1
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Ellis KE, Bervoets S, Smihula H, Ganguly I, Vigato E, Auer TO, Benton R, Litwin-Kumar A, Caron SJC. Evolution of connectivity architecture in the Drosophila mushroom body. Nat Commun 2024; 15:4872. [PMID: 38849331 PMCID: PMC11161526 DOI: 10.1038/s41467-024-48839-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/24/2023] [Accepted: 05/14/2024] [Indexed: 06/09/2024] Open
Abstract
Brain evolution has primarily been studied at the macroscopic level by comparing the relative size of homologous brain centers between species. How neuronal circuits change at the cellular level over evolutionary time remains largely unanswered. Here, using a phylogenetically informed framework, we compare the olfactory circuits of three closely related Drosophila species that differ in their chemical ecology: the generalists Drosophila melanogaster and Drosophila simulans and Drosophila sechellia that specializes on ripe noni fruit. We examine a central part of the olfactory circuit that, to our knowledge, has not been investigated in these species-the connections between projection neurons and the Kenyon cells of the mushroom body-and identify species-specific connectivity patterns. We found that neurons encoding food odors connect more frequently with Kenyon cells, giving rise to species-specific biases in connectivity. These species-specific connectivity differences reflect two distinct neuronal phenotypes: in the number of projection neurons or in the number of presynaptic boutons formed by individual projection neurons. Finally, behavioral analyses suggest that such increased connectivity enhances learning performance in an associative task. Our study shows how fine-grained aspects of connectivity architecture in an associative brain center can change during evolution to reflect the chemical ecology of a species.
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Affiliation(s)
| | - Sven Bervoets
- School of Biological Sciences, University of Utah, Salt Lake City, USA
| | - Hayley Smihula
- School of Biological Sciences, University of Utah, Salt Lake City, USA
| | - Ishani Ganguly
- Center for Theoretical Neuroscience, Columbia University, New York, USA
| | - Eva Vigato
- School of Biological Sciences, University of Utah, Salt Lake City, USA
| | - Thomas O Auer
- Center for Integrative Genomics, Faculty of Biology and Medicine, University of Lausanne, Lausanne, Switzerland
- Department of Biology, University of Fribourg, Fribourg, Switzerland
| | - Richard Benton
- Center for Integrative Genomics, Faculty of Biology and Medicine, University of Lausanne, Lausanne, Switzerland
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2
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Bustillo ME, Douthit J, Astigarraga S, Treisman JE. Two distinct mechanisms of Plexin A function in Drosophila optic lobe lamination and morphogenesis. Development 2024; 151:dev202237. [PMID: 38738602 PMCID: PMC11190435 DOI: 10.1242/dev.202237] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/06/2023] [Accepted: 04/28/2024] [Indexed: 05/14/2024]
Abstract
Visual circuit development is characterized by subdivision of neuropils into layers that house distinct sets of synaptic connections. We find that, in the Drosophila medulla, this layered organization depends on the axon guidance regulator Plexin A. In Plexin A null mutants, synaptic layers of the medulla neuropil and arborizations of individual neurons are wider and less distinct than in controls. Analysis of semaphorin function indicates that Semaphorin 1a, acting in a subset of medulla neurons, is the primary partner for Plexin A in medulla lamination. Removal of the cytoplasmic domain of endogenous Plexin A has little effect on the formation of medulla layers; however, both null and cytoplasmic domain deletion mutations of Plexin A result in an altered overall shape of the medulla neuropil. These data suggest that Plexin A acts as a receptor to mediate morphogenesis of the medulla neuropil, and as a ligand for Semaphorin 1a to subdivide it into layers. Its two independent functions illustrate how a few guidance molecules can organize complex brain structures by each playing multiple roles.
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Affiliation(s)
- Maria E. Bustillo
- Department of Cell Biology, New York University Grossman School of Medicine, 435 E. 30th Street, New York, NY 10016, USA
| | - Jessica Douthit
- Department of Cell Biology, New York University Grossman School of Medicine, 435 E. 30th Street, New York, NY 10016, USA
| | - Sergio Astigarraga
- Department of Cell Biology, New York University Grossman School of Medicine, 435 E. 30th Street, New York, NY 10016, USA
| | - Jessica E. Treisman
- Department of Cell Biology, New York University Grossman School of Medicine, 435 E. 30th Street, New York, NY 10016, USA
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3
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Parnas M, Manoim JE, Lin AC. Sensory encoding and memory in the mushroom body: signals, noise, and variability. Learn Mem 2024; 31:a053825. [PMID: 38862174 PMCID: PMC11199953 DOI: 10.1101/lm.053825.123] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/10/2023] [Accepted: 11/21/2023] [Indexed: 06/13/2024]
Abstract
To survive in changing environments, animals need to learn to associate specific sensory stimuli with positive or negative valence. How do they form stimulus-specific memories to distinguish between positively/negatively associated stimuli and other irrelevant stimuli? Solving this task is one of the functions of the mushroom body, the associative memory center in insect brains. Here we summarize recent work on sensory encoding and memory in the Drosophila mushroom body, highlighting general principles such as pattern separation, sparse coding, noise and variability, coincidence detection, and spatially localized neuromodulation, and placing the mushroom body in comparative perspective with mammalian memory systems.
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Affiliation(s)
- Moshe Parnas
- Department of Physiology and Pharmacology, Faculty of Medicine, Tel Aviv University, Tel Aviv 69978, Israel
- Sagol School of Neuroscience, Tel Aviv University, Tel Aviv 69978, Israel
| | - Julia E Manoim
- Department of Physiology and Pharmacology, Faculty of Medicine, Tel Aviv University, Tel Aviv 69978, Israel
| | - Andrew C Lin
- School of Biosciences, University of Sheffield, Sheffield S10 2TN, United Kingdom
- Neuroscience Institute, University of Sheffield, Sheffield S10 2TN, United Kingdom
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4
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Wang Q, Smid HM, Dicke M, Haverkamp A. The olfactory system of Pieris brassicae caterpillars: from receptors to glomeruli. INSECT SCIENCE 2024; 31:469-488. [PMID: 38105530 DOI: 10.1111/1744-7917.13304] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/12/2023] [Revised: 10/17/2023] [Accepted: 10/30/2023] [Indexed: 12/19/2023]
Abstract
The olfactory system of adult lepidopterans is among the best described neuronal circuits. However, comparatively little is known about the organization of the olfactory system in the larval stage of these insects. Here, we explore the expression of olfactory receptors and the organization of olfactory sensory neurons in caterpillars of Pieris brassicae, a significant pest species in Europe and a well-studied species for its chemical ecology. To describe the larval olfactory system in this species, we first analyzed the head transcriptome of third-instar larvae (L3) and identified 16 odorant receptors (ORs) including the OR coreceptor (Orco), 13 ionotropic receptors (IRs), and 8 gustatory receptors (GRs). We then quantified the expression of these 16 ORs in different life stages, using qPCR, and found that the majority of ORs had significantly higher expression in the L4 stage than in the L3 and L5 stages, indicating that the larval olfactory system is not static throughout caterpillar development. Using an Orco-specific antibody, we identified all olfactory receptor neurons (ORNs) expressing the Orco protein in L3, L4, and L5 caterpillars and found a total of 34 Orco-positive ORNs, distributed among three sensilla on the antenna. The number of Orco-positive ORNs did not differ among the three larval instars. Finally, we used retrograde axon tracing of the antennal nerve and identified a mean of 15 glomeruli in the larval antennal center (LAC), suggesting that the caterpillar olfactory system follows a similar design as the adult olfactory system, although with a lower numerical redundancy. Taken together, our results provide a detailed analysis of the larval olfactory neurons in P. brassicae, highlighting both the differences as well as the commonalities with the adult olfactory system. These findings contribute to a better understanding of the development of the olfactory system in insects and its life-stage-specific adaptations.
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Affiliation(s)
- Qi Wang
- Laboratory of Entomology, Wageningen University and Research, Wageningen, the Netherlands
| | - Hans M Smid
- Laboratory of Entomology, Wageningen University and Research, Wageningen, the Netherlands
| | - Marcel Dicke
- Laboratory of Entomology, Wageningen University and Research, Wageningen, the Netherlands
| | - Alexander Haverkamp
- Laboratory of Entomology, Wageningen University and Research, Wageningen, the Netherlands
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5
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Takagi S, Sancer G, Abuin L, Stupski SD, Arguello JR, Prieto-Godino LL, Stern DL, Cruchet S, Alvarez-Ocana R, Wienecke CFR, van Breugel F, Jeanne JM, Auer TO, Benton R. Sensory neuron population expansion enhances odor tracking without sensitizing projection neurons. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2023.09.15.556782. [PMID: 37745467 PMCID: PMC10515935 DOI: 10.1101/2023.09.15.556782] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 09/26/2023]
Abstract
The evolutionary expansion of sensory neuron populations detecting important environmental cues is widespread, but functionally enigmatic. We investigated this phenomenon through comparison of homologous neural pathways of Drosophila melanogaster and its close relative Drosophila sechellia , an extreme specialist for Morinda citrifolia noni fruit. D. sechellia has evolved species-specific expansions in select, noni-detecting olfactory sensory neuron (OSN) populations, through multigenic changes. Activation and inhibition of defined proportions of neurons demonstrate that OSN population increases contribute to stronger, more persistent, noni-odor tracking behavior. These sensory neuron expansions result in increased synaptic connections with their projection neuron (PN) partners, which are conserved in number between species. Surprisingly, having more OSNs does not lead to greater odor-evoked PN sensitivity or reliability. Rather, pathways with increased sensory pooling exhibit reduced PN adaptation, likely through weakened lateral inhibition. Our work reveals an unexpected functional impact of sensory neuron expansions to explain ecologically-relevant, species-specific behavior.
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6
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Chang H, Unni AP, Tom MT, Cao Q, Liu Y, Wang G, Llorca LC, Brase S, Bucks S, Weniger K, Bisch-Knaden S, Hansson BS, Knaden M. Odorant detection in a locust exhibits unusually low redundancy. Curr Biol 2023; 33:5427-5438.e5. [PMID: 38070506 DOI: 10.1016/j.cub.2023.11.017] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/15/2023] [Revised: 10/11/2023] [Accepted: 11/08/2023] [Indexed: 12/21/2023]
Abstract
Olfactory coding, from insects to humans, is canonically considered to involve considerable across-fiber coding already at the peripheral level, thereby allowing recognition of vast numbers of odor compounds. We show that the migratory locust has evolved an alternative strategy built on highly specific odorant receptors feeding into a complex primary processing center in the brain. By collecting odors from food and different life stages of the locust, we identified 205 ecologically relevant odorants, which we used to deorphanize 48 locust olfactory receptors via ectopic expression in Drosophila. Contrary to the often broadly tuned olfactory receptors of other insects, almost all locust receptors were found to be narrowly tuned to one or very few ligands. Knocking out a single receptor using CRISPR abolished physiological and behavioral responses to the corresponding ligand. We conclude that the locust olfactory system, with most olfactory receptors being narrowly tuned, differs from the so-far described olfactory systems.
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Affiliation(s)
- Hetan Chang
- Department of Evolutionary Neuroethology, Max Planck Institute for Chemical Ecology, Hans Knoell Strasse 8, 07745 Jena, Germany; Shenzhen Branch, Guangdong Laboratory for Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture and Rural Afairs, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen 518120, China
| | - Anjana P Unni
- Department of Evolutionary Neuroethology, Max Planck Institute for Chemical Ecology, Hans Knoell Strasse 8, 07745 Jena, Germany
| | - Megha Treesa Tom
- Department of Evolutionary Neuroethology, Max Planck Institute for Chemical Ecology, Hans Knoell Strasse 8, 07745 Jena, Germany
| | - Qian Cao
- State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing 100193, China
| | - Yang Liu
- State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing 100193, China
| | - Guirong Wang
- Shenzhen Branch, Guangdong Laboratory for Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture and Rural Afairs, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen 518120, China
| | - Lucas Cortés Llorca
- Department of Evolutionary Neuroethology, Max Planck Institute for Chemical Ecology, Hans Knoell Strasse 8, 07745 Jena, Germany
| | - Sabine Brase
- Department of Evolutionary Neuroethology, Max Planck Institute for Chemical Ecology, Hans Knoell Strasse 8, 07745 Jena, Germany
| | - Sascha Bucks
- Department of Evolutionary Neuroethology, Max Planck Institute for Chemical Ecology, Hans Knoell Strasse 8, 07745 Jena, Germany
| | - Kerstin Weniger
- Department of Evolutionary Neuroethology, Max Planck Institute for Chemical Ecology, Hans Knoell Strasse 8, 07745 Jena, Germany
| | - Sonja Bisch-Knaden
- Department of Evolutionary Neuroethology, Max Planck Institute for Chemical Ecology, Hans Knoell Strasse 8, 07745 Jena, Germany
| | - Bill S Hansson
- Department of Evolutionary Neuroethology, Max Planck Institute for Chemical Ecology, Hans Knoell Strasse 8, 07745 Jena, Germany
| | - Markus Knaden
- Department of Evolutionary Neuroethology, Max Planck Institute for Chemical Ecology, Hans Knoell Strasse 8, 07745 Jena, Germany.
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7
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Ellis KE, Domagala DM, Caron SJC. Mapping Kenyon cell inputs in Drosophila using dye electroporation. STAR Protoc 2023; 4:102478. [PMID: 37864788 PMCID: PMC10616406 DOI: 10.1016/j.xpro.2023.102478] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/18/2023] [Revised: 05/31/2023] [Accepted: 06/30/2023] [Indexed: 10/23/2023] Open
Abstract
Here, we describe a technique for charting the inputs of individual Kenyon cells in the Drosophila brain. In this technique, a single Kenyon cell per brain hemisphere is photo-labeled to visualize its claw-like dendritic terminals; a dye-filled electrode is used to backfill the projection neuron connected to each claw. This process can be repeated in hundreds of brains to build a connectivity matrix. Statistical analyses of such a matrix can reveal connectivity patterns such as random input and biased connectivity. For complete details on the use and execution of this protocol, please refer to Hayashi et al. (2022).1.
