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Cao Z, Kim C, Li Z, Jung J. Comparing environmental fate and ecotoxicity of conventional and biodegradable plastics: A critical review. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 951:175735. [PMID: 39187074 DOI: 10.1016/j.scitotenv.2024.175735] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/01/2024] [Revised: 07/31/2024] [Accepted: 08/21/2024] [Indexed: 08/28/2024]
Abstract
Plastic pollution is a consequential problem worldwide, prompting the widespread use of biodegradable plastics (BPs). However, not all BPs are completely degradable under natural conditions, but instead produce biodegradable microplastics (BMPs), release chemical additives, and absorb micropollutants, thus causing toxicity to living organisms in similar manners to conventional plastics (CPs). The new problems caused by biodegradable plastics cannot be ignored and requires a thorough comparison of the differences between conventional and biodegradable plastics and microplastics. This review comprehensively compares their environmental fates, such as biodegradation and micropollutant sorption, and ecotoxicity in soil and water environments. The results showed that it is difficult to determine the natural conditions required for the complete biodegradation of BPs. Some chemical additives in BPs differ from those in CPs and may pose new threats to ecosystems. Because of functional group differences, most BMPs had higher micropollutant sorption capacities than conventional microplastics (CMPs). The ecotoxicity comparison showed that BMPs had similar or even greater adverse effects than CMPs. This review highlights several knowledge gaps in this new field and suggests directions for future studies.
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Affiliation(s)
- Zhihan Cao
- Division of Environmental Science and Ecological Engineering, Korea University, Seoul 02841, Republic of Korea
| | - Changhae Kim
- Division of Environmental Science and Ecological Engineering, Korea University, Seoul 02841, Republic of Korea
| | - Zhihua Li
- Marine College, Shandong University, Weihai, Shandong 264209, China
| | - Jinho Jung
- Division of Environmental Science and Ecological Engineering, Korea University, Seoul 02841, Republic of Korea.
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2
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Maday SDM, Kingsbury JM, Weaver L, Pantos O, Wallbank JA, Doake F, Masterton H, Hopkins M, Dunlop R, Gaw S, Theobald B, Risani R, Abbel R, Smith D, Handley KM, Lear G. Taxonomic variation, plastic degradation, and antibiotic resistance traits of plastisphere communities in the maturation pond of a wastewater treatment plant. Appl Environ Microbiol 2024:e0071524. [PMID: 39329490 DOI: 10.1128/aem.00715-24] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/15/2024] [Accepted: 09/04/2024] [Indexed: 09/28/2024] Open
Abstract
Wastewater treatment facilities can filter out some plastics before they reach the open environment, yet microplastics often persist throughout these systems. As they age, microplastics in wastewater may both leach and sorb pollutants and fragment to provide an increased surface area for bacterial attachment and conjugation, possibly impacting antimicrobial resistance (AMR) traits. Despite this, little is known about the effects of persistent plastic pollution on microbial functioning. To address this knowledge gap, we deployed five different artificially weathered plastic types and a glass control into the final maturation pond of a municipal wastewater treatment plant in Ōtautahi-Christchurch, Aotearoa/New Zealand. We sampled the plastic-associated biofilms (plastisphere) at 2, 6, 26, and 52 weeks, along with the ambient pond water, at three different depths (20, 40, and 60 cm from the pond water surface). We investigated the changes in plastisphere microbial diversity and functional potential through metagenomic sequencing. Bacterial 16S ribosomal RNA genes composition did not vary among plastic types and glass controls (P = 0.997) but varied among sampling times [permutational multivariate analysis of variance (PERMANOVA), P = 0.001] and depths (PERMANOVA, P = 0.011). Overall, there was no polymer-substrate specificity evident in the total composition of genes (PERMANOVA, P = 0.67), but sampling time (PERMANOVA, P = 0.002) and depth were significant factors (PERMANOVA, P = 0.001). The plastisphere housed diverse AMR gene families, potentially influenced by biofilm-meditated conjugation. The plastisphere also harbored an increased abundance of genes associated with the biodegradation of nylon, or nylon-associated substances, including nylon oligomer-degrading enzymes and hydrolases.IMPORTANCEPlastic pollution is pervasive and ubiquitous. Occurrences of plastics causing entanglement or ingestion, the leaching of toxic additives and persistent organic pollutants from environmental plastics, and their consequences for marine macrofauna are widely reported. However, little is known about the effects of persistent plastic pollution on microbial functioning. Shotgun metagenomics sequencing provides us with the necessary tools to examine broad-scale community functioning to further investigate how plastics influence microbial communities. This study provides insight into the functional consequence of continued exposure to waste plastic by comparing the prokaryotic functional potential of biofilms on five types of plastic [linear low-density polyethylene (LLDPE), nylon-6, polyethylene terephthalate, polylactic acid, and oxygen-degradable LLDPE], glass, and ambient pond water over 12 months and at different depths (20, 40, and 60 cm) within a tertiary maturation pond of a municipal wastewater treatment plant.
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Affiliation(s)
- Stefan D M Maday
- School of Biological Sciences, University of Auckland, Auckland, New Zealand
| | - Joanne M Kingsbury
- Institute of Environmental Science and Research, Christchurch, New Zealand
| | - Louise Weaver
- Institute of Environmental Science and Research, Christchurch, New Zealand
| | - Olga Pantos
- Institute of Environmental Science and Research, Christchurch, New Zealand
| | - Jessica A Wallbank
- School of Biological Sciences, University of Auckland, Auckland, New Zealand
| | - Fraser Doake
- Institute of Environmental Science and Research, Christchurch, New Zealand
| | - Hayden Masterton
- Institute of Environmental Science and Research, Christchurch, New Zealand
| | - Maisie Hopkins
- School of Physical and Chemical Sciences, University of Canterbury, Christchurch, New Zealand
| | - Rosa Dunlop
- School of Physical and Chemical Sciences, University of Canterbury, Christchurch, New Zealand
| | - Sally Gaw
- School of Physical and Chemical Sciences, University of Canterbury, Christchurch, New Zealand
| | | | | | | | | | - Kim M Handley
- School of Biological Sciences, University of Auckland, Auckland, New Zealand
| | - Gavin Lear
- School of Biological Sciences, University of Auckland, Auckland, New Zealand
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Saemi-Komsari M, Esmaeili HR, Keshavarzi B, Busquets R, Abbasi K, Birami FA, Masoumi A. Trophic transfer, bioaccumulation and translocation of microplastics in an international listed wetland on the Montreux record. ENVIRONMENTAL RESEARCH 2024; 257:119172. [PMID: 38768889 DOI: 10.1016/j.envres.2024.119172] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/16/2024] [Revised: 05/02/2024] [Accepted: 05/16/2024] [Indexed: 05/22/2024]
Abstract
Microplastics (MPs) are concerning emerging pollutants. Here, MPs in four edible aquatic species of different trophic levels (between ∼2 and 4), including fish species Esox lucius (Esocidae: Esocinae); Cyprinus carpio (Cyprinidae: Cyprininae); and Luciobarbus caspius (Cyprinidae: Barbinae); and the swan mussel Anodonta cygnea (Unionidae), were assessed in the Anzali freshwater ecosystem. It is a listed wetland in the Montreux record. MPs were extracted from gastrointestinal tracts (GI), gills, muscles, and skin. All the studied fish and mussels (n = 33) had MPs. MP fibres, fragments and sheets were detected in every GI examined, however, fibres were the only type of MPs in skins, muscles and gills and were the most abundant MP. The MPs found in the fish and mussels were mainly made of nylon (35% of the total MPs), polypropylene-low density polyethylene (30%), and polycarbonate (25%). The average numbers of MPs found in every fish specimen, expressed per wet body mass, had a moderate negative correlation with the condition factor (K) (MP/g - K: Pearson correlation r = -0.413, p = 0.049), and there was no significant relation with the growth factor (b) (r = -0.376; p = 0.068). Importantly, Luciobarbus caspius (with trophic level 2.7-2.8) bioaccumulated MPs and presented a strong correlation between their MP contamination and age (r = 0.916 p < 0.05). Greater gill mass (or related factors) played an important role in the accumulation of MPs, and there was a strong correlation between these factors for Esox lucius and Cyprinus carpio (r = 0.876; r = 0.846; p < 0.05 respectively). The highest MP/g gills (1.91 ± 2.65) were in the filter feeder Anodonta cygnea inhabiting the benthic zone. Esox lucius (piscivorous, trophic level 4.1) was the most contaminated species overall (a total of 83 MPs in 8 individuals, with 0.92 MP/g fish), and their gills where MPs mainly accumulated. Cyprinus carpio was the most contaminated specimen (MPs in specimens), while the number of MPs per mass unit increased with the trophic level. Their feeding and ecological behavior in the aquatic habitat affected the level of accumulation. This work includes evidence of translocation of MPs within the aquatic organisms.
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Affiliation(s)
- Maryam Saemi-Komsari
- Ichthyology and Molecular Systematics Laboratory, Zoology Section, Biology Department, School of Science, Shiraz University, Shiraz, Iran
| | - Hamid Reza Esmaeili
- Ichthyology and Molecular Systematics Laboratory, Zoology Section, Biology Department, School of Science, Shiraz University, Shiraz, Iran.
| | - Behnam Keshavarzi
- Department of Earth Sciences, College of Science, Shiraz University, Shiraz, Iran
| | - Rosa Busquets
- Department of Civil, Environmental and Geomatic Engineering, University College London, Gower St, Bloomsbury, London, WC1E 6BT, United Kingdom; Faculty of Health, Science, Social Care and Education, School of Pharmacy and Chemistry, Kingston University, Penrhyn Road, Kingston Upon Thames, KT1 2EE, United Kingdom
| | - Keyvan Abbasi
- Inland Waters Aquaculture Research Center, Iranian Fisheries Sciences Research Institute, Agricultural Research, Education and Extension Organization, Bandar Anzali, Iran
| | - Farideh Amini Birami
- Department of Earth Sciences, College of Science, Shiraz University, Shiraz, Iran
| | - AmirHassan Masoumi
- Ichthyology and Molecular Systematics Laboratory, Zoology Section, Biology Department, School of Science, Shiraz University, Shiraz, Iran
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4
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Basini G, Bertini S, Bussolati S, Zappavigna F, Berni M, Scaltriti E, Ramoni R, Grolli S, Quintavalla F, Grasselli F. The porcine corpus luteum as a model for studying the effects of nanoplastics. ENVIRONMENTAL TOXICOLOGY AND PHARMACOLOGY 2024; 110:104503. [PMID: 39025424 DOI: 10.1016/j.etap.2024.104503] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/31/2024] [Revised: 07/10/2024] [Accepted: 07/14/2024] [Indexed: 07/20/2024]
Abstract
Nanoplastics (NPs) affect fertility. We evaluated the effects of NPs treatment on luteal and endothelial cells. We examined crucial markers of growth and redox status. NPs treatment did not induce changes in ATP levels in luteal cells, while it increased (p< 0.05) their proliferation. In endothelial cells, no change in proliferation was detected, while an increase (p<0.05) in ATP levels was observed. The increase of reactive oxygen species, superoxide anion (p<0.05) and nitric oxide (p<0.001) was detected in both cell types, which also showed changes in superoxide dismutase enzyme activity as well as an increase of non-enzymatic antioxidant power (p<0.05). A decrease (p<0.05) in progesterone production as well as an increase of vascular endothelial growth factor A levels were detected (p<0.05). In addition, a dose-dependent accumulation of NPs in endothelial cells was shown, that likely occurred through adhesion and internalization. Results underline potential risk of NPs for corpus luteum functionality.
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Affiliation(s)
- Giuseppina Basini
- Dipartimento di Scienze Medico-Veterinarie, Università degli Studi di Parma, Via del Taglio 10, Parma 43126, Italy.
| | - Simone Bertini
- Dipartimento di Scienze Medico-Veterinarie, Università degli Studi di Parma, Via del Taglio 10, Parma 43126, Italy
| | - Simona Bussolati
- Dipartimento di Scienze Medico-Veterinarie, Università degli Studi di Parma, Via del Taglio 10, Parma 43126, Italy
| | - Francesca Zappavigna
- Dipartimento di Scienze Medico-Veterinarie, Università degli Studi di Parma, Via del Taglio 10, Parma 43126, Italy
| | - Melissa Berni
- Risk Analysis and Genomic Epidemiology Unit, Istituto Zooprofilattico Sperimentale della Lombardia e dell'Emilia Romagna, Strada dei Mercati 13a, Parma 43126, Italy
| | - Erika Scaltriti
- Risk Analysis and Genomic Epidemiology Unit, Istituto Zooprofilattico Sperimentale della Lombardia e dell'Emilia Romagna, Strada dei Mercati 13a, Parma 43126, Italy
| | - Roberto Ramoni
- Dipartimento di Scienze Medico-Veterinarie, Università degli Studi di Parma, Via del Taglio 10, Parma 43126, Italy
| | - Stefano Grolli
- Dipartimento di Scienze Medico-Veterinarie, Università degli Studi di Parma, Via del Taglio 10, Parma 43126, Italy
| | - Fausto Quintavalla
- Dipartimento di Scienze Medico-Veterinarie, Università degli Studi di Parma, Via del Taglio 10, Parma 43126, Italy
| | - Francesca Grasselli
- Dipartimento di Scienze Medico-Veterinarie, Università degli Studi di Parma, Via del Taglio 10, Parma 43126, Italy
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González-Márquez A, Andrade-Alvarado AD, González-Mota R, Sánchez C. Enhanced degradation of phototreated recycled and unused low-density polyethylene films by Pleurotus ostreatus. World J Microbiol Biotechnol 2024; 40:309. [PMID: 39179751 DOI: 10.1007/s11274-024-04116-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/11/2024] [Accepted: 08/19/2024] [Indexed: 08/26/2024]
Abstract
Polyethylene, one of the most used petroleum-derived polymers, causes serious environmental pollution. The ability of Pleurotus ostreatus to degrade UV-treated and untreated recycled and unused (new) low-density polyethylene (LDPE) films was studied. We determined the fungal biomass production, enzyme production, and enzyme yield. Changes in the chemical structure and surface morphology of the LDPE after fungal growth were analyzed using FTIR spectroscopy and SEM. Functional group indices and contact angles were also evaluated. In general, the highest Lac (6013 U/L), LiP (2432 U/L), MnP (995 U/L) and UP (6671 U/L) activities were observed in irradiated recycled LDPE (IrRPE). The contact angle of all samples was negatively correlated with fermentation time; the smaller the contact angle, the longer the fermentation time, indicating effective biodegradation. The IrRPE samples exhibited the smallest contact angle (49°) at 4 weeks, and the samples were fragmented (into two pieces) at 5 weeks. This fungus could degrade unused (new) LDPE significantly within 6 weeks. The biodegradation of LDPE proceeded faster in recycled than in unused samples, which can be enhanced by exposing LDPE to UV radiation. Enzymatic production during fungal growth suggest that LDPE degradation is initiated by laccase (Lac) followed by lignin peroxidase (LiP), whereas manganese peroxidase (MnP) and unspecific peroxygenase (UP) are involved in the final degradation process. This is the first experimental study on the fungal growth and its main enzymes involved in LDPE biodegradation. This fungus has great promise as a safe, efficient, and environmentally friendly organism capable of degrading LDPE.
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Affiliation(s)
- Angel González-Márquez
- Laboratory of Biotechnology, Research Centre for Biological Sciences, Autonomous University of Tlaxcala, Ixtacuixtla, Tlaxcala, 90120, Mexico
| | | | - Rosario González-Mota
- Laboratory of Optoelectronics, Technological Institute of Aguascalientes, Aguascalientes, 20256, Mexico
| | - Carmen Sánchez
- Laboratory of Biotechnology, Research Centre for Biological Sciences, Autonomous University of Tlaxcala, Ixtacuixtla, Tlaxcala, 90120, Mexico.
