Al levels in leaves were 4107 (±1474 mg kg-1) and 4290 (±4025 mg kg-1) for the seedlings and saplings, respectively. The saplings treated without Al showed a high mortality rate unlike the Al accumulating ones. The seedlings, however, showed no difference in growth and vitality between the two treatments. The saplings treated with Al showed new twig, leaf and root development, resulting in a considerable biomass increase. PCV and aluminon staining indicated the presence of Al in leaf, wood and bark tissue of the plants. S. paniculata shares the capacity to accumulate Al with its tropical sister species and is suggested to be a facultative accumulator. Whether or not Al has a beneficial effect remains unclear, due to developmental differences between seedlings and saplings. Al is suggested to be transported via the xylem transport system into the leaves, which show the highest Al levels. Radial transport via ray parenchyma to bark tissue is also likely given the high Al concentrations in the bark tissue.
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Affiliation(s)
- Marco Schmitt
- Institute of Systematic Botany and Ecology, Ulm University, Albert-Einstein-Allee 11, 89081 Ulm, Germany
| | - Toshihiro Watanabe
- Research Faculty of Agriculture, Hokkaido University, Kita-9, Nishi-9, Kitaku, 060-8589 Sapporo, Japan
| | - Steven Jansen
- Institute of Systematic Botany and Ecology, Ulm University, Albert-Einstein-Allee 11, 89081 Ulm, Germany
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29
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Zhou L, Yu Y, Chen X, Diab AA, Ruan L, He J, Wang H, He YW. The Multiple DSF-family QS Signals are Synthesized from Carbohydrate and Branched-chain Amino Acids via the FAS Elongation Cycle. Sci Rep 2015; 5:13294. [PMID: 26289160 PMCID: PMC4542539 DOI: 10.1038/srep13294] [Citation(s) in RCA: 61] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/10/2015] [Accepted: 07/21/2015] [Indexed: 12/29/2022] Open
Abstract
Members of the diffusible signal factor (DSF) family are a novel class of quorum sensing (QS) signals in diverse Gram-negative bacteria. Although previous studies have identified RpfF as a key enzyme for the biosynthesis of DSF family signals, many questions in their biosynthesis remain to be addressed. In this study with the phytopathogen Xanthomonas campestris pv. campestris (Xcc), we show that Xcc produces four DSF-family signals (DSF, BDSF, CDSF and IDSF) during cell culture, and that IDSF is a new functional signal characterized as cis-10-methyl-2-dodecenoic acid. Using a range of defined media, we further demonstrate that Xcc mainly produces BDSF in the presence of carbohydrates; leucine and valine are the primary precursor for DSF biosynthesis; isoleucine is the primary precursor for IDSF biosynthesis. Furthermore, our biochemical analyses show that the key DSF synthase RpfF has both thioesterase and dehydratase activities, and uses 3-hydroxydedecanoyl-ACP as a substrate to produce BDSF. Finally, our results show that the classic fatty acid synthesis elongation cycle is required for the biosynthesis of DSF-family signals. Taken all together, these findings establish a general biosynthetic pathway for the DSF-family quorum sensing signals.
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Affiliation(s)
- Lian Zhou
- State Key Laboratory of Microbial Metabolism, School of Life Sciences &Biotechnology, Shanghai Jiao Tong University, Shanghai 200240, China
| | - Yonghong Yu
- College of Life Sciences, South China Agricultural University, Guangzhou 510650, China
| | - Xiping Chen
- State Key Laboratory of Agricultural Microbiology, College of Life Science and Technology, Huazhong Agricultural University, Wuhan, 430070, China
| | - Abdelgader Abdeen Diab
- State Key Laboratory of Microbial Metabolism, School of Life Sciences &Biotechnology, Shanghai Jiao Tong University, Shanghai 200240, China
| | - Lifang Ruan
- State Key Laboratory of Agricultural Microbiology, College of Life Science and Technology, Huazhong Agricultural University, Wuhan, 430070, China
| | - Jin He
- State Key Laboratory of Agricultural Microbiology, College of Life Science and Technology, Huazhong Agricultural University, Wuhan, 430070, China
| | - Haihong Wang
- College of Life Sciences, South China Agricultural University, Guangzhou 510650, China
| | - Ya-Wen He
- State Key Laboratory of Microbial Metabolism, School of Life Sciences &Biotechnology, Shanghai Jiao Tong University, Shanghai 200240, China
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30
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Garvin N, Doucette WJ, White JC. Investigating differences in the root to shoot transfer and xylem sap solubility of organic compounds between zucchini, squash and soybean using a pressure chamber method. CHEMOSPHERE 2015; 130:98-102. [PMID: 25537866 DOI: 10.1016/j.chemosphere.2014.11.075] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/19/2014] [Revised: 11/03/2014] [Accepted: 11/29/2014] [Indexed: 06/04/2023]
Abstract
A pressure chamber method was used to examine differences in the root to shoot transfer and xylem sap solubility of caffeine (log Kow=-0.07), triclocarban (log Kow=3.5-4.2) and endosulfan (log Kow=3.8-4.8) for zucchini (cucurbita pepo ssp pepo), squash (cucurbita pepo ssp ovifera), and soybean (glycine max L.). Transpiration stream concentration factors (TSCF) for caffeine (TSCF=0.8) were statistically equivalent for all plant species. However, for the more hydrophobic endosulfan and triclocarban, the TSCF values for zucchini (TSCF=0.6 and 0.4, respectively) were 3 and 10 times greater than the soybean and squash (TSCF=0.2 and 0.05, respectively). The difference in TSCF values was examined by comparing the measured solubilities of caffeine, endosulfan and triclocarban in deionized water to those in soybean and zucchini xylem saps using a modified shake flask method. The measured solubility of organic contaminants in xylem sap has not previously been reported. Caffeine solubilities in the xylem saps of soybean and zucchini were statistically equal to deionized water (21500mgL(-1)) while endosulfan and triclocarban solubilities in the zucchini xylem sap were significantly greater (0.43 and 0.21mgL(-1), respectively) than that of the soybean xylem sap (0.31 and 0.11mgL(-1), respectively) and deionized water (0.34 and 0.11mgL(-1), respectively). This suggests that the enhanced root to shoot transfer of hydrophobic organics reported for zucchini is partly due to increased solubility in the xylem sap. Further xylem sap characterization is needed to determine the mechanism of solubility enhancement.
