1
|
Murgia I, Morandini P. Plant Iron Research in African Countries: Current "Hot Spots", Approaches, and Potentialities. PLANTS (BASEL, SWITZERLAND) 2023; 13:14. [PMID: 38202322 PMCID: PMC10780554 DOI: 10.3390/plants13010014] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/15/2023] [Revised: 12/14/2023] [Accepted: 12/17/2023] [Indexed: 01/12/2024]
Abstract
Plant iron (Fe) nutrition and metabolism is a fascinating and challenging research topic; understanding the role of Fe in the life cycle of plants requires knowledge of Fe chemistry and biochemistry and their impact during development. Plant Fe nutritional status is dependent on several factors, including the surrounding biotic and abiotic environments, and influences crop yield and the nutritional quality of edible parts. The relevance of plant Fe research will further increase globally, particularly for Africa, which is expected to reach 2.5 billion people by 2050. The aim of this review is to provide an updated picture of plant Fe research conducted in African countries to favor its dissemination within the scientific community. Three main research hotspots have emerged, and all of them are related to the production of plants of superior quality, i.e., development of Fe-dense crops, development of varieties resilient to Fe toxicity, and alleviation of Fe deficiency, by means of Fe nanoparticles for sustainable agriculture. An intensification of research collaborations between the African research groups and plant Fe groups worldwide would be beneficial for the progression of the identified research topics.
Collapse
Affiliation(s)
- Irene Murgia
- Department of Environmental Science and Policy, Università degli Studi di Milano, Via Celoria 10, 20133 Milan, Italy;
| | | |
Collapse
|
2
|
Khan A, Pudhuvai B, Shrestha A, Mishra AK, Shah MP, Koul B, Dey N. CRISPR-mediated iron and folate biofortification in crops: advances and perspectives. Biotechnol Genet Eng Rev 2023:1-31. [PMID: 37092872 DOI: 10.1080/02648725.2023.2205202] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/25/2023]
Abstract
Micronutrient deficiency conditions, such as anemia, are the most prevalent global health problem due to inadequate iron and folate in dietary sources. Biofortification advancements can propel the rapid amelioration of nutritionally beneficial components in crops that are required to combat the adverse effects of micronutrient deficiencies on human health. To date, several strategies have been proposed to increase micronutrients in plants to improve food quality, but very few approaches have intrigued `clustered regularly interspaced short palindromic repeats' (CRISPR) modules for the enhancement of iron and folate concentration in the edible parts of plants. In this review, we discuss two important approaches to simultaneously enhance the bioavailability of iron and folate concentrations in rice endosperms by utilizing advanced CRISPR-Cas9-based technology. This includes the 'tuning of cis-elements' and 'enhancer re-shuffling' in the regulatory components of genes that play a vital role in iron and folate biosynthesis/transportation pathways. In particular, base-editing and enhancer re-installation in native promoters of selected genes can lead to enhanced accumulation of iron and folate levels in the rice endosperm. The re-distribution of micronutrients in specific plant organs can be made possible using the above-mentioned contemporary approaches. Overall, the present review discusses the possible approaches for synchronized iron and folate biofortification through modification in regulatory gene circuits employing CRISPR-Cas9 technology.
Collapse
Affiliation(s)
- Ahamed Khan
- Biology Centre of the Czech Academy of Sciences, Institute of Plant Molecular Biology, České Budějovice, Czech Republic
| | - Baveesh Pudhuvai
- Department of Genetics and Biotechnology, Faculty of Agriculture and Technology, University of South Bohemia in České Budějovice, České Budějovice, Czech Republic
| | - Ankita Shrestha
- Division of Microbial and Plant Biotechnology, Department of Biotechnology, Government of India, Institute of Life Sciences, Bhubaneswar, Odisha, India
| | - Ajay Kumar Mishra
- Khalifa Centre for Genetic Engineering and Biotechnology, United Arab Emirates University, Al Ain, United Arab Emirates
| | - Maulin P Shah
- Division of Applied and Environmental Microbiology, Enviro Technology Ltd, Ankleshwar, Gujarat, India
| | - Bhupendra Koul
- Department of Biotechnology, Lovely Professional University, Phagwara, Punjab, India
| | - Nrisingha Dey
- Division of Microbial and Plant Biotechnology, Department of Biotechnology, Government of India, Institute of Life Sciences, Bhubaneswar, Odisha, India
| |
Collapse
|
3
|
Ma L, Yan X, Zhou L, Wang W, Chen K, Hao C, Lu Z, Qie X. Nitric oxide synthase is required for the pea aphid's defence against bacterial infection. INSECT MOLECULAR BIOLOGY 2023; 32:187-199. [PMID: 36527288 DOI: 10.1111/imb.12823] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/27/2022] [Accepted: 12/09/2022] [Indexed: 06/17/2023]
Abstract
Compared to other insects, the pea aphid Acyrthosiphon pisum has a reduced immune system with an absence of genes coding for a lot of immunity-related molecules. Notably, nitric oxide synthase (NOS), which catalyses the synthesis of nitric oxide (NO), is present in the pea aphid. However, the role of NO in the immune system of pea aphid remains unclear. In this study, we explored the role of NO in the defence of the pea aphid against bacterial infections and found that the NOS gene of the pea aphid responded to an immune challenge, with the expression of ApNOS observably upregulated after bacterial infections. Knockdown of ApNOS using RNA interference or inhibition of NOS activity increased the number of live bacterial cells in aphids and the mortality of aphids after bacterial infection. Conversely, the increase in NO level in aphids using NO donor inhibited the bacterial growth, increased the survival of bacteria-infected aphids, and upregulated immune genes, such as Toll pathway and phagocytosis related genes. Thus, NO promotes immune responses and plays an important role in the immune system of pea aphid.
Collapse
Affiliation(s)
- Li Ma
- Department of Plant Protection, College of Plant Protection, Shanxi Agricultural University, Taigu, China
| | - Xizhong Yan
- Department of Plant Protection, College of Plant Protection, Shanxi Agricultural University, Taigu, China
| | - Lin Zhou
- Department of Entomology, College of Plant Protection, Northwest A & F University, Yangling, China
| | - Wentao Wang
- Department of Plant Protection, College of Plant Protection, Shanxi Agricultural University, Taigu, China
| | - Kangkang Chen
- Department of Plant Protection, College of Horticulture and Plant Protection, Yangzhou University, Yangzhou, China
| | - Chi Hao
- Department of Plant Protection, College of Plant Protection, Shanxi Agricultural University, Taigu, China
| | - Zhiqiang Lu
- Department of Entomology, College of Plant Protection, Northwest A & F University, Yangling, China
- Key Laboratory of Integrated Pest Management on Crops in Northwestern Loess, Ministry of Agriculture, Northwest A & F University, Yangling, China
| | - Xingtao Qie
- Department of Plant Protection, College of Plant Protection, Shanxi Agricultural University, Taigu, China
| |
Collapse
|
4
|
Hussain A, Shah F, Ali F, Yun BW. Role of Nitric Oxide in Plant Senescence. FRONTIERS IN PLANT SCIENCE 2022; 13:851631. [PMID: 35463429 PMCID: PMC9022112 DOI: 10.3389/fpls.2022.851631] [Citation(s) in RCA: 12] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/10/2022] [Accepted: 03/15/2022] [Indexed: 05/27/2023]
Abstract
In plants senescence is the final stage of plant growth and development that ultimately leads to death. Plants experience age-related as well as stress-induced developmental ageing. Senescence involves significant changes at the transcriptional, post-translational and metabolomic levels. Furthermore, phytohormones also play a critical role in the programmed senescence of plants. Nitric oxide (NO) is a gaseous signalling molecule that regulates a plethora of physiological processes in plants. Its role in the control of ageing and senescence has just started to be elucidated. Here, we review the role of NO in the regulation of programmed cell death, seed ageing, fruit ripening and senescence. We also discuss the role of NO in the modulation of phytohormones during senescence and the significance of NO-ROS cross-talk during programmed cell death and senescence.