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6
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Safdar A, Ismail F, Safdar M, Imran M. Eco-friendly approaches for mitigating plastic pollution: advancements and implications for a greener future. Biodegradation 2024; 35:493-518. [PMID: 38310578 DOI: 10.1007/s10532-023-10062-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/14/2023] [Accepted: 12/13/2023] [Indexed: 02/06/2024]
Abstract
Plastic pollution has become a global problem since the extensive use of plastic in industries such as packaging, electronics, manufacturing and construction, healthcare, transportation, and others. This has resulted in an environmental burden that is continually growing, which has inspired many scientists as well as environmentalists to come up with creative solutions to deal with this problem. Numerous studies have been reviewed to determine practical, affordable, and environmentally friendly solutions to regulate plastic waste by leveraging microbes' innate abilities to naturally decompose polymers. Enzymatic breakdown of plastics has been proposed to serve this goal since the discovery of enzymes from microbial sources that truly interact with plastic in its naturalistic environment and because it is a much faster and more effective method than others. The scope of diverse microbes and associated enzymes in polymer breakdown is highlighted in the current review. The use of co-cultures or microbial consortium-based techniques for the improved breakdown of plastic products and the generation of high-value end products that may be utilized as prototypes of bioenergy sources is highlighted. The review also offers a thorough overview of the developments in the microbiological and enzymatic biological degradation of plastics, as well as several elements that impact this process for the survival of our planet.
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Affiliation(s)
- Ayesha Safdar
- Department of Biochemistry, The Islamia University of Bahawalpur, Bahawalpur, 63100, Punjab, Pakistan
- The Islamia University of Bahawalpur, Bahawalpur, 63100, Punjab, Pakistan
| | - Fatima Ismail
- Department of Biochemistry, The Islamia University of Bahawalpur, Bahawalpur, 63100, Punjab, Pakistan.
- The Islamia University of Bahawalpur, Bahawalpur, 63100, Punjab, Pakistan.
| | - Maryem Safdar
- University College of Conventional Medicine, The Islamia University of Bahawalpur, Bahawalpur, 63100, Punjab, Pakistan
- The Islamia University of Bahawalpur, Bahawalpur, 63100, Punjab, Pakistan
| | - Muhammad Imran
- Institute of Advanced Study, Shenzhen University, Shenzhen, 5180600, Guangdong Province, China.
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Méndez-Zamora A, Diaz-Vidal T, Robles-Machuca M, Pereira-Santana A, Casas-Godoy L. Unveiling potential PET degrading eukaryotes through in silico bioprospecting of PETases. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 948:174978. [PMID: 39047840 DOI: 10.1016/j.scitotenv.2024.174978] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/05/2024] [Revised: 07/05/2024] [Accepted: 07/21/2024] [Indexed: 07/27/2024]
Abstract
This study addresses the environmental problem of PET plastic through in silico bioprospecting for the identification and experimental validation of novel PET degrading eukaryotes through the in silico bioprospectingI of PETases, employing a methodology that combines Hidden Markov Models (HMMs), clustering techniques, molecular docking, and dynamic simulations. A total of 424 putative PETase sequences were identified from 219 eukaryotic organisms, highlighting six sequences with low affinity energies. The Aspergillus luchuensis sequence showed the lowest Gibbs free energy and exhibited stability at different temperatures in molecular dynamics assays. Experimental validation, through a plate clearance assay and HPLC, confirmed PETase activity in three wild-type fungal strains, with A. luchuensis showing the highest efficiency. The results obtained demonstrate the effectiveness of combining computational and experimental approaches as proof of concept to discover and validate eukaryotes with PET-degrading capabilities opening new perspectives for the sustainable management of this type of waste and contributing to its environmental mitigation.
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Affiliation(s)
- Andrés Méndez-Zamora
- Centro de Investigación y Asistencia en Tecnología y Diseño del Estado de Jalisco (CIATEJ), Avenida Normalistas 800, Col. Colinas de la Normal, C.P. 44270 Guadalajara, Jalisco, Mexico
| | - Tania Diaz-Vidal
- Centro de Investigación y Asistencia en Tecnología y Diseño del Estado de Jalisco (CIATEJ), Avenida Normalistas 800, Col. Colinas de la Normal, C.P. 44270 Guadalajara, Jalisco, Mexico
| | - Marcela Robles-Machuca
- Tecnologia de alimentos, Secretaría de Investigación y Posgrado, Universidad Autónoma de Nayarit, Ciudad de la Cultura s/n, C.P. 63000 Tepic, Nayarit, Mexico
| | - Alejandro Pereira-Santana
- CONAHCYT-Centro de Investigación y Asistencia en Tecnología y Diseño del Estado de Jalisco, Parque Científico Tecnológico de Yucatán, 97302 Mérida, Yucatán, Mexico.
| | - Leticia Casas-Godoy
- CONAHCYT-Centro de Investigación y Asistencia en Tecnología y Diseño del Estado de Jalisco, Camino Arenero 1227, El Bajío, 45019 Zapopan, Jalisco, Mexico.
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Fang C, Yang Y, Zhang S, He Y, Pan S, Zhou L, Wang J, Yang H. Unveiling the impact of microplastics with distinct polymer types and concentrations on tidal sediment microbiome and nitrogen cycling. JOURNAL OF HAZARDOUS MATERIALS 2024; 472:134387. [PMID: 38723479 DOI: 10.1016/j.jhazmat.2024.134387] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/28/2023] [Revised: 04/17/2024] [Accepted: 04/21/2024] [Indexed: 05/30/2024]
Abstract
Microplastics (MPs) are distributed widely in the ocean surface waters and sediments. Increasing MPs contamination in intertidal zone profoundly impacts microbial ecosystem services and biogeochemical process. Little is known about the response of tidal sediment microbiome to MPs. We conducted a 30-day laboratory microcosm study using five polymers (PE, PBS, PC, PLA and PET) at three concentrations (1 %, 2 % and 5 %, w/w). High throughput sequencing of 16 S rRNA, qPCR and enzyme activity test were applied to demonstrate the response of microbial community and nitrogen cycling functional genes to MPs. MPs reduced the microbial alpha diversity and the microbial dissimilarity while the effects of PLA-MPs were concentration dependent. LEfSe analysis indicated that the Proteobacteria predominated for all MP treatments. Mantel's test, RDA and correlation analysis implied that pH may be the key environmental factor for causing microbial alterations. MPs enhanced nitrogen fixation in tidal sediment. PLA levels of 1 % but not 5 % produced the most significant effects in nitrogen cycling functional microbiota and genes. PLS-PM revealed that impacts of MPs on tidal sediment microbial communities and nitrogen cycling were dominated by indirect effects. Our study deepened understanding and filled the knowledge gap of MP contaminants affecting tidal sediment microbial nitrogen cycling.
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Affiliation(s)
- Chang Fang
- College of Marine Sciences, South China Agricultural University, Guangzhou 510642, China; Zhongshan Innovation Center of South China Agricultural University, Zhongshan 528400, China
| | - Yuting Yang
- College of Marine Sciences, South China Agricultural University, Guangzhou 510642, China; Zhongshan Innovation Center of South China Agricultural University, Zhongshan 528400, China
| | - Shuping Zhang
- College of Marine Sciences, South China Agricultural University, Guangzhou 510642, China; Zhongshan Innovation Center of South China Agricultural University, Zhongshan 528400, China
| | - Yinglin He
- College of Marine Sciences, South China Agricultural University, Guangzhou 510642, China; Zhongshan Innovation Center of South China Agricultural University, Zhongshan 528400, China
| | - Sentao Pan
- College of Marine Sciences, South China Agricultural University, Guangzhou 510642, China; Zhongshan Innovation Center of South China Agricultural University, Zhongshan 528400, China
| | - Lei Zhou
- College of Marine Sciences, South China Agricultural University, Guangzhou 510642, China
| | - Jun Wang
- College of Marine Sciences, South China Agricultural University, Guangzhou 510642, China
| | - Huirong Yang
- College of Marine Sciences, South China Agricultural University, Guangzhou 510642, China; Zhongshan Innovation Center of South China Agricultural University, Zhongshan 528400, China.
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9
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Xiong Z, Zhang Y, Chen X, Sha A, Xiao W, Luo Y, Han J, Li Q. Soil Microplastic Pollution and Microbial Breeding Techniques for Green Degradation: A Review. Microorganisms 2024; 12:1147. [PMID: 38930528 PMCID: PMC11205638 DOI: 10.3390/microorganisms12061147] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/14/2024] [Revised: 05/28/2024] [Accepted: 05/30/2024] [Indexed: 06/28/2024] Open
Abstract
Microplastics (MPs), found in many places around the world, are thought to be more detrimental than other forms of plastics. At present, physical, chemical, and biological methods are being used to break down MPs. Compared with physical and chemical methods, biodegradation methods have been extensively studied by scholars because of their advantages of greenness and sustainability. There have been numerous reports in recent years summarizing the microorganisms capable of degrading MPs. However, there is a noticeable absence of a systematic summary on the technology for breeding strains that can degrade MPs. This paper summarizes the strain-breeding technology of MP-degrading strains for the first time in a systematic way, which provides a new idea for the breeding of efficient MP-degrading strains. Meanwhile, potential techniques for breeding bacteria that can degrade MPs are proposed, providing a new direction for selecting and breeding MP-degrading bacteria in the future. In addition, this paper reviews the sources and pollution status of soil MPs, discusses the current challenges related to the biodegradation of MPs, and emphasizes the safety of MP biodegradation.
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Affiliation(s)
| | | | | | | | | | | | - Jialiang Han
- Key Laboratory of Coarse Cereal Processing, Ministry of Agriculture and Rural Affairs, Sichuan Engineering & Technology Research Center of Coarse Cereal Industrialization, School of Food and Biological Engineering, Chengdu University, No. 2025, Chengluo Avenue, Longquanyi District, Chengdu 610106, China; (Z.X.); (Y.Z.); (X.C.); (A.S.); (W.X.); (Y.L.)
| | - Qiang Li
- Key Laboratory of Coarse Cereal Processing, Ministry of Agriculture and Rural Affairs, Sichuan Engineering & Technology Research Center of Coarse Cereal Industrialization, School of Food and Biological Engineering, Chengdu University, No. 2025, Chengluo Avenue, Longquanyi District, Chengdu 610106, China; (Z.X.); (Y.Z.); (X.C.); (A.S.); (W.X.); (Y.L.)
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10
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Khatua S, Simal-Gandara J, Acharya K. Myco-remediation of plastic pollution: current knowledge and future prospects. Biodegradation 2024; 35:249-279. [PMID: 37665521 PMCID: PMC10950981 DOI: 10.1007/s10532-023-10053-2] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/12/2023] [Accepted: 08/15/2023] [Indexed: 09/05/2023]
Abstract
To date, enumerable fungi have been reported to participate in the biodegradation of several notorious plastic materials following their isolation from soil of plastic-dumping sites, marine water, waste of mulch films, landfills, plant parts and gut of wax moth. The general mechanism begins with formation of hydrophobin and biofilm proceding to secretion of specific plastic degarding enzymes (peroxidase, hydrolase, protease and urease), penetration of three dimensional substrates and mineralization of plastic polymers into harmless products. As a result, several synthetic polymers including polyethylene, polystyrene, polypropylene, polyvinyl chloride, polyurethane and/or bio-degradable plastics have been validated to deteriorate within months through the action of a wide variety of fungal strains predominantly Ascomycota (Alternaria, Aspergillus, Cladosporium, Fusarium, Penicillium spp.). Understanding the potential and mode of operation of these organisms is thus of prime importance inspiring us to furnish an up to date view on all the presently known fungal strains claimed to mitigate the plastic waste problem. Future research henceforth needs to be directed towards metagenomic approach to distinguish polymer degrading microbial diversity followed by bio-augmentation to build fascinating future of waste disposal.
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Affiliation(s)
- Somanjana Khatua
- Department of Botany, Faculty of Science, University of Allahabad, Prayagraj, Uttar Pradesh, 211002, India
| | - Jesus Simal-Gandara
- Nutrition and Bromatology Group, Department of Analytical Chemistry and Food Science, Faculty of Science, Universidade de Vigo, 32004, Ourense, Spain.
| | - Krishnendu Acharya
- Molecular and Applied Mycology and Plant Pathology Laboratory, Department of Botany, Centre of Advanced Study, University of Calcutta, 35, Ballygunge Circular Road, Kolkata, West Bengal, 700019, India.
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11
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Sathiyabama M, Boomija RV, Sathiyamoorthy T, Mathivanan N, Balaji R. Mycodegradation of low-density polyethylene by Cladosporium sphaerospermum, isolated from platisphere. Sci Rep 2024; 14:8351. [PMID: 38594512 PMCID: PMC11004025 DOI: 10.1038/s41598-024-59032-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/21/2023] [Accepted: 04/05/2024] [Indexed: 04/11/2024] Open
Abstract
Plastic accumulation is a severe threat to the environment due to its resistivity to thermal, mechanical and biological processes. In recent years, microbial degradation of plastic waste disposal is of interest because of its eco-friendly nature. In this study, a total of 33 fungi were isolated from the plastisphere and out of which 28 fungal species showed halo zone of clearance in agarized LDPE media. The fungus showing highest zone of clearance was further used to evaluate its degradation potential. Based on morphological and molecular technique, the fungus was identified as Cladosporium sphaerospermum. The biodegradation of LDPE by C. sphaerospermum was evaluated by various methods. The exposure of LDPE with C. sphaerospermum resulted in weight loss (15.23%) in seven days, higher reduction rate (0.0224/day) and lower half-life (30.93 days). FTIR analysis showed changes in functional group and increased carbonyl index in LDPE treated with C. sphaerospermum. SEMimages evidenced the formation of pits, surface aberrations and grooves on the LDPE film treated with the fungus whereas the untreated control LDPE film showed no change. AFM analysis confirmed the surface changes and roughness in fungus treated LDPE film. This might be due to the extracellular lignolytic enzymes secreted by C. sphaerospermum grown on LDPE. The degradation of polyethylene by Short chain alkanes such as dodecane, hexasiloxane and silane were identified in the extract of fungus incubated with LDPE film through GC-MS analysis which might be due to the degradation of LDPE film by C. sphaerospermum. This was the first report on the LDPE degradation by C. sphaerospermum in very short duration which enables green scavenging of plastic wastes.
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Affiliation(s)
- M Sathiyabama
- Department of Botany, School of Life Sciences, Bharathidasan University, Tiruchirappalli, Tamil Nadu, 620 024, India.
| | - R V Boomija
- Department of Botany, School of Life Sciences, Bharathidasan University, Tiruchirappalli, Tamil Nadu, 620 024, India
| | - T Sathiyamoorthy
- CAS in Botany, University of Madras, Chennai, Tamil Nadu, 600025, India
| | - N Mathivanan
- CAS in Botany, University of Madras, Chennai, Tamil Nadu, 600025, India
| | - R Balaji
- CAS in Botany, University of Madras, Chennai, Tamil Nadu, 600025, India
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12
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Xue Z, Xiong Z, Wei Z, Wang L, Xu M. Interactive Effects of Polyethylene Microplastics and Cadmium on Growth of Microcystis aeruginosa. TOXICS 2024; 12:254. [PMID: 38668477 PMCID: PMC11053517 DOI: 10.3390/toxics12040254] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/12/2024] [Revised: 03/26/2024] [Accepted: 03/26/2024] [Indexed: 04/29/2024]
Abstract
Polyethylene (PE) is a common component of microplastic pollution, and cadmium (Cd) is a prevalent pollutant in contaminated freshwater bodies in China. Among cyanobacteria, Microcystis aeruginosa (M. aeruginosa) plays a crucial role in the formation of algal blooms in these water systems. However, there has been limited research on how microplastics and heavy metals affect cyanobacteria ecologically. This study aimed to evaluate the physiological effects of individual and combined exposure to Cd pollutants and microplastics on M. aeruginosa. The solutions containing 13 µm and 6.5 µm PE particles (100 mg/L) with Cd were used in the research. The results indicated that the combined treatment led to a significant inhibition of chlorophyll a content, dropping to zero by day 5. The treated groups exhibited higher microcystins (MCs) content compared to the control group, suggesting increased MCs release due to pollutant exposure. Interestingly, the adsorption of heavy metals by microplastics partially alleviated the toxicity of heavy metals on algal cells. Moreover, the combined treatment significantly suppressed catalase (CAT) activity compared to Cd treatment, indicating a synergistic effect that led to greater oxidative stress. Overall, this study provides valuable insights into the impact of PE and Cd pollution on freshwater ecosystems, elucidates the physiological responses of cyanobacteria to these pollutants, and establishes a theoretical groundwork for addressing complex water pollution using cyanobacteria-based strategies.