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Affiliation(s)
| | - Drue Marie Domagala
- School of Biological Sciences, University of Utah, Salt Lake City, UT 84112, USA
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8
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Depetris-Chauvin A, Galagovsky D, Keesey IW, Hansson BS, Sachse S, Knaden M. Evolution at multiple processing levels underlies odor-guided behavior in the genus Drosophila. Curr Biol 2023; 33:4771-4785.e7. [PMID: 37804828 DOI: 10.1016/j.cub.2023.09.039] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/11/2023] [Revised: 08/02/2023] [Accepted: 09/15/2023] [Indexed: 10/09/2023]
Abstract
Olfaction is a fundamental sense guiding animals to their food. How the olfactory system evolves and influences behavior is still poorly understood. Here, we selected five drosophilid species, including Drosophila melanogaster, inhabiting different ecological niches to compare their olfactory systems at multiple levels. We first identified ecologically relevant natural food odorants from every species and established species-specific odorant preferences. To compare odor coding in sensory neurons, we analyzed the antennal lobe (AL) structure, generated glomerular atlases, and developed GCaMP transgenic lines for all species. Although subsets of glomeruli showed distinct tuning profiles, odorants inducing species-specific preferences were coded generally similarly. Species distantly related or occupying different habitats showed more evident differences in odor coding, and further analysis revealed that changes in olfactory receptor (OR) sequences partially explain these differences. Our results demonstrate that genetic distance in phylogeny and ecological niche occupancy are key determinants in the evolution of ORs, AL structures, odor coding, and behavior. Interestingly, changes in odor coding among species could not be explained by evolutionary changes at a single olfactory processing level but rather are a complex phenomenon based on changes at multiple levels.
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Affiliation(s)
- Ana Depetris-Chauvin
- Max Planck Institute for Chemical Ecology, Department of Evolutionary Neuroethology, 07745 Jena, Germany; Research Group Olfactory Coding, Max Planck Institute for Chemical Ecology, 07745 Jena, Germany
| | - Diego Galagovsky
- Max Planck Institute for Chemical Ecology, Department of Evolutionary Neuroethology, 07745 Jena, Germany
| | - Ian W Keesey
- Max Planck Institute for Chemical Ecology, Department of Evolutionary Neuroethology, 07745 Jena, Germany
| | - Bill S Hansson
- Max Planck Institute for Chemical Ecology, Department of Evolutionary Neuroethology, 07745 Jena, Germany
| | - Silke Sachse
- Research Group Olfactory Coding, Max Planck Institute for Chemical Ecology, 07745 Jena, Germany.
| | - Markus Knaden
- Max Planck Institute for Chemical Ecology, Department of Evolutionary Neuroethology, 07745 Jena, Germany.
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9
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Bandyopadhyay P, Sachse S. Mixing things up! - how odor blends are processed in Drosophila. CURRENT OPINION IN INSECT SCIENCE 2023; 59:101099. [PMID: 37562651 DOI: 10.1016/j.cois.2023.101099] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/26/2023] [Revised: 07/26/2023] [Accepted: 08/02/2023] [Indexed: 08/12/2023]
Abstract
Insects have to navigate a complex and rich olfactory environment consisting of mixtures of odors at varying ratios. However, we understand little of how the olfactory system represents these complex blends. This review aims to highlight some of the recent results of studying this mixture code, in the Drosophila melanogaster olfactory system, as well as gives a short background to one of the most challenging questions in olfaction - how are mixtures encoded in the brain?
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Affiliation(s)
- Pramit Bandyopadhyay
- Research Group Olfactory Coding, Max Planck Institute for Chemical Ecology, Hans-Knoell-Str. 8, 07745 Jena, Germany
| | - Silke Sachse
- Research Group Olfactory Coding, Max Planck Institute for Chemical Ecology, Hans-Knoell-Str. 8, 07745 Jena, Germany.
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10
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Nishino H. Spatial odor map formation, development, and possible function in a nocturnal insect. CURRENT OPINION IN INSECT SCIENCE 2023; 59:101087. [PMID: 37468043 DOI: 10.1016/j.cois.2023.101087] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/27/2023] [Revised: 07/11/2023] [Accepted: 07/13/2023] [Indexed: 07/21/2023]
Abstract
An odor plume is composed of fine filamentous structures interspersed by clean air. Various animals use bilateral comparison with paired olfactory organs for detecting spatial and temporal features of the plume. American cockroaches are capable of locating a sex pheromone source with one long antenna spanning 5 cm, so-called unilateral odor sampling. This capability stems from an antennotopic map in which olfactory sensory neurons located proximo-distally in the antenna send axon terminals proximo-distally in a given glomerulus, relative to axonal entry points. Multiple output neurons (projection neurons) utilize this spatial map in the pheromone-receptive glomerulus. Here, I summarize neuronal underpinnings of receptive field formation, development, and how this intraglomerular spatial map can be utilized for odor localization.
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Affiliation(s)
- Hiroshi Nishino
- Research Institute for Electronic Science, Hokkaido University, Sapporo, 060-0812, Japan.
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11
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Sizemore TR, Jonaitis J, Dacks AM. Heterogeneous receptor expression underlies non-uniform peptidergic modulation of olfaction in Drosophila. Nat Commun 2023; 14:5280. [PMID: 37644052 PMCID: PMC10465596 DOI: 10.1038/s41467-023-41012-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/02/2023] [Accepted: 08/21/2023] [Indexed: 08/31/2023] Open
Abstract
Sensory systems are dynamically adjusted according to the animal's ongoing needs by neuromodulators, such as neuropeptides. Neuropeptides are often widely-distributed throughout sensory networks, but it is unclear whether such neuropeptides uniformly modulate network activity. Here, we leverage the Drosophila antennal lobe (AL) to resolve whether myoinhibitory peptide (MIP) uniformly modulates AL processing. Despite being uniformly distributed across the AL, MIP decreases olfactory input to some glomeruli, while increasing olfactory input to other glomeruli. We reveal that a heterogeneous ensemble of local interneurons (LNs) are the sole source of AL MIP, and show that differential expression of the inhibitory MIP receptor across glomeruli allows MIP to act on distinct intraglomerular substrates. Our findings demonstrate how even a seemingly simple case of modulation can have complex consequences on network processing by acting non-uniformly within different components of the overall network.
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Affiliation(s)
- Tyler R Sizemore
- Department of Biology, Life Sciences Building, West Virginia University, Morgantown, WV, 26506, USA.
- Department of Molecular, Cellular, and Developmental Biology, Yale Science Building, Yale University, New Haven, CT, 06520-8103, USA.
| | - Julius Jonaitis
- Department of Biology, Life Sciences Building, West Virginia University, Morgantown, WV, 26506, USA
| | - Andrew M Dacks
- Department of Biology, Life Sciences Building, West Virginia University, Morgantown, WV, 26506, USA.
- Department of Neuroscience, West Virginia University, Morgantown, WV, 26506, USA.
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12
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Ellis KE, Bervoets S, Smihula H, Ganguly I, Vigato E, Auer TO, Benton R, Litwin-Kumar A, Caron SJC. Evolution of connectivity architecture in the Drosophila mushroom body. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2023:2023.02.10.528036. [PMID: 36798335 PMCID: PMC9934700 DOI: 10.1101/2023.02.10.528036] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/16/2023]
Abstract
Brain evolution has primarily been studied at the macroscopic level by comparing the relative size of homologous brain centers between species. How neuronal circuits change at the cellular level over evolutionary time remains largely unanswered. Here, using a phylogenetically informed framework, we compare the olfactory circuits of three closely related Drosophila species that differ radically in their chemical ecology: the generalists Drosophila melanogaster and Drosophila simulans that feed on fermenting fruit, and Drosophila sechellia that specializes on ripe noni fruit. We examine a central part of the olfactory circuit that has not yet been investigated in these species - the connections between the projection neurons of the antennal lobe and the Kenyon cells of the mushroom body, an associative brain center - to identify species-specific connectivity patterns. We found that neurons encoding food odors - the DC3 neurons in D. melanogaster and D. simulans and the DL2d neurons in D. sechellia - connect more frequently with Kenyon cells, giving rise to species-specific biases in connectivity. These species-specific differences in connectivity reflect two distinct neuronal phenotypes: in the number of projection neurons or in the number of presynaptic boutons formed by individual projection neurons. Finally, behavioral analyses suggest that such increased connectivity enhances learning performance in an associative task. Our study shows how fine-grained aspects of connectivity architecture in an associative brain center can change during evolution to reflect the chemical ecology of a species.
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13
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Talross GJS, Carlson JR. The rich non-coding RNA landscape of the Drosophila antenna. Cell Rep 2023; 42:112482. [PMID: 37167060 PMCID: PMC10431215 DOI: 10.1016/j.celrep.2023.112482] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/09/2023] [Revised: 03/07/2023] [Accepted: 04/20/2023] [Indexed: 05/13/2023] Open
Abstract
Emerging evidence suggests that long non-coding RNAs (lncRNAs) play diverse and critical roles in neural development, function, and disease. Here, we examine neuronal lncRNAs in a model system that offers enormous advantages for deciphering their functions: the Drosophila olfactory system. This system is numerically simple, its neurons are exquisitely well defined, and it drives multiple complex behaviors. We undertake a comprehensive survey of linear and circular lncRNAs in the Drosophila antenna and identify a wealth of lncRNAs enriched in it. We generate an unprecedented lncRNA-to-neuron map, which reveals that olfactory receptor neurons are defined not only by their receptors but also by the combination of lncRNAs they express. We identify species-specific lncRNAs, including many that are expressed primarily in pheromone-sensing neurons and that may act in modulation of pheromonal responses or in speciation. This resource opens many new opportunities for investigating the roles of lncRNAs in the nervous system.
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Affiliation(s)
- Gaëlle J S Talross
- Department of Molecular, Cellular and Developmental Biology, Yale University, New Haven, CT 06511, USA
| | - John R Carlson
- Department of Molecular, Cellular and Developmental Biology, Yale University, New Haven, CT 06511, USA.
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14
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Gugel ZV, Maurais EG, Hong EJ. Chronic exposure to odors at naturally occurring concentrations triggers limited plasticity in early stages of Drosophila olfactory processing. eLife 2023; 12:e85443. [PMID: 37195027 PMCID: PMC10229125 DOI: 10.7554/elife.85443] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/08/2022] [Accepted: 02/06/2023] [Indexed: 05/18/2023] Open
Abstract
In insects and mammals, olfactory experience in early life alters olfactory behavior and function in later life. In the vinegar fly Drosophila, flies chronically exposed to a high concentration of a monomolecular odor exhibit reduced behavioral aversion to the familiar odor when it is reencountered. This change in olfactory behavior has been attributed to selective decreases in the sensitivity of second-order olfactory projection neurons (PNs) in the antennal lobe that respond to the overrepresented odor. However, since odorant compounds do not occur at similarly high concentrations in natural sources, the role of odor experience-dependent plasticity in natural environments is unclear. Here, we investigated olfactory plasticity in the antennal lobe of flies chronically exposed to odors at concentrations that are typically encountered in natural odor sources. These stimuli were chosen to each strongly and selectively excite a single class of primary olfactory receptor neuron (ORN), thus facilitating a rigorous assessment of the selectivity of olfactory plasticity for PNs directly excited by overrepresented stimuli. Unexpectedly, we found that chronic exposure to three such odors did not result in decreased PN sensitivity but rather mildly increased responses to weak stimuli in most PN types. Odor-evoked PN activity in response to stronger stimuli was mostly unaffected by odor experience. When present, plasticity was observed broadly in multiple PN types and thus was not selective for PNs receiving direct input from the chronically active ORNs. We further investigated the DL5 olfactory coding channel and found that chronic odor-mediated excitation of its input ORNs did not affect PN intrinsic properties, local inhibitory innervation, ORN responses or ORN-PN synaptic strength; however, broad-acting lateral excitation evoked by some odors was increased. These results show that PN odor coding is only mildly affected by strong persistent activation of a single olfactory input, highlighting the stability of early stages of insect olfactory processing to significant perturbations in the sensory environment.
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Affiliation(s)
- Zhannetta V Gugel
- Division of Biology and Biological Engineering, California Institute of TechnologyPasadenaUnited States
| | - Elizabeth G Maurais
- Division of Biology and Biological Engineering, California Institute of TechnologyPasadenaUnited States
| | - Elizabeth J Hong
- Division of Biology and Biological Engineering, California Institute of TechnologyPasadenaUnited States
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15
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Lazar AA, Liu T, Yeh CH. The functional logic of odor information processing in the Drosophila antennal lobe. PLoS Comput Biol 2023; 19:e1011043. [PMID: 37083547 PMCID: PMC10156017 DOI: 10.1371/journal.pcbi.1011043] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2022] [Revised: 05/03/2023] [Accepted: 03/22/2023] [Indexed: 04/22/2023] Open
Abstract
Recent advances in molecular transduction of odorants in the Olfactory Sensory Neurons (OSNs) of the Drosophila Antenna have shown that the odorant object identity is multiplicatively coupled with the odorant concentration waveform. The resulting combinatorial neural code is a confounding representation of odorant semantic information (identity) and syntactic information (concentration). To distill the functional logic of odor information processing in the Antennal Lobe (AL) a number of challenges need to be addressed including 1) how is the odorant semantic information decoupled from the syntactic information at the level of the AL, 2) how are these two information streams processed by the diverse AL Local Neurons (LNs) and 3) what is the end-to-end functional logic of the AL? By analyzing single-channel physiology recordings at the output of the AL, we found that the Projection Neuron responses can be decomposed into a concentration-invariant component, and two transient components boosting the positive/negative concentration contrast that indicate onset/offset timing information of the odorant object. We hypothesized that the concentration-invariant component, in the multi-channel context, is the recovered odorant identity vector presented between onset/offset timing events. We developed a model of LN pathways in the Antennal Lobe termed the differential Divisive Normalization Processors (DNPs), which robustly extract the semantics (the identity of the odorant object) and the ON/OFF semantic timing events indicating the presence/absence of an odorant object. For real-time processing with spiking PN models, we showed that the phase-space of the biological spike generator of the PN offers an intuit perspective for the representation of recovered odorant semantics and examined the dynamics induced by the odorant semantic timing events. Finally, we provided theoretical and computational evidence for the functional logic of the AL as a robust ON-OFF odorant object identity recovery processor across odorant identities, concentration amplitudes and waveform profiles.