Collapse
Affiliation(s)
- Adil Hussain
- Department of Entomology, Abdul Wali Khan University Mardan, Mardan, Pakistan
| | - Farooq Shah
- Department of Agronomy, Abdul Wali Khan University Mardan, Mardan, Pakistan
| | - Farman Ali
- Department of Entomology, Abdul Wali Khan University Mardan, Mardan, Pakistan
| | - Byung-Wook Yun
- Department of Applied Biosciences, College of Agriculture and Life Science, Kyungpook National University, Daegu, South Korea
| |
Collapse
|
5
|
Murgia I, Marzorati F, Vigani G, Morandini P. Plant iron nutrition: the long road from soil to seeds. JOURNAL OF EXPERIMENTAL BOTANY 2022; 73:1809-1824. [PMID: 34864996 DOI: 10.1093/jxb/erab531] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/29/2021] [Accepted: 12/03/2021] [Indexed: 06/13/2023]
Abstract
Iron (Fe) is an essential plant micronutrient since many cellular processes including photosynthesis, respiration, and the scavenging of reactive oxygen species depend on adequate Fe levels; however, non-complexed Fe ions can be dangerous for cells, as they can act as pro-oxidants. Hence, plants possess a complex homeostatic control system for safely taking up Fe from the soil and transporting it to its various cellular destinations, and for its subcellular compartmentalization. At the end of the plant's life cycle, maturing seeds are loaded with the required amount of Fe needed for germination and early seedling establishment. In this review, we discuss recent findings on how the microbiota in the rhizosphere influence and interact with the strategies adopted by plants to take up iron from the soil. We also focus on the process of seed-loading with Fe, and for crop species we also consider its associated metabolism in wild relatives. These two aspects of plant Fe nutrition may provide promising avenues for a better comprehension of the long pathway of Fe from soil to seeds.
Collapse
Affiliation(s)
- Irene Murgia
- Department of Biosciences, University of Milano, Milano, Italy
| | - Francesca Marzorati
- Department of Environmental Science and Policy, University of Milano, Milano, Italy
| | - Gianpiero Vigani
- Plant Physiology Unit, Department of Life Sciences and Systems Biology, University of Torino, Torino, Italy
| | - Piero Morandini
- Department of Environmental Science and Policy, University of Milano, Milano, Italy
| |
Collapse
|
6
|
Singh N, Bhatla SC. Heme oxygenase-nitric oxide crosstalk-mediated iron homeostasis in plants under oxidative stress. Free Radic Biol Med 2022; 182:192-205. [PMID: 35247570 DOI: 10.1016/j.freeradbiomed.2022.02.034] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 11/29/2021] [Revised: 02/25/2022] [Accepted: 02/28/2022] [Indexed: 12/22/2022]
Abstract
Plant growth under abiotic stress conditions significantly enhances intracellular generation of reactive oxygen species (ROS). Oxidative status of plant cells is directly affected by the modulation of iron homeostasis. Among mammals and plants, heme oxygenase-1 (HO-1) is a well-known antioxidant enzyme. It catalyzes oxygenation of heme, thereby producing Fe2+, CO and biliverdin as byproducts. The antioxidant potential of HO-1 is primarily due to its catalytic reaction byproducts. Biliverdin and bilirubin possess conjugated π-electrons which escalate the ability of these biomolecules to scavenge free radicals. CO also enhances the ROS scavenging ability of plants cells by upregulating catalase and peroxidase activity. Enhanced expression of HO-1 in plants under oxidative stress accompanies sequestration of iron in specialized iron storage proteins localized in plastids and mitochondria, namely ferritin for Fe3+ storage and frataxin for storage of Fe-S clusters, respectively. Nitric oxide (NO) crosstalks with HO-1 at multiple levels, more so in plants under oxidative stress, in order to maintain intracellular iron status. Formation of dinitrosyl-iron complexes (DNICs) significantly prevents Fenton reaction during oxidative stress. DNICs also release NO upon dissociation in target cells over long distance in plants. They also function as antioxidants against superoxide anions and lipidic free radicals. A number of NO-modulated transcription factors also facilitate iron homeostasis in plant cells. Plants facing oxidative stress exhibit modulation of lateral root formation by HO-1 through NO and auxin-dependent pathways. The present review provides an in-depth analysis of the structure-function relationship of HO-1 in plants and mammals, correlating them with their adaptive mechanisms of survival under stress.
Collapse
Affiliation(s)
- Neha Singh
- Department of Botany, Gargi College, University of Delhi, India.
| | - Satish C Bhatla
- Laboratory of Plant Physiology and Biochemistry, Department of Botany, University of Delhi, Delhi, 110007, India.
| |
Collapse
|
7
|
Zahra N, Hafeez MB, Shaukat K, Wahid A, Hasanuzzaman M. Fe toxicity in plants: Impacts and remediation. PHYSIOLOGIA PLANTARUM 2021; 173:201-222. [PMID: 33547807 DOI: 10.1111/ppl.13361] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/21/2020] [Revised: 01/17/2021] [Accepted: 02/01/2021] [Indexed: 05/07/2023]
Abstract
Fe is the fourth abundant element in the earth crust. Fe toxicity is not often discussed in plant science though it causes severe morphological and physiological disorders, including reduced germination percentage, interferes with enzymatic activities, nutritional imbalance, membrane damage, and chloroplast ultrastructure. It also causes severe toxicity to important biomolecules, which leads to ferroptotic cell death and induces structural changes in the photosynthetic apparatus, which results in retardation of carbon metabolism. However, some agronomic practices like soil remediation through chemicals, nutrients, and organic amendments and some breeding and genetic approaches can provide fruitful results in enhancing crop production in Fe-contaminated soils. Some quantitative trait loci have been reported for Fe tolerance in plants but the function of underlying genes is just emerging. Physiological and molecular mechanism of Fe uptake, translocation, toxicity, and remediation techniques are still under experimentation. In this review, the toxic effects of Fe on seed germination, carbon assimilation, water relations, nutrient uptake, oxidative damages, enzymatic activities, and overall plant growth and development have been discussed. The Fe dynamics in soil rhizosphere and role of remediation strategies, that is, biological, physical, and chemical, have also been described. Use of organic amendments, microbe, phytoremediation, and biological strategies is considered to be both cost and environment friendly for the purification of Fe-contaminated soil, while to ensure better crop yield and quality the manipulation of agronomic practices are suggested.