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Affiliation(s)
- Naho Garvin
- Aqua Engineering, 533 W 2600 S Suite 275, Bountiful, UT 84010, USA.
| | - William J Doucette
- Utah Water Research Laboratory, Utah State University, 8200 Old Main Hill, Logan, UT 84322, USA.
| | - Jason C White
- Connecticut Agricultural Experiment Station, 123 Huntington Street, New Haven, CT 06504, USA.
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31
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Asahina M, Satoh S. Molecular and physiological mechanisms regulating tissue reunion in incised plant tissues. JOURNAL OF PLANT RESEARCH 2015; 128:381-8. [PMID: 25736731 DOI: 10.1007/s10265-015-0705-z] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/17/2014] [Accepted: 01/02/2015] [Indexed: 05/08/2023]
Abstract
Interactions among the functionally specialized organs of higher plants ensure that the plant body develops and functions properly in response to changing environmental conditions. When an incision or grafting procedure interrupts the original organ or tissue connection, cell division is induced and tissue reunion occurs to restore physiological connections. Such activities have long been observed in grafting techniques, which are advantageous not only for agriculture and horticulture but also for basic research. To understand how this healing process is controlled and how this process is initiated and regulated at the molecular level, physiological and molecular analyses of tissue reunion have been performed using incised hypocotyls of cucumber (Cucumis sativus) and tomato (Solanum lycopersicum) and incised flowering stems of Arabidopsis thaliana. Our results suggest that leaf gibberellin and microelements from the roots are required for tissue reunion in the cortex of the cucumber and tomato incised hypocotyls. In addition, the wound-inducible hormones ethylene and jasmonic acid contribute to the regulation of the tissue reunion process in the upper and lower parts, respectively, of incised Arabidopsis stems. Ethylene and jasmonic acid modulate the expression of ANAC071 and RAP2.6L, respectively, and auxin signaling via ARF6/8 is essential for the expression of these transcription factors. In this report, we discuss recent findings regarding molecular and physiological mechanisms of the graft union and the tissue reunion process in wounded tissues of plants.
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Affiliation(s)
- Masashi Asahina
- Department of Biosciences, Teikyo University, Utsunomiya, Tochigi, 320-8551, Japan,
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Xie X, Yoneyama K, Kisugi T, Nomura T, Akiyama K, Asami T, Yoneyama K. Strigolactones are transported from roots to shoots, although not through the xylem. JOURNAL OF PESTICIDE SCIENCE 2015. [PMID: 0 DOI: 10.1584/jpestics.d15-045] [Citation(s) in RCA: 35] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/08/2023]
Affiliation(s)
- Xiaonan Xie
- Center for Bioscience Research and Education, Utsunomiya University
| | - Kaori Yoneyama
- Center for Bioscience Research and Education, Utsunomiya University
| | - Takaya Kisugi
- Center for Bioscience Research and Education, Utsunomiya University
| | - Takahito Nomura
- Center for Bioscience Research and Education, Utsunomiya University
| | - Kohki Akiyama
- Department of Applied Life Sciences, Graduate School of Life and Environmental Sciences, Osaka Prefecture University
| | - Tadao Asami
- Graduate School of Agricultural and Life Sciences, The University of Tokyo
| | - Koichi Yoneyama
- Center for Bioscience Research and Education, Utsunomiya University
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Pitaksaringkarn W, Matsuoka K, Asahina M, Miura K, Sage-Ono K, Ono M, Yokoyama R, Nishitani K, Ishii T, Iwai H, Satoh S. XTH20 and XTH19 regulated by ANAC071 under auxin flow are involved in cell proliferation in incised Arabidopsis inflorescence stems. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2014; 80:604-14. [PMID: 25182467 DOI: 10.1111/tpj.12654] [Citation(s) in RCA: 54] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/16/2014] [Revised: 08/08/2014] [Accepted: 08/22/2014] [Indexed: 05/18/2023]
Abstract
One week after partial incision of Arabidopsis inflorescence stems, the repair process in damaged tissue includes pith cell proliferation. Auxin is a key factor driving this process, and ANAC071, a transcription factor gene, is upregulated in the distal region of the incised stem. Here we show that XTH20 and the closely related XTH19, members of xyloglucan endotransglucosylase/hydrolases family catalyzing molecular grafting and/or hydrolysis of cell wall xyloglucans, were also upregulated in the distal part of the incised stem, similar to ANAC071. XTH19 was expressed in the proximal incision region after 3 days or after auxin application to the decapitated stem. Horizontal positioning of the plant with the incised side up resulted in decreased ProDR 5 :GUS, ANAC071, XTH20, and XTH19 expression and reduced pith cell proliferation. In incised stems of Pro35S :ANAC071-SRDX plants, expression of XTH20 and XTH19 was substantially and moderately decreased, respectively. XTH20 and XTH19 expression and pith cell proliferation were suppressed in anac071 plants and were increased in Pro35S :ANAC071 plants. Pith cell proliferation was also inhibited in the xth20xth19 double mutant. Furthermore, ANAC071 bound to the XTH20 and XTH19 promoters to induce their expression. This study revealed XTH20 and XTH19 induction by auxin via ANAC071 in the distal part of an incised stem and their involvement in cell proliferation in the tissue reunion process.