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Affiliation(s)
- Zihan Xue
- Miami College, Jinming Campus, Henan University, Kaifeng 475004, China; (Z.X.); (Z.X.); (Z.W.)
| | - Zetao Xiong
- Miami College, Jinming Campus, Henan University, Kaifeng 475004, China; (Z.X.); (Z.X.); (Z.W.)
| | - Zhangdong Wei
- Miami College, Jinming Campus, Henan University, Kaifeng 475004, China; (Z.X.); (Z.X.); (Z.W.)
| | - Lin Wang
- Miami College, Jinming Campus, Henan University, Kaifeng 475004, China; (Z.X.); (Z.X.); (Z.W.)
- College of Geography and Environmental Science, Jinming Campus, Henan University, Kaifeng 475004, China
- Henan Key Laboratory of Earth System Observation and Modeling, Jinming Campus, Henan University, Kaifeng 475004, China
| | - Ming Xu
- College of Geography and Environmental Science, Jinming Campus, Henan University, Kaifeng 475004, China
- Henan Key Laboratory of Earth System Observation and Modeling, Jinming Campus, Henan University, Kaifeng 475004, China
- Guangdong-Hong Kong Joint Laboratory for Carbon Neutrality, Jiangmen Laboratory of Carbon Science and Technology, Jiangmen 529199, China
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13
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L E, Wilfred N, S K, Halder G, Haldar D, Patel AK, Singhania RR, Pandey A. Biodegradation of microplastics: Advancement in the strategic approaches towards prevention of its accumulation and harmful effects. CHEMOSPHERE 2024; 346:140661. [PMID: 37951399 DOI: 10.1016/j.chemosphere.2023.140661] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/06/2023] [Revised: 11/05/2023] [Accepted: 11/06/2023] [Indexed: 11/14/2023]
Abstract
Microplastics (MPs) are plastic particles in a size ranging from 1 mm to 5 mm in diameter, and are formed by the breakdown of plastics from different sources. They are emerging environmental pollutants, and pose a great threat to living organisms. Improper disposal, inadequate recycling, and excessive use of plastic led to the accumulation of MP in the environment. The degradation of MP can be done either biotically or abiotically. In view of that, this article discusses the molecular mechanisms that involve bacteria, fungi, and enzymes to degrade the MP polymers as the primary objective. As per as abiotic degradation is concerned, two different modes of MP degradation were discussed in order to justify the effectiveness of biotic degradation. Finally, this review is concluded with the challenges and future perspectives of MP biodegradation based on the existing research gaps. The main objective of this article is to provide the readers with clear insight, and ideas about the recent advancements in MP biodegradation.
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Affiliation(s)
- Emisha L
- Division of Biotechnology, Karunya Institute of Technology and Sciences, Coimbatore, 641114, India
| | - Nishitha Wilfred
- Division of Biotechnology, Karunya Institute of Technology and Sciences, Coimbatore, 641114, India
| | - Kavitha S
- Division of Biotechnology, Karunya Institute of Technology and Sciences, Coimbatore, 641114, India
| | - Gopinath Halder
- Department of Chemical Engineering, National Institute of Technology Durgapur, Durgapur, 713209, West Bengal, India
| | - Dibyajyoti Haldar
- Division of Biotechnology, Karunya Institute of Technology and Sciences, Coimbatore, 641114, India.
| | - Anil Kumar Patel
- Institute of Aquatic Science and Technology, National Kaohsiung University of Science and Technology, Kaohsiung City, Taiwan; Centre for Energy and Environmental Sustainability, Lucknow, 226029, India
| | - Reeta Rani Singhania
- Institute of Aquatic Science and Technology, National Kaohsiung University of Science and Technology, Kaohsiung City, Taiwan.
| | - Ashok Pandey
- Centre for Energy and Environmental Sustainability, Lucknow, 226029, India; Centre for Innovation and Translational Research, CSIR-Indian Institute of Toxicology Research, Lucknow, 226 001, India; Kyung Hee University, Kyung Hee Dae Ro 26, Seoul, 02447, Republic of Korea; Sustainability Cluster, School of Engineering, University of Petroleum and Energy Studies, Dehradun, 248 007, Uttarakhand, India
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14
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He Y, Deng X, Jiang L, Hao L, Shi Y, Lyu M, Zhang L, Wang S. Current advances, challenges and strategies for enhancing the biodegradation of plastic waste. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 906:167850. [PMID: 37844647 DOI: 10.1016/j.scitotenv.2023.167850] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/18/2023] [Revised: 10/13/2023] [Accepted: 10/13/2023] [Indexed: 10/18/2023]
Abstract
Due to its highly recalcitrant nature, the growing accumulation of plastic waste is becoming an urgent global problem. Biodegradation is one of the best possible approaches for the treatment of plastic waste in an environmentally friendly manner, but our current knowledge on the underlying mechanisms, as well as strategies for the development and enhancement of plastic biodegradation are still limited. This review aims to provide an updated and comprehensive overview of current research on plastic waste biodegradation, focusing on enhancement strategies with ongoing research significance, including the mining of highly efficient plastic-degrading microorganisms/enzymes, utilization of synergistic additives, novel pretreatment approaches, modification via molecular engineering, and construction of bacterial/enzyme consortia systems. Studying these strategies can (i) enrich the high-performance microbial/enzymes toolbox for plastic degradation, (ii) provide methods for recycling and upgrading plastics, as well as (iii) enable further molecular modification and functional optimization of plastic-degrading enzymes to realize economically viable biodegradation of plastics. To the best of our knowledge, this is the first review to discuss in detail strategies to enhance biodegradation of plastics. Finally, some recommendations for future research on plastic biodegradation are listed, hoping to provide the best direction for tackling the plastic waste dilemma in the future.
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Affiliation(s)
- Yuehui He
- Jiangsu Key Laboratory of Marine Bioresources and Environment/Jiangsu Key Laboratory of Marine, Biotechnology, Jiangsu Ocean University, Lianyungang 222005, China; Co-Innovation Center of Jiangsu Marine Bio-Industry Technology, Jiangsu Ocean University, Lianyungang 222005, China; College of Marine Food and Bioengineering, Jiangsu Ocean University, Lianyungang 222005, China
| | - Xilong Deng
- College of Marine Food and Bioengineering, Jiangsu Ocean University, Lianyungang 222005, China
| | - Lei Jiang
- College of Marine Food and Bioengineering, Jiangsu Ocean University, Lianyungang 222005, China
| | - Lijuan Hao
- College of Marine Food and Bioengineering, Jiangsu Ocean University, Lianyungang 222005, China
| | - Yong Shi
- College of Marine Food and Bioengineering, Jiangsu Ocean University, Lianyungang 222005, China
| | - Mingsheng Lyu
- Jiangsu Key Laboratory of Marine Bioresources and Environment/Jiangsu Key Laboratory of Marine, Biotechnology, Jiangsu Ocean University, Lianyungang 222005, China; Co-Innovation Center of Jiangsu Marine Bio-Industry Technology, Jiangsu Ocean University, Lianyungang 222005, China; College of Marine Food and Bioengineering, Jiangsu Ocean University, Lianyungang 222005, China
| | - Lei Zhang
- Jiangsu Key Laboratory of Marine Bioresources and Environment/Jiangsu Key Laboratory of Marine, Biotechnology, Jiangsu Ocean University, Lianyungang 222005, China; Co-Innovation Center of Jiangsu Marine Bio-Industry Technology, Jiangsu Ocean University, Lianyungang 222005, China; College of Marine Food and Bioengineering, Jiangsu Ocean University, Lianyungang 222005, China.
| | - Shujun Wang
- Jiangsu Key Laboratory of Marine Bioresources and Environment/Jiangsu Key Laboratory of Marine, Biotechnology, Jiangsu Ocean University, Lianyungang 222005, China; Co-Innovation Center of Jiangsu Marine Bio-Industry Technology, Jiangsu Ocean University, Lianyungang 222005, China; College of Marine Food and Bioengineering, Jiangsu Ocean University, Lianyungang 222005, China.
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15
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Oluwoye I, Machuca LL, Higgins S, Suh S, Galloway TS, Halley P, Tanaka S, Iannuzzi M. Degradation and lifetime prediction of plastics in subsea and offshore infrastructures. THE SCIENCE OF THE TOTAL ENVIRONMENT 2023; 904:166719. [PMID: 37673242 DOI: 10.1016/j.scitotenv.2023.166719] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/29/2023] [Revised: 08/25/2023] [Accepted: 08/29/2023] [Indexed: 09/08/2023]
Abstract
Engineering and civil developments have relied on synthetic polymers and plastics (including polyethylene, polypropylene, polyamide, etc.) for decades, especially where their durability protects engineering structures against corrosion and other environmental stimuli. Offshore oil and gas infrastructure and renewable energy platforms are typical examples, where these plastics (100,000 s of metric tonnes worldwide) are used primarily as functional material to protect metallic flowlines and subsea equipment against seawater corrosion. Despite this, the current literature on polymers is limited to sea-surface environments, and a model for subsea degradation of plastics is needed. In this review, we collate relevant studies on the degradation of plastics and synthetic polymers in marine environments to gain insight into the fate of these materials when left in subsea conditions. We present a new mathematical model that accounts for various physicochemical changes in the oceanic environment as a function of depth to predict the lifespan of synthetic plastics and the possible formation of plastic debris, e.g., microplastics. We found that the degradation rate of the plastics decreases significantly as a function of water depth and can be estimated quantitatively by the mathematical model that accounts for the effect (and sensitivity) of geographical location, temperature, light intensity, hydrostatic pressure, and marine sediments. For instance, it takes a subsea polyethylene coating about 800 years to degrade on ocean floor (as opposed to <400 years in shallow coastal waters), generating 1000s of particles per g of degradation under certain conditions. Our results demonstrate how suspended sediments in the water column are likely to compensate for the decreasing depth-corrected degradation rates, resulting in surface abrasion and the formation of plastic debris such as microplastics. This review, and the complementing data, will be significant for the environmental impact assessment of plastics in subsea infrastructures. Moreover, as these infrastructures reach the end of their service life, the management of the plastic components becomes of great interest to environmental regulators, industry, and the community, considering the known sizeable impacts of plastics on global biogeochemical cycles.
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Affiliation(s)
- Ibukun Oluwoye
- Curtin Corrosion Centre, Western Australian School of Mines: Minerals, Energy and Chemical Engineering, Curtin University, Perth, Australia; Graduate School of Global Environmental Studies, Kyoto University, Yoshida-Honmachi, Sakyo-ku, Kyoto, Japan.
| | - Laura L Machuca
- Curtin Corrosion Centre, Western Australian School of Mines: Minerals, Energy and Chemical Engineering, Curtin University, Perth, Australia
| | - Stuart Higgins
- Curtin University, GPO Box U1987, Perth, WA 6824, Australia
| | - Sangwon Suh
- Bren School of Environmental Science and Management, University of California, Santa Barbara, CA 93106, USA
| | - Tamara S Galloway
- College of Life and Environmental Sciences, University of Exeter, Exeter EX4 4QD, UK
| | - Peter Halley
- School of Chemical Engineering, The University of Queensland, Brisbane, Queensland 4072, Australia
| | - Shuhei Tanaka
- Graduate School of Global Environmental Studies, Kyoto University, Yoshida-Honmachi, Sakyo-ku, Kyoto, Japan
| | - Mariano Iannuzzi
- Curtin Corrosion Centre, Western Australian School of Mines: Minerals, Energy and Chemical Engineering, Curtin University, Perth, Australia
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16
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Siddiqui R, Khan NA. Is the gut microbiome of insects a potential source to meet UN sustainable development goals to eliminate plastic pollution? ENVIRONMENTAL MICROBIOLOGY REPORTS 2023; 15:455-458. [PMID: 37688332 PMCID: PMC10667635 DOI: 10.1111/1758-2229.13166] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/17/2023] [Accepted: 05/05/2023] [Indexed: 09/10/2023]
Abstract
As insects such as cockroaches can endure high radiation, flourish in unsanitary circumstances, thrive on germ-infested feed, and can even digest the organic polymer cellulose, the gut microbiota of these species likely produces enzymes contributing to their ability to digest a variety of materials. The use of cockroaches as a bio-resource to eliminate plastic is discussed. We explore whether species such as cockroaches are a potential bio-resource to eliminate plastic pollution and contribute to the sustainable development goals adopted by the United Nations as well as the global community to reduce and/or eliminate plastic pollution.
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Affiliation(s)
- Ruqaiyyah Siddiqui
- College of Arts and SciencesAmerican University of SharjahSharjahUnited Arab Emirates
- Department of Medical Biology, Faculty of MedicineIstinye UniversityIstanbulTurkey
| | - Naveed Ahmed Khan
- Department of Medical Biology, Faculty of MedicineIstinye UniversityIstanbulTurkey
- Department of Clinical Sciences, College of MedicineUniversity of SharjahSharjahUnited Arab Emirates
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17
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Bautista-Zamudio PA, Flórez-Restrepo MA, López-Legarda X, Monroy-Giraldo LC, Segura-Sánchez F. Biodegradation of plastics by white-rot fungi: A review. THE SCIENCE OF THE TOTAL ENVIRONMENT 2023; 901:165950. [PMID: 37536592 DOI: 10.1016/j.scitotenv.2023.165950] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/29/2023] [Revised: 07/18/2023] [Accepted: 07/30/2023] [Indexed: 08/05/2023]
Abstract
Plastic pollution is one of the most environmental problems in the last two centuries, because of their excessive usage and their rapidly increasing production, which overcome the ability of natural degradation. Moreover, this problem become an escalating environmental issue caused by inadequate disposal, ineffective or nonexistent waste collection methods, and a lack of appropriate measures to deal with the problem, such as incineration and landfilling. Consequently, plastic wastes have become so ubiquitous and have accumulated in the environment impacting ecosystems and wildlife. The above, enhances the urgent need to explore alternative approaches that can effectively reduce waste without causing harsh environmental consequences. For example, white-rot fungi are a promising alternative to deal with the problem. These fungi produce ligninolytic enzymes able to break down the molecular structures of plastics, making them more bioavailable and allowing their degradation process, thereby mitigating waste accumulation. Over the years, several research studies have focused on the utilization of white-rot fungi to degrade plastics. This review presents a summary of plastic degradation biochemistry by white-rot fungi and the function of their ligninolytic enzymes. It also includes a collection of different research studies involving white-rot fungi to degrade plastic, their enzymes, the techniques used and the obtained results. Also, this highlights the significance of pre-treatments and the study of plastic blends with natural fibers or metallic ions, which have shown higher levels of degradation. Finally, it raises the limitations of the biotechnological processes and the prospects for future studies.
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Affiliation(s)
- Paula Andrea Bautista-Zamudio
- Grupo Biopolimer, Facultad de Ciencias Farmacéuticas y Alimentarias, Universidad de Antioquia UdeA, Calle 70 No. 52 - 21, Medellín 050010, Colombia
| | - María Alejandra Flórez-Restrepo
- Grupo Biopolimer, Facultad de Ciencias Farmacéuticas y Alimentarias, Universidad de Antioquia UdeA, Calle 70 No. 52 - 21, Medellín 050010, Colombia
| | - Xiomara López-Legarda
- Grupo Biopolimer, Facultad de Ciencias Farmacéuticas y Alimentarias, Universidad de Antioquia UdeA, Calle 70 No. 52 - 21, Medellín 050010, Colombia.
| | - Leidy Carolina Monroy-Giraldo
- Grupo Biopolimer, Facultad de Ciencias Farmacéuticas y Alimentarias, Universidad de Antioquia UdeA, Calle 70 No. 52 - 21, Medellín 050010, Colombia
| | - Freimar Segura-Sánchez
- Grupo Biopolimer, Facultad de Ciencias Farmacéuticas y Alimentarias, Universidad de Antioquia UdeA, Calle 70 No. 52 - 21, Medellín 050010, Colombia
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18
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Fang C, He Y, Yang Y, Fu B, Pan S, Jiao F, Wang J, Yang H. Laboratory tidal microcosm deciphers responses of sediment archaeal and bacterial communities to microplastic exposure. JOURNAL OF HAZARDOUS MATERIALS 2023; 458:131813. [PMID: 37339576 DOI: 10.1016/j.jhazmat.2023.131813] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/03/2023] [Revised: 05/24/2023] [Accepted: 06/07/2023] [Indexed: 06/22/2023]
Abstract
Microplastics (MPs) are 1-5 mm plastic particles that are serious global contaminants distributed throughout marine ecosystems. However, their impact on intertidal sediment microbial communities is poorly understood. In this study, we conducted a 30-day laboratory tidal microcosm experiment to investigate the effects of MPs on microbial communities. Specifically, we used the biodegradable polymers polylactic acid (PLA) and polybutylene succinate (PBS), as well as the conventional polymers polyethylene terephthalate (PET), polycarbonate (PC), and polyethylene (PE). Treatments with different concentrations (1-5%, w/w) of PLA- and PE-MPs were also included. We analyzed taxonomic variations in archaeal and bacterial communities using 16S rRNA high-throughput sequencing. PLA-MPs at concentrations of 1% (w/w) rapidly altered microbiome composition. Total organic carbon and nitrite nitrogen were the key physicochemical factors and urease was the major enzyme shaping MP-exposed sediment microbial communities. Stochastic processes predominated in microbial assembly and the addition of biodegradable MPs enhanced the contribution of ecological selections. The major keystone taxa of archaea and bacteria were Nitrososphaeria and Alphaproteobacteria, respectively. MPs exposure had less effect on archaeal functions while nitrogen cycling decreased in PLA-MPs treatments. These findings expanded the current understanding of the mechanism and pattern that MPs affect sediment microbial communities.