Collapse
Affiliation(s)
- Noreen Zahra
- Department of Botany, University of Agriculture, Faisalabad, Pakistan
| | | | - Kanval Shaukat
- Department of Botany, University of Balochistan, Quetta, Pakistan
| | - Abdul Wahid
- Department of Botany, University of Agriculture, Faisalabad, Pakistan
| | - Mirza Hasanuzzaman
- Department of Agronomy, Faculty of Agriculture, Sher-e-Bangla Agricultural University, Dhaka, Bangladesh
| |
Collapse
|
8
|
Bandyopadhyay T, Prasad M. IRONing out stress problems in crops: a homeostatic perspective. PHYSIOLOGIA PLANTARUM 2021; 171:559-577. [PMID: 32770754 DOI: 10.1111/ppl.13184] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/15/2020] [Accepted: 07/25/2020] [Indexed: 06/11/2023]
Abstract
Iron (Fe) is essential for plant growth and therefore plays a key role in influencing crop productivity worldwide. Apart from its central role in chlorophyll biosynthesis and oxidative phosphorylation (electron transfer), it is an important constituent of many enzymes involved in primary metabolism. Fe has different accessibilities to the roots in the rhizosphere depending upon whether it is ferrous (soluble) or ferric (insoluble) oxidation stages, which in turn, determine two kinds of Fe uptake strategies employed by the plants. The reduction strategy is exclusively found in non-graminaceous plants wherein the ferrous Fe2+ is absorbed and translocated from the soil through specialized transporters. In contrast, the chelation strategy (widespread in graminaceous plants) relies on the formation of Fe (III)-chelate complex as the necessary requirement of Fe uptake. Once inside the cell, Fe is translocated, compartmentalized and stored through a common set of physiological processes involving many transporters and enzymes whose functions are controlled by underlying genetic components, so that a fine balance of Fe homeostasis is maintained. Recently, molecular and mechanistic aspects of the process involving the role of transcription factors, signaling components, and cis-acting elements have been obtained, which has enabled a much better understanding of its ecophysiology. This mini-review summarizes recent developments in our understanding of Fe transport in higher plants with particular emphasis on crops in the context of major agronomically important abiotic stresses. It also highlights outstanding questions on the regulation of Fe homeostasis and lists potentially useful genes/regulatory pathways that may be useful for subsequent crop improvement under the stresses discussed through either conventional or transgenic approaches.
Collapse
Affiliation(s)
| | - Manoj Prasad
- National Institute of Plant Genome Research, Aruna Asaf Ali Marg, New Delhi, 110067, India
| |
Collapse
|
9
|
Tewari RK, Horemans N, Watanabe M. Evidence for a role of nitric oxide in iron homeostasis in plants. JOURNAL OF EXPERIMENTAL BOTANY 2021; 72:990-1006. [PMID: 33196822 DOI: 10.1093/jxb/eraa484] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/26/2020] [Accepted: 10/13/2020] [Indexed: 05/27/2023]
Abstract
Nitric oxide (NO), once regarded as a poisonous air pollutant, is now understood as a regulatory molecule essential for several biological functions in plants. In this review, we summarize NO generation in different plant organs and cellular compartments, and also discuss the role of NO in iron (Fe) homeostasis, particularly in Fe-deficient plants. Fe is one of the most limiting essential nutrient elements for plants. Plants often exhibit Fe deficiency symptoms despite sufficient tissue Fe concentrations. NO appears to not only up-regulate Fe uptake mechanisms but also makes Fe more bioavailable for metabolic functions. NO forms complexes with Fe, which can then be delivered into target cells/tissues. NO generated in plants can alleviate oxidative stress by regulating antioxidant defense processes, probably by improving functional Fe status and by inducing post-translational modifications in the enzymes/proteins involved in antioxidant defense responses. It is hypothesized that NO acts in cooperation with transcription factors such as bHLHs, FIT, and IRO to regulate the expression of enzymes and proteins essential for Fe homeostasis. However, further investigations are needed to disentangle the interaction of NO with intracellular target molecules that leads to enhanced internal Fe availability in plants.
Collapse
Affiliation(s)
| | - Nele Horemans
- Biosphere Impact Studies, Belgian Nuclear Research Center (SCK•CEN), Boeretang, Mol, Belgium
- Centre for Environmental Sciences, Hasselt University, Agoralaan gebouw D, Diepenbeek, Belgium
| | - Masami Watanabe
- Laboratory of Plant Biochemistry, Chiba University, Inage-ward, Yayoicho, Chiba, Japan
| |
Collapse
|
10
|
Chen J, Zhang NN, Pan Q, Lin XY, Shangguan Z, Zhang JH, Wei GH. Hydrogen sulphide alleviates iron deficiency by promoting iron availability and plant hormone levels in Glycine max seedlings. BMC PLANT BIOLOGY 2020; 20:383. [PMID: 32819279 PMCID: PMC7441670 DOI: 10.1186/s12870-020-02601-2] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/24/2019] [Accepted: 08/16/2020] [Indexed: 06/11/2023]
Abstract
BACKGROUND Hydrogen sulphide (H2S) is involved in regulating physiological processes in plants. We investigated how H2S ameliorates iron (Fe) deficiency in soybean (Glycine max L.) seedlings. Multidisciplinary approaches including physiological, biochemical and molecular, and transcriptome methods were used to investigate the H2S role in regulating Fe availability in soybean seedlings. RESULTS Our results showed that H2S completely prevented leaf interveinal chlorosis and caused an increase in soybean seedling biomass under Fe deficiency conditions. Moreover, H2S decreased the amount of root-bound apoplastic Fe and increased the Fe content in leaves and roots by regulating the ferric-chelate reductase (FCR) activities and Fe homeostasis- and sulphur metabolism-related gene expression levels, thereby promoting photosynthesis in soybean seedlings. In addition, H2S changed the plant hormone concentrations by modulating plant hormone-related gene expression abundances in soybean seedlings grown in Fe-deficient solution. Furthermore, organic acid biosynthesis and related genes expression also played a vital role in modulating the H2S-mediated alleviation of Fe deficiency in soybean seedlings. CONCLUSION Our results indicated that Fe deficiency was alleviated by H2S through enhancement of Fe acquisition and assimilation, thereby regulating plant hormones and organic acid synthesis in plants.
Collapse
Affiliation(s)
- Juan Chen
- State Key Laboratory of Soil Erosion and Dryland Farming on the Loess Plateau, Northwest A&F University, Yangling, Shaanxi, 712100, P.R. China.
- School of Life Sciences and State Key Laboratory of Agrobiotechnology, the Chinese University of Hong Kong, Shatin, Hong Kong.
| | - Ni-Na Zhang
- State Key Laboratory of Soil Erosion and Dryland Farming on the Loess Plateau, Northwest A&F University, Yangling, Shaanxi, 712100, P.R. China
| | - Qing Pan
- State Key Laboratory of Soil Erosion and Dryland Farming on the Loess Plateau, Northwest A&F University, Yangling, Shaanxi, 712100, P.R. China
| | - Xue-Yuan Lin
- State Key Laboratory of Soil Erosion and Dryland Farming on the Loess Plateau, Northwest A&F University, Yangling, Shaanxi, 712100, P.R. China
| | - Zhouping Shangguan
- State Key Laboratory of Soil Erosion and Dryland Farming on the Loess Plateau, Northwest A&F University, Yangling, Shaanxi, 712100, P.R. China
| | - Jian-Hua Zhang
- School of Life Sciences and State Key Laboratory of Agrobiotechnology, the Chinese University of Hong Kong, Shatin, Hong Kong
- Department of Biology, Hong Kong Baptist University, Kowloon Tong, Hong Kong
| | - Ge-Hong Wei
- State Key Laboratory of Soil Erosion and Dryland Farming on the Loess Plateau, Northwest A&F University, Yangling, Shaanxi, 712100, P.R. China.