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Affiliation(s)
- Weerasak Pitaksaringkarn
- Graduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba, 305-8572, Japan
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Zhang Z, Xin W, Wang S, Zhang X, Dai H, Sun R, Frazier T, Zhang B, Wang Q. Xylem sap in cotton contains proteins that contribute to environmental stress response and cell wall development. Funct Integr Genomics 2014; 15:17-26. [PMID: 25163431 DOI: 10.1007/s10142-014-0395-y] [Citation(s) in RCA: 30] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/17/2014] [Revised: 08/18/2014] [Accepted: 08/19/2014] [Indexed: 12/24/2022]
Abstract
The xylem sap of a plant is primarily responsible for transporting molecules from the underground root system to the aboveground parts of the plant body. In order to understand the role that roots play in cotton growth and development, the components present in xylem sap must be elucidated. In this study, we used a shotgun HPLC-ESI-MS/MS proteomics approach to identify 455 peptides from the xylem sap of field-grown cotton plants at peak blooming stage. Of these peptides, 384 (84.4%) were found to be secreted proteins and 320 (70.3%) had special molecular functions. Based on Gene Ontology (GO) analysis, 348 peptides were annotated in terms of molecular function, biological process, and cellular localization, with 46.9 and 45.1% being related to catalytic activity and binding activity, respectively. Many xylem sap-containing proteins were predicted to be involved in different phases of xylem differentiation including cell wall metabolism, secondary cell wall development and patterning, and programmed cell death. The identification of starch and sucrose hydrolyzing enzymes implicated the interaction between roots and aboveground parts on the aspect of carbohydrate metabolism. Many of the proteins identified in this study are involved in defense mechanisms including pathogen-related proteins, such as peroxidases, chitinases, and germin-like proteins, proteases involved in disease resistance, and phytoalexin phenylpropanoid synthesis-related proteins. The majority of identified signaling proteins were fasciclin-like arabinogalactan proteins and kinases. The results of this study provide useful insight into the communication mechanisms between cotton roots and the rest of the cotton plant.
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Affiliation(s)
- Zhiyong Zhang
- School of Life Science and Technology, Henan Institute of Science and Technology, Hualan Road, 453003, Xinxiang, China
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Petriccione M, Salzano AM, Di Cecco I, Scaloni A, Scortichini M. Proteomic analysis of the Actinidia deliciosa leaf apoplast during biotrophic colonization by Pseudomonas syringae pv. actinidiae. J Proteomics 2014; 101:43-62. [DOI: 10.1016/j.jprot.2014.01.030] [Citation(s) in RCA: 30] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/18/2013] [Revised: 01/20/2014] [Accepted: 01/29/2014] [Indexed: 11/25/2022]
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Bidadi H, Matsuoka K, Sage-Ono K, Fukushima J, Pitaksaringkarn W, Asahina M, Yamaguchi S, Sawa S, Fukuda H, Matsubayashi Y, Ono M, Satoh S. CLE6 expression recovers gibberellin deficiency to promote shoot growth in Arabidopsis. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2014; 78:241-52. [PMID: 24528333 DOI: 10.1111/tpj.12475] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/28/2013] [Revised: 12/18/2013] [Accepted: 01/27/2014] [Indexed: 05/23/2023]
Abstract
Small peptides act as local signals during plant development, but few studies have examined their interaction with phytohormone signaling. Here, we show that application of gibberellin (GA) to Arabidopsis shoots induces substantial accumulation of transcripts encoded by CLE6, a member of the CLAVATA/ESR-RELATED (CLE) gene family, in the root stele, followed by promotion of organ growth by CLE6 in GA-deficient plants. The long-distance effect of GA4 was demonstrated by the observation that its application to the shoot apex of the GA-deficient mutant ga3ox1/ga3ox2 rescued the short-root phenotype. Microarray analysis was used to identify root-expressed genes that respond to systemic application of GA, and CLE6 was selected for further analysis. CLE6 was highly expressed in roots at the young seedling stage, and CLE6 promoter activity was strong in hypocotyls and roots, especially in root stele cells at branch points. Application of CLE6 peptide had no obvious effect on the growth and development of GA-deficient mutant plants. Nonetheless, the fact that ectopic over-expression of CLE6 in the GA-deficient mutant promoted root growth and branching, petiole elongation, bolting rate and stem length showed that CLE6 expression partially compensates for the GA deficiency. Reciprocal grafting of GA-deficient mutant plants to 35S::CLE6 transformants complemented the shoot phenotype associated with GA deficiency, demonstrating the systemic effect of CLE6 from root to shoot. These data suggest that root-expressed CLE6 is systemically involved in shoot growth under GA action in Arabidopsis.
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Affiliation(s)
- Haniyeh Bidadi
- Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki, 305-8572, Japan
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Abstract
Proteomic analysis of xylem sap has recently become a major field of interest to understand several biological questions related to plant development and responses to environmental clues. The xylem sap appears as a dynamic fluid undergoing changes in its proteome upon abiotic and biotic stresses. Unlike cell compartments which are amenable to purification in sufficient amount prior to proteomic analysis, the xylem sap has to be collected in particular conditions to avoid contamination by intracellular proteins and to obtain enough material. A model plant like Arabidopsis thaliana is not suitable for such an analysis because efficient harvesting of xylem sap is difficult. The analysis of the xylem sap proteome also requires specific procedures to concentrate proteins and to focus on proteins predicted to be secreted. Indeed, xylem sap proteins appear to be synthesized and secreted in the root stele or to originate from dying differentiated xylem cells. This chapter describes protocols to collect xylem sap from Brassica species and to prepare total and N-glycoprotein extracts for identification of proteins by mass spectrometry analyses and bioinformatics.