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Affiliation(s)
- Chang Fang
- College of Marine Sciences, South China Agricultural University, Guangzhou 510642, China; Zhongshan Innovation Center of South China Agricultural University, Zhongshan 528400, China
| | - Yinglin He
- College of Marine Sciences, South China Agricultural University, Guangzhou 510642, China; Zhongshan Innovation Center of South China Agricultural University, Zhongshan 528400, China
| | - Yuting Yang
- College of Marine Sciences, South China Agricultural University, Guangzhou 510642, China; Zhongshan Innovation Center of South China Agricultural University, Zhongshan 528400, China
| | - Bing Fu
- College of Marine Sciences, South China Agricultural University, Guangzhou 510642, China; Zhongshan Innovation Center of South China Agricultural University, Zhongshan 528400, China
| | - Sentao Pan
- College of Marine Sciences, South China Agricultural University, Guangzhou 510642, China; Zhongshan Innovation Center of South China Agricultural University, Zhongshan 528400, China
| | - Fang Jiao
- College of Marine Sciences, South China Agricultural University, Guangzhou 510642, China; Zhongshan Innovation Center of South China Agricultural University, Zhongshan 528400, China
| | - Jun Wang
- College of Marine Sciences, South China Agricultural University, Guangzhou 510642, China
| | - Huirong Yang
- College of Marine Sciences, South China Agricultural University, Guangzhou 510642, China; Zhongshan Innovation Center of South China Agricultural University, Zhongshan 528400, China.
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19
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Zhao S, Zhang J. Microplastics in soils during the COVID-19 pandemic: Sources, migration and transformations, and remediation technologies. THE SCIENCE OF THE TOTAL ENVIRONMENT 2023; 883:163700. [PMID: 37105487 PMCID: PMC10125914 DOI: 10.1016/j.scitotenv.2023.163700] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/26/2023] [Revised: 03/26/2023] [Accepted: 04/19/2023] [Indexed: 05/03/2023]
Abstract
The COVID-19 pandemic has led to a notable upsurge of 5-10 % in global plastic production, which could have potential implications on the soil quality through increased microplastics (MPs) content. The elevated levels of MPs in the soil poses a significant threat to both the environment and human health, hence necessitating the remediation of MPs in the environment. Despite the significant attention given to MPs remediation in aqueous environments, less consideration has been given to MPs remediation in the soil. Consequently, this review highlights the major sources of MPs in the soil, their migration and transformation behaviors during the COVID-19 pandemic, and emphasizes the importance of utilizing remediation technologies such as phytoremediation, thermal treatment, microbial degradation, and photodegradation for MPs in the soil. Furthermore, this review provides a prospective outlook on potential future remediation methods for MPs in the soil. Although the COVID-19 pandemic is nearing its end, the long-term impact of MPs on the soil remains, making this review a valuable reference for the remediation of MPs in the post-pandemic soil.
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Affiliation(s)
- Shan Zhao
- College of Ocean Science and Engineering, Shanghai Maritime University, Shanghai 201306, China; College of Civil Engineering, Tongji University, Shanghai 200092, China.
| | - Jian Zhang
- College of Ocean Science and Engineering, Shanghai Maritime University, Shanghai 201306, China
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20
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Gollan M, Black G, Munoz-Munoz J. A computational approach to optimising laccase-mediated polyethylene oxidation through carbohydrate-binding module fusion. BMC Biotechnol 2023; 23:18. [PMID: 37415113 PMCID: PMC10324223 DOI: 10.1186/s12896-023-00787-5] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2022] [Accepted: 06/15/2023] [Indexed: 07/08/2023] Open
Abstract
Plastic pollution is a major global concern to the health and wellbeing of all terrestrial and marine life. However, no sustainable method for waste management is currently viable. This study addresses the optimisation of microbial enzymatic polyethylene oxidation through rational engineering of laccases with carbohydrate-binding module (CBM) domains. An explorative bioinformatic approach was taken for high-throughput screening of candidate laccases and CBM domains, representing an exemplar workflow for future engineering research. Molecular docking simulated polyethylene binding whilst a deep-learning algorithm predicted catalytic activity. Protein properties were examined to interpret the mechanisms behind laccase-polyethylene binding. The incorporation of flexible GGGGS(x3) hinges were found to improve putative polyethylene binding of laccases. Whilst CBM1 family domains were predicted to bind polyethylene, they were suggested to detriment laccase-polyethylene associations. In contrast, CBM2 domains reported improved polyethylene binding and may thus optimise laccase oxidation. Interactions between CBM domains, linkers, and polyethylene hydrocarbons were heavily reliant on hydrophobicity. Preliminary polyethylene oxidation is considered a necessity for consequent microbial uptake and assimilation. However, slow oxidation and depolymerisation rates inhibit the large-scale industrial implementation of bioremediation within waste management systems. The optimised polyethylene oxidation of CBM2-engineered laccases represents a significant advancement towards a sustainable method of complete plastic breakdown. Results of this study offer a rapid, accessible workflow for further research into exoenzyme optimisation whilst elucidating mechanisms behind the laccase-polyethylene interaction.
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Affiliation(s)
- Michael Gollan
- Department of Applied Sciences, Northumbria University, Newcastle Upon Tyne NE1 8ST, Tyne and Wear, England, United Kingdom.
| | - Gary Black
- Department of Applied Sciences, Northumbria University, Newcastle Upon Tyne NE1 8ST, Tyne and Wear, England, United Kingdom
| | - Jose Munoz-Munoz
- Department of Applied Sciences, Northumbria University, Newcastle Upon Tyne NE1 8ST, Tyne and Wear, England, United Kingdom
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21
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Thakur B, Singh J, Singh J, Angmo D, Vig AP. Biodegradation of different types of microplastics: Molecular mechanism and degradation efficiency. THE SCIENCE OF THE TOTAL ENVIRONMENT 2023; 877:162912. [PMID: 36933716 DOI: 10.1016/j.scitotenv.2023.162912] [Citation(s) in RCA: 26] [Impact Index Per Article: 26.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/25/2022] [Revised: 03/06/2023] [Accepted: 03/13/2023] [Indexed: 05/06/2023]
Abstract
Microplastics are widely distributed and a major pollutant in our ecosystem. Microplastics (MPs) are very small size plastic (<5 mm) present in environment, which comes from industrial, agricultural and household wastes. Plastic particles are more durable due to the presence of plasticizers and chemicals or additives. These plastics pollutants are more resistant to degradation. Inadequate recycling and excessive use of plastics lead to a large amount of waste accumulating in the terrestrial ecosystem, causing a risk to humans and animals. Thus, there is an urgent need to control microplastic pollution by employing different microorganisms to overcome this hazardous issue for the environment. Biological degradation depends upon different aspects, including chemical structure, functional group, molecular weight, crystallinity and additives. Molecular mechanisms for degradation of MPs through various enzymes have not extremely studied. It is necessary to degrade the MPs and overcome this problem. This review approaches different molecular mechanisms to degrade different types of microplastics and summarize the degradation efficiency of different types of bacteria, algae and fungal strains. The present study also summarizes the potential of microorganisms to degrade different polymers and the role of different enzymes in degradation of microplastics. To the outstanding of our awareness, this is the first article devoted to the role of microorganisms with their degradation efficiency. Furthermore, it also summarizes the role of intracellular and extracellular enzymes in biological degradation mechanism of microplastics.
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Affiliation(s)
- Babita Thakur
- Department of Microbiology, School of Bioengineering and Biosciences, Lovely Professional University, Phagwara, Punjab, India
| | - Jaswinder Singh
- Department of Zoology, Khalsa College Amritsar, Punjab, India.
| | - Joginder Singh
- Department of Microbiology, School of Bioengineering and Biosciences, Lovely Professional University, Phagwara, Punjab, India
| | - Deachen Angmo
- Department of Botanical and Environmental Sciences, Guru Nanak Dev University, Amritsar, Punjab, India
| | - Adarsh Pal Vig
- Department of Botanical and Environmental Sciences, Guru Nanak Dev University, Amritsar, Punjab, India
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22
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Viel T, Manfra L, Zupo V, Libralato G, Cocca M, Costantini M. Biodegradation of Plastics Induced by Marine Organisms: Future Perspectives for Bioremediation Approaches. Polymers (Basel) 2023; 15:2673. [PMID: 37376319 DOI: 10.3390/polym15122673] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/09/2023] [Revised: 05/29/2023] [Accepted: 06/12/2023] [Indexed: 06/29/2023] Open
Abstract
Plastic pollution is a distinctive element of the globalized world. In fact, since the 1970s the expansion and use of plastics, particularly in the consumer and commercial sectors, has given this material a permanent place in our lives. The increasing use of plastic products and the wrong management of end-of-life plastic products have contributed to increasing environmental pollution, with negative impacts on our ecosystems and the ecological functions of natural habitats. Nowadays, plastic pollution is pervasive in all environmental compartments. As aquatic environments are the dumping points for poorly managed plastics, biofouling and biodegradation have been proposed as promising approaches for plastic bioremediation. Known for the high stability of plastics in the marine environment, this represents a very important issue to preserve marine biodiversity. In this review, we have summarized the main cases reported in the literature on the degradation of plastics by bacteria, fungi, and microalgae and the degradation mechanisms involved, to highlight the potential of bioremediation approaches to reduce macro and microplastic pollution.
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Affiliation(s)
- Thomas Viel
- Department of Ecosustainable Marine Biotechnology, Stazione Zoologica Anton Dohrn, Villa Comunale, 80121 Napoli, Italy
- Institute for Polymers, Composites and Biomaterials, National Research Council of Italy, Via Campi Flegri, 34, 80078 Pozzuoli, Italy
- Department of Biology, University of Naples Federico II, Via Cinthia 26, 80126 Napoli, Italy
| | - Loredana Manfra
- Department of Ecosustainable Marine Biotechnology, Stazione Zoologica Anton Dohrn, Villa Comunale, 80121 Napoli, Italy
- Institute for Environmental Protection and Research (ISPRA), Via Vitaliano Brancati 48, 00144 Rome, Italy
| | - Valerio Zupo
- Stazione Zoologica, Ecosustainable Biotechnology Department, Ischia Marine Centre, Via Buonocore 42, 80077 Ischia, Italy
| | - Giovanni Libralato
- Department of Ecosustainable Marine Biotechnology, Stazione Zoologica Anton Dohrn, Villa Comunale, 80121 Napoli, Italy
- Department of Biology, University of Naples Federico II, Via Cinthia 26, 80126 Napoli, Italy
| | - Mariacristina Cocca
- Institute for Polymers, Composites and Biomaterials, National Research Council of Italy, Via Campi Flegri, 34, 80078 Pozzuoli, Italy
| | - Maria Costantini
- Department of Ecosustainable Marine Biotechnology, Stazione Zoologica Anton Dohrn, Villa Comunale, 80121 Napoli, Italy
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23
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Chigwada AD, Ogola HJO, Tekere M. Multivariate analysis of enriched landfill soil consortia provide insight on the community structural perturbation and functioning during low-density polyethylene degradation. Microbiol Res 2023; 274:127425. [PMID: 37348445 DOI: 10.1016/j.micres.2023.127425] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/03/2023] [Revised: 05/23/2023] [Accepted: 06/05/2023] [Indexed: 06/24/2023]
Abstract
Plastic-enriched sites like landfills have immense potential for discovery of microbial consortia that can efficiently degrade plastics. In this study, we used a combination of culture enrichment, high-throughput PacBio sequencing of 16 S rRNA and the ITS gene, Fourier transform infrared (FTIR), and scanning electron microscopy (SEM) to examine the compositional and diversity perturbations of bacterial and fungal consortia from landfill soils and their impact on low-density polyethylene (LDPE) film biodegradation over a 90-day period. Results showed that enrichment cultures effectively utilized LDPE as a carbon source for cellular growth, resulting in significant weight reduction (22.4% and 55.6%) in the films. SEM analysis revealed marked changes in the micrometric surface characteristics (cracks, fissures, and erosion) and biofilm formation in LDPE films. FTIR analyses suggested structural and functional group modification related to C-H (2831-2943 cm⁻¹), and CH₂ (1400 cm⁻¹) stretching, CO and CC (680-950 cm⁻¹) scission, and CO incorporation (3320-3500 cm⁻¹) into the carbon backbone, indicative of LDPE polymer biodegradation. Enrichment cultures had lower diversity and richness of microbial taxa compared to soil samples, with LDPE as a carbon source having a direct influence on the structure and functioning of the microbial consortia. A total of 26 bacterial and 12 fungal OTU exhibiting high relative abundance and significant associations (IndVal > 0.7, q < 0.05) were identified in the enrichment culture. Bacterial taxa such as unclassified Parvibaculum FJ375498, Achromobacter xylosoxidans, unclassified Chitinophagaceae PAC002331, unclassified Paludisphaera and unclassified Comamonas JX898122, and six fungal species (Galactomyces candidus, Trichosporon chiropterorum, Aspergillus fumigatus, Penicillium chalabudae, Talaromyces thailandensis, and Penicillium citreosulfuratum) were identified as the putative LDPE degraders in the enrichment microbial consortium cultures. PICRUSt2 metagenomic functional profiling of taxonomic bacterial taxa abundances in both landfill soil and enrichment microbial consortia also revealed differential enrichment of energy production, stress tolerance, surface attachment and motility pathways, and xenobiotic degrading enzymes important for biofilm formation and hydrolytic/oxidative LDPE biodegradation. The findings shed light on the composition and structural changes in landfill soil microbial consortia during enrichment with LDPE as a carbon source and suggest novel LDPE-degrading bacterial and fungal taxa that could be explored for management of polyethylene pollution.
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Affiliation(s)
- Aubrey Dickson Chigwada
- Department of Environmental Sciences, College of Agriculture and Environmental Sciences, University of South Africa (UNISA), Florida Campus, Roodepoort 1709, South Africa
| | - Henry Joseph Oduor Ogola
- Department of Environmental Sciences, College of Agriculture and Environmental Sciences, University of South Africa (UNISA), Florida Campus, Roodepoort 1709, South Africa
| | - Memory Tekere
- Department of Environmental Sciences, College of Agriculture and Environmental Sciences, University of South Africa (UNISA), Florida Campus, Roodepoort 1709, South Africa.
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24
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Gong Z, Jin L, Yu X, Wang B, Hu S, Ruan H, Sung YJ, Lee HG, Jin F. Biodegradation of Low Density Polyethylene by the Fungus Cladosporium sp. Recovered from a Landfill Site. J Fungi (Basel) 2023; 9:605. [PMID: 37367541 DOI: 10.3390/jof9060605] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/23/2023] [Revised: 05/15/2023] [Accepted: 05/22/2023] [Indexed: 06/28/2023] Open
Abstract
Low density polyethylene (LDPE) has been widely used commercially for decades; however, as a non-degradable material, its continuous accumulation has contributed to serious environmental issues. A fungal strain, Cladosporium sp. CPEF-6 exhibiting a significant growth advantage on MSM-LDPE (minimal salt medium), was isolated and selected for biodegradation analysis. LDPE biodegradation was analyzed by weight loss percent, change in pH during fungal growth, environmental scanning electron microscopy (ESEM), and Fourier transformed infrared spectroscopy (FTIR). Inoculation with the strain Cladosporium sp. CPEF-6 resulted in a 0.30 ± 0.06% decrease in the weight of untreated LDPE (U-LDPE). After heat treatment (T-LDPE), the weight loss of LDPE increased significantly and reached 0.43 ± 0.01% after 30 days of culture. The pH of the medium was measured during LDPE degradation to assess the environmental changes caused by enzymes and organic acids secreted by the fungus. The fungal degradation of LDPE sheets was characterized by ESEM analysis of topographical alterations, such as cracks, pits, voids, and roughness. FTIR analysis of U-LDPE and T-LDPE revealed the appearance of novel functional groups associated with hydrocarbon biodegradation as well as changes in the polymer carbon chain, confirming the depolymerization of LDPE. This is the first report demonstrating the capacity of Cladosporium sp. to degrade LDPE, with the expectation that this finding can be used to ameliorate the negative impact of plastics on the environment.
