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For: Lisec J, Hoffmann F, Schmitt C, Jaeger C. Extending the Dynamic Range in Metabolomics Experiments by Automatic Correction of Peaks Exceeding the Detection Limit. Anal Chem 2016;88:7487-92. [PMID: 27377477 DOI: 10.1021/acs.analchem.6b02515] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Number Cited by Other Article(s)
1
López-Tubau JM, Laibach N, Burciaga-Monge A, Alseekh S, Deng C, Fernie AR, Altabella T, Ferrer A. Differential impact of impaired steryl ester biosynthesis on the metabolome of tomato fruits and seeds. PHYSIOLOGIA PLANTARUM 2025;177:e70022. [PMID: 39710490 DOI: 10.1111/ppl.70022] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/05/2024] [Revised: 12/03/2024] [Accepted: 12/10/2024] [Indexed: 12/24/2024]
2
Fontanet‐Manzaneque JB, Laibach N, Herrero‐García I, Coleto‐Alcudia V, Blasco‐Escámez D, Zhang C, Orduña L, Alseekh S, Miller S, Bjarnholt N, Fernie AR, Matus JT, Caño‐Delgado AI. Untargeted mutagenesis of brassinosteroid receptor SbBRI1 confers drought tolerance by altering phenylpropanoid metabolism in Sorghum bicolor. PLANT BIOTECHNOLOGY JOURNAL 2024;22:3406-3423. [PMID: 39325724 PMCID: PMC11606431 DOI: 10.1111/pbi.14461] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/29/2024] [Revised: 08/07/2024] [Accepted: 08/22/2024] [Indexed: 09/28/2024]
3
A Flexible Tool to Correct Superimposed Mass Isotopologue Distributions in GC-APCI-MS Flux Experiments. Metabolites 2022;12:metabo12050408. [PMID: 35629912 PMCID: PMC9144802 DOI: 10.3390/metabo12050408] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/29/2022] [Revised: 04/14/2022] [Accepted: 04/28/2022] [Indexed: 02/05/2023]  Open
4
Triangular-wave controlled amplitude-modulated flow analysis for extending dynamic range to saturated signals. ANAL SCI 2022;38:795-802. [PMID: 35298795 DOI: 10.1007/s44211-022-00097-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/10/2021] [Accepted: 02/04/2022] [Indexed: 11/01/2022]
5
Defining Blood Plasma and Serum Metabolome by GC-MS. Metabolites 2021;12:metabo12010015. [PMID: 35050137 PMCID: PMC8779220 DOI: 10.3390/metabo12010015] [Citation(s) in RCA: 18] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/24/2021] [Revised: 12/18/2021] [Accepted: 12/21/2021] [Indexed: 01/04/2023]  Open
6
Xue J, Derks RJ, Webb W, Billings EM, Aisporna A, Giera M, Siuzdak G. Single Quadrupole Multiple Fragment Ion Monitoring Quantitative Mass Spectrometry. Anal Chem 2021;93:10879-10889. [PMID: 34313111 PMCID: PMC8762722 DOI: 10.1021/acs.analchem.1c01246] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
7
Systematic Identification of MACC1-Driven Metabolic Networks in Colorectal Cancer. Cancers (Basel) 2021;13:cancers13050978. [PMID: 33652667 PMCID: PMC7956336 DOI: 10.3390/cancers13050978] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/11/2020] [Revised: 02/16/2021] [Accepted: 02/21/2021] [Indexed: 11/25/2022]  Open
8
Niu Y, Liu J, Yang R, Zhang J, Shao B. Atmospheric pressure chemical ionization source as an advantageous technique for gas chromatography-tandem mass spectrometry. Trends Analyt Chem 2020. [DOI: 10.1016/j.trac.2020.116053] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
9
Kotani A, Hakamata H, Hayashi Y. An automated assessment system of limits of detection and quantitation in gradient high-performance liquid chromatography with ultraviolet detection. J Chromatogr A 2020;1621:461077. [DOI: 10.1016/j.chroma.2020.461077] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/21/2020] [Revised: 03/18/2020] [Accepted: 03/24/2020] [Indexed: 01/16/2023]
10
An automated system for predicting detection limit and precision profile from a chromatogram. J Chromatogr A 2020;1612:460644. [PMID: 31676091 DOI: 10.1016/j.chroma.2019.460644] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/29/2019] [Revised: 10/13/2019] [Accepted: 10/19/2019] [Indexed: 11/22/2022]
11
Stanstrup J, Broeckling CD, Helmus R, Hoffmann N, Mathé E, Naake T, Nicolotti L, Peters K, Rainer J, Salek RM, Schulze T, Schymanski EL, Stravs MA, Thévenot EA, Treutler H, Weber RJM, Willighagen E, Witting M, Neumann S. The metaRbolomics Toolbox in Bioconductor and beyond. Metabolites 2019;9:E200. [PMID: 31548506 PMCID: PMC6835268 DOI: 10.3390/metabo9100200] [Citation(s) in RCA: 51] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/11/2019] [Revised: 09/16/2019] [Accepted: 09/17/2019] [Indexed: 11/17/2022]  Open
12
Beale DJ, Pinu FR, Kouremenos KA, Poojary MM, Narayana VK, Boughton BA, Kanojia K, Dayalan S, Jones OAH, Dias DA. Review of recent developments in GC-MS approaches to metabolomics-based research. Metabolomics 2018;14:152. [PMID: 30830421 DOI: 10.1007/s11306-018-1449-2] [Citation(s) in RCA: 246] [Impact Index Per Article: 35.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 12/21/2017] [Accepted: 11/08/2018] [Indexed: 12/19/2022]
13
Hoffmann F, Jaeger C, Bhattacharya A, Schmitt CA, Lisec J. Nontargeted Identification of Tracer Incorporation in High-Resolution Mass Spectrometry. Anal Chem 2018;90:7253-7260. [PMID: 29799187 DOI: 10.1021/acs.analchem.8b00356] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
14
Kaufmann A, Walker S. Comparison of linear intrascan and interscan dynamic ranges of Orbitrap and ion-mobility time-of-flight mass spectrometers. RAPID COMMUNICATIONS IN MASS SPECTROMETRY : RCM 2017;31:1915-1926. [PMID: 28875592 DOI: 10.1002/rcm.7981] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/01/2017] [Revised: 08/28/2017] [Accepted: 08/31/2017] [Indexed: 06/07/2023]
15
Pinkerton DK, Reaser BC, Berrier KL, Synovec RE. Determining the Probability of Achieving a Successful Quantitative Analysis for Gas Chromatography–Mass Spectrometry. Anal Chem 2017;89:9926-9933. [DOI: 10.1021/acs.analchem.7b02230] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
16
Misra BB, Fahrmann JF, Grapov D. Review of emerging metabolomic tools and resources: 2015-2016. Electrophoresis 2017. [PMID: 28621886 DOI: 10.1002/elps.201700110] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
17
Kadjo AF, Liao H, Dasgupta PK, Kraiczek KG. Width Based Characterization of Chromatographic Peaks: Beyond Height and Area. Anal Chem 2017;89:3893-3900. [DOI: 10.1021/acs.analchem.6b04858] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
18
Jaeger C, Hoffmann F, Schmitt CA, Lisec J. Automated Annotation and Evaluation of In-Source Mass Spectra in GC/Atmospheric Pressure Chemical Ionization-MS-Based Metabolomics. Anal Chem 2016;88:9386-9390. [PMID: 27584561 DOI: 10.1021/acs.analchem.6b02743] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
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