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Inui H, Sawada M, Goto J, Yamazaki K, Kodama N, Tsuruta H, Eun H. A major latex-like protein is a key factor in crop contamination by persistent organic pollutants. PLANT PHYSIOLOGY 2013; 161:2128-35. [PMID: 23404917 PMCID: PMC3613481 DOI: 10.1104/pp.112.213645] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/31/2012] [Accepted: 02/09/2013] [Indexed: 05/22/2023]
Abstract
This is the first report, to our knowledge, to reveal important factors by which members of the Cucurbitaceae family, such as cucumber (Cucumis sativus), watermelon (Citrullus lanatus), melon (Cucumis melo), pumpkin (Cucurbita pepo), squash (C. pepo), and zucchini (C. pepo), are selectively polluted with highly toxic hydrophobic contaminants, including organochlorine insecticides and dioxins. Xylem sap of C. pepo ssp. pepo, which is a high accumulator of hydrophobic compounds, solubilized the hydrophobic compound pyrene into the aqueous phase via some protein(s). Sodium dodecyl sulfate-polyacrylamide gel electrophoresis of xylem sap of two C. pepo subspecies revealed that the amount of 17-kD proteins in C. pepo ssp. pepo was larger than that in C. pepo ssp. ovifera, a low accumulator, suggesting that these proteins may be related to the translocation of hydrophobic compounds. The protein bands at 17 kD contained major latex-like proteins (MLPs), and the corresponding genes MLP-PG1, MLP-GR1, and MLP-GR3 were cloned from the C. pepo cultivars Patty Green and Gold Rush. Expression of the MLP-GR3 gene in C. pepo cultivars was positively correlated with the band intensity of 17-kD proteins and bioconcentration factors toward dioxins and dioxin-like compounds. Recombinant MLP-GR3 bound polychlorinated biphenyls immobilized on magnetic beads, whereas recombinant MLP-PG1 and MLP-GR1 did not. These results indicate that the high expression of MLP-GR3 in C. pepo ssp. pepo plants and the existence of MLP-GR3 in their xylem sap are related to the efficient translocation of hydrophobic contaminants. These findings should be useful for decreasing the contamination of fruit of the Cucurbitaceae family as well as the phytoremediation of hydrophobic contaminants.
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Affiliation(s)
- Hideyuki Inui
- Research Center for Environmental Genomics, Kobe University, Kobe, Hyogo 657-8501, Japan.
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Turnbull CGN, Lopez-Cobollo RM. Heavy traffic in the fast lane: long-distance signalling by macromolecules. THE NEW PHYTOLOGIST 2013; 198:33-51. [PMID: 23398598 DOI: 10.1111/nph.12167] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/08/2012] [Accepted: 12/21/2012] [Indexed: 05/05/2023]
Abstract
The two major vascular conduits in plants, the xylem and phloem, theoretically provide opportunities for the long-distance translocation of almost any type of water-borne molecule. This review focuses on the signalling functions conveyed by the movement of macromolecules. Here, a signal is defined as the communication of information from source to destination, where it modifies development, physiology or defence through altered gene expression or by direct influences on other cellular processes. Xylem and phloem sap both contain diverse classes of proteins; in addition, phloem contains many full-length and small RNA species. Only a few of these mobile molecules have proven functions in signalling. The transduction of signals typically depends on connection to appropriate signalling pathways. Incoming protein signals require specific detection systems, generally via receptors. Mobile RNAs require either the translation or presence of a homologous target. Given that phloem sieve elements are enucleate and lack translation machinery, RNA function requires subsequent unloading at least into adjacent companion cells. The binding of RNA by proteins in ribonucleoprotein complexes enables the translocation of some signals, with evidence for both sequence-specific and size-specific binding. Several examples of long-distance macromolecular signalling are highlighted, including the FT protein signal which regulates flowering time and other developmental switches.
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Affiliation(s)
- Colin G N Turnbull
- Department of Life Sciences, Imperial College London, London, SW7 2AZ, UK
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Denancé N, Ranocha P, Oria N, Barlet X, Rivière MP, Yadeta KA, Hoffmann L, Perreau F, Clément G, Maia-Grondard A, van den Berg GCM, Savelli B, Fournier S, Aubert Y, Pelletier S, Thomma BPHJ, Molina A, Jouanin L, Marco Y, Goffner D. Arabidopsis wat1 (walls are thin1)-mediated resistance to the bacterial vascular pathogen, Ralstonia solanacearum, is accompanied by cross-regulation of salicylic acid and tryptophan metabolism. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2013; 73:225-39. [PMID: 22978675 DOI: 10.1111/tpj.12027] [Citation(s) in RCA: 85] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/07/2011] [Revised: 09/05/2012] [Accepted: 09/07/2012] [Indexed: 05/23/2023]
Abstract
Inactivation of Arabidopsis WAT1 (Walls Are Thin1), a gene required for secondary cell-wall deposition, conferred broad-spectrum resistance to vascular pathogens, including the bacteria Ralstonia solanacearum and Xanthomonas campestris pv. campestris, and the fungi Verticillium dahliae and Verticillium albo-atrum. Introduction of NahG, the bacterial salicylic acid (SA)-degrading salicylate hydroxylase gene, into the wat1 mutant restored full susceptibility to both R. solanacearum and X. campestris pv. campestris. Moreover, SA content was constitutively higher in wat1 roots, further supporting a role for SA in wat1-mediated resistance to vascular pathogens. By combining transcriptomic and metabolomic data, we demonstrated a general repression of indole metabolism in wat1-1 roots as shown by constitutive down-regulation of several genes encoding proteins of the indole glucosinolate biosynthetic pathway and reduced amounts of tryptophan (Trp), indole-3-acetic acid and neoglucobrassicin, the major form of indole glucosinolate in roots. Furthermore, the susceptibility of the wat1 mutant to R. solanacearum was partially restored when crossed with either the trp5 mutant, an over-accumulator of Trp, or Pro35S:AFB1-myc, in which indole-3-acetic acid signaling is constitutively activated. Our original hypothesis placed cell-wall modifications at the heart of the wat1 resistance phenotype. However, the results presented here suggest a mechanism involving root-localized metabolic channeling away from indole metabolites to SA as a central feature of wat1 resistance to R. solanacearum.