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Affiliation(s)
- Zhu Gong
- Co-Innovation Center for Sustainable Forestry in Southern China, College of Biology and the Environment, Nanjing Forestry University, 159 Longpan Road, Nanjing 210037, China
| | - Long Jin
- Co-Innovation Center for Sustainable Forestry in Southern China, College of Biology and the Environment, Nanjing Forestry University, 159 Longpan Road, Nanjing 210037, China
| | - Xingye Yu
- Co-Innovation Center for Sustainable Forestry in Southern China, College of Biology and the Environment, Nanjing Forestry University, 159 Longpan Road, Nanjing 210037, China
| | - Baoteng Wang
- Co-Innovation Center for Sustainable Forestry in Southern China, College of Biology and the Environment, Nanjing Forestry University, 159 Longpan Road, Nanjing 210037, China
| | - Shuang Hu
- Co-Innovation Center for Sustainable Forestry in Southern China, College of Biology and the Environment, Nanjing Forestry University, 159 Longpan Road, Nanjing 210037, China
| | - Honghua Ruan
- Co-Innovation Center for Sustainable Forestry in Southern China, College of Biology and the Environment, Nanjing Forestry University, 159 Longpan Road, Nanjing 210037, China
| | - Yun-Ju Sung
- Technology Transfer Centre, Korea Research Institute of Bioscience & Biotechnology (KRIBB), Daejeon 34141, Republic of Korea
| | - Hyung-Gwan Lee
- Cell Factory Research Centre, Korea Research Institute of Bioscience & Biotechnology (KRIBB), Daejeon 34141, Republic of Korea
| | - Fengjie Jin
- Co-Innovation Center for Sustainable Forestry in Southern China, College of Biology and the Environment, Nanjing Forestry University, 159 Longpan Road, Nanjing 210037, China
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25
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Taxeidis G, Nikolaivits E, Siaperas R, Gkountela C, Vouyiouka S, Pantelic B, Nikodinovic-Runic J, Topakas E. Triggering and identifying the polyurethane and polyethylene-degrading machinery of filamentous fungi secretomes. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2023; 325:121460. [PMID: 36940913 DOI: 10.1016/j.envpol.2023.121460] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/06/2023] [Revised: 03/16/2023] [Accepted: 03/17/2023] [Indexed: 06/18/2023]
Abstract
The uncontrollable disposal of plastic waste has raised the concern of the scientific community, which tries to face this environmental burden by discovering and applying new techniques. Regarding the biotechnology field, several important microorganisms possessing the necessary enzymatic arsenal to utilize recalcitrant synthetic polymers as an energy source have been discovered. In the present study, we screened various fungi for their ability to degrade intact polymers, such as ether-based polyurethane (PU) and low-density polyethylene (LDPE). For this, ImpranIil® DLN-SD and a mixture of long-chain alkanes were used as sole carbon sources, indicating not only the most promising strains in agar plate screening but also inducing the secretion of depolymerizing enzymatic activities, useful for polymer degradation. The agar plate screening revealed three fungal strains belonging to Fusarium and Aspergillus genera, whose secretome was further studied for its ability to degrade the aforementioned non-treated polymers. Specifically for ether-based PU, the secretome of a Fusarium species reduced the sample mass and the average molecular weight of the polymer by 24.5 and 20.4%, respectively, while the secretome of an Aspergillus species caused changes in the molecular structure of LDPE, as evidenced by FTIR. The proteomics analysis revealed that the enzymatic activities induced in presence of Impranil® DLN-SD can be associated with urethane bond cleavage, a fact which was also supported by the observed degradation of the ether-based PU. Although, the mechanism of LDPE degradation was not completely elucidated, the presence of oxidative enzymes could be the main factor contributing to polymer modification.
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Affiliation(s)
- George Taxeidis
- Industrial Biotechnology & Biocatalysis Group, Biotechnology Laboratory, School of Chemical Engineering, National Technical University of Athens, Athens, Greece
| | - Efstratios Nikolaivits
- Industrial Biotechnology & Biocatalysis Group, Biotechnology Laboratory, School of Chemical Engineering, National Technical University of Athens, Athens, Greece
| | - Romanos Siaperas
- Industrial Biotechnology & Biocatalysis Group, Biotechnology Laboratory, School of Chemical Engineering, National Technical University of Athens, Athens, Greece
| | - Christina Gkountela
- Laboratory of Polymer Technology, School of Chemical Engineering, National Technical University of Athens, Athens, Greece
| | - Stamatina Vouyiouka
- Laboratory of Polymer Technology, School of Chemical Engineering, National Technical University of Athens, Athens, Greece
| | - Brana Pantelic
- Eco-Biotechnology & Drug Development Group, Laboratory for Microbial Molecular Genetics and Ecology, Institute of Molecular Genetics and Genetic Engineering, University of Belgrade, 11000, Belgrade, Serbia
| | - Jasmina Nikodinovic-Runic
- Eco-Biotechnology & Drug Development Group, Laboratory for Microbial Molecular Genetics and Ecology, Institute of Molecular Genetics and Genetic Engineering, University of Belgrade, 11000, Belgrade, Serbia
| | - Evangelos Topakas
- Industrial Biotechnology & Biocatalysis Group, Biotechnology Laboratory, School of Chemical Engineering, National Technical University of Athens, Athens, Greece.
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26
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Zhang C, Mu Y, Li T, Jin FJ, Jin CZ, Oh HM, Lee HG, Jin L. Assembly strategies for polyethylene-degrading microbial consortia based on the combination of omics tools and the "Plastisphere". Front Microbiol 2023; 14:1181967. [PMID: 37138608 PMCID: PMC10150012 DOI: 10.3389/fmicb.2023.1181967] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/08/2023] [Accepted: 03/31/2023] [Indexed: 05/05/2023] Open
Abstract
Numerous microorganisms and other invertebrates that are able to degrade polyethylene (PE) have been reported. However, studies on PE biodegradation are still limited due to its extreme stability and the lack of explicit insights into the mechanisms and efficient enzymes involved in its metabolism by microorganisms. In this review, current studies of PE biodegradation, including the fundamental stages, important microorganisms and enzymes, and functional microbial consortia, were examined. Considering the bottlenecks in the construction of PE-degrading consortia, a combination of top-down and bottom-up approaches is proposed to identify the mechanisms and metabolites of PE degradation, related enzymes, and efficient synthetic microbial consortia. In addition, the exploration of the plastisphere based on omics tools is proposed as a future principal research direction for the construction of synthetic microbial consortia for PE degradation. Combining chemical and biological upcycling processes for PE waste could be widely applied in various fields to promote a sustainable environment.
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Affiliation(s)
- Chengxiao Zhang
- College of Biology and the Environment, Co-Innovation Centre for Sustainable Forestry in Southern China, Nanjing Forestry University, Nanjing, China
| | - Yulin Mu
- College of Biology and the Environment, Co-Innovation Centre for Sustainable Forestry in Southern China, Nanjing Forestry University, Nanjing, China
| | - Taihua Li
- College of Biology and the Environment, Co-Innovation Centre for Sustainable Forestry in Southern China, Nanjing Forestry University, Nanjing, China
| | - Feng-Jie Jin
- College of Biology and the Environment, Co-Innovation Centre for Sustainable Forestry in Southern China, Nanjing Forestry University, Nanjing, China
| | - Chun-Zhi Jin
- Cell Factory Research Centre, Korea Research Institute of Bioscience & Biotechnology, Daejeon, Republic of Korea
| | - Hee-Mock Oh
- Cell Factory Research Centre, Korea Research Institute of Bioscience & Biotechnology, Daejeon, Republic of Korea
| | - Hyung-Gwan Lee
- Cell Factory Research Centre, Korea Research Institute of Bioscience & Biotechnology, Daejeon, Republic of Korea
- Hyung-Gwan Lee,
| | - Long Jin
- College of Biology and the Environment, Co-Innovation Centre for Sustainable Forestry in Southern China, Nanjing Forestry University, Nanjing, China
- *Correspondence: Long Jin,
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27
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Mapook A, Hyde KD, Hassan K, Kemkuignou BM, Čmoková A, Surup F, Kuhnert E, Paomephan P, Cheng T, de Hoog S, Song Y, Jayawardena RS, Al-Hatmi AMS, Mahmoudi T, Ponts N, Studt-Reinhold L, Richard-Forget F, Chethana KWT, Harishchandra DL, Mortimer PE, Li H, Lumyong S, Aiduang W, Kumla J, Suwannarach N, Bhunjun CS, Yu FM, Zhao Q, Schaefer D, Stadler M. Ten decadal advances in fungal biology leading towards human well-being. FUNGAL DIVERS 2022; 116:547-614. [PMID: 36123995 PMCID: PMC9476466 DOI: 10.1007/s13225-022-00510-3] [Citation(s) in RCA: 18] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/23/2022] [Accepted: 07/28/2022] [Indexed: 11/04/2022]
Abstract
Fungi are an understudied resource possessing huge potential for developing products that can greatly improve human well-being. In the current paper, we highlight some important discoveries and developments in applied mycology and interdisciplinary Life Science research. These examples concern recently introduced drugs for the treatment of infections and neurological diseases; application of -OMICS techniques and genetic tools in medical mycology and the regulation of mycotoxin production; as well as some highlights of mushroom cultivaton in Asia. Examples for new diagnostic tools in medical mycology and the exploitation of new candidates for therapeutic drugs, are also given. In addition, two entries illustrating the latest developments in the use of fungi for biodegradation and fungal biomaterial production are provided. Some other areas where there have been and/or will be significant developments are also included. It is our hope that this paper will help realise the importance of fungi as a potential industrial resource and see the next two decades bring forward many new fungal and fungus-derived products.
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Affiliation(s)
- Ausana Mapook
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100 Thailand
| | - Kevin D. Hyde
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100 Thailand
- School of Science, Mae Fah Luang University, Chiang Rai, 57100 Thailand
- Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201 Yunnan China
- Research Center of Microbial Diversity and Sustainable Utilization, Chiang Mai University, Chiang Mai, 50200 Thailand
- Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai, 50200 Thailand
- Innovative Institute of Plant Health, Zhongkai University of Agriculture and Engineering, Haizhu District, Guangzhou, 510225 China
| | - Khadija Hassan
- Department Microbial Drugs, Helmholtz Centre for Infection Research (HZI), and German Centre for Infection Research (DZIF), Partner Site Hannover-Braunschweig, Inhoffenstrasse 7, 38124 Brunswick, Germany
| | - Blondelle Matio Kemkuignou
- Department Microbial Drugs, Helmholtz Centre for Infection Research (HZI), and German Centre for Infection Research (DZIF), Partner Site Hannover-Braunschweig, Inhoffenstrasse 7, 38124 Brunswick, Germany
| | - Adéla Čmoková
- Laboratory of Fungal Genetics and Metabolism, Institute of Microbiology, Czech Academy of Sciences, Prague, Czech Republic
| | - Frank Surup
- Department Microbial Drugs, Helmholtz Centre for Infection Research (HZI), and German Centre for Infection Research (DZIF), Partner Site Hannover-Braunschweig, Inhoffenstrasse 7, 38124 Brunswick, Germany
- Institute of Microbiology, Technische Universität Braunschweig, Spielmannstraße 7, 38106 Brunswick, Germany
| | - Eric Kuhnert
- Centre of Biomolecular Drug Research (BMWZ), Institute for Organic Chemistry, Leibniz University Hannover, Schneiderberg 38, 30167 Hannover, Germany
| | - Pathompong Paomephan
- Department Microbial Drugs, Helmholtz Centre for Infection Research (HZI), and German Centre for Infection Research (DZIF), Partner Site Hannover-Braunschweig, Inhoffenstrasse 7, 38124 Brunswick, Germany
- Department of Biotechnology, Faculty of Science, Mahidol University, 272 Rama VI Road, Ratchathewi, Bangkok, 10400 Thailand
| | - Tian Cheng
- Department Microbial Drugs, Helmholtz Centre for Infection Research (HZI), and German Centre for Infection Research (DZIF), Partner Site Hannover-Braunschweig, Inhoffenstrasse 7, 38124 Brunswick, Germany
- Laboratory of Fungal Genetics and Metabolism, Institute of Microbiology, Czech Academy of Sciences, Prague, Czech Republic
| | - Sybren de Hoog
- Center of Expertise in Mycology, Radboud University Medical Center / Canisius Wilhelmina Hospital, Nijmegen, The Netherlands
- Key Laboratory of Environmental Pollution Monitoring and Disease Control, Guizhou Medical University, Guiyang, China
- Microbiology, Parasitology and Pathology Graduate Program, Federal University of Paraná, Curitiba, Brazil
| | - Yinggai Song
- Department of Dermatology, Peking University First Hospital, Peking University, Beijing, China
| | - Ruvishika S. Jayawardena
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100 Thailand
- School of Science, Mae Fah Luang University, Chiang Rai, 57100 Thailand
| | - Abdullah M. S. Al-Hatmi
- Center of Expertise in Mycology, Radboud University Medical Center / Canisius Wilhelmina Hospital, Nijmegen, The Netherlands
- Natural and Medical Sciences Research Center, University of Nizwa, Nizwa, Oman
| | - Tokameh Mahmoudi
- Department of Biochemistry, Erasmus University Medical Center, Rotterdam, The Netherlands
| | - Nadia Ponts
- INRAE, UR1264 Mycology and Food Safety (MycSA), 33882 Villenave d’Ornon, France
| | - Lena Studt-Reinhold
- Department of Applied Genetics and Cell Biology, Institute of Microbial Genetics, University of Natural Resources and Life Sciences, Vienna (BOKU), Tulln an der Donau, Austria
| | | | - K. W. Thilini Chethana
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100 Thailand
- School of Science, Mae Fah Luang University, Chiang Rai, 57100 Thailand
| | - Dulanjalee L. Harishchandra
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100 Thailand
- School of Science, Mae Fah Luang University, Chiang Rai, 57100 Thailand
- Beijing Key Laboratory of Environment Friendly Management on Fruit Diseases and Pests in North China, Institute of Plant Protection, Beijing Academy of Agriculture and Forestry Sciences, Beijing, 100097 China
| | - Peter E. Mortimer
- Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201 Yunnan China
- Centre for Mountain Futures (CMF), Kunming Institute of Botany, Chinese Academy of Science, Kunming, 650201 Yunnan China
| | - Huili Li
- Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201 Yunnan China
- Centre for Mountain Futures (CMF), Kunming Institute of Botany, Chinese Academy of Science, Kunming, 650201 Yunnan China
| | - Saisamorm Lumyong
- Research Center of Microbial Diversity and Sustainable Utilization, Chiang Mai University, Chiang Mai, 50200 Thailand
- Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai, 50200 Thailand
- Academy of Science, The Royal Society of Thailand, Bangkok, 10300 Thailand
| | - Worawoot Aiduang
- Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai, 50200 Thailand
| | - Jaturong Kumla
- Research Center of Microbial Diversity and Sustainable Utilization, Chiang Mai University, Chiang Mai, 50200 Thailand
- Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai, 50200 Thailand
| | - Nakarin Suwannarach
- Research Center of Microbial Diversity and Sustainable Utilization, Chiang Mai University, Chiang Mai, 50200 Thailand
- Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai, 50200 Thailand
| | - Chitrabhanu S. Bhunjun
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100 Thailand
- School of Science, Mae Fah Luang University, Chiang Rai, 57100 Thailand
| | - Feng-Ming Yu
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100 Thailand
- School of Science, Mae Fah Luang University, Chiang Rai, 57100 Thailand
- Yunnan Key Laboratory of Fungal Diversity and Green Development, Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201 Yunnan China
| | - Qi Zhao
- Yunnan Key Laboratory of Fungal Diversity and Green Development, Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201 Yunnan China
| | - Doug Schaefer
- Centre for Mountain Futures (CMF), Kunming Institute of Botany, Chinese Academy of Science, Kunming, 650201 Yunnan China
| | - Marc Stadler
- Department Microbial Drugs, Helmholtz Centre for Infection Research (HZI), and German Centre for Infection Research (DZIF), Partner Site Hannover-Braunschweig, Inhoffenstrasse 7, 38124 Brunswick, Germany
- Institute of Microbiology, Technische Universität Braunschweig, Spielmannstraße 7, 38106 Brunswick, Germany
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28
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Abiotic aging assisted bio-oxidation and degradation of LLDPE/LDPE packaging polyethylene film by stimulated enrichment culture. Polym Degrad Stab 2022. [DOI: 10.1016/j.polymdegradstab.2022.110156] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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29
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Abdel-Fattah Mostafa A, Yassin MT, Dawoud TM, Al-Otibi FO, Sayed SR. Mycodegradation of diazinon pesticide utilizing fungal strains isolated from polluted soil. ENVIRONMENTAL RESEARCH 2022; 212:113421. [PMID: 35568233 DOI: 10.1016/j.envres.2022.113421] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/11/2022] [Revised: 04/22/2022] [Accepted: 05/02/2022] [Indexed: 06/15/2023]
Abstract
The current study aimed to isolate biodegradable soil fungi capable of metabolizing diazinon. The collected soil samples were investigated for diazinon pollution to detect the pesticide level in the polluted soil samples. Food poisoning techniques were utilized to preliminary investigate the biodegradation efficiency of the isolated fungal strains to diazinon pesticide using solid and liquid medium and also to detect their tolerance to different concentrations. GC-MS analysis of control and treated flasks were achieved to determine the diazinon residues for confirmation of the biodegradation efficiency. The total diazinon residues in the collected soil samples was found to be 0.106 mg/kg. Out of thirteen fungal strains isolated form diazinon polluted soils, six strains were potentially active in diazinon biodegradation. Food poisoning technique showed that A. niger, B. antennata, F. graminearum, P. digitatum, R. stolonifer and T. viride strains recorded fungal growth diameters of 65.2 ± 0.18, 57.5 ± 0.41, 47.2 ± 0.36, 56.5 ± 0.27, 85.0 ± 0.01, 85.0 ± 0.06 mm respectively in the treated group which were non significantly different compared to that of control (P > 0.05), indicating the high efficiency of these strains in diazinon degradation compared to the other isolated strains. GC-MS analysis revealed that B. antennata was the most efficient strain in diazinon degradation recording 32.24 ± 0.15 ppm concentration after 10 days incubation. Linear regression analysis confirmed that B. antennata was the most effective biodegradable strain recording the highest diazinon dissipation (83.88%) with the lowest T1/2 value of 5.96 days while T. viride, A. niger, R. stolonifer and F. graminearum exhibited a high biodegradable activities reducing diazinon to 80.26%, 78.22%, 77.36% and 75.43% respectively after 10 days incubation. In conclusion, these tolerant fungi could be considered as promising, eco-friendly and biodegradable fungi for the efficient and potential removal of hazardous diazinon from polluted soil.