| |
Collapse
|
11
|
Buet A, Galatro A, Ramos-Artuso F, Simontacchi M. Nitric oxide and plant mineral nutrition: current knowledge. JOURNAL OF EXPERIMENTAL BOTANY 2019; 70:4461-4476. [PMID: 30903155 DOI: 10.1093/jxb/erz129] [Citation(s) in RCA: 45] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/30/2018] [Accepted: 03/14/2019] [Indexed: 05/20/2023]
Abstract
Plants under conditions of essential mineral deficiency trigger signaling mechanisms that involve common components. Among these components, nitric oxide (NO) has been identified as a key participant in responses to changes in nutrient availability. Usually, nutrient imbalances affect the levels of NO in specific plant tissues, via modification of its rate of synthesis or degradation. Changes in the level of NO affect plant morphology and/or trigger responses associated with nutrient homeostasis, mediated by its interaction with reactive oxygen species, phytohormones, and through post-translational modification of proteins. NO-related events constitute an exciting field of research to understand how plants adapt and respond to conditions of nutrient shortage. This review summarizes the current knowledge on NO as a component of the multiple processes related to plant performance under conditions of deficiency in mineral nutrients, focusing on macronutrients such as nitrogen, phosphate, potassium, and magnesium, as well as micronutrients such as iron and zinc.
Collapse
Affiliation(s)
- Agustina Buet
- Instituto de Fisiología Vegetal, CCT-La Plata, Consejo Nacional de Investigaciones Científicas y Técnicas, La Plata, Buenos Aires, Argentina
- Facultad de Ciencias Agrarias y Forestales, Universidad Nacional de La Plata, La Plata, Argentina
| | - Andrea Galatro
- Instituto de Fisiología Vegetal, CCT-La Plata, Consejo Nacional de Investigaciones Científicas y Técnicas, La Plata, Buenos Aires, Argentina
| | - Facundo Ramos-Artuso
- Instituto de Fisiología Vegetal, CCT-La Plata, Consejo Nacional de Investigaciones Científicas y Técnicas, La Plata, Buenos Aires, Argentina
- Facultad de Ciencias Agrarias y Forestales, Universidad Nacional de La Plata, La Plata, Argentina
| | - Marcela Simontacchi
- Instituto de Fisiología Vegetal, CCT-La Plata, Consejo Nacional de Investigaciones Científicas y Técnicas, La Plata, Buenos Aires, Argentina
- Facultad de Ciencias Agrarias y Forestales, Universidad Nacional de La Plata, La Plata, Argentina
| |
Collapse
|
12
|
Marondedze C, Thomas L, Gehring C, Lilley KS. Changes in the Arabidopsis RNA-binding proteome reveal novel stress response mechanisms. BMC PLANT BIOLOGY 2019; 19:139. [PMID: 30975080 PMCID: PMC6460520 DOI: 10.1186/s12870-019-1750-x] [Citation(s) in RCA: 33] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/23/2018] [Accepted: 03/31/2019] [Indexed: 05/24/2023]
Abstract
BACKGROUND RNA-binding proteins (RBPs) are increasingly recognized as regulatory component of post-transcriptional gene expression. RBPs interact with mRNAs via RNA-binding domains and these interactions affect RNA availability for translation, RNA stability and turn-over thus affecting both RNA and protein expression essential for developmental and stimulus specific responses. Here we investigate the effect of severe drought stress on the RNA-binding proteome to gain insights into the mechanisms that govern drought stress responses at the systems level. RESULTS Label-free mass spectrometry enabled the identification 567 proteins of which 150 significantly responded to the drought-induced treatment. A gene ontology analysis revealed enrichment in the "RNA binding" and "RNA processing" categories as well as biological processes such as "response to abscisic acid" and "response to water deprivation". Importantly, a large number of the stress responsive proteins have not previously been identified as RBPs and include proteins in carbohydrate metabolism and in the glycolytic and citric acid pathways in particular. This suggests that RBPs have hitherto unknown roles in processes that govern metabolic changes during stress responses. Furthermore, a comparative analysis of RBP domain architectures shows both, plant specific and common domain architectures between plants and animals. The latter could be an indication that RBPs are part of an ancient stress response. CONCLUSION This study establishes mRNA interactome capture technique as an approach to study stress signal responses implicated in environmental changes. Our findings denote RBP changes in the proteome as critical components in plant adaptation to changing environments and in particular drought stress protein-dependent changes in RNA metabolism.
Collapse
Affiliation(s)
- Claudius Marondedze
- Cambridge Centre for Proteomics, Cambridge Systems Biology Centre, and Department of Biochemistry, University of Cambridge, Tennis Court Road, Cambridge, CB2 1GA, UK.
- Division of Biological and Environmental Sciences and Engineering, King Abdullah University of Science and Technology, 23955-6900, Thuwal, Kingdom of Saudi Arabia.
- Present Address: Laboratoire de Physiologie Cellulaire et Végétale, Université Grenoble Alpes, CEA/DRF/BIG, INRA UMR1417, CNRS UMR5168, 38054, Grenoble Cedex 9, France.
| | - Ludivine Thomas
- Division of Biological and Environmental Sciences and Engineering, King Abdullah University of Science and Technology, 23955-6900, Thuwal, Kingdom of Saudi Arabia
- Present Address: HM.Clause, rue Louis Saillant, 26802, Portes-lès-Valence, France
| | - Chris Gehring
- Division of Biological and Environmental Sciences and Engineering, King Abdullah University of Science and Technology, 23955-6900, Thuwal, Kingdom of Saudi Arabia
- Department of Chemistry, Biology and Biotechnology, University of Perugia, 74 Borgo XX Giugno, 06121, Perugia, Italy
| | - Kathryn S Lilley
- Cambridge Centre for Proteomics, Cambridge Systems Biology Centre, and Department of Biochemistry, University of Cambridge, Tennis Court Road, Cambridge, CB2 1GA, UK
| |
Collapse
|
13
|
Del Castello F, Nejamkin A, Cassia R, Correa-Aragunde N, Fernández B, Foresi N, Lombardo C, Ramirez L, Lamattina L. The era of nitric oxide in plant biology: Twenty years tying up loose ends. Nitric Oxide 2019; 85:17-27. [DOI: 10.1016/j.niox.2019.01.013] [Citation(s) in RCA: 39] [Impact Index Per Article: 7.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/25/2018] [Revised: 01/08/2019] [Accepted: 01/25/2019] [Indexed: 10/27/2022]
|
14
|
Kobayashi T, Nozoye T, Nishizawa NK. Iron transport and its regulation in plants. Free Radic Biol Med 2019; 133:11-20. [PMID: 30385345 DOI: 10.1016/j.freeradbiomed.2018.10.439] [Citation(s) in RCA: 133] [Impact Index Per Article: 26.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 07/06/2018] [Revised: 10/22/2018] [Accepted: 10/23/2018] [Indexed: 12/15/2022]
Abstract
Iron is an essential element for plants as well as other organisms, functioning in various cellular processes, including respiration, chlorophyll biosynthesis, and photosynthesis. Plants take up iron from soil in which iron solubility is extremely low especially under aerobic conditions at high-pH range. Therefore, plants have evolved efficient iron-uptake mechanisms. Because iron is prone to being precipitated and excess ionic iron is cytotoxic, plants also have sophisticated internal iron-transport mechanisms. These transport mechanisms comprise iron chelators including nicotianamine, mugineic acid family phytosiderophores and citrate, and various types of transporters of these chelators, iron-chelate complexes, or free iron ions. To maintain iron homeostasis, plants have developed mechanisms for regulating gene expression in response to iron availability. Expression of various genes involved in iron uptake and translocation is induced under iron deficiency by transcription factor networks and is negatively regulated by the ubiquitin ligase HRZ/BTS. This response is deduced to be mediated by cellular iron sensing as well as long-distance iron signaling. The ubiquitin ligase HRZ/BTS is a candidate intracellular iron sensor because it binds to iron and zinc, and its activity is affected by iron availability. The iron-excess response of plants is thought to be partially independent of the iron-deficiency response. In this review, we summarize and discuss extant knowledge of plant iron transport and its regulation.