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Affiliation(s)
- Nicolas Denancé
- Université de Toulouse, UPS, Unité Mixte de Recherche 5546, Laboratoire de Recherche en Sciences Végétales, BP 42617, F-31326, Castanet-Tolosan, France
- Centre National de la Recherche Scientifique, CNRS, Unité Mixte de Recherche 5546, Laboratoire de Recherche en Sciences Végétales, BP 42617, F-31326, Castanet-Tolosan, France
| | - Philippe Ranocha
- Université de Toulouse, UPS, Unité Mixte de Recherche 5546, Laboratoire de Recherche en Sciences Végétales, BP 42617, F-31326, Castanet-Tolosan, France
- Centre National de la Recherche Scientifique, CNRS, Unité Mixte de Recherche 5546, Laboratoire de Recherche en Sciences Végétales, BP 42617, F-31326, Castanet-Tolosan, France
| | - Nicolas Oria
- Institut National de la Recherche Agronomique, INRA, AgroParisTech, Unité Mixte de Recherche 1318, Institut Jean-Pierre Bourgin, Centre de Versailles-Grignon, Route de Saint-Cyr, F-78026, Versailles, France
| | - Xavier Barlet
- Institut National de la Recherche Agronomique, INRA, Unité Mixte de Recherche 441, Laboratoire des Interactions Plantes Microorganismes, 24 Chemin de Borde Rouge, F-31326, Castanet-Tolosan, France
- Centre National de la Recherche Scientifique, CNRS, Unité Mixte de Recherche 2594, Laboratoire des Interactions Plantes Microorganismes, 24 Chemin de Borde Rouge, F-31326, Castanet-Tolosan, France
| | - Marie-Pierre Rivière
- Centro de Biotecnología y Genómica de Plantas, Universidad Politécnica de Madrid, Campus Montegancedo, E-28223, Pozuelo de Alarcón, Spain
| | - Koste A Yadeta
- Laboratory of Phytopathology, Wageningen University, Droevendaalsesteeg 1, 6708, PB Wageningen, The Netherlands
| | - Laurent Hoffmann
- Université de Toulouse, UPS, Unité Mixte de Recherche 5546, Laboratoire de Recherche en Sciences Végétales, BP 42617, F-31326, Castanet-Tolosan, France
- Centre National de la Recherche Scientifique, CNRS, Unité Mixte de Recherche 5546, Laboratoire de Recherche en Sciences Végétales, BP 42617, F-31326, Castanet-Tolosan, France
| | - François Perreau
- Institut National de la Recherche Agronomique, INRA, AgroParisTech, Unité Mixte de Recherche 1318, Institut Jean-Pierre Bourgin, Centre de Versailles-Grignon, Route de Saint-Cyr, F-78026, Versailles, France
| | - Gilles Clément
- Institut National de la Recherche Agronomique, INRA, AgroParisTech, Unité Mixte de Recherche 1318, Institut Jean-Pierre Bourgin, Centre de Versailles-Grignon, Route de Saint-Cyr, F-78026, Versailles, France
| | - Alessandra Maia-Grondard
- Institut National de la Recherche Agronomique, INRA, AgroParisTech, Unité Mixte de Recherche 1318, Institut Jean-Pierre Bourgin, Centre de Versailles-Grignon, Route de Saint-Cyr, F-78026, Versailles, France
| | - Grardy C M van den Berg
- Laboratory of Phytopathology, Wageningen University, Droevendaalsesteeg 1, 6708, PB Wageningen, The Netherlands
| | - Bruno Savelli
- Université de Toulouse, UPS, Unité Mixte de Recherche 5546, Laboratoire de Recherche en Sciences Végétales, BP 42617, F-31326, Castanet-Tolosan, France
- Centre National de la Recherche Scientifique, CNRS, Unité Mixte de Recherche 5546, Laboratoire de Recherche en Sciences Végétales, BP 42617, F-31326, Castanet-Tolosan, France
| | - Sylvie Fournier
- Université de Toulouse, UPS, Unité Mixte de Recherche 5546, Laboratoire de Recherche en Sciences Végétales, BP 42617, F-31326, Castanet-Tolosan, France
- Centre National de la Recherche Scientifique, CNRS, Unité Mixte de Recherche 5546, Laboratoire de Recherche en Sciences Végétales, BP 42617, F-31326, Castanet-Tolosan, France
| | - Yann Aubert
- Université de Toulouse, UPS, Unité Mixte de Recherche 5546, Laboratoire de Recherche en Sciences Végétales, BP 42617, F-31326, Castanet-Tolosan, France
- Centre National de la Recherche Scientifique, CNRS, Unité Mixte de Recherche 5546, Laboratoire de Recherche en Sciences Végétales, BP 42617, F-31326, Castanet-Tolosan, France
| | - Sandra Pelletier
- Unité de Recherche en Génomique Végétale, Institut National de la Recherche Agronomique (INRA)/ Centre National de la Recherche Scientifique (CNRS), 91057, Evry, France
| | - Bart P H J Thomma
- Laboratory of Phytopathology, Wageningen University, Droevendaalsesteeg 1, 6708, PB Wageningen, The Netherlands
| | - Antonio Molina
- Centro de Biotecnología y Genómica de Plantas, Universidad Politécnica de Madrid, Campus Montegancedo, E-28223, Pozuelo de Alarcón, Spain
| | - Lise Jouanin
- Institut National de la Recherche Agronomique, INRA, AgroParisTech, Unité Mixte de Recherche 1318, Institut Jean-Pierre Bourgin, Centre de Versailles-Grignon, Route de Saint-Cyr, F-78026, Versailles, France
| | - Yves Marco
- Institut National de la Recherche Agronomique, INRA, Unité Mixte de Recherche 441, Laboratoire des Interactions Plantes Microorganismes, 24 Chemin de Borde Rouge, F-31326, Castanet-Tolosan, France
- Centre National de la Recherche Scientifique, CNRS, Unité Mixte de Recherche 2594, Laboratoire des Interactions Plantes Microorganismes, 24 Chemin de Borde Rouge, F-31326, Castanet-Tolosan, France
| | - Deborah Goffner
- Université de Toulouse, UPS, Unité Mixte de Recherche 5546, Laboratoire de Recherche en Sciences Végétales, BP 42617, F-31326, Castanet-Tolosan, France
- Centre National de la Recherche Scientifique, CNRS, Unité Mixte de Recherche 5546, Laboratoire de Recherche en Sciences Végétales, BP 42617, F-31326, Castanet-Tolosan, France
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Zimmermann MR, Hafke JB, van Bel AJE, Furch ACU. Interaction of xylem and phloem during exudation and wound occlusion in Cucurbita maxima. PLANT, CELL & ENVIRONMENT 2013; 36:237-47. [PMID: 22765252 DOI: 10.1111/j.1365-3040.2012.02571.x] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/06/2023]
Abstract