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Affiliation(s)
- Aurel A Lazar
- Department of Electrical Engineering, Columbia University, New York, NY, United States of America
| | - Tingkai Liu
- Department of Electrical Engineering, Columbia University, New York, NY, United States of America
| | - Chung-Heng Yeh
- Department of Electrical Engineering, Columbia University, New York, NY, United States of America
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16
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Benton R, Dahanukar A. Chemosensory Coding in Drosophila Single Sensilla. Cold Spring Harb Protoc 2023; 2023:107803-pdb.top. [PMID: 36446528 DOI: 10.1101/pdb.top107803] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/18/2023]
Abstract
The chemical senses-smell and taste-detect and discriminate an enormous diversity of environmental stimuli and provide fascinating but challenging models to investigate how sensory cues are represented in the brain. Important stimulus-coding events occur in peripheral sensory neurons, which express specific combinations of chemosensory receptors with defined ligand-response profiles. These receptors convert ligand recognition into spatial and temporal patterns of neural activity that are transmitted to, and interpreted in, central brain regions. Drosophila melanogaster provides an attractive model to study chemosensory coding because it possesses relatively simple peripheral olfactory and gustatory systems that display many organizational parallels to those of vertebrates. Moreover, nearly all peripheral chemosensory neurons have been molecularly characterized and are accessible for physiological analysis, as they are exposed on the surface of sensory organs housed in specialized hairs called sensilla. Here, we briefly review anatomical, molecular, and physiological properties of adult Drosophila olfactory and gustatory systems and provide background to methods for electrophysiological recordings of ligand-evoked activity from different types of chemosensory sensilla.
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Affiliation(s)
- Richard Benton
- Center for Integrative Genomics, Faculty of Biology and Medicine, University of Lausanne, CH-1015 Lausanne, Switzerland
| | - Anupama Dahanukar
- Department of Molecular, Cell & Systems Biology, University of California, Riverside, California 92521, USA
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17
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Benton R, Dahanukar A. Recording from Fly Olfactory Sensilla. Cold Spring Harb Protoc 2023; 2023:108063-pdb.prot. [PMID: 36446530 DOI: 10.1101/pdb.prot108063] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/05/2023]
Abstract
Olfactory systems detect and discriminate an enormous diversity of volatile environmental stimuli and provide important paradigms to investigate how sensory cues are represented in the brain. Key stimulus-coding events occur in peripheral olfactory sensory neurons, which typically express a single olfactory receptor-from a large repertoire encoded in the genome-with a defined ligand-response profile. These receptors convert odor ligand recognition into spatial and temporal patterns of neural activity that are transmitted to, and interpreted in, central brain regions. Drosophila provides an attractive model to study olfactory coding because it possesses a relatively simple peripheral olfactory system that displays many organizational parallels to those of vertebrates. Moreover, nearly all olfactory sensory neurons have been molecularly characterized and are accessible for physiological analysis, as they are exposed on the surface of sensory organs (antennae and maxillary palps) housed in specialized hairs called sensilla. This protocol describes how to perform recordings of odor-evoked activity from Drosophila olfactory sensilla, covering the basics of sample preparation, setting up the electrophysiology rig, assembling an odor stimulus-delivery device, and data analysis. The methodology can be used to characterize the ligand-recognition properties of most olfactory sensory neurons and the role of olfactory receptors (and other molecular components) in signal transduction.
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Affiliation(s)
- Richard Benton
- Center for Integrative Genomics, Faculty of Biology and Medicine, University of Lausanne, CH-1015, Lausanne, Switzerland
| | - Anupama Dahanukar
- Department of Molecular, Cell & Systems Biology, University of California, Riverside, California 92521, USA
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18
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Ahmed M, Rajagopalan AE, Pan Y, Li Y, Williams DL, Pedersen EA, Thakral M, Previero A, Close KC, Christoforou CP, Cai D, Turner GC, Clowney EJ. Hacking brain development to test models of sensory coding. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2023:2023.01.25.525425. [PMID: 36747712 PMCID: PMC9900841 DOI: 10.1101/2023.01.25.525425] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
Abstract
Animals can discriminate myriad sensory stimuli but can also generalize from learned experience. You can probably distinguish the favorite teas of your colleagues while still recognizing that all tea pales in comparison to coffee. Tradeoffs between detection, discrimination, and generalization are inherent at every layer of sensory processing. During development, specific quantitative parameters are wired into perceptual circuits and set the playing field on which plasticity mechanisms play out. A primary goal of systems neuroscience is to understand how material properties of a circuit define the logical operations-computations--that it makes, and what good these computations are for survival. A cardinal method in biology-and the mechanism of evolution--is to change a unit or variable within a system and ask how this affects organismal function. Here, we make use of our knowledge of developmental wiring mechanisms to modify hard-wired circuit parameters in the Drosophila melanogaster mushroom body and assess the functional and behavioral consequences. By altering the number of expansion layer neurons (Kenyon cells) and their dendritic complexity, we find that input number, but not cell number, tunes odor selectivity. Simple odor discrimination performance is maintained when Kenyon cell number is reduced and augmented by Kenyon cell expansion.
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Affiliation(s)
- Maria Ahmed
- Department of Molecular, Cellular and Developmental Biology, University of Michigan, Ann Arbor, MI 48109, USA
| | - Adithya E. Rajagopalan
- Howard Hughes Medical Institute, Janelia Research Campus, Ashburn, VA 20147, USA
- The Solomon H. Snyder Department of Neuroscience, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA
| | - Yijie Pan
- Department of Molecular, Cellular and Developmental Biology, University of Michigan, Ann Arbor, MI 48109, USA
| | - Ye Li
- Department of Cell and Developmental Biology, University of Michigan, Ann Arbor, MI 48104, USA
| | - Donnell L. Williams
- Department of Molecular, Cellular and Developmental Biology, University of Michigan, Ann Arbor, MI 48109, USA
| | - Erik A. Pedersen
- Department of Molecular, Cellular and Developmental Biology, University of Michigan, Ann Arbor, MI 48109, USA
| | - Manav Thakral
- Department of Molecular, Cellular and Developmental Biology, University of Michigan, Ann Arbor, MI 48109, USA
| | - Angelica Previero
- Department of Molecular, Cellular and Developmental Biology, University of Michigan, Ann Arbor, MI 48109, USA
| | - Kari C. Close
- Howard Hughes Medical Institute, Janelia Research Campus, Ashburn, VA 20147, USA
| | | | - Dawen Cai
- Department of Cell and Developmental Biology, University of Michigan, Ann Arbor, MI 48104, USA
- Biophysics LS&A, University of Michigan, Ann Arbor, MI 48109, United States
- Michigan Neuroscience Institute Affiliate
| | - Glenn C. Turner
- Howard Hughes Medical Institute, Janelia Research Campus, Ashburn, VA 20147, USA
| | - E. Josephine Clowney
- Department of Molecular, Cellular and Developmental Biology, University of Michigan, Ann Arbor, MI 48109, USA
- Michigan Neuroscience Institute Affiliate
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Synaptic Development in Diverse Olfactory Neuron Classes Uses Distinct Temporal and Activity-Related Programs. J Neurosci 2023; 43:28-55. [PMID: 36446587 PMCID: PMC9838713 DOI: 10.1523/jneurosci.0884-22.2022] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/12/2022] [Revised: 10/18/2022] [Accepted: 11/02/2022] [Indexed: 12/03/2022] Open
Abstract
Developing neurons must meet core molecular, cellular, and temporal requirements to ensure the correct formation of synapses, resulting in functional circuits. However, because of the vast diversity in neuronal class and function, it is unclear whether or not all neurons use the same organizational mechanisms to form synaptic connections and achieve functional and morphologic maturation. Moreover, it remains unknown whether neurons united in a common goal and comprising the same sensory circuit develop on similar timescales and use identical molecular approaches to ensure the formation of the correct number of synapses. To begin to answer these questions, we took advantage of the Drosophila antennal lobe (AL), a model olfactory circuit with remarkable genetic access and synapse-level resolution. Using tissue-specific genetic labeling of active zones, we performed a quantitative analysis of synapse formation in multiple classes of neurons of both sexes throughout development and adulthood. We found that olfactory receptor neurons (ORNs), projection neurons (PNs), and local interneurons (LNs) each have unique time courses of synaptic development, addition, and refinement, demonstrating that each class follows a distinct developmental program. This raised the possibility that these classes may also have distinct molecular requirements for synapse formation. We genetically altered neuronal activity in each neuronal subtype and observed differing effects on synapse number based on the neuronal class examined. Silencing neuronal activity in ORNs, PNs, and LNs impaired synaptic development but only in ORNs did enhancing neuronal activity influence synapse formation. ORNs and LNs demonstrated similar impairment of synaptic development with enhanced activity of a master kinase, GSK-3β, suggesting that neuronal activity and GSK-3β kinase activity function in a common pathway. ORNs also, however, demonstrated impaired synaptic development with GSK-3β loss-of-function, suggesting additional activity-independent roles in development. Ultimately, our results suggest that the requirements for synaptic development are not uniform across all neuronal classes with considerable diversity existing in both their developmental time frames and molecular requirements. These findings provide novel insights into the mechanisms of synaptic development and lay the foundation for future work determining their underlying etiologies.SIGNIFICANCE STATEMENT Distinct olfactory neuron classes in Drosophila develop a mature synaptic complement over unique timelines and using distinct activity-dependent and molecular programs, despite having the same generalized goal of olfactory sensation.
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Abstract
Among the many wonders of nature, the sense of smell of the fly Drosophila melanogaster might seem, at first glance, of esoteric interest. Nevertheless, for over a century, the 'nose' of this insect has been an extraordinary system to explore questions in animal behaviour, ecology and evolution, neuroscience, physiology and molecular genetics. The insights gained are relevant for our understanding of the sensory biology of vertebrates, including humans, and other insect species, encompassing those detrimental to human health. Here, I present an overview of our current knowledge of D. melanogaster olfaction, from molecules to behaviours, with an emphasis on the historical motivations of studies and illustration of how technical innovations have enabled advances. I also highlight some of the pressing and long-term questions.
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Affiliation(s)
- Richard Benton
- Center for Integrative Genomics, Faculty of Biology and Medicine, University of Lausanne, CH-1015 Lausanne, Switzerland
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21
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Scalzotto M, Ng R, Cruchet S, Saina M, Armida J, Su CY, Benton R. Pheromone sensing in Drosophila requires support cell-expressed Osiris 8. BMC Biol 2022; 20:230. [PMID: 36217142 PMCID: PMC9552441 DOI: 10.1186/s12915-022-01425-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/15/2022] [Accepted: 09/29/2022] [Indexed: 11/16/2022] Open
Abstract
Background The nose of most animals comprises multiple sensory subsystems, which are defined by the expression of different olfactory receptor families. Drosophila melanogaster antennae contain two morphologically and functionally distinct subsystems that express odorant receptors (Ors) or ionotropic receptors (Irs). Although these receptors have been thoroughly characterized in this species, the subsystem-specific expression and roles of other genes are much less well-understood. Results Here we generate subsystem-specific transcriptomic datasets to identify hundreds of genes, encoding diverse protein classes, that are selectively enriched in either Or or Ir subsystems. Using single-cell antennal transcriptomic data and RNA in situ hybridization, we find that most neuronal genes—other than sensory receptor genes—are broadly expressed within the subsystems. By contrast, we identify many non-neuronal genes that exhibit highly selective expression, revealing substantial molecular heterogeneity in the non-neuronal cellular components of the olfactory subsystems. We characterize one Or subsystem-specific non-neuronal molecule, Osiris 8 (Osi8), a conserved member of a large, insect-specific family of transmembrane proteins. Osi8 is expressed in the membranes of tormogen support cells of pheromone-sensing trichoid sensilla. Loss of Osi8 does not have obvious impact on trichoid sensillar development or basal neuronal activity, but abolishes high sensitivity responses to pheromone ligands. Conclusions This work identifies a new protein required for insect pheromone detection, emphasizes the importance of support cells in neuronal sensory functions, and provides a resource for future characterization of other olfactory subsystem-specific genes. Supplementary Information The online version contains supplementary material available at 10.1186/s12915-022-01425-w.
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Affiliation(s)
- Marta Scalzotto
- Center for Integrative Genomics, Faculty of Biology and Medicine, University of Lausanne, CH-1015, Lausanne, Switzerland
| | - Renny Ng
- Neurobiology Section, Division of Biological Sciences, University of California San Diego, La Jolla, CA, 92093, USA
| | - Steeve Cruchet
- Center for Integrative Genomics, Faculty of Biology and Medicine, University of Lausanne, CH-1015, Lausanne, Switzerland
| | - Michael Saina
- Center for Integrative Genomics, Faculty of Biology and Medicine, University of Lausanne, CH-1015, Lausanne, Switzerland
| | - Jan Armida
- Center for Integrative Genomics, Faculty of Biology and Medicine, University of Lausanne, CH-1015, Lausanne, Switzerland
| | - Chih-Ying Su
- Neurobiology Section, Division of Biological Sciences, University of California San Diego, La Jolla, CA, 92093, USA
| | - Richard Benton
- Center for Integrative Genomics, Faculty of Biology and Medicine, University of Lausanne, CH-1015, Lausanne, Switzerland.