Collapse
Affiliation(s)
- Takanori Kobayashi
- Research Institute for Bioresources and Biotechnology, Ishikawa Prefectural University, 1-308 Suematsu, Nonoichi, Ishikawa 921-8836, Japan
| | - Tomoko Nozoye
- Center for Liberal Arts, Meiji Gakuin University, 1518 Kamikurata-cho, Totsuka-ku, Yokohama, Kanagawa 244-8539, Japan; Graduate School of Agricultural and Life Sciences, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, Tokyo 113-8657, Japan
| | - Naoko K Nishizawa
- Research Institute for Bioresources and Biotechnology, Ishikawa Prefectural University, 1-308 Suematsu, Nonoichi, Ishikawa 921-8836, Japan; Graduate School of Agricultural and Life Sciences, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, Tokyo 113-8657, Japan.
| |
Collapse
|
15
|
Kaya C, Akram NA, Ashraf M. Influence of exogenously applied nitric oxide on strawberry (Fragaria × ananassa) plants grown under iron deficiency and/or saline stress. PHYSIOLOGIA PLANTARUM 2019; 165:247-263. [PMID: 30091474 DOI: 10.1111/ppl.12818] [Citation(s) in RCA: 25] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/24/2018] [Revised: 08/01/2018] [Accepted: 08/06/2018] [Indexed: 05/26/2023]
Abstract
A study was carried out to assess the protective effects of exogenously applied nitric oxide (NO) in the form of its donor sodium nitroprusside (SNP) to strawberry seedlings (Fragaria × ananassa cv. Camarosa) grown under iron deficiency (ID), salinity stress or combination of both. The experimental design contained control, 0.1 mM FeSO4 (ID, Fe deficiency); 50 mM NaCl (S, Salinity) and ID + S. Plants were sprayed with 0.1 mM SNP or 0.1 mM sodium ferrocyanide, an analogue of SNP containing no NO. The deleterious effects of ID + S treatments on plant fresh and dry matters, total chlorophyll and chlorophyll fluorescence were more striking than those caused by the ID or S treatment alone. Furthermore, combination of salinity and iron stress exacerbated electrolyte leakage (EL) and the levels of malondialdehyde (MDA) and hydrogen peroxide (H2 O2 ) in plant leaves compared to those in plants grown with either of the single stresses. NO treatment effectively reduced EL, MDA and H2 O2 in plants grown under stress conditions applied singly or in combination. Salt stress alone and with ID reduced the superoxide dismutase (EC1.15.1.1) and catalase (EC 1.11.1.6) activities but increased that of POD (EC 1.17.1.7). Exogenously applied NO led to significant changes in antioxidant enzyme activities in either ID or S than those by ID+S. Overall, exogenously applied NO was more effective in mitigating the stress-induced adverse effects on the strawberry plants exposed to a single stress than those due to the combination of both stresses.
Collapse
Affiliation(s)
- Cengiz Kaya
- Soil Science and Plant Nutrition Department, Harran University, Sanliurfa, Turkey
| | - Nudrat A Akram
- Department of Botany, GC University Faisalabad, Faisalabad, Pakistan
| | | |
Collapse
|
16
|
Garnica M, Bacaicoa E, Mora V, San Francisco S, Baigorri R, Zamarreño AM, Garcia-Mina JM. Shoot iron status and auxin are involved in iron deficiency-induced phytosiderophores release in wheat. BMC PLANT BIOLOGY 2018; 18:105. [PMID: 29866051 PMCID: PMC5987636 DOI: 10.1186/s12870-018-1324-3] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/01/2017] [Accepted: 05/24/2018] [Indexed: 05/22/2023]
Abstract
BACKGROUND The release of phytosiderephores (PS) to the rhizosphere is the main root response to iron (Fe) deficiency in graminaceous plants. We have investigated the role of the Fe status in the shoot as well as of the signaling pathways controlled by three relevant phytoregulators - indolacetic acid (IAA), ethylene and nitric oxide (NO) - in the regulation of this root response in Fe-starved wheat plants. To this end, the PS accumulation in the nutrient solution and the root expression of the genes encoding the nicotianamine aminotransferase (TaNAAT) and ferritin (TaFER) have been evaluated in plants subjected to different treatments. RESULTS The application of Fe to leaves of Fe-deficient plants prevented the increase in both PS root release and TaNAAT gene expression thus showing the relevant role of the shoot to root communication in the regulation of PS root release and some steps of PS biosynthesis. Experiments with specific hormone inhibitors showed that while ethylene and NO did not positively regulate Fe-deficiency induced PS root release, auxin plays an essential role in the regulation of this process. Moreover, the application of IAA to Fe-sufficient plants promoted both PS root release and TaNAAT gene expression thus indicating that auxin might be involved in the shoot to root signaling network regulating Fe-deficiency root responses in wheat. CONCLUSIONS These results therefore indicate that PS root release in Fe-deficient wheat plants is directly modulated by the shoot Fe status through signaling pathways involving, among other possible effectors, auxin.
Collapse
Affiliation(s)
- Maria Garnica
- Department of Environmental Biology (BACh Group), School of Sciences, University of Navarra, Pamplona, Navarra Spain
| | - Eva Bacaicoa
- Department of Environmental Biology (BACh Group), School of Sciences, University of Navarra, Pamplona, Navarra Spain
| | - Veronica Mora
- Plant Physiology and Plant-Microorganism Laboratory, University of Rio Cuarto, Río Cuarto, Cordoba Argentina
| | - Sara San Francisco
- Technical and Development Department, Timac Agro Spain, Lodosa, Navarra Spain
| | - Roberto Baigorri
- Department of Environmental Biology (BACh Group), School of Sciences, University of Navarra, Pamplona, Navarra Spain
- Technical and Development Department, Timac Agro Spain, Lodosa, Navarra Spain
| | - Angel Mari Zamarreño
- Department of Environmental Biology (BACh Group), School of Sciences, University of Navarra, Pamplona, Navarra Spain
| | - Jose Maria Garcia-Mina
- Department of Environmental Biology (BACh Group), School of Sciences, University of Navarra, Pamplona, Navarra Spain
| |
Collapse
|
17
|
Huang J, Wei H, Li L, Yu S. Transcriptome analysis of nitric oxide-responsive genes in upland cotton (Gossypium hirsutum). PLoS One 2018; 13:e0192367. [PMID: 29513679 PMCID: PMC5841646 DOI: 10.1371/journal.pone.0192367] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/10/2017] [Accepted: 01/21/2018] [Indexed: 12/27/2022] Open
Abstract
Nitric oxide (NO) is an important signaling molecule with diverse physiological functions in plants. It is therefore important to characterize the downstream genes and signal transduction networks modulated by NO. Here, we identified 1,932 differentially expressed genes (DEGs) responding to NO in upland cotton using high throughput tag sequencing. The results of quantitative real-time polymerase chain reaction (qRT-PCR) analysis of 25 DEGs showed good consistency. Gene Ontology (GO) and KEGG pathway were analyzed to gain a better understanding of these DEGs. We identified 157 DEGs belonging to 36 transcription factor (TF) families and 72 DEGs related to eight plant hormones, among which several TF families and hormones were involved in stress responses. Hydrogen peroxide and malondialdehyde (MDA) contents were increased, as well related genes after treatment with sodium nitroprusside (SNP) (an NO donor), suggesting a role for NO in the plant stress response. Finally, we compared of the current and previous data indicating a massive number of NO-responsive genes at the large-scale transcriptome level. This study evaluated the landscape of NO-responsive genes in cotton and identified the involvement of NO in the stress response. Some of the identified DEGs represent good candidates for further functional analysis in cotton.