Collection of cucurbit exudates from cut petioles has been a powerful tool for gaining knowledge on phloem sap composition without full notion of the complex exudation mechanism. Only few publications explicitly mentioned that exudates were collected from the basal side of the cut, which exudes more copiously than the apical side. This is surprising since only exudation from the apical side is supposedly driven by phloem pressure gradients. Composition of carbohydrates and pH values at both wounding sides are equal, whereas protein concentration is higher at the basal side. Apparently, exudation is far more complex than just the delivery of phloem sap. Xylem involvement is indicated by lower protein concentrations after elimination of root pressure. Moreover, dye was sucked into xylem vessels owing to relaxation of negative pressure after cutting. The lateral water efflux from the vessels increases turgor of surrounding cells including sieve elements. Simultaneously, detached parietal proteins (PP1/PP2) induce occlusion of sieve plates and cover wound surface. If root pressure is strong enough, pure xylem sap can be collected after removal of the occlusion plug at the wound surface. The present findings provide a mechanism of sap exudation in Cucurbita maxima, in which the contribution of xylem water is integrated.
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Affiliation(s)
- Matthias R Zimmermann
- Institute for Phytopathology and Applied Zoology, Heinrich-Buff-Ring 26-32, Gießen, Germany.
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Liao C, Liu R, Zhang F, Li C, Li X. Nitrogen under- and over-supply induces distinct protein responses in maize xylem sap. JOURNAL OF INTEGRATIVE PLANT BIOLOGY 2012; 54:374-387. [PMID: 22501030 DOI: 10.1111/j.1744-7909.2012.01122.x] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/29/2023]
Abstract
Xylem sap primarily transports water and mineral nutrients such as nitrogen (N) from roots to shoots in vascular plants. However, it remains largely unknown how nitrogenous compounds, especially proteins in xylem sap, respond to N under- or over-supply. We found that reducing N supply increased amino-N percentage of total N in maize (Zea mays L.) xylem sap. Proteomic analysis showed that 23 proteins in the xylem sap of maize plants, including 12 newly identified ones, differentially accumulated in response to various N supplies. Fifteen of these 23 proteins were primarily involved in general abiotic or biotic stress responses, whereas the other five proteins appeared to respond largely to N under- or over-supply, suggesting distinct protein responses in maize xylem upon N under- and over-supply. Furthermore, one putative xylanase inhibitor and two putative O-glycosyl hydrolases had preferential gene expression in shoots.
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Affiliation(s)
- Chengsong Liao
- Department of Plant Nutrition, College of Resources and Environmental Sciences, China Agricultural University, Beijing 100193, China
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Spatially selective hormonal control of RAP2.6L and ANAC071 transcription factors involved in tissue reunion in Arabidopsis. Proc Natl Acad Sci U S A 2011; 108:16128-32. [PMID: 21911380 DOI: 10.1073/pnas.1110443108] [Citation(s) in RCA: 122] [Impact Index Per Article: 9.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023] Open
Abstract
When grafting or wounding disconnects stem tissues, new tissues are generated to restore the lost connection. In this study, the molecular mechanism of such healing was elucidated in injured stems of Arabidopsis. Soon after the inflorescence stems were incised, the pith cells started to divide. This process was strongly inhibited by the elimination of cauline leaves, shoot apices, or lateral buds that reduced the indole-3-acetic acid supply. Microarray and quantitative RT-PCR analyses revealed that genes related to cell division, phytohormones, and transcription factors were expressed because of incision. Among them, two plant-specific transcription factor genes, ANAC071 and RAP2.6L, were abundantly expressed. ANAC071 was expressed at 1-3 d after cutting exclusively in the upper region of the cut gap, with concomitant accumulation of indole-3-acetic acid. In contrast, RAP2.6L was expressed at 1 d after cutting exclusively in the lower region, with concomitant deprivation of indole-3-acetic acid. The expression of ANAC071 and RAP2.6L were also promoted by ethylene and jasmonic acid, respectively. In transformants suppressing the function of RAP2.6L or ANAC071, the division of pith cells was inhibited. Furthermore, the ethylene signaling-defective ein2 mutant showed incomplete healing. Hence, plant-specific transcription factors differentially expressed around the cut position were essential for tissue reunion of Arabidopsis wounded flowering stems and were under opposite control by polar-transported auxin, with modification by the ethylene and jasmonic acid wound-inducible hormones.
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Fernandez-Garcia N, Hernandez M, Casado-Vela J, Bru R, Elortza F, Hedden P, Olmos E. Changes to the proteome and targeted metabolites of xylem sap in Brassica oleracea in response to salt stress. PLANT, CELL & ENVIRONMENT 2011; 34:821-36. [PMID: 21276013 DOI: 10.1111/j.1365-3040.2011.02285.x] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/08/2023]
Abstract
Root-to-shoot signalling via xylem sap is an important mechanism by which plants respond to stress. This signalling could be mediated by alteration in the concentrations of inorganic and/or organic molecules. The effect of salt stress on the contents of xylem sap in Brassica olarecea has been analysed by mass spectrometry in order to quantify these changes. Subcellular location of arabinogalactan proteins (AGPs) by immunogold labelling and peroxidase isozymes was also analysed by isoelectrofocusing. The xylem sap metabolome analysis demonstrated the presence of many organic compounds such as sugars, organic acids and amino acids. Of these, amino acid concentrations, particularly that of glutamine, the major amino acid in the sap, were substantially reduced by salt stress. The xylem sap proteome analysis demonstrated the accumulation of enzymes involved in xylem differentiation and lignification, such as cystein proteinases, acid peroxidases, and a putative hydroxycinnamoyl-CoA:shikimate hydroxycinnamoyl transferase under salt stress. The peroxidase isozyme pattern showed that salt stress induced a high accumulation of an acid isoform. These results suggest that xylem differentiation and lignification is induced by salt stress. The combination of different methods to analyse the xylem sap composition provides new insights into mechanisms in plant development and signalling under salt stress.