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22
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Keesey IW. Sensory neuroecology and multimodal evolution across the genus Drosophila. Front Ecol Evol 2022. [DOI: 10.3389/fevo.2022.932344] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
The neural basis and genetic mechanisms for sensory evolution are increasingly being explored in depth across many closely related members of the Drosophila genus. This has, in part, been achieved due to the immense efforts toward adapting gene-editing technologies for additional, non-model species. Studies targeting both peripheral sensory variations, as well as interspecies divergence in coding or neural connectivity, have generated numerous, tangible examples of how and where the evolution of sensory-driven animal behavior has occurred. Here, we review and discuss studies that each aim to identify the neurobiological and genetic components of sensory system evolution to provide a comparative overview of the types of functional variations observed across both perceptual input and behavioral output. In addition, we examined the roles neuroecology and neuroevolution play in speciation events, such as courtship and intraspecies communication, as well as those aspects related to behavioral divergence in host navigation or egg-laying preferences. Through the investigation of comparative, large-scale trends and correlations across diverse, yet closely related species within this highly ecologically variable genus of flies, we can begin to describe the underlying pressures, mechanisms, and constraints that have guided sensory and nervous system evolution within the natural environments of these organisms.
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23
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Duhart JC, Mosca TJ. Genetic regulation of central synapse formation and organization in Drosophila melanogaster. Genetics 2022; 221:6597078. [PMID: 35652253 DOI: 10.1093/genetics/iyac078] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/14/2022] [Accepted: 04/29/2022] [Indexed: 01/04/2023] Open
Abstract
A goal of modern neuroscience involves understanding how connections in the brain form and function. Such a knowledge is essential to inform how defects in the exquisite complexity of nervous system growth influence neurological disease. Studies of the nervous system in the fruit fly Drosophila melanogaster enabled the discovery of a wealth of molecular and genetic mechanisms underlying development of synapses-the specialized cell-to-cell connections that comprise the essential substrate for information flow and processing in the nervous system. For years, the major driver of knowledge was the neuromuscular junction due to its ease of examination. Analogous studies in the central nervous system lagged due to a lack of genetic accessibility of specific neuron classes, synaptic labels compatible with cell-type-specific access, and high resolution, quantitative imaging strategies. However, understanding how central synapses form remains a prerequisite to understanding brain development. In the last decade, a host of new tools and techniques extended genetic studies of synapse organization into central circuits to enhance our understanding of synapse formation, organization, and maturation. In this review, we consider the current state-of-the-field. We first discuss the tools, technologies, and strategies developed to visualize and quantify synapses in vivo in genetically identifiable neurons of the Drosophila central nervous system. Second, we explore how these tools enabled a clearer understanding of synaptic development and organization in the fly brain and the underlying molecular mechanisms of synapse formation. These studies establish the fly as a powerful in vivo genetic model that offers novel insights into neural development.
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Affiliation(s)
- Juan Carlos Duhart
- Department of Neuroscience, Vickie and Jack Farber Institute of Neuroscience, Thomas Jefferson University, Philadelphia, PA 19107, USA
| | - Timothy J Mosca
- Department of Neuroscience, Vickie and Jack Farber Institute of Neuroscience, Thomas Jefferson University, Philadelphia, PA 19107, USA
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Fleischer J, Rausch A, Dietze K, Erler S, Cassau S, Krieger J. A small number of male-biased candidate pheromone receptors are expressed in large subsets of the olfactory sensory neurons in the antennae of drones from the European honey bee Apis mellifera. INSECT SCIENCE 2022; 29:749-766. [PMID: 34346151 DOI: 10.1111/1744-7917.12960] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/21/2021] [Revised: 07/21/2021] [Accepted: 07/29/2021] [Indexed: 06/13/2023]
Abstract
In the European honey bee (Apis mellifera), the olfactory system is essential for foraging and intraspecific communication via pheromones. Honey bees are equipped with a large repertoire of olfactory receptors belonging to the insect odorant receptor (OR) family. Previous studies have indicated that the transcription level of a few OR types including OR11, a receptor activated by the queen-released pheromone compound (2E)-9-oxodecenoic acid (9-ODA), is significantly higher in the antenna of males (drones) than in female workers. However, the number and distribution of antennal cells expressing male-biased ORs is elusive. Here, we analyzed antennal sections from bees by in situ hybridization for the expression of the male-biased receptors OR11, OR18, and OR170. Our results demonstrate that these receptors are expressed in only moderate numbers of cells in the antennae of females (workers and queens), whereas substantially higher cell numbers express these ORs in drones. Thus, the reported male-biased transcript levels are due to sex-specific differences in the number of antennal cells expressing these receptors. Detailed analyses for OR11 and OR18 in drone antennae revealed expression in two distinct subsets of olfactory sensory neurons (OSNs) that in total account for approximately 69% of the OR-positive cells. Such high percentages of OSNs expressing given receptors are reminiscent of male-biased ORs in moths that mediate the detection of female-released sex pheromone components. Collectively, our findings indicate remarkable similarities between male antennae of bees and moths and support the concept that male-biased ORs in bee drones serve the detection of female-emitted sex pheromones.
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Affiliation(s)
- Joerg Fleischer
- Martin Luther University Halle-Wittenberg, Institute of Biology/Zoology, Department of Animal Physiology, Halle (Saale)
| | - Alexander Rausch
- Martin Luther University Halle-Wittenberg, Institute of Biology/Zoology, Department of Animal Physiology, Halle (Saale)
| | - Kathrin Dietze
- Martin Luther University Halle-Wittenberg, Institute of Biology/Zoology, Department of Animal Physiology, Halle (Saale)
| | - Silvio Erler
- Institute for Bee Protection, Julius Kühn Institute (JKI)-Federal Research Centre for Cultivated Plants, Braunschweig, Germany
| | - Sina Cassau
- Martin Luther University Halle-Wittenberg, Institute of Biology/Zoology, Department of Animal Physiology, Halle (Saale)
| | - Jürgen Krieger
- Martin Luther University Halle-Wittenberg, Institute of Biology/Zoology, Department of Animal Physiology, Halle (Saale)
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25
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Chen ZL, Huang C, Li XS, Li GC, Yu TH, Fu GJ, Zhang X, Song C, Bai PH, Cao L, Qian WQ, Wan FH, Han RC, Tang R. Behavioural regulator and molecular reception of a double-edge-sword hunter beetle. PEST MANAGEMENT SCIENCE 2022; 78:2693-2703. [PMID: 35388600 DOI: 10.1002/ps.6901] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/20/2021] [Revised: 03/26/2022] [Accepted: 04/06/2022] [Indexed: 06/14/2023]
Abstract
BACKGROUND The black carabid beetle Calosoma maximoviczi is a successful predator that serves as both a beneficial insect and a severe threat to economic herbivores. Its hunting technique relies heavily on olfaction, but the underlying mechanism has not been studied. Here, we report the electrophysiological, ecological and molecular traits of bioactive components identified from a comprehensive panel of natural odorants in the beetle-prey-plant system. The aim of this work was to investigate olfactory perceptions and their influence on the behaviours of C. maximoviczi. RESULTS Among the 200 identified volatiles, 18 were concentrated in beetle and prey samples, and 14 were concentrated in plants. Insect feeding damage to plants led to a shift in the emission fingerprint. Twelve volatiles were selected using successive electrophysiological tests. Field trials showed that significant sex differences existed when trapping with a single chemical or chemical mixture. Expression profiles indicated that sex-biased catches were related to the expression of 15 annotated CmaxOBPs and 40 CmaxORs across 12 chemosensory organs. In silico evaluations were conducted with 16 CmaxORs using modelling and docking. Better recognition was predicted for the pairs CmaxOR5-(Z)-3-hexenyl acetate, CmaxOR6-β-caryophyllene, CmaxOR18-(E)-β-ocimene and CmaxOR18-tetradecane, with higher binding affinity and a suitable binding pocket. Lastly, 168Y in CmaxOR6 and 142Y in CmaxOR18 were predicted as key amino acid residues for binding β-caryophyllene and tetradecane, respectively. CONCLUSION This work provides an example pipeline for de novo investigation in C. maximoviczi baits and the underlying olfactory perceptions. The results will benefit the future development of trapping-based integrated pest management strategies and the deorphanization of odorant receptors in ground beetles. © 2022 Society of Chemical Industry.
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Affiliation(s)
- Zeng-Liang Chen
- Sericultural Institute of Liaoning Province, Fengcheng, China
| | - Cong Huang
- Shenzhen Branch, Guangdong Laboratory for Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen, China
| | - Xi-Sheng Li
- Sericultural Institute of Liaoning Province, Fengcheng, China
| | - Guo-Cheng Li
- State Key Laboratory of Integrated Management of Pest Insects and Rodents, Institute of Zoology, Chinese Academy of Sciences, Beijing, China
| | - Ting-Hong Yu
- Sericultural Institute of Liaoning Province, Fengcheng, China
| | - Guan-Jun Fu
- Shenzhen Branch, Guangdong Laboratory for Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen, China
- College of Plant Health and Medicine, Qingdao Agricultural University, Qingdao, China
| | - Xue Zhang
- Shenzhen Branch, Guangdong Laboratory for Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen, China
- College of Plant Health and Medicine, Qingdao Agricultural University, Qingdao, China
| | - Ce Song
- Sericultural Institute of Liaoning Province, Fengcheng, China
| | - Peng-Hua Bai
- Institute of Plant Protection, Tianjin Academy of Agricultural Sciences, Tianjin, China
| | - Li Cao
- Guangdong Key Laboratory of Animal Conservation and Resource Utilization, Guangdong Public Laboratory of Wild Animal Conservation and Utilization, Institute of Zoology, Guangdong Academy of Sciences, Guangzhou, China
| | - Wan-Qiang Qian
- Shenzhen Branch, Guangdong Laboratory for Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen, China
| | - Fang-Hao Wan
- Shenzhen Branch, Guangdong Laboratory for Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen, China
- College of Plant Health and Medicine, Qingdao Agricultural University, Qingdao, China
- State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing, China
| | - Ri-Chou Han
- Guangdong Key Laboratory of Animal Conservation and Resource Utilization, Guangdong Public Laboratory of Wild Animal Conservation and Utilization, Institute of Zoology, Guangdong Academy of Sciences, Guangzhou, China
| | - Rui Tang
- Guangdong Key Laboratory of Animal Conservation and Resource Utilization, Guangdong Public Laboratory of Wild Animal Conservation and Utilization, Institute of Zoology, Guangdong Academy of Sciences, Guangzhou, China
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26
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Keesey IW, Zhang J, Depetris-Chauvin A, Obiero GF, Gupta A, Gupta N, Vogel H, Knaden M, Hansson BS. Functional olfactory evolution in Drosophila suzukii and the subgenus Sophophora. iScience 2022; 25:104212. [PMID: 35573203 PMCID: PMC9093017 DOI: 10.1016/j.isci.2022.104212] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/21/2020] [Revised: 02/24/2022] [Accepted: 04/04/2022] [Indexed: 10/25/2022] Open
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Rihani K, Sachse S. Shedding Light on Inter-Individual Variability of Olfactory Circuits in Drosophila. Front Behav Neurosci 2022; 16:835680. [PMID: 35548690 PMCID: PMC9084309 DOI: 10.3389/fnbeh.2022.835680] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2021] [Accepted: 03/29/2022] [Indexed: 12/25/2022] Open
Abstract
Inter-individual differences in behavioral responses, anatomy or functional properties of neuronal populations of animals having the same genotype were for a long time disregarded. The majority of behavioral studies were conducted at a group level, and usually the mean behavior of all individuals was considered. Similarly, in neurophysiological studies, data were pooled and normalized from several individuals. This approach is mostly suited to map and characterize stereotyped neuronal properties between individuals, but lacks the ability to depict inter-individual variability regarding neuronal wiring or physiological characteristics. Recent studies have shown that behavioral biases and preferences to olfactory stimuli can vary significantly among individuals of the same genotype. The origin and the benefit of these diverse “personalities” is still unclear and needs to be further investigated. A perspective taken into account the inter-individual differences is needed to explore the cellular mechanisms underlying this phenomenon. This review focuses on olfaction in the vinegar fly Drosophila melanogaster and summarizes previous and recent studies on odor-guided behavior and the underlying olfactory circuits in the light of inter-individual variability. We address the morphological and physiological variabilities present at each layer of the olfactory circuitry and attempt to link them to individual olfactory behavior. Additionally, we discuss the factors that might influence individuality with regard to olfactory perception.
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Affiliation(s)
- Karen Rihani
- Research Group Olfactory Coding, Max Planck Institute for Chemical Ecology, Jena, Germany
- Max Planck Center Next Generation Insect Chemical Ecology, Jena, Germany
| | - Silke Sachse
- Research Group Olfactory Coding, Max Planck Institute for Chemical Ecology, Jena, Germany
- Max Planck Center Next Generation Insect Chemical Ecology, Jena, Germany
- *Correspondence: Silke Sachse,
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Task D, Lin CC, Vulpe A, Afify A, Ballou S, Brbic M, Schlegel P, Raji J, Jefferis GSXE, Li H, Menuz K, Potter CJ. Chemoreceptor co-expression in Drosophila melanogaster olfactory neurons. eLife 2022; 11:e72599. [PMID: 35442190 PMCID: PMC9020824 DOI: 10.7554/elife.72599] [Citation(s) in RCA: 49] [Impact Index Per Article: 24.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/28/2021] [Accepted: 03/07/2022] [Indexed: 12/20/2022] Open
Abstract
Drosophila melanogaster olfactory neurons have long been thought to express only one chemosensory receptor gene family. There are two main olfactory receptor gene families in Drosophila, the odorant receptors (ORs) and the ionotropic receptors (IRs). The dozens of odorant-binding receptors in each family require at least one co-receptor gene in order to function: Orco for ORs, and Ir25a, Ir8a, and Ir76b for IRs. Using a new genetic knock-in strategy, we targeted the four co-receptors representing the main chemosensory families in D. melanogaster (Orco, Ir8a, Ir76b, Ir25a). Co-receptor knock-in expression patterns were verified as accurate representations of endogenous expression. We find extensive overlap in expression among the different co-receptors. As defined by innervation into antennal lobe glomeruli, Ir25a is broadly expressed in 88% of all olfactory sensory neuron classes and is co-expressed in 82% of Orco+ neuron classes, including all neuron classes in the maxillary palp. Orco, Ir8a, and Ir76b expression patterns are also more expansive than previously assumed. Single sensillum recordings from Orco-expressing Ir25a mutant antennal and palpal neurons identify changes in olfactory responses. We also find co-expression of Orco and Ir25a in Drosophila sechellia and Anopheles coluzzii olfactory neurons. These results suggest that co-expression of chemosensory receptors is common in insect olfactory neurons. Together, our data present the first comprehensive map of chemosensory co-receptor expression and reveal their unexpected widespread co-expression in the fly olfactory system.