Collapse
Affiliation(s)
- Juan Huang
- Research Center of Buckwheat Industry Technology, Guizhou Normal University, Guiyang, Guizhou, P. R. China
- State Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang, Henan, P. R. China
| | - Hengling Wei
- State Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang, Henan, P. R. China
| | - Libei Li
- State Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang, Henan, P. R. China
| | - Shuxun Yu
- State Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang, Henan, P. R. China
| |
Collapse
|
18
|
Parveen S, Pandey A, Jameel N, Chakraborty S, Chakraborty N. Transcriptional regulation of chickpea ferritin CaFer1 influences its role in iron homeostasis and stress response. JOURNAL OF PLANT PHYSIOLOGY 2018; 222:9-16. [PMID: 29304382 DOI: 10.1016/j.jplph.2017.12.015] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/09/2017] [Revised: 12/21/2017] [Accepted: 12/22/2017] [Indexed: 06/07/2023]
Abstract
Ferritin, ubiquitous among all living organisms except yeast, exhibits iron-regulated expression. In plants, this regulation is applied through transcriptional control. Previous studies established the presence of two types of cis-acting elements in the promoter region: the iron regulatory element (FRE) in soybean and the iron-dependent regulatory sequence (IDRS) in maize and Arabidopsis. Adverse environmental conditions (e.g. water-deficit and oxidative stress) are known to modulate the expression of phytoferritin genes. In this study, we cloned and investigated the promoter sequence of a chickpea ferritin, designated CaFer1. Phylogenetic analysis of the CaFer1 promoter revealed its evolutionary relationship with other phytoferritins. The CaFer1 promoter exhibited several putative regulatory elements including two known transcription factor (TF) binding sites, Athb-1 and Myb.Ph. Electrophoretic mobility shift assay confirmed the sequence-specific binding of Athb-1 and Myb.Ph on the CaFer1 promoter. The TF-binding dynamics of CaFer1 showed high induction under conditions of iron-deficiency and water-deficit. We also demonstrated the possible interaction of CaFer1 with IRT1, a key component of the iron uptake system in plants, indicating its involvement in maintaining cellular iron levels. These results provide new insights into the underlying mechanisms of function of these interacting factors in CaFer1-mediated iron homeostasis and the stress response in plants.
Collapse
Affiliation(s)
- Shaista Parveen
- National Institute of Plant Genome Research, Aruna Asaf Ali Marg, New Delhi 110067, India
| | - Aarti Pandey
- National Institute of Plant Genome Research, Aruna Asaf Ali Marg, New Delhi 110067, India
| | - Neha Jameel
- National Institute of Plant Genome Research, Aruna Asaf Ali Marg, New Delhi 110067, India
| | - Subhra Chakraborty
- National Institute of Plant Genome Research, Aruna Asaf Ali Marg, New Delhi 110067, India
| | - Niranjan Chakraborty
- National Institute of Plant Genome Research, Aruna Asaf Ali Marg, New Delhi 110067, India.
| |
Collapse
|
19
|
Jain S, Muneer S, Guerriero G, Liu S, Vishwakarma K, Chauhan DK, Dubey NK, Tripathi DK, Sharma S. Tracing the role of plant proteins in the response to metal toxicity: a comprehensive review. PLANT SIGNALING & BEHAVIOR 2018; 13:e1507401. [PMID: 30188762 PMCID: PMC6204846 DOI: 10.1080/15592324.2018.1507401] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/14/2023]
Abstract
Plants are sessile in nature, but are capable to evade from high level concentration of heavy metals like Cd, Hg, Cu, through various metabolic pathways. Some of the pathways regulate normal metabolism in plants, whereas others are required for for their survival under metal toxicity. Different plant proteins act as transporters to transfer metal from one organelle to the other and further eliminate it out from the plants. Initially, exposure of heavy metals/metalloids to plants lead to over expression of proteins which in turn stimulate other stress-related genes. Further, they activate signalling mechanism like MAPK cascade, Cd-Calmodulin signalling pathway, and oxidation signalling pathway that lead to generation of ROS (reactive oxygen species). Once these ROS (highly unstable) are formed, they generate free radicals which react with macromolecules like proteins and DNA. This has negative impact on plant growth and leads to ageing and, eventually, cell death. The uncontrolled, destructive processes damage plants physiologically and ultimately lead to oxidative stress. Activation of antioxidant enzymes like SOD (superoxide dismutase) and CAT (catalase) allows plants to cope under oxidative stress conditions. Among plant proteins, some of the antioxidant enzymes like glutathione, and APX (ascorbate peroxidase) play defensive roles against abiotic stress in plants. Chaperones help in protein folding to maintain protein stability under stress conditions. With this background, the present review gives a brief account of the functions, localization and expression pattern of plant proteins against metal/metalloid toxicity. Moreover, the aim of this review is also to summarize the cutting edge research of plant protein and metal interfaces and their future prospects.