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Affiliation(s)
- N Fernandez-Garcia
- Department of Abiotic Stress and Plant Pathology. CEBAS-CSIC. P.O. Box 164. Murcia, Spain
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Krishnan HB, Natarajan SS, Bennett JO, Sicher RC. Protein and metabolite composition of xylem sap from field-grown soybeans (Glycine max). PLANTA 2011; 233:921-31. [PMID: 21246215 DOI: 10.1007/s00425-011-1352-9] [Citation(s) in RCA: 38] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/18/2010] [Accepted: 01/05/2011] [Indexed: 05/08/2023]
Abstract
The xylem, in addition to transporting water, nutrients and metabolites, is also involved in long-distance signaling in response to pathogens, symbionts and environmental stresses. Xylem sap has been shown to contain a number of proteins including metabolic enzymes, stress-related proteins, signal transduction proteins and putative transcription factors. Previous studies on xylem sap have mostly utilized plants grown in controlled environmental chambers. However, plants in the field are subjected to high light and to environmental stress that is not normally found in growth chambers. In this study, we have examined the protein and metabolite composition of xylem sap from field-grown cultivated soybean plants. One-dimensional gel electrophoresis of xylem sap from determinate, indeterminate, nodulating and non-nodulating soybean cultivars revealed similar protein profiles consisting of about 8-10 prominent polypeptides. Two-dimensional gel electrophoresis of soybean xylem sap resulted in the visualization of about 60 distinct protein spots. A total of 38 protein spots were identified using MALDI-TOF MS and LC-MS/MS. The most abundant proteins present in the xylem sap were identified as 31 and 28 kDa vegetative storage proteins. In addition, several proteins that are conserved among different plant species were also identified. Diurnal changes in the metabolite profile of xylem sap collected during a 24-h cycle revealed that asparagine and aspartate were the two predominant amino acids irrespective of the time collected. Pinitol (D-3-O-methyl-chiro-inositol) was the most abundant carbohydrate present. The possible roles of xylem sap proteins and metabolites as nutrient reserves for sink tissue and as an indicator of biotic stress are also discussed.
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Affiliation(s)
- Hari B Krishnan
- Plant Genetics Research Unit, Agricultural Research Service, USDA, 205 Curtis Hall, Columbia, MO 65211, USA.
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Ligat L, Lauber E, Albenne C, San Clemente H, Valot B, Zivy M, Pont-Lezica R, Arlat M, Jamet E. Analysis of the xylem sap proteome of Brassica oleracea reveals a high content in secreted proteins. Proteomics 2011; 11:1798-813. [PMID: 21413152 DOI: 10.1002/pmic.201000781] [Citation(s) in RCA: 75] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2010] [Revised: 02/01/2011] [Accepted: 02/01/2011] [Indexed: 01/03/2023]
Abstract
Xylem plays a major role in plant development and is considered part of the apoplast. Here, we studied the proteome of Brassica oleracea cv Bartolo and compared it to the plant cell wall proteome of another Brassicaceae, the model plant Arabidopsis thaliana. B. oleracea was chosen because it is technically difficult to harvest enough A. thaliana xylem sap for proteomic analysis. We studied the whole proteome and an N-glycoproteome obtained after Concanavalin A affinity chromatography. Altogether, 189 proteins were identified by LC-MS/MS using Brassica EST and cDNA sequences. A predicted signal peptide was found in 164 proteins suggesting that most proteins of the xylem sap are secreted. Eighty-one proteins were identified in the N-glycoproteome, with 25 of them specific of this fraction, suggesting that they were concentrated during the chromatography step. All the protein families identified in this study were found in the cell wall proteomes. However, proteases and oxido-reductases were more numerous in the xylem sap proteome, whereas enzyme inhibitors were rare. The origin of xylem sap proteins is discussed. All the experimental data including the MS/MS data were made available in the WallProtDB cell wall proteomic database.
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Affiliation(s)
- Laetitia Ligat
- Université de Toulouse, UPS, UMR, Surfaces Cellulaires et Signalisation chez les Végétaux, Castanet-Tolosan, France
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Gortan E, Nardini A, Salleo S, Jansen S. Pit membrane chemistry influences the magnitude of ion-mediated enhancement of xylem hydraulic conductance in four Lauraceae species. TREE PHYSIOLOGY 2011; 31:48-58. [PMID: 21389001 DOI: 10.1093/treephys/tpq101] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/14/2023]
Abstract
The ion-mediated enhancement of xylem hydraulic conductivity in angiosperms is thought to be controlled by the pectin chemistry of intervessel pit membranes. However, there is little or no direct evidence on the ultrastructure and chemical nature of pit membranes in species that show an 'ionic effect'. The potential link between the magnitude of the ionic effect and pectin composition in intervessel pit membranes of four Lauraceae species (Laurus nobilis, Lindera megaphylla, Litsea sericea and Umbellularia californica) that show rather similar vessel and pit dimensions was studied using transmission electron microscopy (TEM). The TEM observations confirmed the presence of a pectic matrix associated with intervessel pit membranes, indicating that the relative abundance of acidic versus methylesterified pectins was closely related to the ionic effect. The two species examined with a high ionic effect ~20%, i.e. Laurus nobilis and Umbellularia californica) showed relatively high levels of acidic pectins, whereas methylesterified pectins were abundant in Lindera megaphylla and Litsea sericea, which showed a low ionic effect (~10%). Variation in the ionic effect is strongly associated with the chemical nature of pit membrane pectins in the species studied. Our findings support the current interpretation of the ionic effect due to dynamic swelling and shrinking behaviour of pit membrane pectins.