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Affiliation(s)
- Darya Task
- The Solomon H. Snyder Department of Neuroscience, Center for Sensory Biology, Johns Hopkins University School of MedicineBaltimoreUnited States
| | - Chun-Chieh Lin
- The Solomon H. Snyder Department of Neuroscience, Center for Sensory Biology, Johns Hopkins University School of MedicineBaltimoreUnited States
- Mortimer B. Zuckermann Mind Brain Behavior Institute, Columbia UniversityNew YorkUnited States
| | - Alina Vulpe
- Physiology & Neurobiology Department, University of ConnecticutMansfieldUnited States
| | - Ali Afify
- The Solomon H. Snyder Department of Neuroscience, Center for Sensory Biology, Johns Hopkins University School of MedicineBaltimoreUnited States
| | - Sydney Ballou
- Physiology & Neurobiology Department, University of ConnecticutMansfieldUnited States
| | - Maria Brbic
- Department of Computer Science, Stanford UniversityStanfordUnited States
| | - Philipp Schlegel
- Drosophila Connectomics Group, Department of Zoology, University of CambridgeCambridgeUnited Kingdom
| | - Joshua Raji
- The Solomon H. Snyder Department of Neuroscience, Center for Sensory Biology, Johns Hopkins University School of MedicineBaltimoreUnited States
| | - Gregory SXE Jefferis
- Drosophila Connectomics Group, Department of Zoology, University of CambridgeCambridgeUnited Kingdom
- Neurobiology Division, MRC Laboratory of Molecular BiologyCambridgeUnited Kingdom
| | - Hongjie Li
- Department of Biology, Howard Hughes Medical Institute, Stanford UniversityStanfordUnited States
| | - Karen Menuz
- Physiology & Neurobiology Department, University of ConnecticutMansfieldUnited States
| | - Christopher J Potter
- The Solomon H. Snyder Department of Neuroscience, Center for Sensory Biology, Johns Hopkins University School of MedicineBaltimoreUnited States
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Borrero-Echeverry F, Solum M, Trona F, Becher PG, Wallin EA, Bengtsson M, Witzgall P, Lebreton S. The female sex pheromone (Z)-4-undecenal mediates flight attraction and courtship in Drosophila melanogaster. JOURNAL OF INSECT PHYSIOLOGY 2022; 137:104355. [PMID: 35007554 DOI: 10.1016/j.jinsphys.2022.104355] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/02/2021] [Revised: 10/24/2021] [Accepted: 01/04/2022] [Indexed: 06/14/2023]
Abstract
Specific mate communication and recognition underlies reproduction and hence speciation. Our study provides new insights in Drosophila melanogaster premating olfactory communication. Mate communication evolves during adaptation to ecological niches and makes use of social signals and habitat cues. Female-produced, species-specific volatile pheromone (Z)-4-undecenal (Z4-11Al) and male pheromone (Z)-11-octadecenyl acetate (cVA) interact with food odour in a sex-specific manner. Furthermore, Z4-11Al, which mediates upwind flight attraction in both sexes, also elicits courtship in experienced males. Two isoforms of the olfactory receptor Or69a are co-expressed in the same olfactory sensory neurons. Z4-11Al is perceived via Or69aB, while the food odorant (R)-linalool is a main ligand for the other variant, Or69aA. However, only Z4-11Al mediates courtship in experienced males, not (R)-linalool. Behavioural discrimination is reflected by calcium imaging of the antennal lobe, showing distinct glomerular activation patterns by these two compounds. Male sex pheromone cVA is known to affect male and female courtship at close range, but does not elicit upwind flight attraction as a single compound, in contrast to Z4-11Al. A blend of the food odour vinegar and cVA attracted females, while a blend of vinegar and female pheromone Z4-11Al attracted males, instead. Sex-specific upwind flight attraction to blends of food volatiles and male and female pheromone, respectively, adds a new element to Drosophila olfactory premating communication and is an unambiguous paradigm for identifying the behaviourally active components, towards a more complete concept of food-pheromone odour objects.
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Affiliation(s)
- Felipe Borrero-Echeverry
- Chemical Ecology Unit, Department of Plant Protection Biology, Swedish University of Agricultural Sciences, 230 53 Alnarp, Sweden; Corporación Colombiana de Investgación Agropecuaria, Agrosavia, Mosquera, Colombia
| | - Marit Solum
- Chemical Ecology Unit, Department of Plant Protection Biology, Swedish University of Agricultural Sciences, 230 53 Alnarp, Sweden
| | - Federica Trona
- Chemical Ecology Unit, Department of Plant Protection Biology, Swedish University of Agricultural Sciences, 230 53 Alnarp, Sweden
| | - Paul G Becher
- Chemical Ecology Unit, Department of Plant Protection Biology, Swedish University of Agricultural Sciences, 230 53 Alnarp, Sweden
| | - Erika A Wallin
- Department of Chemical Engineering, Mid Sweden University, Holmgatan 10, 85170 Sundsvall, Sweden
| | - Marie Bengtsson
- Chemical Ecology Unit, Department of Plant Protection Biology, Swedish University of Agricultural Sciences, 230 53 Alnarp, Sweden
| | - Peter Witzgall
- Chemical Ecology Unit, Department of Plant Protection Biology, Swedish University of Agricultural Sciences, 230 53 Alnarp, Sweden.
| | - Sebastien Lebreton
- Chemical Ecology Unit, Department of Plant Protection Biology, Swedish University of Agricultural Sciences, 230 53 Alnarp, Sweden; IRSEA, Research Institute for Semiochemistry and Applied Ethology, Quartier Salignan, 84400 Apt, France
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30
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Drosophila melanogaster Chemosensory Pathways as Potential Targets to Curb the Insect Menace. INSECTS 2022; 13:insects13020142. [PMID: 35206716 PMCID: PMC8874460 DOI: 10.3390/insects13020142] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/06/2021] [Revised: 01/19/2022] [Accepted: 01/25/2022] [Indexed: 11/17/2022]
Abstract
Simple Summary The perception and processing of chemosensory stimuli are indispensable to the survival of living organisms. In insects, olfaction and gustation play a critical role in seeking food, finding mates and avoiding signs of danger. This review aims to present updated information about olfactory and gustatory signaling in the fruit fly Drosophila melanogaster. We have described the mechanisms involved in olfactory and gustatory perceptions at the molecular level, the receptors along with the allied molecules involved, and their signaling pathways in the fruit fly. Due to the magnifying problems of disease-causing insect vectors and crop pests, the applications of chemosensory signaling in controlling pests and insect vectors are also discussed. Abstract From a unicellular bacterium to a more complex human, smell and taste form an integral part of the basic sensory system. In fruit flies Drosophila melanogaster, the behavioral responses to odorants and tastants are simple, though quite sensitive, and robust. They explain the organization and elementary functioning of the chemosensory system. Molecular and functional analyses of the receptors and other critical molecules involved in olfaction and gustation are not yet completely understood. Hence, a better understanding of chemosensory cue-dependent fruit flies, playing a major role in deciphering the host-seeking behavior of pathogen transmitting insect vectors (mosquitoes, sandflies, ticks) and crop pests (Drosophila suzukii, Queensland fruit fly), is needed. Using D. melanogaster as a model organism, the knowledge gained may be implemented to design new means of controlling insects as well as in analyzing current batches of insect and pest repellents. In this review, the complete mechanisms of olfactory and gustatory perception, along with their implementation in controlling the global threat of disease-transmitting insect vectors and crop-damaging pests, are explained in fruit flies.
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Prisco L, Deimel SH, Yeliseyeva H, Fiala A, Tavosanis G. The anterior paired lateral neuron normalizes odour-evoked activity in the Drosophila mushroom body calyx. eLife 2021; 10:e74172. [PMID: 34964714 PMCID: PMC8741211 DOI: 10.7554/elife.74172] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/23/2021] [Accepted: 12/28/2021] [Indexed: 11/25/2022] Open
Abstract
To identify and memorize discrete but similar environmental inputs, the brain needs to distinguish between subtle differences of activity patterns in defined neuronal populations. The Kenyon cells (KCs) of the Drosophila adult mushroom body (MB) respond sparsely to complex olfactory input, a property that is thought to support stimuli discrimination in the MB. To understand how this property emerges, we investigated the role of the inhibitory anterior paired lateral (APL) neuron in the input circuit of the MB, the calyx. Within the calyx, presynaptic boutons of projection neurons (PNs) form large synaptic microglomeruli (MGs) with dendrites of postsynaptic KCs. Combining electron microscopy (EM) data analysis and in vivo calcium imaging, we show that APL, via inhibitory and reciprocal synapses targeting both PN boutons and KC dendrites, normalizes odour-evoked representations in MGs of the calyx. APL response scales with the PN input strength and is regionalized around PN input distribution. Our data indicate that the formation of a sparse code by the KCs requires APL-driven normalization of their MG postsynaptic responses. This work provides experimental insights on how inhibition shapes sensory information representation in a higher brain centre, thereby supporting stimuli discrimination and allowing for efficient associative memory formation.
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Affiliation(s)
- Luigi Prisco
- Dynamics of neuronal circuits, German Center for Neurodegenerative Diseases (DZNE)BonnGermany
| | | | - Hanna Yeliseyeva
- Dynamics of neuronal circuits, German Center for Neurodegenerative Diseases (DZNE)BonnGermany
| | - André Fiala
- Department of Molecular Neurobiology of Behavior, University of GöttingenGöttingenGermany
| | - Gaia Tavosanis
- Dynamics of neuronal circuits, German Center for Neurodegenerative Diseases (DZNE)BonnGermany
- LIMES, Rheinische Friedrich Wilhelms Universität BonnBonnGermany
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32
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Antennal lobe organisation in ant, Oecophylla smaragdina: A Golgi study. J Biosci 2021. [DOI: 10.1007/s12038-021-00233-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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How JJ, Navlakha S, Chalasani SH. Neural network features distinguish chemosensory stimuli in Caenorhabditis elegans. PLoS Comput Biol 2021; 17:e1009591. [PMID: 34752447 PMCID: PMC8604368 DOI: 10.1371/journal.pcbi.1009591] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/03/2020] [Revised: 11/19/2021] [Accepted: 10/26/2021] [Indexed: 11/19/2022] Open
Abstract
Nervous systems extract and process information from the environment to alter animal behavior and physiology. Despite progress in understanding how different stimuli are represented by changes in neuronal activity, less is known about how they affect broader neural network properties. We developed a framework for using graph-theoretic features of neural network activity to predict ecologically relevant stimulus properties, in particular stimulus identity. We used the transparent nematode, Caenorhabditis elegans, with its small nervous system to define neural network features associated with various chemosensory stimuli. We first immobilized animals using a microfluidic device and exposed their noses to chemical stimuli while monitoring changes in neural activity of more than 50 neurons in the head region. We found that graph-theoretic features, which capture patterns of interactions between neurons, are modulated by stimulus identity. Further, we show that a simple machine learning classifier trained using graph-theoretic features alone, or in combination with neural activity features, can accurately predict salt stimulus. Moreover, by focusing on putative causal interactions between neurons, the graph-theoretic features were almost twice as predictive as the neural activity features. These results reveal that stimulus identity modulates the broad, network-level organization of the nervous system, and that graph theory can be used to characterize these changes. Animals use their nervous systems to detect and respond to changes in their external environment. A central challenge in computational neuroscience is to determine how specific properties of these stimuli affect interactions between neurons. While most studies have focused on the neurons in the sensory periphery, recent advances allow us to probe how the rest of the nervous system responds to sensory stimulation. We recorded activity of neurons within the C. elegans head region while the animal was exposed to various chemosensory stimuli. We then used computational methods to identify various stimuli by analyzing neural activity. Specifically, we used a combination of population-level activity statistics (e.g., average, standard deviation, frequency-based measures) and graph-theoretic features of functional network structure (e.g., transitivity, which is the existence of strongly connected triplets of neurons) to accurately predict salt stimulus. Our method is general and can be used across species, particularly in instances where the identities of individual neurons are unknown. These results also suggest that neural activity downstream of the sensory periphery contains a signature of changes in the environment.
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Affiliation(s)
- Javier J. How
- Neurosciences Graduate Program, University of California, San Diego, La Jolla, California, United States of America
| | - Saket Navlakha
- Neurosciences Graduate Program, University of California, San Diego, La Jolla, California, United States of America
- Simons Center for Quantitative Biology, Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, United States of America
- * E-mail: (SN); (SHC)
| | - Sreekanth H. Chalasani
- Neurosciences Graduate Program, University of California, San Diego, La Jolla, California, United States of America
- Molecular Neurobiology Laboratory, The Salk Institute for Biological Studies, San Diego, La Jolla, California, United States of America
- * E-mail: (SN); (SHC)
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Mika K, Benton R. Olfactory Receptor Gene Regulation in Insects: Multiple Mechanisms for Singular Expression. Front Neurosci 2021; 15:738088. [PMID: 34602974 PMCID: PMC8481607 DOI: 10.3389/fnins.2021.738088] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/08/2021] [Accepted: 08/24/2021] [Indexed: 12/25/2022] Open
Abstract
The singular expression of insect olfactory receptors in specific populations of olfactory sensory neurons is fundamental to the encoding of odors in patterns of neuronal activity in the brain. How a receptor gene is selected, from among a large repertoire in the genome, to be expressed in a particular neuron is an outstanding question. Focusing on Drosophila melanogaster, where most investigations have been performed, but incorporating recent insights from other insect species, we review the multilevel regulatory mechanisms of olfactory receptor expression. We discuss how cis-regulatory elements, trans-acting factors, chromatin modifications, and feedback pathways collaborate to activate and maintain expression of the chosen receptor (and to suppress others), highlighting similarities and differences with the mechanisms underlying singular receptor expression in mammals. We also consider the plasticity of receptor regulation in response to environmental cues and internal state during the lifetime of an individual, as well as the evolution of novel expression patterns over longer timescales. Finally, we describe the mechanisms and potential significance of examples of receptor co-expression.