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Affiliation(s)
- Ashraf Abdel-Fattah Mostafa
- Botany and Microbiology Department, College of Science, King Saud University, P.O. 2455, Riyadh, 11451, Saudi Arabia
| | - Mohamed Taha Yassin
- Botany and Microbiology Department, College of Science, King Saud University, P.O. 2455, Riyadh, 11451, Saudi Arabia.
| | - Turki M Dawoud
- Botany and Microbiology Department, College of Science, King Saud University, P.O. 2455, Riyadh, 11451, Saudi Arabia
| | - Fatimah O Al-Otibi
- Botany and Microbiology Department, College of Science, King Saud University, P.O. 2455, Riyadh, 11451, Saudi Arabia
| | - Shaban Rm Sayed
- Electron Microscope Unit, Collage of Science, King Saud University, Riyadh, 11451, Saudi Arabia
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A Review of the Fungi That Degrade Plastic. J Fungi (Basel) 2022; 8:jof8080772. [PMID: 35893140 PMCID: PMC9330918 DOI: 10.3390/jof8080772] [Citation(s) in RCA: 22] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2022] [Revised: 07/11/2022] [Accepted: 07/20/2022] [Indexed: 11/25/2022] Open
Abstract
Plastic has become established over the world as an essential basic need for our daily life. Current global plastic production exceeds 300 million tons annually. Plastics have many characteristics such as low production costs, inertness, relatively low weight, and durability. The primary disadvantage of plastics is their extremely slow natural degradation. The latter results in an accumulation of plastic waste in nature. The amount of plastic waste as of 2015 was 6300 million tons worldwide, and 79% of this was placed in landfills or left in the natural environment. Moreover, recent estimates report that 12,000 million tons of plastic waste will have been accumulated on the earth by 2050. Therefore, it is necessary to develop an effective plastic biodegradation process to accelerate the natural degradation rate of plastics. More than 400 microbes have been identified as capable of plastic degradation. This is the first paper of the series on plastic-degrading fungi. This paper provides a summary of the current global production of plastic and plastic waste accumulation in nature. A list is given of all the plastic-degrading fungi recorded thus far, based on the available literature, and comments are made relating to the major fungal groups. In addition, the phylogenetic relationships of plastic-degrading fungi were analyzed using a combined ITS, LSU, SSU, TEF, RPB1, and RPB2 dataset consisting of 395 strains. Our results confirm that plastic-degrading fungi are found in eleven classes in the fungal phyla Ascomycota (Dothideomycetes, Eurotiomycetes, Leotiomycetes, Saccharomycetes, and Sordariomycetes), Basidiomycota (Agaricomycetes, Microbotryomycetes, Tremellomycetes, Tritirachiomycetes, and Ustilaginomy-cetes), and Mucoromycota (Mucoromycetes). The taxonomic placement of plastic-degrading fungal taxa is briefly discussed. The Eurotiomycetes include the largest number of plastic degraders in the kingdom Fungi. The results presented herein are expected to influence the direction of future research on similar topics in order to find effective plastic-degrading fungi that can eliminate plastic wastes. The next publication of the series on plastic-degrading fungi will be focused on major metabolites, degradation pathways, and enzyme production in plastic degradation by fungi.
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Biofilm Structural and Functional Features on Microplastic Surfaces in Greenhouse Agricultural Soil. SUSTAINABILITY 2022. [DOI: 10.3390/su14127024] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
Microplastics (MPs) enter the soil through a variety of pathways, including plastic mulching, sludge, and organic manure application. In recent years, domestic and foreign experts and scholars have been concerned about the residues and contamination of MPs in the soil of greenhouse agriculture. In this investigation, five types of MPs including low-density polyethylene (LDPE), high-density polyethylene (HDPE), polystyrene (PS), polypropylene (PP), and polyethylene terephthalate (PET), and two concentrations (1% and 5%, w/w) were used in a 30-day external exposure test. Evidence of microbial enrichment was found on the surface of the MPs. The total amount of biofilm on the surface of MPs increased dramatically with increasing exposure time and MP concentrations. The polysaccharide content of extracellular polymers (EPS) in biofilms was significantly different, and the maximum PS1 (1% (w/w) PS) concentration was 50.17 mg/L. However, EPS protein content did not change significantly. The dominant bacteria on the surface of MPs with different types and concentrations were specific, and the relative abundance of Patescibacteria was significantly changed at the phylum level. At the genus level, Methylophaga, Saccharimonadales, and Sphingomonas dominated the flora of LDPE1 (1% (w/w) LDPE), PS1, and PET5 (5% (w/w) PET). The dominant bacteria decompose organic materials and biodegrade organic contaminants. According to the FAPROTAX functional prediction study, chemoheterotrophy and aerobic chemoheterotrophyplay a role in ecosystem processes such as carbon cycle and climate regulation. The application of LDPE1 has a greater impact on the carbon cycle. Plant development and soil nutrients in greenhouse agriculture may be influenced by the interaction between MPs and microorganisms in the growing area, while MP biofilms have an impact on the surrounding environment and pose an ecological hazard.
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Gao R, Liu R, Sun C. A marine fungus Alternaria alternata FB1 efficiently degrades polyethylene. JOURNAL OF HAZARDOUS MATERIALS 2022; 431:128617. [PMID: 35359103 DOI: 10.1016/j.jhazmat.2022.128617] [Citation(s) in RCA: 43] [Impact Index Per Article: 21.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/29/2021] [Revised: 01/21/2022] [Accepted: 02/28/2022] [Indexed: 06/14/2023]
Abstract
Huge quantities of plastic wastes have been accumulating in the environment causing serious ecological problems and significantly impacting the global carbon cycling. Plastic pollutions have been recognized as the most common and durable marine contaminants. Consequently, the marine environment is becoming a hot spot to screen microorganisms possessing potential plastic degradation capabilities. Here, by screening hundreds of plastic waste-associated samples, we isolated a fungus (named Alternaria alternata FB1) that possessing a prominent capability of colonizing on the polyethylene (PE) film. Through Scanning Electron Microscope (SEM) observation, we found this fungus could efficiently degrade the PE film and formed numerous obvious holes in the plastic surface. Moreover, the Fourier Transform Infrared (FTIR) imaging detected absorption peak in the vicinity of 1715 cm-1, indicating the formation of carbonyl bonds (-CO-). Through X-Ray Diffraction (XRD) analysis, we found that the PE film treated by strain FB1 for 28 days showed an evident reduced relative crystallinity degree, resulting in a decrease from 62.79% to 52.02%. Strikingly, the molecular weight of PE film decreased 95% after 120 days treatment by strain FB1. Using GC-MS, we further clarified that a four-carbon product (named Diglycolamine) accounted for 93.28% of all degradation products. We defined 153 enzymes that potentially involved in the degradation of PE through a transcriptomic method. The degradation capabilities of two representative enzymes including a laccase (with a molecular weight about 59.49 kDa) and a peroxidase (with a molecular weight about 36.7 kDa) were verified. Lastly, a complete biodegradation process of PE was proposed. Given the extreme paucity of microorganisms and enzymes for effective degradation of PE in the present time, our study provides a compelling candidate for further investigation of degradation mechanisms and development of biodegradation products of PE.
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Affiliation(s)
- Rongrong Gao
- CAS and Shandong Province Key Laboratory of Experimental Marine Biology & Center of Deep Sea Research, Institute of Oceanology, Chinese Academy of Sciences, Qingdao, China; Laboratory for Marine Biology and Biotechnology, Pilot National Laboratory for Marine Science and Technology, Qingdao, China; College of Earth Science, University of Chinese Academy of Sciences, Beijing, China; Center of Ocean Mega-Science, Chinese Academy of Sciences, Qingdao, China
| | - Rui Liu
- CAS and Shandong Province Key Laboratory of Experimental Marine Biology & Center of Deep Sea Research, Institute of Oceanology, Chinese Academy of Sciences, Qingdao, China; Laboratory for Marine Biology and Biotechnology, Pilot National Laboratory for Marine Science and Technology, Qingdao, China; Center of Ocean Mega-Science, Chinese Academy of Sciences, Qingdao, China
| | - Chaomin Sun
- CAS and Shandong Province Key Laboratory of Experimental Marine Biology & Center of Deep Sea Research, Institute of Oceanology, Chinese Academy of Sciences, Qingdao, China; Laboratory for Marine Biology and Biotechnology, Pilot National Laboratory for Marine Science and Technology, Qingdao, China; College of Earth Science, University of Chinese Academy of Sciences, Beijing, China; Center of Ocean Mega-Science, Chinese Academy of Sciences, Qingdao, China.
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Delangiz N, Aliyar S, Pashapoor N, Nobaharan K, Asgari Lajayer B, Rodríguez-Couto S. Can polymer-degrading microorganisms solve the bottleneck of plastics' environmental challenges? CHEMOSPHERE 2022; 294:133709. [PMID: 35074325 DOI: 10.1016/j.chemosphere.2022.133709] [Citation(s) in RCA: 18] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/16/2021] [Revised: 11/27/2021] [Accepted: 01/18/2022] [Indexed: 06/14/2023]
Abstract
Increasing world population and industrial activities have enhanced anthropogenic pollution, plastic pollution being especially alarming. So, plastics should be recycled and/or make them biodegradable. Chemical and physical remediating methods are usually energy consuming and costly. In addition, they are not ecofriendly and usually produce toxic byproducts. Bioremediation is a proper option as it is cost-efficient and environmentally friendly. Plastic production and consumption are increasing daily, and, as a consequence, more microorganisms are exposed to these nonbiodegradable polymers. Therefore, investigating new efficient microorganisms and increasing the knowledge about their biology can pave the way for efficient and feasible plastic bioremediation processes. In this sense, omics, systems biology and bioinformatics are three important fields to analyze the biodegradation pathways in microorganisms. Based on the above-mentioned technologies, researchers can engineer microorganisms with specific desired properties to make bioremediation more efficient.
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Affiliation(s)
- Nasser Delangiz
- Department of Plant Biotechnology and Breeding, Faculty of Agriculture, University of Tabriz, Tabriz, Iran.
| | - Sajad Aliyar
- Department of Soil Science, Faculty of Agriculture, University of Tabriz, Tabriz, Iran
| | - Neda Pashapoor
- Department of Soil Science, Faculty of Agriculture, Urmia University, Urmia, Iran
| | | | - Behnam Asgari Lajayer
- Department of Soil Science, Faculty of Agriculture, University of Tabriz, Tabriz, Iran.
| | - Susana Rodríguez-Couto
- Department of Separation Science, LUT School of Engineering Science, LUT University, Sammonkatu 12, FI-50130 Mikkeli, Finland
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Eldin AM, Al-Sharnouby SFS, ElGabry KIM, Ramadan AI. Aspergillus terreus, Penicillium sp. and Bacillus sp. isolated from mangrove soil having laccase and peroxidase role in depolymerization of polyethylene bags. Process Biochem 2022. [DOI: 10.1016/j.procbio.2022.04.030] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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35
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Zhurina MV, Bogdanov KI, Gannesen AV, Mart’yanov SV, Plakunov VK. Microplastics as a New Ecological Niche For Multispecies Microbial Biofilms within the Plastisphere. Microbiology (Reading) 2022. [DOI: 10.1134/s0026261722020126] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022] Open
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36
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Tyagi P, Agate S, Velev OD, Lucia L, Pal L. A Critical Review of the Performance and Soil Biodegradability Profiles of Biobased Natural and Chemically Synthesized Polymers in Industrial Applications. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2022; 56:2071-2095. [PMID: 35077140 DOI: 10.1021/acs.est.1c04710] [Citation(s) in RCA: 15] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
Abstract
This review explores biobased polymers for industrial applications, their end fate, and most importantly, origin and key aspects enabling soil biodegradation. The physicochemical properties of biobased synthetic and natural polymers and the primary factors governing degradation are explored. Current and future biobased systems and factors allowing for equivalent comparisons of degradation and possible sources for engineering improved biodegradation are reviewed. Factors impacting ultraviolet (UV) stability of biopolymers have been described including methods to enhance photoresistance and impact on biodegradation. It discusses end-fate of biopolymers in soil and impact of residues on soil health. A limited number of studies examine side effects (e.g., microbial toxicity) from soil biodegradation of composites and biopolymers. Currently available standards for biodegradation and composting have been described with limitations and scope for improvements. Finally, design considerations and implications for sustainable polymers used, under consideration, and to be considered within the context of a rational biodegradable strategy are elaborated.