Collapse
Affiliation(s)
- Shruti Jain
- Department of Biotechnology, Motilal Nehru National Institute of Technology Allahabad, Allahabad, India
| | - Sowbiya Muneer
- Department of Horticulture, Gyeongsang National University, Jinju, Korea
- Department of Agriculture Engineering, Centre for Agricultural Innovations and Advanced Learning, Vellore Institute of Technology, Vellore, India
| | - Gea Guerriero
- Environmental Research and Innovation Department, Luxembourg Institute of Science and Technology, Esch/Alzette, Luxembourg
| | - Shiliang Liu
- College of Landscape Architecture, Sichuan Agricultural University, Chengdu, China
| | - Kanchan Vishwakarma
- Department of Biotechnology, Motilal Nehru National Institute of Technology Allahabad, Allahabad, India
| | - Devendra Kumar Chauhan
- D D Pant Interdisciplinary Research Laboratory, Department of Botany, University of Allahabad, Allahabad, India
| | - Nawal Kishore Dubey
- Centre of Advanced Study in Botany, Banaras Hindu University, Varanasi, India
| | - Durgesh Kumar Tripathi
- Department of Biotechnology, Motilal Nehru National Institute of Technology Allahabad, Allahabad, India
- Amity Institute of Organic Agriculture (AIOA), Amity University, Noida, Uttar Pradesh
- CONTACT Durgesh Kumar Tripathi ; Shivesh Sharma ; Department of Biotechnology, Motilal Nehru National Institute of Technology Allahabad, 211004 Allahabad, India
| | - Shivesh Sharma
- Department of Biotechnology, Motilal Nehru National Institute of Technology Allahabad, Allahabad, India
| |
Collapse
|
20
|
Yadav K, Patel P, Srivastava AK, Ganapathi TR. Overexpression of native ferritin gene MusaFer1 enhances iron content and oxidative stress tolerance in transgenic banana plants. PLoS One 2017; 12:e0188933. [PMID: 29190821 PMCID: PMC5708808 DOI: 10.1371/journal.pone.0188933] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/03/2017] [Accepted: 11/15/2017] [Indexed: 11/30/2022] Open
Abstract
Iron is an indispensable element for plant growth and defense and hence it is essential to improve the plant's ability to accumulate iron. Besides, it is also an important aspect for human health. In view of this, we attempted to increase the iron content in banana cultivar Rasthali using MusaFer1 as a candidate gene. Initially, the expression of all five genes of the MusaFer family (MusaFer1-5) was quantified under iron-excess and -deficient conditions. The supplementation of 250 and 350 μM iron enhanced expression of all MusaFer genes; however, MusaFer1 was increased maximally by 2- and 4- fold in leaves and roots respectively. Under iron deficient condition, all five MusaFer genes were downregulated, indicating their iron dependent regulation. In MusaFer1 overexpressing lines, iron content was increased by 2- and 3-fold in leaves and roots respectively, as compared with that of untransformed lines. The increased iron was mainly localized in the epidermal regions of petiole. The analysis of MusaFer1 promoter indicated that it might control the expression of iron metabolism related genes and also other genes of MusaFer family. MusaFer1 overexpression led to downregulated expression of MusaFer3, MusaFer4 and MusaFer5 in transgenic leaves which might be associated with the plant's compensatory mechanism in response to iron flux. Other iron metabolism genes like Ferric reductase (FRO), transporters (IRT, VIT and YSL) and chelators (NAS, DMAS and NAAT) were also differentially expressed in transgenic leaf and root, suggesting the multifaceted impact of MusaFer1 towards iron uptake and organ distribution. Additionally, MusaFer1 overexpression increased plant tolerance against methyl viologen and excess iron which was quantified in terms of photosynthetic efficiency and malondialdehyde content. Thus, the study not only broadens our understanding about iron metabolism but also highlights MusaFer1 as a suitable candidate gene for iron fortification in banana.
Collapse
Affiliation(s)
- Karuna Yadav
- Plant Cell Culture Technology Section, Nuclear Agriculture and Biotechnology Division, Bhabha Atomic Research Centre, Trombay, Mumbai, India
| | - Prashanti Patel
- Plant Cell Culture Technology Section, Nuclear Agriculture and Biotechnology Division, Bhabha Atomic Research Centre, Trombay, Mumbai, India
| | - Ashish Kumar Srivastava
- Plant Stress Physiology and Biotechnology Section, Nuclear Agriculture and Biotechnology Division, Bhabha Atomic Research Centre, Trombay, Mumbai, India
| | - T. R. Ganapathi
- Plant Cell Culture Technology Section, Nuclear Agriculture and Biotechnology Division, Bhabha Atomic Research Centre, Trombay, Mumbai, India
| |
Collapse
|
21
|
Singh AP, Dixit G, Kumar A, Mishra S, Kumar N, Dixit S, Singh PK, Dwivedi S, Trivedi PK, Pandey V, Dhankher OP, Norton GJ, Chakrabarty D, Tripathi RD. A protective role for nitric oxide and salicylic acid for arsenite phytotoxicity in rice (Oryza sativa L.). PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2017; 115:163-173. [PMID: 28371690 DOI: 10.1016/j.plaphy.2017.02.019] [Citation(s) in RCA: 58] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/02/2016] [Revised: 02/22/2017] [Accepted: 02/22/2017] [Indexed: 06/07/2023]
Abstract
Nitric oxide (NO) and salicylic acid (SA) are important signaling molecules in plant system. In the present study both NO and SA showed a protective role against arsenite (AsIII) stress in rice plants when supplied exogenously. The application of NO and SA alleviated the negative impact of AsIII on plant growth. Nitric oxide supplementation to AsIII treated plants greatly decreased arsenic (As) accumulation in the roots as well as shoots/roots translocation factor. Arsenite exposure in plants decreased the endogenous levels of NO and SA. Exogenous supplementation of SA not only enhanced endogenous level of SA but also the level of NO through enhanced nitrate reductase (NR) activity, whether AsIII was present or not. Exogenously supplied NO decreased the NR activity and level of endogenous NO. Arsenic accumulation was positively correlated with the expression level of OsLsi1, a transporter responsible for AsIII uptake. The endogenous level of NO and SA were positively correlated to each other either when AsIII was present or not. This close relationship indicates that NO and SA work in harmony to modulate the signaling response in AsIII stressed plants.
Collapse
Affiliation(s)
- Amit Pal Singh
- CSIR-National Botanical Research Institute, Rana Pratap Marg, Lucknow 226001, Uttar Pradesh, India; Institute of Biological and Environmental Sciences, University of Aberdeen, Cruickshank Building, St. Machar Drive, Aberdeen AB24 3UU, UK.
| | - Garima Dixit
- Department of Botany, Lucknow University, Lucknow 226 007, India; Institute of Biological and Environmental Sciences, University of Aberdeen, Cruickshank Building, St. Machar Drive, Aberdeen AB24 3UU, UK.
| | - Amit Kumar
- Department of Botany, Lucknow University, Lucknow 226 007, India; Institute of Biological and Environmental Sciences, University of Aberdeen, Cruickshank Building, St. Machar Drive, Aberdeen AB24 3UU, UK.
| | - Seema Mishra
- CSIR-National Botanical Research Institute, Rana Pratap Marg, Lucknow 226001, Uttar Pradesh, India; Institute of Biological and Environmental Sciences, University of Aberdeen, Cruickshank Building, St. Machar Drive, Aberdeen AB24 3UU, UK.
| | - Navin Kumar
- CSIR-National Botanical Research Institute, Rana Pratap Marg, Lucknow 226001, Uttar Pradesh, India; Institute of Biological and Environmental Sciences, University of Aberdeen, Cruickshank Building, St. Machar Drive, Aberdeen AB24 3UU, UK.
| | - Sameer Dixit
- CSIR-National Botanical Research Institute, Rana Pratap Marg, Lucknow 226001, Uttar Pradesh, India; Institute of Biological and Environmental Sciences, University of Aberdeen, Cruickshank Building, St. Machar Drive, Aberdeen AB24 3UU, UK.
| | - Pradyumna Kumar Singh
- CSIR-National Botanical Research Institute, Rana Pratap Marg, Lucknow 226001, Uttar Pradesh, India; Institute of Biological and Environmental Sciences, University of Aberdeen, Cruickshank Building, St. Machar Drive, Aberdeen AB24 3UU, UK.
| | - Sanjay Dwivedi
- CSIR-National Botanical Research Institute, Rana Pratap Marg, Lucknow 226001, Uttar Pradesh, India; Institute of Biological and Environmental Sciences, University of Aberdeen, Cruickshank Building, St. Machar Drive, Aberdeen AB24 3UU, UK.