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Affiliation(s)
| | - Richard Benton
- Center for Integrative Genomics, Faculty of Biology and Medicine, University of Lausanne, Lausanne, Switzerland
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35
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Del Mármol J, Yedlin MA, Ruta V. The structural basis of odorant recognition in insect olfactory receptors. Nature 2021; 597:126-131. [PMID: 34349260 PMCID: PMC8410599 DOI: 10.1038/s41586-021-03794-8] [Citation(s) in RCA: 118] [Impact Index Per Article: 39.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/28/2021] [Accepted: 07/01/2021] [Indexed: 02/06/2023]
Abstract
Olfactory systems must detect and discriminate amongst an enormous variety of odorants1. To contend with this challenge, diverse species have converged on a common strategy in which odorant identity is encoded through the combinatorial activation of large families of olfactory receptors1-3, thus allowing a finite number of receptors to detect a vast chemical world. Here we offer structural and mechanistic insight into how an individual olfactory receptor can flexibly recognize diverse odorants. We show that the olfactory receptor MhOR5 from the jumping bristletail4 Machilis hrabei assembles as a homotetrameric odorant-gated ion channel with broad chemical tuning. Using cryo-electron microscopy, we elucidated the structure of MhOR5 in multiple gating states, alone and in complex with two of its agonists-the odorant eugenol and the insect repellent DEET. Both ligands are recognized through distributed hydrophobic interactions within the same geometrically simple binding pocket located in the transmembrane region of each subunit, suggesting a structural logic for the promiscuous chemical sensitivity of this receptor. Mutation of individual residues lining the binding pocket predictably altered the sensitivity of MhOR5 to eugenol and DEET and broadly reconfigured the receptor's tuning. Together, our data support a model in which diverse odorants share the same structural determinants for binding, shedding light on the molecular recognition mechanisms that ultimately endow the olfactory system with its immense discriminatory capacity.
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Affiliation(s)
- Josefina Del Mármol
- Laboratory of Neurophysiology and Behavior, The Rockefeller University, New York, NY, USA
| | - Mackenzie A Yedlin
- Laboratory of Neurophysiology and Behavior, The Rockefeller University, New York, NY, USA
| | - Vanessa Ruta
- Laboratory of Neurophysiology and Behavior, The Rockefeller University, New York, NY, USA.
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36
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Nava Gonzales C, McKaughan Q, Bushong EA, Cauwenberghs K, Ng R, Madany M, Ellisman MH, Su CY. Systematic morphological and morphometric analysis of identified olfactory receptor neurons in Drosophila melanogaster. eLife 2021; 10:69896. [PMID: 34423777 PMCID: PMC8410077 DOI: 10.7554/elife.69896] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/29/2021] [Accepted: 08/20/2021] [Indexed: 12/03/2022] Open
Abstract
The biophysical properties of sensory neurons are influenced by their morphometric and morphological features, whose precise measurements require high-quality volume electron microscopy (EM). However, systematic surveys of nanoscale characteristics for identified neurons are scarce. Here, we characterize the morphology of Drosophila olfactory receptor neurons (ORNs) across the majority of genetically identified sensory hairs. By analyzing serial block-face electron microscopy images of cryofixed antennal tissues, we compile an extensive morphometric data set based on 122 reconstructed 3D models for 33 of the 40 identified antennal ORN types. Additionally, we observe multiple novel features—including extracellular vacuoles within sensillum lumen, intricate dendritic branching, mitochondria enrichment in select ORNs, novel sensillum types, and empty sensilla containing no neurons—which raise new questions pertinent to cell biology and sensory neurobiology. Our systematic survey is critical for future investigations into how the size and shape of sensory neurons influence their responses, sensitivity, and circuit function.
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Affiliation(s)
- Cesar Nava Gonzales
- Neurobiology Section, Division of Biological Sciences, University of California, San Diego, San Diego, United States
| | - Quintyn McKaughan
- Neurobiology Section, Division of Biological Sciences, University of California, San Diego, San Diego, United States
| | - Eric A Bushong
- National Center for Microscopy and Imaging Research, Center for Research in Biological Systems, University of California, San Diego, San Diego, United States
| | - Kalyani Cauwenberghs
- Neurobiology Section, Division of Biological Sciences, University of California, San Diego, San Diego, United States
| | - Renny Ng
- Neurobiology Section, Division of Biological Sciences, University of California, San Diego, San Diego, United States
| | - Matthew Madany
- National Center for Microscopy and Imaging Research, Center for Research in Biological Systems, University of California, San Diego, San Diego, United States
| | - Mark H Ellisman
- National Center for Microscopy and Imaging Research, Center for Research in Biological Systems, University of California, San Diego, San Diego, United States
| | - Chih-Ying Su
- Neurobiology Section, Division of Biological Sciences, University of California, San Diego, San Diego, United States
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37
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Vulpe A, Kim HS, Ballou S, Wu ST, Grabe V, Nava Gonzales C, Liang T, Sachse S, Jeanne JM, Su CY, Menuz K. An ammonium transporter is a non-canonical olfactory receptor for ammonia. Curr Biol 2021; 31:3382-3390.e7. [PMID: 34111404 PMCID: PMC8355169 DOI: 10.1016/j.cub.2021.05.025] [Citation(s) in RCA: 23] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/28/2021] [Revised: 04/18/2021] [Accepted: 05/13/2021] [Indexed: 10/21/2022]
Abstract
Numerous hematophagous insects are attracted to ammonia, a volatile released in human sweat and breath.1-3 Low levels of ammonia also attract non-biting insects such as the genetic model organism Drosophila melanogaster and several species of agricultural pests.4,5 Two families of ligand-gated ion channels function as olfactory receptors in insects,6-10 and studies have linked ammonia sensitivity to a particular olfactory receptor in Drosophila.5,11,12 Given the widespread importance of ammonia to insect behavior, it is surprising that the genomes of most insects lack an ortholog of this gene.6 Here, we show that canonical olfactory receptors are not necessary for responses to ammonia in Drosophila. Instead, we demonstrate that a member of the ancient electrogenic ammonium transporter family, Amt, is likely a new type of olfactory receptor. We report two hitherto unidentified olfactory neuron populations that mediate neuronal and behavioral responses to ammonia in Drosophila. Their endogenous ammonia responses are lost in Amt mutant flies, and ectopic expression of either Drosophila or Anopheles Amt confers ammonia sensitivity. These results suggest that Amt is the first transporter known to function as an olfactory receptor in animals and that its function may be conserved across insect species.
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Affiliation(s)
- Alina Vulpe
- Department of Physiology and Neurobiology, University of Connecticut, Storrs, CT 06269, USA
| | - Hyong S Kim
- Department of Neuroscience, Yale University, New Haven, CT 06510, USA
| | - Sydney Ballou
- Department of Physiology and Neurobiology, University of Connecticut, Storrs, CT 06269, USA
| | - Shiuan-Tze Wu
- Neurobiology Section, Division of Biological Sciences, University of California, San Diego, La Jolla, CA 92093, USA
| | - Veit Grabe
- Department of Evolutionary Neuroethology, Max Planck Institute for Chemical Ecology, Jena 07745, Germany
| | - Cesar Nava Gonzales
- Neurobiology Section, Division of Biological Sciences, University of California, San Diego, La Jolla, CA 92093, USA
| | - Tiffany Liang
- Department of Physiology and Neurobiology, University of Connecticut, Storrs, CT 06269, USA
| | - Silke Sachse
- Department of Evolutionary Neuroethology, Max Planck Institute for Chemical Ecology, Jena 07745, Germany
| | - James M Jeanne
- Department of Neuroscience, Yale University, New Haven, CT 06510, USA
| | - Chih-Ying Su
- Neurobiology Section, Division of Biological Sciences, University of California, San Diego, La Jolla, CA 92093, USA
| | - Karen Menuz
- Department of Physiology and Neurobiology, University of Connecticut, Storrs, CT 06269, USA; Connecticut Institute for Brain and Cognitive Sciences, University of Connecticut, Storrs, CT 06269, USA.
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Olfactory coding in the antennal lobe of the bumble bee Bombus terrestris. Sci Rep 2021; 11:10947. [PMID: 34040068 PMCID: PMC8154950 DOI: 10.1038/s41598-021-90400-6] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2020] [Accepted: 05/10/2021] [Indexed: 02/04/2023] Open
Abstract
Sociality is classified as one of the major transitions in evolution, with the largest number of eusocial species found in the insect order Hymenoptera, including the Apini (honey bees) and the Bombini (bumble bees). Bumble bees and honey bees not only differ in their social organization and foraging strategies, but comparative analyses of their genomes demonstrated that bumble bees have a slightly less diverse family of olfactory receptors than honey bees, suggesting that their olfactory abilities have adapted to different social and/or ecological conditions. However, unfortunately, no precise comparison of olfactory coding has been performed so far between honey bees and bumble bees, and little is known about the rules underlying olfactory coding in the bumble bee brain. In this study, we used in vivo calcium imaging to study olfactory coding of a panel of floral odorants in the antennal lobe of the bumble bee Bombus terrestris. Our results show that odorants induce reproducible neuronal activity in the bumble bee antennal lobe. Each odorant evokes a different glomerular activity pattern revealing this molecule's chemical structure, i.e. its carbon chain length and functional group. In addition, pairwise similarity among odor representations are conserved in bumble bees and honey bees. This study thus suggests that bumble bees, like honey bees, are equipped to respond to odorants according to their chemical features.
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Schlegel P, Bates AS, Stürner T, Jagannathan SR, Drummond N, Hsu J, Serratosa Capdevila L, Javier A, Marin EC, Barth-Maron A, Tamimi IFM, Li F, Rubin GM, Plaza SM, Costa M, Jefferis GSXE. Information flow, cell types and stereotypy in a full olfactory connectome. eLife 2021; 10:e66018. [PMID: 34032214 PMCID: PMC8298098 DOI: 10.7554/elife.66018] [Citation(s) in RCA: 60] [Impact Index Per Article: 20.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2020] [Accepted: 05/24/2021] [Indexed: 12/19/2022] Open
Abstract
The hemibrain connectome provides large-scale connectivity and morphology information for the majority of the central brain of Drosophila melanogaster. Using this data set, we provide a complete description of the Drosophila olfactory system, covering all first, second and lateral horn-associated third-order neurons. We develop a generally applicable strategy to extract information flow and layered organisation from connectome graphs, mapping olfactory input to descending interneurons. This identifies a range of motifs including highly lateralised circuits in the antennal lobe and patterns of convergence downstream of the mushroom body and lateral horn. Leveraging a second data set we provide a first quantitative assessment of inter- versus intra-individual stereotypy. Comparing neurons across two brains (three hemispheres) reveals striking similarity in neuronal morphology across brains. Connectivity correlates with morphology and neurons of the same morphological type show similar connection variability within the same brain as across two brains.
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Affiliation(s)
- Philipp Schlegel
- Neurobiology Division, MRC Laboratory of Molecular BiologyCambridgeUnited Kingdom
- Department of Zoology, University of CambridgeCambridgeUnited Kingdom
| | | | - Tomke Stürner
- Department of Zoology, University of CambridgeCambridgeUnited Kingdom
| | | | - Nikolas Drummond
- Department of Zoology, University of CambridgeCambridgeUnited Kingdom
| | - Joseph Hsu
- Department of Zoology, University of CambridgeCambridgeUnited Kingdom
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | | | - Alexandre Javier
- Department of Zoology, University of CambridgeCambridgeUnited Kingdom
| | - Elizabeth C Marin
- Department of Zoology, University of CambridgeCambridgeUnited Kingdom
| | - Asa Barth-Maron
- Department of Neurobiology, Harvard Medical SchoolBostonUnited States
| | - Imaan FM Tamimi
- Department of Zoology, University of CambridgeCambridgeUnited Kingdom
| | - Feng Li
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Gerald M Rubin
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Stephen M Plaza
- Janelia Research Campus, Howard Hughes Medical InstituteAshburnUnited States
| | - Marta Costa
- Department of Zoology, University of CambridgeCambridgeUnited Kingdom
| | - Gregory S X E Jefferis
- Neurobiology Division, MRC Laboratory of Molecular BiologyCambridgeUnited Kingdom
- Department of Zoology, University of CambridgeCambridgeUnited Kingdom
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Task D, Potter CJ. Rapid degeneration of Drosophila olfactory neurons in Orco mutant maxillary palps. MICROPUBLICATION BIOLOGY 2021; 2021:10.17912/micropub.biology.000398. [PMID: 34007957 PMCID: PMC8122221 DOI: 10.17912/micropub.biology.000398] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Abstract
Drosophila melanogaster vinegar flies have two olfactory organs: the antenna and maxillary palp. Olfactory neurons in these tissues respond to odorants via odorant receptors. Insect odorant receptors are heterotetramers of two proteins: an odorant binding OrX subunit and an Odorant Receptor Co-Receptor (Orco). Mutation of Orco disrupts odorant receptor formation, and abolishes olfactory responses. Some antennal olfactory neurons in Orco mutants have been previously shown to degenerate. Here, we examine if maxillary palp olfactory neurons also degenerate in Orco mutants. We find degeneration occurs both more broadly and more rapidly in Orco mutant maxillary palp olfactory neurons than reported for antennae, with ~60% of all mutant olfactory neurons absent in maxillary palps by 7 days post eclosion. Interestingly, the subset of Orco mutant olfactory neurons that express the Or42a receptor appear resistant to degeneration. These results suggest the maxillary palp might be a suitable model for examining the molecular mechanisms underlying neurodegeneration in sensory neurons.