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Affiliation(s)
- Preeti Tyagi
- Department of Forest Biomaterials, North Carolina State University, 431 Dan Allen Dr., Raleigh, North Carolina 27695, United States
- Global Breakthrough Packaging Group, Mars Wrigley, Chicago, Illinois 60642, United States
| | - Sachin Agate
- Department of Forest Biomaterials, North Carolina State University, 431 Dan Allen Dr., Raleigh, North Carolina 27695, United States
| | - Orlin D Velev
- Department of Chemical and Biomolecular Engineering, North Carolina State University, 911 Partners Way, Raleigh, North Carolina 27695, United States
| | - Lucian Lucia
- Department of Forest Biomaterials, North Carolina State University, 431 Dan Allen Dr., Raleigh, North Carolina 27695, United States
| | - Lokendra Pal
- Department of Forest Biomaterials, North Carolina State University, 431 Dan Allen Dr., Raleigh, North Carolina 27695, United States
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Ebrahimbabaie P, Yousefi K, Pichtel J. Photocatalytic and biological technologies for elimination of microplastics in water: Current status. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 806:150603. [PMID: 34592303 DOI: 10.1016/j.scitotenv.2021.150603] [Citation(s) in RCA: 25] [Impact Index Per Article: 12.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/25/2021] [Revised: 09/20/2021] [Accepted: 09/22/2021] [Indexed: 06/13/2023]
Abstract
Water pollution by microplastics (MPs) has emerged as a significant environmental and public health concern. Several conventional technologies in drinking water and wastewater treatment facilities are capable of capturing a substantial portion of microplastics from surface water; however, only limited methods are available for actual destruction of microplastics. Rate of success is highly variable, and actual mechanisms which result in MP destruction are only partly known. Photocatalysis and microbial degradation technologies show promise at laboratory scale for the transformation of microplastics to water-soluble hydrocarbons, carbon dioxide and, in limited cases, useful fuels. Both photocatalytic and microbial technologies offer the potential for long-term water security and ecological stability and deserve further attention by scientists. Additional research is necessary, however, in identifying more effective semiconductors for photocatalysis, and optimal effective microbial consortia and environmental conditions to optimize microplastic biodegradation. Many more polymer types beyond polyethylene must be studied for degradation, and laboratory-scale research must be expanded to field-scale. This paper provides a comprehensive overview of processes and mechanisms for removing MPs by photocatalysis and microbial technologies. It provides useful data for research dedicated to improved removal of MPs from surface waters.
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Affiliation(s)
- Parisa Ebrahimbabaie
- Environment, Geology and Natural Resources, Ball State University, Muncie, IN 47306, USA.
| | - Kimiya Yousefi
- Department of Chemical Engineering, Faculty of Engineering, Shahid Bahonar University, Kerman, Iran.
| | - John Pichtel
- Environment, Geology and Natural Resources, Ball State University, Muncie, IN 47306, USA.
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Kumari A, Rajput VD, Mandzhieva SS, Rajput S, Minkina T, Kaur R, Sushkova S, Kumari P, Ranjan A, Kalinitchenko VP, Glinushkin AP. Microplastic Pollution: An Emerging Threat to Terrestrial Plants and Insights into Its Remediation Strategies. PLANTS (BASEL, SWITZERLAND) 2022; 11:340. [PMID: 35161320 PMCID: PMC8837937 DOI: 10.3390/plants11030340] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/24/2021] [Revised: 01/13/2022] [Accepted: 01/19/2022] [Indexed: 05/06/2023]
Abstract
Microplastics (MPs) are ubiquitous and constitute a global hazard to the environment because of their robustness, resilience, and long-term presence in the ecosystem. For now, the majority of research has primarily focused on marine and freshwater ecosystems, with just a small amount of attention towards the terrestrial ecosystems. Although terrestrial ecosystems are recognized as the origins and routes for MPs to reach the sea, there is a paucity of knowledge about these ecological compartments, which is necessary for conducting effective ecological risk assessments. Moreover, because of their high persistence and widespread usage in agriculture, agribusiness, and allied sectors, the presence of MPs in arable soils is undoubtedly an undeniable and severe concern. Consequently, in the recent decade, the potential risk of MPs in food production, as well as their impact on plant growth and development, has received a great deal of interest. Thus, a thorough understanding of the fate and risks MPs, as well as prospective removal procedures for safe and viable agricultural operations in real-world circumstances, are urgently needed. Therefore, the current review is proposed to highlight the potential sources and interactions of MPs with agroecosystems and plants, along with their remediation strategies.
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Affiliation(s)
- Arpna Kumari
- Academy of Biology and Biotechnology, Southern Federal University, 344006 Rostov-on-Don, Russia; (S.S.M.); (T.M.); (S.S.); (A.R.)
| | - Vishnu D. Rajput
- Academy of Biology and Biotechnology, Southern Federal University, 344006 Rostov-on-Don, Russia; (S.S.M.); (T.M.); (S.S.); (A.R.)
| | - Saglara S. Mandzhieva
- Academy of Biology and Biotechnology, Southern Federal University, 344006 Rostov-on-Don, Russia; (S.S.M.); (T.M.); (S.S.); (A.R.)
| | - Sneh Rajput
- Department of Botanical and Environmental Sciences, Guru Nanak Dev University, Amritsar 143005, India; (S.R.); (R.K.)
| | - Tatiana Minkina
- Academy of Biology and Biotechnology, Southern Federal University, 344006 Rostov-on-Don, Russia; (S.S.M.); (T.M.); (S.S.); (A.R.)
| | - Rajanbir Kaur
- Department of Botanical and Environmental Sciences, Guru Nanak Dev University, Amritsar 143005, India; (S.R.); (R.K.)
| | - Svetlana Sushkova
- Academy of Biology and Biotechnology, Southern Federal University, 344006 Rostov-on-Don, Russia; (S.S.M.); (T.M.); (S.S.); (A.R.)
| | - Poonam Kumari
- Department of Biosciences, Himachal Pradesh University, Shimla 171005, India;
| | - Anuj Ranjan
- Academy of Biology and Biotechnology, Southern Federal University, 344006 Rostov-on-Don, Russia; (S.S.M.); (T.M.); (S.S.); (A.R.)
| | - Valery P. Kalinitchenko
- All-Russia Research Institute for Phytopathology RAS, 5 Institute St., Big Vyazyomy, 143050 Moscow, Russia; (V.P.K.); (A.P.G.)
- Institute of Fertility of Soils of South Russia, Krivoshlykova St., Persianovka, 346493 Moscow, Russia
| | - Alexey P. Glinushkin
- All-Russia Research Institute for Phytopathology RAS, 5 Institute St., Big Vyazyomy, 143050 Moscow, Russia; (V.P.K.); (A.P.G.)
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39
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Chattopadhyay I. Role of microbiome and biofilm in environmental plastic degradation. BIOCATALYSIS AND AGRICULTURAL BIOTECHNOLOGY 2022. [DOI: 10.1016/j.bcab.2021.102263] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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40
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Meera SP, Bhattacharyya M, Nizam A, Kumar A. A review on microplastic pollution in the mangrove wetlands and microbial strategies for its remediation. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2022; 29:4865-4879. [PMID: 34791631 DOI: 10.1007/s11356-021-17451-0] [Citation(s) in RCA: 15] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/14/2021] [Accepted: 11/05/2021] [Indexed: 06/13/2023]
Abstract
Mangroves are one of the most productive ecosystems in the world harboring huge biological diversity. The prime ecological roles of mangroves are prevention of coastal erosion and shoreline protection. Mangroves face varying degrees of threats due to overexploitation, conversion of mangrove habitats for agriculture, settlement and industrial purposes, illegal encroachment, global warming, sea-level rise, El Nino, and pollution. Among them, microplastic (MP) pollution is a major concern threatening not only the mangroves per se but also the rich biodiversity that it shelters. In general, the microbial communities which are paramount to nutrient recycling and ecological dynamics undergo substantial changes upon MP exposure. If the MP pollution in the mangrove habitats continues unabated in the coming decades, there may be serious consequences on the already threatened mangrove ecosystems and the coastal communities. This review article attempts to consolidate MP pollution of mangrove wetlands, its impact on mangroves and associated microbiota, and the microbial solution for its remediation as a sustainable strategy.
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Affiliation(s)
- Suraj Prasannakumari Meera
- Department of Biotechnology and Microbiology, Dr. Janaki Ammal Campus, Kannur University, Palayad, 670661, Kerala, India
| | - Malini Bhattacharyya
- Department of Plant Science, Central University of Kerala, Kasaragod, 671316, Kerala, India
| | - Ashifa Nizam
- Department of Plant Science, Central University of Kerala, Kasaragod, 671316, Kerala, India
| | - Ajay Kumar
- Department of Plant Science, Central University of Kerala, Kasaragod, 671316, Kerala, India.
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Weig AR, Löder MGJ, Ramsperger AFRM, Laforsch C. In situ Prokaryotic and Eukaryotic Communities on Microplastic Particles in a Small Headwater Stream in Germany. Front Microbiol 2021; 12:660024. [PMID: 34912303 PMCID: PMC8667586 DOI: 10.3389/fmicb.2021.660024] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/28/2021] [Accepted: 11/04/2021] [Indexed: 01/04/2023] Open
Abstract
The ubiquitous use of plastic products in our daily life is often accompanied by improper disposal. The first interactions of plastics with organisms in the environment occur by overgrowth or biofilm formation on the particle surface, which can facilitate the ingestion by animals. In order to elucidate the colonization of plastic particles by prokaryotic and eukaryotic microorganisms in situ, we investigated microbial communities in biofilms on four different polymer types and on mineral particles in a small headwater stream 500 m downstream of a wastewater treatment plant in Germany. Microplastic and mineral particles were exposed to the free-flowing water for 4 weeks in spring and in summer. The microbial composition of the developing biofilm was analyzed by 16S and 18S amplicon sequencing. Despite the expected seasonal differences in the microbial composition of pro- and eukaryotic communities, we repeatedly observed polymer type-specific differentiation in both seasons. The order of polymer type-specific prokaryotic and eukaryotic community distances calculated by Robust Aitchison principal component analysis (PCA) was the same in spring and summer samples. However, the magnitude of the distance differed considerably between polymer types. Prokaryotic communities on polyethylene particles exhibited the most considerable difference to other particles in summer, while eukaryotic communities on polypropylene particles showed the most considerable difference to other spring samples. The most contributing bacterial taxa to the polyethylene-specific differentiation belong to the Planctomycetales, Saccharimonadales, Bryobacterales, uncultured Acidiomicrobia, and Gemmatimonadales. The most remarkable differences in eukaryotic microorganism abundances could be observed in several distinct groups of Ciliophora (ciliates) and Chlorophytes (green algae). Prediction of community functions from taxonomic abundances revealed differences between spring and summer, and – to a lesser extent – also between polymer types and mineral surfaces. Our results show that different microplastic particles were colonized by different biofilm communities. These findings may be used for advanced experimental designs to investigate the role of microorganisms on the fate of microplastic particles in freshwater ecosystems.
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Affiliation(s)
- Alfons R Weig
- Genomics and Bioinformatics, Bayreuth Center of Ecology and Environmental Research, University of Bayreuth, Bayreuth, Germany
| | - Martin G J Löder
- Animal Ecology, Bayreuth Center of Ecology and Environmental Research, University of Bayreuth, Bayreuth, Germany
| | - Anja F R M Ramsperger
- Animal Ecology, Bayreuth Center of Ecology and Environmental Research, University of Bayreuth, Bayreuth, Germany.,Biological Physics, University of Bayreuth, Bayreuth, Germany
| | - Christian Laforsch
- Animal Ecology, Bayreuth Center of Ecology and Environmental Research, University of Bayreuth, Bayreuth, Germany
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Abda EM, Muleta A, Tafesse M, Prabhu SV, Aemro A. Recent endeavors in microbial remediation of micro- and nanoplastics. PHYSICAL SCIENCES REVIEWS 2021. [DOI: 10.1515/psr-2021-0061] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
Abstract
Abstract
Petrochemical plastics are frequently utilized in our daily lives for various purposes such as packaging and transportation, but their burden on the environment is considered one of the most man-made pollution crises. These pollutants are slowly fragmented in the environment into microplastics and nanoplastics by consolidated actions of abiotic and biotic factors. Microplastics and nanoplastics can easily be dispersed in the atmosphere and be harmful to all kinds of life. As a result, the remediation of micro- and nanoplastics has recently received a tremendous research impetus in the realm of an ecologically benign approach, notably microbial-based remediation. Thus, the current article looks at the formation, properties, analysis, and biological effects of micro- and nanoplastics. The content is then streamlined towards a comprehensive discussion on microbial-mediated degradation of microplastics and nanoplastics, with an emphasis on front-line bacteria and enzymes, as well as remediation mechanisms. Further, technologies for the removal of microplastics and nanoplastics from the environment are presented for possible remedial considerations. An attempt is also made to highlight the practical snags of microbial plastic degradation while aiming to alleviate the environmental burden of plastic waste.
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Affiliation(s)
- Ebrahim M. Abda
- Department of Biotechnology , Addis Ababa Science and Technology University , P.O. Box 16417, Akaki Kality , Addis Ababa , Ethiopia
- Centre of Excellence- Biotechnology and Bioprocessing, Addis Ababa Science and Technology University , P.O. Box 16417, Akaki Kality , Addis Ababa , Ethiopia
| | - Atsede Muleta
- Department of Biology , University of Gondar , P.O. Box 196 , Gondar , Ethiopia
| | - Mesfin Tafesse
- Department of Biotechnology , Addis Ababa Science and Technology University , P.O. Box 16417, Akaki Kality , Addis Ababa , Ethiopia
- Centre of Excellence- Biotechnology and Bioprocessing, Addis Ababa Science and Technology University , P.O. Box 16417, Akaki Kality , Addis Ababa , Ethiopia
| | - Sundramurthy Venkatesa Prabhu
- Department of Chemical Engineering , Addis Ababa Science and Technology University , P.O. Box 16417, Akaki Kality , Addis Ababa , Ethiopia
| | - Afework Aemro
- Department of Environmental Engineering , Addis Ababa Science and Technology University , P.O. Box 16417, Akaki Kality , Addis Ababa , Ethiopia
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43
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Bacha AUR, Nabi I, Zhang L. Mechanisms and the Engineering Approaches for the Degradation of Microplastics. ACS ES&T ENGINEERING 2021; 1:1481-1501. [DOI: 10.1021/acsestengg.1c00216] [Citation(s) in RCA: 43] [Impact Index Per Article: 14.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/02/2023]
Affiliation(s)
- Aziz-Ur-Rahim Bacha
- Shanghai Key Laboratory of Atmospheric Particle Pollution and Prevention, Department of Environmental Science & Engineering, Fudan University, Shanghai 200433, Peoples’ Republic of China
| | - Iqra Nabi
- Shanghai Key Laboratory of Atmospheric Particle Pollution and Prevention, Department of Environmental Science & Engineering, Fudan University, Shanghai 200433, Peoples’ Republic of China
| | - Liwu Zhang
- Shanghai Key Laboratory of Atmospheric Particle Pollution and Prevention, Department of Environmental Science & Engineering, Fudan University, Shanghai 200433, Peoples’ Republic of China
- Shanghai Institute of Pollution Control and Ecological Security, Shanghai 200092, Peoples’ Republic of China
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44
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Hassan MAA, El-Saadony MT, Mostafa NG, El-Tahan AM, Mesiha PK, El-Saadony FMA, Hassan AM, El-Shehawi AM, Ashry NM. The use of previous crops as sustainable and eco-friendly management to fight Fusarium oxysporum in sesame plants. Saudi J Biol Sci 2021; 28:5849-5859. [PMID: 34588900 PMCID: PMC8459150 DOI: 10.1016/j.sjbs.2021.06.041] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/20/2021] [Revised: 06/03/2021] [Accepted: 06/13/2021] [Indexed: 11/30/2022] Open
Abstract
Sesame (Sesamum indicum L.), the “Queen of oil seeds” is being infected with pathogens, i.e., fungi, bacteria, virus and nematodes. Fusarium oxysporum sp. sesami (Zap.), is one of the fiercest pathogens causing severe economic losses on sesame. This work aimed to evaluate the impact of the cultivation of some preceding crops and seed inoculation with antagonistic predominant rhizospheric bacteria and actinomycetes on the incidence and development of Fusarium damping-off and wilt disease. Results showed that the lowest pre and/or post-emergence damping-off and wilt of sesame were recorded after onion and garlic, followed by wheat compared to clover in both the 2019 and 2020 seasons. In vitro, soil extracts from plots where onion and garlic have been cultivated slightly decreased the conidia germination and mycelium radial growth of F. oxysporum. The numbers of sesame rhizospheric F. oxysporum and fungi were lower after the cultivation of onion and garlic than those after wheat and clover. However, the numbers of actinomycetes and bacteria were higher in the onion, garlic, and clover rhizosphere than wheat. Among all isolated bacteria and actinomycetes associated with sesame roots cultivated after preceding plants, the Tricoderma viride and Bacillus subtilis (isolate No.3) profoundly reduce F. oxysporum mycelial growth in vitro. When sesame seeds were inoculated with Tricoderma viride, Bacillus subtilis, Streptomyces rochei and Pseudomonas fluorescens, the disease incidence of damping-off and wilt significantly decreased in the greenhouse and field trials conducted in both tested growing seasons, also had highly significant on plant health and growth parameters. Therefore, the current study suggested that using the preceding onion and garlic plants could be used for eco-friendly reduction of damping-off and wilt disease of sesame.