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Affiliation(s)
- Emmanuelle Gortan
- Dipartimento di Scienze della Vita, Università di Trieste, Via L. Giorgieri 10, Trieste, Italy
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Murano H, Otani T, Seike N. Dieldrin-dissolving abilities of the xylem saps of several plant families, particularly Cucurbita pepo L. ENVIRONMENTAL TOXICOLOGY AND CHEMISTRY 2010; 29:2269-2277. [PMID: 20872691 DOI: 10.1002/etc.288] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/29/2023]
Abstract
The uptake ability of hydrophobic organic chemicals by plants and the nature of xylem sap of the plants were studied. The plants were grown in soil contaminated with dieldrin. High amounts of dieldrin were detected in the shoots of Cucurbita pepo and Cucumis sativus, but little was seen in the shoots of Brassica oleracea var. italica, Solanum lycopersicum, Glycine max, Zea mays, and Helianthus annuus. The xylem saps of C. pepo and C. sativus leached dieldrin adsorbed on C8 granules, but those of the other plants did not. The xylem saps of C. pepo and C. sativus eluted high amounts of dieldrin from the size-exclusion chromatography column near the fractions of RNase A (13.7 kDa) after Aprotinin (6.5 kDa), which has a larger molecular weight than dieldrin (381). The enhancement of dieldrin solubility by xylem sap was reduced by proteinase and heating. It was suspected that the protein-like materials in the xylem sap delivered dieldrin from the roots to the shoots.
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Affiliation(s)
- Hirotatsu Murano
- Organochemicals Division, National Institute for Agro-Environmental Sciences, Tsukuba, Ibaraki 305-8604, Japan
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Neumann PM, Weissman R, Stefano G, Mancuso S. Accumulation of xylem transported protein at pit membranes and associated reductions in hydraulic conductance. JOURNAL OF EXPERIMENTAL BOTANY 2010; 61:1711-7. [PMID: 20181661 PMCID: PMC2852661 DOI: 10.1093/jxb/erq037] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/16/2009] [Revised: 01/07/2010] [Accepted: 02/02/2010] [Indexed: 05/19/2023]
Abstract
Proteins and traces of polysaccharide are the only polymeric colloids consistently transported in the xylem sap of plants. The hypothesis that such proteins could have physical inhibitory effects on xylem water transport was investigated. Ovalbumin, with a molecular weight of 45 kDa and a molecular diameter of 5.4 nm, is an inert, water-soluble protein that is midway along the size range of endogenous xylem sap proteins. Solutions of ovalbumin conjugated to a fluorescent marker and supplied to transpiring shoot explants of tobacco (Nicotiana tabacum L.) and olive (Olea europaea L.) were shown by confocal laser scanning microscopy to accumulate specifically at wall-based pit membranes that connect neighbouring xylem conduits. In addition, pressure-induced perfusion of micro-filtered ovalbumin solutions, at concentrations similar to those of endogenous xylem sap proteins, through the xylem of tobacco stem or olive twig segments resulted in the retention of c. 40% of the ovalbumin and reductions in the axial hydraulic conductance of the xylem. Smaller molecules such as Texas Red 3000 (MW 3 kDa) and Alexafluor 488-cadaverin conjugates (MW 0.64 kDa) did not show similar characteristics. The partial reduction in xylem hydraulic conductance appeared to be related to the accumulation of ovalbumin at xylem pit membranes and the consequent fouling of trans-membrane water-conducting pores with smaller diameters than those of the ovalbumin molecules. Potential implications of these novel findings for whole-plant water relations are considered.
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Affiliation(s)
- Peter M Neumann
- Department of Environmental, Water and Agricultural Engineering, Technion Israel Institute of Technology, Haifa 32000, Israel.
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Kuroha T, Okuda A, Arai M, Komatsu Y, Sato S, Kato T, Tabata S, Satoh S. Identification of Arabidopsis subtilisin-like serine protease specifically expressed in root stele by gene trapping. PHYSIOLOGIA PLANTARUM 2009; 137:281-8. [PMID: 19832941 DOI: 10.1111/j.1399-3054.2009.01281.x] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/10/2023]
Abstract
Xylem plays a role not only in the transport of water and nutrients but also in the regulation of growth and development through the transport of biologically active substances. In addition to mineral salts, xylem sap contains hormones, organic nutrients and proteins. However, the physiological functions of most of those substances remain unclear. To explore genes involved in xylem sap production, we identified Arabidopsis genes expressed in the root stele of the root hair zone from gene-trap lines by randomly inserting the beta-glucuronidase gene into the genome. Among 26 000 gene-trap lines, we found that 10 lines had beta-glucuronidase (GUS) staining predominantly in the root stele of the root hair zone and no GUS staining in the shoots. Of these 10 lines, 2 lines showed that gene-trap tags inserted into the promoter region of the same gene, denoted Arabidopsis thaliana subtilase 4.12(AtSBT4.12). Analysis of AtSBT4.12 promoter using an pAtSBT4.12::beta-glucuronidase transgenic line showed that the AtSBT4.12 gene was expressed only in the root stele of the root hair zone. AtSBT4.12 expression in roots was increased by application of methyl jasmonate. Subtilase proteins are commonly detected in proteomic analyses of xylem sap from various plant species, including Brassica napus, a relative of Arabidopsis. These results suggest that AtSBT4.12 may be a protein localized in the apoplast of root stele including xylem vessel and involved in stress responses in Arabidopsis roots.
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Affiliation(s)
- Takeshi Kuroha
- Graduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Ibaraki, Japan
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