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Affiliation(s)
- Darya Task
- The Solomon H. Snyder Department of Neuroscience, Johns Hopkins University School of Medicine
| | - Christopher J Potter
- The Solomon H. Snyder Department of Neuroscience, Johns Hopkins University School of Medicine,
Correspondence to: Christopher J Potter ()
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41
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Campetella F, Ignell R, Beutel R, Hansson BS, Sachse S. Comparative dissection of the peripheral olfactory system of the Chagas disease vectors Rhodnius prolixus and Rhodnius brethesi. PLoS Negl Trop Dis 2021; 15:e0009098. [PMID: 33857145 PMCID: PMC8078792 DOI: 10.1371/journal.pntd.0009098] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2020] [Revised: 04/27/2021] [Accepted: 03/24/2021] [Indexed: 11/19/2022] Open
Abstract
American trypanosomiasis, or Chagas disease, is transmitted by both domestic and sylvatic species of Triatominae which use sensory cues to locate their vertebrate hosts. Among them, odorants have been shown to play a key role. Previous work revealed morphological differences in the sensory apparatus of different species of Triatomines, but to date a comparative functional study of the olfactory system is lacking. After examining the antennal sensilla with scanning electronic microscopy (SEM), we compared olfactory responses of Rhodnius prolixus and the sylvatic Rhodnius brethesi using an electrophysiological approach. In electroantennogram (EAG) recordings, we first showed that the antenna of R. prolixus is highly responsive to carboxylic acids, compounds found in their habitat and the headspace of their vertebrate hosts. We then compared responses from olfactory sensory neurons (OSNs) housed in the grooved peg sensilla of both species, as these are tuned to these compounds using single-sensillum recordings (SSRs). In R. prolixus, the SSR responses revealed a narrower tuning breath than its sylvatic sibling, with the latter showing responses to a broader range of chemical classes. Additionally, we observed significant differences between these two species in their response to particular volatiles, such as amyl acetate and butyryl chloride. In summary, the closely related, but ecologically differentiated R. prolixus and R. brethesi display distinct differences in their olfactory functions. Considering the ongoing rapid destruction of the natural habitat of sylvatic species and the likely shift towards environments shaped by humans, we expect that our results will contribute to the design of efficient vector control strategies in the future.
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Affiliation(s)
- Florencia Campetella
- Department of Evolutionary Neuroethology, Max Planck Institute for Chemical Ecology, Jena, Germany
| | - Rickard Ignell
- Unit of Chemical Ecology, Department of Plant Protection Biology, Swedish University of Agricultural Sciences, Alnarp, Sweden
| | - Rolf Beutel
- Institute for Zoology and Evolutionary Biology, Friedrich Schiller University, Jena, Germany
| | - Bill S. Hansson
- Department of Evolutionary Neuroethology, Max Planck Institute for Chemical Ecology, Jena, Germany
| | - Silke Sachse
- Department of Evolutionary Neuroethology, Max Planck Institute for Chemical Ecology, Jena, Germany
- * E-mail:
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42
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Arguello JR, Abuin L, Armida J, Mika K, Chai PC, Benton R. Targeted molecular profiling of rare olfactory sensory neurons identifies fate, wiring, and functional determinants. eLife 2021; 10:63036. [PMID: 33666172 PMCID: PMC7993999 DOI: 10.7554/elife.63036] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/11/2020] [Accepted: 03/04/2021] [Indexed: 02/06/2023] Open
Abstract
Determining the molecular properties of neurons is essential to understand their development, function and evolution. Using Targeted DamID (TaDa), we characterize RNA polymerase II occupancy and chromatin accessibility in selected Ionotropic receptor (Ir)-expressing olfactory sensory neurons in Drosophila. Although individual populations represent a minute fraction of cells, TaDa is sufficiently sensitive and specific to identify the expected receptor genes. Unique Ir expression is not consistently associated with differences in chromatin accessibility, but rather to distinct transcription factor profiles. Genes that are heterogeneously expressed across populations are enriched for neurodevelopmental factors, and we identify functions for the POU-domain protein Pdm3 as a genetic switch of Ir neuron fate, and the atypical cadherin Flamingo in segregation of neurons into discrete glomeruli. Together this study reveals the effectiveness of TaDa in profiling rare neural populations, identifies new roles for a transcription factor and a neuronal guidance molecule, and provides valuable datasets for future exploration.
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Affiliation(s)
- J Roman Arguello
- Center for Integrative Genomics Faculty of Biology and Medicine University of Lausanne, Lausanne, Switzerland.,Department of Ecology and Evolution Faculty of Biology and Medicine University of Lausanne, Lausanne, Switzerland.,Swiss Institute of Bioinformatics, Lausanne, Switzerland
| | - Liliane Abuin
- Center for Integrative Genomics Faculty of Biology and Medicine University of Lausanne, Lausanne, Switzerland
| | - Jan Armida
- Center for Integrative Genomics Faculty of Biology and Medicine University of Lausanne, Lausanne, Switzerland
| | - Kaan Mika
- Center for Integrative Genomics Faculty of Biology and Medicine University of Lausanne, Lausanne, Switzerland
| | - Phing Chian Chai
- Center for Integrative Genomics Faculty of Biology and Medicine University of Lausanne, Lausanne, Switzerland
| | - Richard Benton
- Center for Integrative Genomics Faculty of Biology and Medicine University of Lausanne, Lausanne, Switzerland
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43
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McLaughlin CN, Brbić M, Xie Q, Li T, Horns F, Kolluru SS, Kebschull JM, Vacek D, Xie A, Li J, Jones RC, Leskovec J, Quake SR, Luo L, Li H. Single-cell transcriptomes of developing and adult olfactory receptor neurons in Drosophila. eLife 2021; 10:e63856. [PMID: 33555999 PMCID: PMC7870146 DOI: 10.7554/elife.63856] [Citation(s) in RCA: 48] [Impact Index Per Article: 16.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2020] [Accepted: 01/26/2021] [Indexed: 12/11/2022] Open
Abstract
Recognition of environmental cues is essential for the survival of all organisms. Transcriptional changes occur to enable the generation and function of the neural circuits underlying sensory perception. To gain insight into these changes, we generated single-cell transcriptomes of Drosophila olfactory- (ORNs), thermo-, and hygro-sensory neurons at an early developmental and adult stage using single-cell and single-nucleus RNA sequencing. We discovered that ORNs maintain expression of the same olfactory receptors across development. Using receptor expression and computational approaches, we matched transcriptomic clusters corresponding to anatomically and physiologically defined neuron types across multiple developmental stages. We found that cell-type-specific transcriptomes partly reflected axon trajectory choices in development and sensory modality in adults. We uncovered stage-specific genes that could regulate the wiring and sensory responses of distinct ORN types. Collectively, our data reveal transcriptomic features of sensory neuron biology and provide a resource for future studies of their development and physiology.
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Affiliation(s)
- Colleen N McLaughlin
- Department of Biology, Howard Hughes Medical Institute, Stanford UniversityStanfordUnited States
| | - Maria Brbić
- Department of Computer Science, Stanford UniversityStanfordUnited States
| | - Qijing Xie
- Department of Biology, Howard Hughes Medical Institute, Stanford UniversityStanfordUnited States
- Neurosciences Graduate Program, Stanford UniversityStanfordUnited States
| | - Tongchao Li
- Department of Biology, Howard Hughes Medical Institute, Stanford UniversityStanfordUnited States
| | - Felix Horns
- Department of Bioengineering, Stanford UniversityStanfordUnited States
- Biophysics Graduate Program, Stanford UniversityStanfordUnited States
| | - Sai Saroja Kolluru
- Department of Bioengineering, Stanford UniversityStanfordUnited States
- Chan Zuckerberg BiohubStanfordUnited States
| | - Justus M Kebschull
- Department of Biology, Howard Hughes Medical Institute, Stanford UniversityStanfordUnited States
| | - David Vacek
- Department of Biology, Howard Hughes Medical Institute, Stanford UniversityStanfordUnited States
| | - Anthony Xie
- Department of Biology, Howard Hughes Medical Institute, Stanford UniversityStanfordUnited States
| | - Jiefu Li
- Department of Biology, Howard Hughes Medical Institute, Stanford UniversityStanfordUnited States
- Biology Graduate Program, Stanford UniversityStanfordUnited States
| | - Robert C Jones
- Department of Bioengineering, Stanford UniversityStanfordUnited States
| | - Jure Leskovec
- Department of Computer Science, Stanford UniversityStanfordUnited States
| | - Stephen R Quake
- Department of Bioengineering, Stanford UniversityStanfordUnited States
- Chan Zuckerberg BiohubStanfordUnited States
- Department of Applied Physics, Stanford UniversityStanfordUnited States
| | - Liqun Luo
- Department of Biology, Howard Hughes Medical Institute, Stanford UniversityStanfordUnited States
| | - Hongjie Li
- Department of Biology, Howard Hughes Medical Institute, Stanford UniversityStanfordUnited States
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44
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Ye Z, Liu F, Liu N. Three-dimensional structure of the antennal lobe in the Southern house mosquito Culex quinquefasciatus. INSECT SCIENCE 2021; 28:93-102. [PMID: 32091165 DOI: 10.1111/1744-7917.12767] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/06/2019] [Revised: 02/03/2020] [Accepted: 02/10/2020] [Indexed: 06/10/2023]
Abstract
The Southern house mosquito Culex quinquefasciatus relies on its olfactory system to locate the human hosts for blood meals, by which several deadly diseases are transmitted. Olfactory sensory neurons (OSNs) housed in the sensilla on the olfactory appendages send their axons into the antennal lobes (ALs), the primary olfactory center in the brain, where the OSNs expressing the same olfactory receptors converge upon the same spherical structures known as glomeruli in the AL. The structure of the antennal lobe, that is, the spatial organization of the glomeruli, governs the insect's odor identification and discrimination. Drosophila studies have demonstrated the specific connections between receptors and glomeruli based on the 3D structure of the antennal lobe, deepening our understanding of the relationships between glomerular activities and behaviors, but as yet the structure of the Cx. quinquefasciatus antennal lobe remains unknown. We therefore constructed a 3D model of the Cx. quinquefasciatus antennal lobe using nc82 antibody staining, identifying 62 and 44 glomeruli in the female and male mosquito antennal lobe, respectively, with a significant sexual dimorphism in terms of the antennal lobe volume and glomerulus number. These results demonstrate the structural basis of mosquito odor coding and provide a platform for future studies of the mosquito olfactory signal processing mechanism.
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Affiliation(s)
- Zi Ye
- Department of Biological Sciences, Vanderbilt University, Nashville, Tennessee, USA
| | - Feng Liu
- Department of Biological Sciences, Vanderbilt University, Nashville, Tennessee, USA
| | - Nannan Liu
- Department of Entomology and Plant Pathology, Auburn University, Auburn, Alabama, USA
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45
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Puñal VM, Ahmed M, Thornton-Kolbe EM, Clowney EJ. Untangling the wires: development of sparse, distributed connectivity in the mushroom body calyx. Cell Tissue Res 2021; 383:91-112. [PMID: 33404837 PMCID: PMC9835099 DOI: 10.1007/s00441-020-03386-4] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/31/2020] [Accepted: 12/07/2020] [Indexed: 01/16/2023]
Abstract
Appropriate perception and representation of sensory stimuli pose an everyday challenge to the brain. In order to represent the wide and unpredictable array of environmental stimuli, principle neurons of associative learning regions receive sparse, combinatorial sensory inputs. Despite the broad role of such networks in sensory neural circuits, the developmental mechanisms underlying their emergence are not well understood. As mammalian sensory coding regions are numerically complex and lack the accessibility of simpler invertebrate systems, we chose to focus this review on the numerically simpler, yet functionally similar, Drosophila mushroom body calyx. We bring together current knowledge about the cellular and molecular mechanisms orchestrating calyx development, in addition to drawing insights from literature regarding construction of sparse wiring in the mammalian cerebellum. From this, we formulate hypotheses to guide our future understanding of the development of this critical perceptual center.
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Affiliation(s)
- Vanessa M. Puñal
- Department of Molecular, Cellular & Developmental Biology, The University of Michigan, Ann Arbor, MI 48109, USA,Department of Molecular & Integrative Physiology, The University of Michigan, Ann Arbor, MI 48109, USA
| | - Maria Ahmed
- Department of Molecular, Cellular & Developmental Biology, The University of Michigan, Ann Arbor, MI 48109, USA
| | - Emma M. Thornton-Kolbe
- Department of Molecular, Cellular & Developmental Biology, The University of Michigan, Ann Arbor, MI 48109, USA,Neuroscience Graduate Program, The University of Michigan, Ann Arbor, MI 48109, USA
| | - E. Josephine Clowney
- Department of Molecular, Cellular & Developmental Biology, The University of Michigan, Ann Arbor, MI 48109, USA
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46
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Dombrovski M, Condron B. Critical periods shaping the social brain: A perspective from Drosophila. Bioessays 2020; 43:e2000246. [PMID: 33215730 DOI: 10.1002/bies.202000246] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/11/2020] [Revised: 09/28/2020] [Accepted: 09/29/2020] [Indexed: 11/08/2022]
Abstract
Many sensory processing regions of the central brain undergo critical periods of experience-dependent plasticity. During this time ethologically relevant information shapes circuit structure and function. The mechanisms that control critical period timing and duration are poorly understood, and this is of special importance for those later periods of development, which often give rise to complex cognitive functions such as social behavior. Here, we review recent findings in Drosophila, an organism that has some unique experimental advantages, and introduce novel views for manipulating plasticity in the post-embryonic brain. Critical periods in larval and young adult flies resemble classic vertebrate models with distinct onset and termination, display clear connections with complex behaviors, and provide opportunities to control the time course of plasticity. These findings may extend our knowledge about mechanisms underlying extension and reopening of critical periods, a concept that has great relevance to many human neurodevelopmental disorders.