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Affiliation(s)
- Mokhles A A Hassan
- Agricultural Botany Department (Microbiology), Faculty of Agriculture, South Valley University, Qena 83523, Egypt
| | - Mohamed T El-Saadony
- Department of Agricultural Microbiology, Faculty of Agriculture, Zagazig University, 44511 Zagazig, Egypt
| | - Nadeen G Mostafa
- Department of Agricultural Microbiology, Faculty of Agriculture, Zagazig University, 44511 Zagazig, Egypt
| | - Amira M El-Tahan
- Plant Production Department, Arid Lands Cultivation Research Institute, The City of Scientific Research and Technological Applications, SRTA-City, Borg El Arab, Alexandria, Egypt
| | - Philemon K Mesiha
- Plant Pathology Department, Faculty of Agriculture, Zagazig University, 44511 Zagazig, Egypt
| | - Fathy M A El-Saadony
- Agricultural Botany Department, Faculty of Agriculture, Zagazig University, 44511 Zagazig, Egypt
| | - Aziza M Hassan
- Department of Biotechnology, College of Science, Taif University, P.O. Box 11099, Taif 21944, Saudi Arabia
| | - Ahmed M El-Shehawi
- Department of Biotechnology, College of Science, Taif University, P.O. Box 11099, Taif 21944, Saudi Arabia
| | - Noha M Ashry
- Agricultural Microbiology Department, Faculty of Agriculture, Benha University, Toukh 13736, Egypt
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45
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Almeida ACDA, Pontes JGDM, Alvarenga GR, Finocchio H, Fill TP. The sustainable cycle of a new cacao-based bioplastic: from manufacturing to exploitable biodegradation products. RSC Adv 2021; 11:29976-29985. [PMID: 35480269 PMCID: PMC9040866 DOI: 10.1039/d1ra04432j] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/08/2021] [Accepted: 09/02/2021] [Indexed: 12/17/2022] Open
Abstract
The exponential growth of plastic consumption in the last decade became a large economic and ecological issue; therefore, strategies have been used to mitigate the environmental impacts, including the manufacture of biodegradable bio-based plastics and biodegradation strategies. Herein, a new bio-based plastic was developed consisting of a polymeric recyclable matrix (polyethylene or polypropylene) with a vegetal polymeric material from cocoa husk. Mechanical and rheological properties were evaluated and the new material showed interesting tensile strength compared to completely non-biodegradable plastics. The new polymeric material was submitted to biodegradation processes using different fungi species. The biodegradation caused by Colletotrichum gloeosporioides, Xylaria sp. and Fusarium graminearum in the new polymeric material was analyzed through scanning electron microscopy with energy-dispersive X-ray spectroscopy (SEM-EDS) and tensile tests. Furthermore, ultra performance liquid chromatography coupled to tandem mass spectrometry (UPLC-MS/MS) and mass spectrometry imaging (MSI) were applied to identify metabolites produced in consequence to the biodegradation process. Interestingly, some compounds produced present high economic value.
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Affiliation(s)
- Allan Calmont de Andrade Almeida
- Universidade Estadual de Campinas (UNICAMP), Organic Chemistry, Laboratório de Biologia Química Microbiana (LABIOQUIMI) P. O. Box 6154 Campinas SP 13083-970 Brazil
| | - João Guilherme de Moraes Pontes
- Universidade Estadual de Campinas (UNICAMP), Organic Chemistry, Laboratório de Biologia Química Microbiana (LABIOQUIMI) P. O. Box 6154 Campinas SP 13083-970 Brazil
| | - Gabriel Rodrigues Alvarenga
- Universidade Estadual de Campinas (UNICAMP), Organic Chemistry, Laboratório de Biologia Química Microbiana (LABIOQUIMI) P. O. Box 6154 Campinas SP 13083-970 Brazil
| | | | - Taicia Pacheco Fill
- Universidade Estadual de Campinas (UNICAMP), Organic Chemistry, Laboratório de Biologia Química Microbiana (LABIOQUIMI) P. O. Box 6154 Campinas SP 13083-970 Brazil
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46
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Nikolaivits E, Pantelic B, Azeem M, Taxeidis G, Babu R, Topakas E, Brennan Fournet M, Nikodinovic-Runic J. Progressing Plastics Circularity: A Review of Mechano-Biocatalytic Approaches for Waste Plastic (Re)valorization. Front Bioeng Biotechnol 2021; 9:696040. [PMID: 34239864 PMCID: PMC8260098 DOI: 10.3389/fbioe.2021.696040] [Citation(s) in RCA: 28] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/16/2021] [Accepted: 05/28/2021] [Indexed: 01/10/2023] Open
Abstract
Inspirational concepts, and the transfer of analogs from natural biology to science and engineering, has produced many excellent technologies to date, spanning vaccines to modern architectural feats. This review highlights that answers to the pressing global petroleum-based plastic waste challenges, can be found within the mechanics and mechanisms natural ecosystems. Here, a suite of technological and engineering approaches, which can be implemented to operate in tandem with nature's prescription for regenerative material circularity, is presented as a route to plastics sustainability. A number of mechanical/green chemical (pre)treatment methodologies, which simulate natural weathering and arthropodal dismantling activities are reviewed, including: mechanical milling, reactive extrusion, ultrasonic-, UV- and degradation using supercritical CO2. Akin to natural mechanical degradation, the purpose of the pretreatments is to render the plastic materials more amenable to microbial and biocatalytic activities, to yield effective depolymerization and (re)valorization. While biotechnological based degradation and depolymerization of both recalcitrant and bioplastics are at a relatively early stage of development, the potential for acceleration and expedition of valuable output monomers and oligomers yields is considerable. To date a limited number of independent mechano-green chemical approaches and a considerable and growing number of standalone enzymatic and microbial degradation studies have been reported. A convergent strategy, one which forges mechano-green chemical treatments together with the enzymatic and microbial actions, is largely lacking at this time. An overview of the reported microbial and enzymatic degradations of petroleum-based synthetic polymer plastics, specifically: low-density polyethylene (LDPE), high-density polyethylene (HDPE), polystyrene (PS), polyethylene terephthalate (PET), polyurethanes (PU) and polycaprolactone (PCL) and selected prevalent bio-based or bio-polymers [polylactic acid (PLA), polyhydroxyalkanoates (PHAs) and polybutylene succinate (PBS)], is detailed. The harvesting of depolymerization products to produce new materials and higher-value products is also a key endeavor in effectively completing the circle for plastics. Our challenge is now to effectively combine and conjugate the requisite cross disciplinary approaches and progress the essential science and engineering technologies to categorically complete the life-cycle for plastics.
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Affiliation(s)
- Efstratios Nikolaivits
- Industrial Biotechnology & Biocatalysis Group, Biotechnology Laboratory, School of Chemical Engineering, National Technical University of Athens, Athens, Greece
| | - Brana Pantelic
- Eco-Biotechnology & Drug Development Group, Laboratory for Microbial Molecular Genetics and Ecology, Institute of Molecular Genetics and Genetic Engineering, University of Belgrade, Belgrade, Serbia
| | | | - George Taxeidis
- Industrial Biotechnology & Biocatalysis Group, Biotechnology Laboratory, School of Chemical Engineering, National Technical University of Athens, Athens, Greece
| | - Ramesh Babu
- AMBER Centre, CRANN Institute, School of Chemistry, Trinity College Dublin, Dublin, Ireland
| | - Evangelos Topakas
- Industrial Biotechnology & Biocatalysis Group, Biotechnology Laboratory, School of Chemical Engineering, National Technical University of Athens, Athens, Greece
| | | | - Jasmina Nikodinovic-Runic
- Eco-Biotechnology & Drug Development Group, Laboratory for Microbial Molecular Genetics and Ecology, Institute of Molecular Genetics and Genetic Engineering, University of Belgrade, Belgrade, Serbia
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47
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Sales JCS, Santos AG, de Castro AM, Coelho MAZ. A critical view on the technology readiness level (TRL) of microbial plastics biodegradation. World J Microbiol Biotechnol 2021; 37:116. [DOI: 10.1007/s11274-021-03089-0] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/25/2021] [Accepted: 06/07/2021] [Indexed: 12/26/2022]
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48
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Santacruz-Juárez E, Buendia-Corona RE, Ramírez RE, Sánchez C. Fungal enzymes for the degradation of polyethylene: Molecular docking simulation and biodegradation pathway proposal. JOURNAL OF HAZARDOUS MATERIALS 2021; 411:125118. [PMID: 33485228 DOI: 10.1016/j.jhazmat.2021.125118] [Citation(s) in RCA: 42] [Impact Index Per Article: 14.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/14/2020] [Revised: 12/17/2020] [Accepted: 01/08/2021] [Indexed: 06/12/2023]
Abstract
Polyethylene (PE) is one of the most highly consumed petroleum-based polymers and its accumulation as waste causes environmental pollution. In this sense, the use of microorganisms and their enzymes represents the most ecofriendly and effective decontamination approach. In this work, molecular docking simulation for catalytic enzyme degradation of PE was carried out using individual enzymes: laccase (Lac), manganese peroxidase (MnP), lignin peroxidase (LiP) and unspecific peroxygenase (UnP). PE-binding energy, PE-binding affinity and dimensions of PE-binding sites in the enzyme cavity were calculated in each case. Four hypothetical PE biodegradation pathways were proposed using individual enzymes, and one pathway was proposed using a synergic enzyme combination. These results show that in nature, enzymes act in a synergic manner, using their specific features to undertake an extraordinarily effective sequential catalytic process for organopollutants degradation. In this process, Lac (oxidase) is crucial to provide hydrogen peroxide to the medium to ensure pollutant breakdown. UnP is a versatile enzyme that offers a promising practical application for the degradation of PE and other pollutants due to its cavity features. This is the first in silico report of PE enzymatic degradation, showing the mode of interaction of PE with enzymes as well as the degradation mechanism.
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Affiliation(s)
- Ericka Santacruz-Juárez
- Universidad Politécnica de Tlaxcala. San Pedro Xalcatzinco, Tepeyanco, Tlaxcala C. P. 90180, Mexico
| | - Ricardo E Buendia-Corona
- Departamento de Fisicomatemáticas, Facultad de Ciencias Químicas, Benemérita Universidad Autónoma de Puebla, Av. San Claudio y 14 Sur, Col. San Manuel, C.P. 72570, Puebla, Pue., Mexico
| | - Ramsés E Ramírez
- Departamento de Fisicomatemáticas, Facultad de Ciencias Químicas, Benemérita Universidad Autónoma de Puebla, Av. San Claudio y 14 Sur, Col. San Manuel, C.P. 72570, Puebla, Pue., Mexico
| | - Carmen Sánchez
- Laboratory of Biotechnology, Research Centre for Biological Sciences, Universidad Autónoma de Tlaxcala, Ixtacuixtla, Tlaxcala C.P. 90120, Mexico.
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Ali SS, Elsamahy T, Koutra E, Kornaros M, El-Sheekh M, Abdelkarim EA, Zhu D, Sun J. Degradation of conventional plastic wastes in the environment: A review on current status of knowledge and future perspectives of disposal. THE SCIENCE OF THE TOTAL ENVIRONMENT 2021; 771:144719. [PMID: 33548729 DOI: 10.1016/j.scitotenv.2020.144719] [Citation(s) in RCA: 170] [Impact Index Per Article: 56.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/19/2020] [Revised: 11/30/2020] [Accepted: 12/21/2020] [Indexed: 05/23/2023]
Abstract
Accumulation of plastic wastes has been recently recognized as one of the most critical environmental challenges, affecting all life forms, natural ecosystems and economy, worldwide. Under this threat, finding alternative environmentally-friendly solutions, such as biodegradation instead of traditional disposal, is of utmost importance. However, up to date, there is limited knowledge on plastic biodegradation mechanisms and efficiency. From this point of view, the purpose of this review is to highlight the negative effects of the accumulation of the most conventional plastic waste (polyethylene, polypropylene, polystyrene, polyvinylchloride, polyethylene terephthalate and polyurethane) on the environment and to present their degradability potential through abiotic and biotic processes. Furthermore, the ability of different microbial species for degradation of these polymers is thoroughly discussed. The present review also addresses the contribution of invertebrates, such as insects, in plastic degradation process, highlighting the vital role that they could play in the future. In total, a schematic pathway of an innovative approach to improve the disposal of plastic wastes is proposed, with view to establishing an effective and sustainable practice for plastic waste management.
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Affiliation(s)
- Sameh Samir Ali
- Biofuels Institute, School of the Environment and Safety Engineering, Jiangsu University, Zhenjiang 212013, China; Botany Department, Faculty of Science, Tanta University, Tanta 31527, Egypt
| | - Tamer Elsamahy
- Biofuels Institute, School of the Environment and Safety Engineering, Jiangsu University, Zhenjiang 212013, China
| | - Eleni Koutra
- Laboratory of Biochemical Engineering & Environmental Technology (LBEET), Department of Chemical Engineering, University of Patras, 1 Karatheodori Str., University Campus, 26504 Patras, Greece; INVALOR: Research Infrastructure for Waste Valorization and Sustainable Management, University Campus, 26504 Patras, Greece
| | - Michael Kornaros
- Laboratory of Biochemical Engineering & Environmental Technology (LBEET), Department of Chemical Engineering, University of Patras, 1 Karatheodori Str., University Campus, 26504 Patras, Greece; INVALOR: Research Infrastructure for Waste Valorization and Sustainable Management, University Campus, 26504 Patras, Greece
| | - Mostafa El-Sheekh
- Botany Department, Faculty of Science, Tanta University, Tanta 31527, Egypt
| | - Esraa A Abdelkarim
- Biofuels Institute, School of the Environment and Safety Engineering, Jiangsu University, Zhenjiang 212013, China
| | - Daochen Zhu
- Biofuels Institute, School of the Environment and Safety Engineering, Jiangsu University, Zhenjiang 212013, China
| | - Jianzhong Sun
- Biofuels Institute, School of the Environment and Safety Engineering, Jiangsu University, Zhenjiang 212013, China.
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50
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DSouza GC, Sheriff RS, Ullanat V, Shrikrishna A, Joshi AV, Hiremath L, Entoori K. Fungal biodegradation of low-density polyethylene using consortium of Aspergillus species under controlled conditions. Heliyon 2021; 7:e07008. [PMID: 34036194 PMCID: PMC8138607 DOI: 10.1016/j.heliyon.2021.e07008] [Citation(s) in RCA: 18] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/23/2020] [Revised: 04/05/2021] [Accepted: 04/30/2021] [Indexed: 11/06/2022] Open
Abstract
Low-Density polyethylene is subject to biodegradation using a fungal consortium comprising of Aspergillus niger, Aspergillus flavus and Aspergillus oryzae under laboratory conditions. The extent of biodegradation has been compared with the use of potato dextrose broth and czapek dox broth media and also in the presence and absence of Tween 80 additive. Biodegradation was performed replacing the sucrose in czapek dox broth with shredded Low-Density polyethylene as well. The biodegradation was carried out for a period of 55 days. The degree of biodegradation has been analyzed using the loss of weight, FT-IR, and SEM analysis. A maximum weight loss of 26.15% was obtained by using potato dextrose broth over a period of 55 days.
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Affiliation(s)
- Glen Cletus DSouza
- Department of Chemical Engineering, R V College of Engineering, Bengaluru, 560059 India.,Department of Chemical and Biochemical Engineering, The University of Western Ontario, London, Ontario, N6A 5B9, Canada
| | - Ryna Shireen Sheriff
- Department of Biotechnology, R V College of Engineering, Bengaluru, 560059 India
| | - Varun Ullanat
- Department of Biotechnology, R V College of Engineering, Bengaluru, 560059 India
| | - Aniruddh Shrikrishna
- Department of Chemical Engineering, R V College of Engineering, Bengaluru, 560059 India.,Department of Chemical Engineering, University of Florida, Gainesville, FL, USA 32603
| | - Anupama V Joshi
- Department of Chemical Engineering, R V College of Engineering, Bengaluru, 560059 India
| | - Lingayya Hiremath
- Department of Biotechnology, R V College of Engineering, Bengaluru, 560059 India
| | - Keshamma Entoori
- Department of Biochemistry, Maharani's Science College for Women, Bengaluru, 560001 India
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