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Affiliation(s)
- Mark Dombrovski
- Department of Biology, University of Virginia, Charlottesville, Virginia, USA
| | - Barry Condron
- Department of Biology, University of Virginia, Charlottesville, Virginia, USA
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47
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Abstract
Insects thrive in diverse ecological niches in large part because of their highly sophisticated olfactory systems. Over the last two decades, a major focus in the study of insect olfaction has been on the role of olfactory receptors in mediating neuronal responses to environmental chemicals. In vivo, these receptors operate in specialized structures, called sensilla, which comprise neurons and non-neuronal support cells, extracellular lymph fluid and a precisely shaped cuticle. While sensilla are inherent to odour sensing in insects, we are only just beginning to understand their construction and function. Here, we review recent work that illuminates how odour-evoked neuronal activity is impacted by sensillar morphology, lymph fluid biochemistry, accessory signalling molecules in neurons and the physiological crosstalk between sensillar cells. These advances reveal multi-layered molecular and cellular mechanisms that determine the selectivity, sensitivity and dynamic modulation of odour-evoked responses in insects.
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Affiliation(s)
- Hayden R Schmidt
- Center for Integrative Genomics, Faculty of Biology and Medicine, University of Lausanne, CH-1015, Lausanne, Switzerland
| | - Richard Benton
- Center for Integrative Genomics, Faculty of Biology and Medicine, University of Lausanne, CH-1015, Lausanne, Switzerland
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48
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Bates AS, Schlegel P, Roberts RJV, Drummond N, Tamimi IFM, Turnbull R, Zhao X, Marin EC, Popovici PD, Dhawan S, Jamasb A, Javier A, Serratosa Capdevila L, Li F, Rubin GM, Waddell S, Bock DD, Costa M, Jefferis GSXE. Complete Connectomic Reconstruction of Olfactory Projection Neurons in the Fly Brain. Curr Biol 2020; 30:3183-3199.e6. [PMID: 32619485 PMCID: PMC7443706 DOI: 10.1016/j.cub.2020.06.042] [Citation(s) in RCA: 79] [Impact Index Per Article: 19.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2020] [Revised: 05/07/2020] [Accepted: 06/12/2020] [Indexed: 12/21/2022]
Abstract
Nervous systems contain sensory neurons, local neurons, projection neurons, and motor neurons. To understand how these building blocks form whole circuits, we must distil these broad classes into neuronal cell types and describe their network connectivity. Using an electron micrograph dataset for an entire Drosophila melanogaster brain, we reconstruct the first complete inventory of olfactory projections connecting the antennal lobe, the insect analog of the mammalian olfactory bulb, to higher-order brain regions in an adult animal brain. We then connect this inventory to extant data in the literature, providing synaptic-resolution "holotypes" both for heavily investigated and previously unknown cell types. Projection neurons are approximately twice as numerous as reported by light level studies; cell types are stereotyped, but not identical, in cell and synapse numbers between brain hemispheres. The lateral horn, the insect analog of the mammalian cortical amygdala, is the main target for this olfactory information and has been shown to guide innate behavior. Here, we find new connectivity motifs, including axo-axonic connectivity between projection neurons, feedback, and lateral inhibition of these axons by a large population of neurons, and the convergence of different inputs, including non-olfactory inputs and memory-related feedback onto third-order olfactory neurons. These features are less prominent in the mushroom body calyx, the insect analog of the mammalian piriform cortex and a center for associative memory. Our work provides a complete neuroanatomical platform for future studies of the adult Drosophila olfactory system.
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Affiliation(s)
- Alexander S Bates
- Neurobiology Division, MRC Laboratory of Molecular Biology, Cambridge CB2 0QH, UK
| | - Philipp Schlegel
- Neurobiology Division, MRC Laboratory of Molecular Biology, Cambridge CB2 0QH, UK; Department of Zoology, University of Cambridge, Cambridge CB2 3EJ, UK
| | | | - Nikolas Drummond
- Department of Zoology, University of Cambridge, Cambridge CB2 3EJ, UK
| | - Imaan F M Tamimi
- Department of Zoology, University of Cambridge, Cambridge CB2 3EJ, UK
| | - Robert Turnbull
- Department of Zoology, University of Cambridge, Cambridge CB2 3EJ, UK
| | - Xincheng Zhao
- Department of Zoology, University of Cambridge, Cambridge CB2 3EJ, UK; Department of Entomology, College of Plant Protection, Henan Agricultural University, Zhengzhou 450002, China
| | - Elizabeth C Marin
- Department of Zoology, University of Cambridge, Cambridge CB2 3EJ, UK
| | - Patricia D Popovici
- Neurobiology Division, MRC Laboratory of Molecular Biology, Cambridge CB2 0QH, UK
| | - Serene Dhawan
- Department of Zoology, University of Cambridge, Cambridge CB2 3EJ, UK
| | - Arian Jamasb
- Department of Zoology, University of Cambridge, Cambridge CB2 3EJ, UK
| | - Alexandre Javier
- Department of Zoology, University of Cambridge, Cambridge CB2 3EJ, UK
| | | | - Feng Li
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA
| | - Gerald M Rubin
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA
| | - Scott Waddell
- Centre for Neural Circuits and Behaviour, The University of Oxford, Oxford OX1 3SR, UK
| | - Davi D Bock
- Department of Neurological Sciences, Larner College of Medicine, University of Vermont, VT 05405, USA
| | - Marta Costa
- Department of Zoology, University of Cambridge, Cambridge CB2 3EJ, UK
| | - Gregory S X E Jefferis
- Neurobiology Division, MRC Laboratory of Molecular Biology, Cambridge CB2 0QH, UK; Department of Zoology, University of Cambridge, Cambridge CB2 3EJ, UK.
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49
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Marin EC, Büld L, Theiss M, Sarkissian T, Roberts RJV, Turnbull R, Tamimi IFM, Pleijzier MW, Laursen WJ, Drummond N, Schlegel P, Bates AS, Li F, Landgraf M, Costa M, Bock DD, Garrity PA, Jefferis GSXE. Connectomics Analysis Reveals First-, Second-, and Third-Order Thermosensory and Hygrosensory Neurons in the Adult Drosophila Brain. Curr Biol 2020; 30:3167-3182.e4. [PMID: 32619476 PMCID: PMC7443704 DOI: 10.1016/j.cub.2020.06.028] [Citation(s) in RCA: 51] [Impact Index Per Article: 12.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/21/2020] [Revised: 05/08/2020] [Accepted: 06/08/2020] [Indexed: 01/08/2023]
Abstract
Animals exhibit innate and learned preferences for temperature and humidity-conditions critical for their survival and reproduction. Leveraging a whole-brain electron microscopy volume, we studied the adult Drosophila melanogaster circuitry associated with antennal thermo- and hygrosensory neurons. We have identified two new target glomeruli in the antennal lobe, in addition to the five known ones, and the ventroposterior projection neurons (VP PNs) that relay thermo- and hygrosensory information to higher brain centers, including the mushroom body and lateral horn, seats of learned and innate behavior. We present the first connectome of a thermo- and hygrosensory neuropil, the lateral accessory calyx (lACA), by reconstructing neurons downstream of heating- and cooling-responsive VP PNs. A few mushroom body-intrinsic neurons solely receive thermosensory input from the lACA, while most receive additional olfactory and thermo- and/or hygrosensory PN inputs. Furthermore, several classes of lACA-associated neurons form a local network with outputs to other brain neuropils, suggesting that the lACA serves as a hub for thermo- and hygrosensory circuitry. For example, DN1a neurons link thermosensory PNs in the lACA to the circadian clock via the accessory medulla. Finally, we survey strongly connected downstream partners of VP PNs across the protocerebrum; these include a descending neuron targeted by dry-responsive VP PNs, meaning that just two synapses might separate hygrosensory inputs from motor circuits. These data provide a comprehensive first- and second-order layer analysis of Drosophila thermo- and hygrosensory systems and an initial survey of third-order neurons that could directly modulate behavior.
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Affiliation(s)
- Elizabeth C Marin
- Department of Zoology, University of Cambridge, Cambridge CB2 3EJ, UK
| | - Laurin Büld
- Department of Zoology, University of Cambridge, Cambridge CB2 3EJ, UK
| | - Maria Theiss
- Department of Zoology, University of Cambridge, Cambridge CB2 3EJ, UK
| | | | | | - Robert Turnbull
- Department of Zoology, University of Cambridge, Cambridge CB2 3EJ, UK
| | - Imaan F M Tamimi
- Department of Zoology, University of Cambridge, Cambridge CB2 3EJ, UK
| | - Markus W Pleijzier
- Division of Neurobiology, MRC Laboratory of Molecular Biology, Cambridge, Cambridgeshire CB2 0QH, UK
| | - Willem J Laursen
- Department of Biology, Brandeis University, Waltham, MA 02454, USA
| | - Nik Drummond
- Department of Zoology, University of Cambridge, Cambridge CB2 3EJ, UK
| | - Philipp Schlegel
- Department of Zoology, University of Cambridge, Cambridge CB2 3EJ, UK; Division of Neurobiology, MRC Laboratory of Molecular Biology, Cambridge, Cambridgeshire CB2 0QH, UK
| | - Alexander S Bates
- Division of Neurobiology, MRC Laboratory of Molecular Biology, Cambridge, Cambridgeshire CB2 0QH, UK
| | - Feng Li
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA
| | - Matthias Landgraf
- Department of Zoology, University of Cambridge, Cambridge CB2 3EJ, UK
| | - Marta Costa
- Department of Zoology, University of Cambridge, Cambridge CB2 3EJ, UK
| | - Davi D Bock
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA; Larner College of Medicine, University of Vermont, Burlington, VT 05405, USA
| | - Paul A Garrity
- Department of Biology, Brandeis University, Waltham, MA 02454, USA
| | - Gregory S X E Jefferis
- Department of Zoology, University of Cambridge, Cambridge CB2 3EJ, UK; Division of Neurobiology, MRC Laboratory of Molecular Biology, Cambridge, Cambridgeshire CB2 0QH, UK.
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50
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Coates KE, Calle-Schuler SA, Helmick LM, Knotts VL, Martik BN, Salman F, Warner LT, Valla SV, Bock DD, Dacks AM. The Wiring Logic of an Identified Serotonergic Neuron That Spans Sensory Networks. J Neurosci 2020; 40:6309-6327. [PMID: 32641403 PMCID: PMC7424878 DOI: 10.1523/jneurosci.0552-20.2020] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/13/2020] [Revised: 06/16/2020] [Accepted: 06/25/2020] [Indexed: 12/21/2022] Open
Abstract
Serotonergic neurons project widely throughout the brain to modulate diverse physiological and behavioral processes. However, a single-cell resolution understanding of the connectivity of serotonergic neurons is currently lacking. Using a whole-brain EM dataset of a female Drosophila, we comprehensively determine the wiring logic of a broadly projecting serotonergic neuron (the CSDn) that spans several olfactory regions. Within the antennal lobe, the CSDn differentially innervates each glomerulus, yet surprisingly, this variability reflects a diverse set of presynaptic partners, rather than glomerulus-specific differences in synaptic output, which is predominately to local interneurons. Moreover, the CSDn has distinct connectivity relationships with specific local interneuron subtypes, suggesting that the CSDn influences distinct aspects of local network processing. Across olfactory regions, the CSDn has different patterns of connectivity, even having different connectivity with individual projection neurons that also span these regions. Whereas the CSDn targets inhibitory local neurons in the antennal lobe, the CSDn has more distributed connectivity in the LH, preferentially synapsing with principal neuron types based on transmitter content. Last, we identify individual novel synaptic partners associated with other sensory domains that provide strong, top-down input to the CSDn. Together, our study reveals the complex connectivity of serotonergic neurons, which combine the integration of local and extrinsic synaptic input in a nuanced, region-specific manner.SIGNIFICANCE STATEMENT All sensory systems receive serotonergic modulatory input. However, a comprehensive understanding of the synaptic connectivity of individual serotonergic neurons is lacking. In this study, we use a whole-brain EM microscopy dataset to comprehensively determine the wiring logic of a broadly projecting serotonergic neuron in the olfactory system of Drosophila Collectively, our study demonstrates, at a single-cell level, the complex connectivity of serotonergic neurons within their target networks, identifies specific cell classes heavily targeted for serotonergic modulation in the olfactory system, and reveals novel extrinsic neurons that provide strong input to this serotonergic system outside of the context of olfaction. Elucidating the connectivity logic of individual modulatory neurons provides a ground plan for the seemingly heterogeneous effects of modulatory systems.
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Affiliation(s)
- Kaylynn E Coates
- Department of Biology, West Virginia University, Morgantown, West Virginia 26506
| | | | - Levi M Helmick
- Department of Biology, West Virginia University, Morgantown, West Virginia 26506
| | - Victoria L Knotts
- Department of Biology, West Virginia University, Morgantown, West Virginia 26506
| | - Brennah N Martik
- Department of Biology, West Virginia University, Morgantown, West Virginia 26506
| | - Farzaan Salman
- Department of Biology, West Virginia University, Morgantown, West Virginia 26506
| | - Lauren T Warner
- Department of Biology, West Virginia University, Morgantown, West Virginia 26506
| | - Sophia V Valla
- Department of Biology, West Virginia University, Morgantown, West Virginia 26506
| | - Davi D Bock
- Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, Virginia 20147
- Department of Neurological Sciences, Larner College of Medicine, University of Vermont, Burlington, Vermont 05405
| | - Andrew M Dacks
- Department of Biology, West Virginia University, Morgantown, West Virginia 26506
- Department of Neuroscience, West Virginia University, Morgantown, West Virginia 26506
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