| | - Prabodh Kumar Trivedi
- CSIR-National Botanical Research Institute, Rana Pratap Marg, Lucknow 226001, Uttar Pradesh, India; Institute of Biological and Environmental Sciences, University of Aberdeen, Cruickshank Building, St. Machar Drive, Aberdeen AB24 3UU, UK.
| | - Vivek Pandey
- CSIR-National Botanical Research Institute, Rana Pratap Marg, Lucknow 226001, Uttar Pradesh, India; Institute of Biological and Environmental Sciences, University of Aberdeen, Cruickshank Building, St. Machar Drive, Aberdeen AB24 3UU, UK.
| | - Om Prakash Dhankher
- Department of Botany, Lucknow University, Lucknow 226 007, India; Institute of Biological and Environmental Sciences, University of Aberdeen, Cruickshank Building, St. Machar Drive, Aberdeen AB24 3UU, UK.
| | - Gareth J Norton
- Stockbridge School of Agriculture, University of Massachusetts, Amherst, MA 01003-9320, USA; Institute of Biological and Environmental Sciences, University of Aberdeen, Cruickshank Building, St. Machar Drive, Aberdeen AB24 3UU, UK.
| | - Debasis Chakrabarty
- CSIR-National Botanical Research Institute, Rana Pratap Marg, Lucknow 226001, Uttar Pradesh, India; Institute of Biological and Environmental Sciences, University of Aberdeen, Cruickshank Building, St. Machar Drive, Aberdeen AB24 3UU, UK.
| | - Rudra Deo Tripathi
- CSIR-National Botanical Research Institute, Rana Pratap Marg, Lucknow 226001, Uttar Pradesh, India; Institute of Biological and Environmental Sciences, University of Aberdeen, Cruickshank Building, St. Machar Drive, Aberdeen AB24 3UU, UK.
| |
Collapse
|
22
|
González PM, Puntarulo S. Fe, oxidative and nitrosative metabolism in the Antarctic limpet Nacella concinna. Comp Biochem Physiol A Mol Integr Physiol 2016; 200:56-63. [DOI: 10.1016/j.cbpa.2016.04.007] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/19/2015] [Revised: 03/21/2016] [Accepted: 04/09/2016] [Indexed: 01/17/2023]
|
23
|
Vigani G, Bashir K, Ishimaru Y, Lehmann M, Casiraghi FM, Nakanishi H, Seki M, Geigenberger P, Zocchi G, Nishizawa NK. Knocking down mitochondrial iron transporter (MIT) reprograms primary and secondary metabolism in rice plants. JOURNAL OF EXPERIMENTAL BOTANY 2016; 67:1357-68. [PMID: 26685186 PMCID: PMC4762380 DOI: 10.1093/jxb/erv531] [Citation(s) in RCA: 28] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/04/2023]
Abstract
Iron (Fe) is an essential micronutrient for plant growth and development, and its reduced bioavailability strongly impairs mitochondrial functionality. In this work, the metabolic adjustment in the rice (Oryza sativa) mitochondrial Fe transporter knockdown mutant (mit-2) was analysed. Biochemical characterization of purified mitochondria from rice roots showed alteration in the respiratory chain of mit-2 compared with wild-type (WT) plants. In particular, proteins belonging to the type II alternative NAD(P)H dehydrogenases accumulated strongly in mit-2 plants, indicating that alternative pathways were activated to keep the respiratory chain working. Additionally, large-scale changes in the transcriptome and metabolome were observed in mit-2 rice plants. In particular, a strong alteration (up-/down-regulation) in the expression of genes encoding enzymes of both primary and secondary metabolism was found in mutant plants. This was reflected by changes in the metabolic profiles in both roots and shoots of mit-2 plants. Significant alterations in the levels of amino acids belonging to the aspartic acid-related pathways (aspartic acid, lysine, and threonine in roots, and aspartic acid and ornithine in shoots) were found that are strictly connected to the Krebs cycle. Furthermore, some metabolites (e.g. pyruvic acid, fumaric acid, ornithine, and oligosaccharides of the raffinose family) accumulated only in the shoot of mit-2 plants, indicating possible hypoxic responses. These findings suggest that the induction of local Fe deficiency in the mitochondrial compartment of mit-2 plants differentially affects the transcript as well as the metabolic profiles in root and shoot tissues.
Collapse
Affiliation(s)
- Gianpiero Vigani
- Dipartimento di Scienze Agrarie e Ambientali-Produzione, Territorio, Agroenergia, Università degli Studi di Milano, via Celoria 2-20133 Milano, Italy
| | - Khurram Bashir
- RIKEN Center for Sustainable Resource Science, 1-7-22 Suehiro-cho, Tsurumi-ku, , Yokohama, Kanagawa 230-0045, Japan
| | - Yasuhiro Ishimaru
- Graduate School of Science, Tohoku University, 6-3, Aramaki-aza Aoba, Aoba-ku, Sendai 980-8578, Japan
| | - Martin Lehmann
- Plant Molecular Biology (Botany) and Plant Metabolism, Department Biology I, Ludwig-Maximilians-Universität München (LMU), Großhaderner Straße 2, D-82152 Planegg-Martinsried, Germany
| | - Fabio Marco Casiraghi
- Dipartimento di Scienze Agrarie e Ambientali-Produzione, Territorio, Agroenergia, Università degli Studi di Milano, via Celoria 2-20133 Milano, Italy
| | - Hiromi Nakanishi
- Department of Global Agricultural Sciences, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, Japan
| | - Motoaki Seki
- RIKEN Center for Sustainable Resource Science, 1-7-22 Suehiro-cho, Tsurumi-ku, , Yokohama, Kanagawa 230-0045, Japan CREST, JST, 4-1-8 Honcho, Kawaguchi, Saitama 332-0012, Japan
| | - Peter Geigenberger
- Plant Molecular Biology (Botany) and Plant Metabolism, Department Biology I, Ludwig-Maximilians-Universität München (LMU), Großhaderner Straße 2, D-82152 Planegg-Martinsried, Germany
| | - Graziano Zocchi
- Dipartimento di Scienze Agrarie e Ambientali-Produzione, Territorio, Agroenergia, Università degli Studi di Milano, via Celoria 2-20133 Milano, Italy
| | - Naoko K Nishizawa
- Department of Global Agricultural Sciences, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, Japan Research Institute for Bioresources and Biotechnology, Ishikawa Prefectural University, 1-308 Suematsu, Nonoichi-shi, Ishikawa 921-8836, Japan
| |
Collapse
|
24
|
Singh AP, Dixit G, Kumar A, Mishra S, Singh PK, Dwivedi S, Trivedi PK, Chakrabarty D, Mallick S, Pandey V, Dhankher OP, Tripathi RD. Nitric Oxide Alleviated Arsenic Toxicity by Modulation of Antioxidants and Thiol Metabolism in Rice (Oryza sativa L.). FRONTIERS IN PLANT SCIENCE 2016; 6:1272. [PMID: 26793232 PMCID: PMC4709823 DOI: 10.3389/fpls.2015.01272] [Citation(s) in RCA: 62] [Impact Index Per Article: 7.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/15/2015] [Accepted: 12/28/2015] [Indexed: 05/18/2023]
Abstract
Nitric oxide (NO) is a gaseous signaling molecule and has a profound impact on plant growth and development. It is reported to serve as pro oxidant as well as antioxidant in plant system. In the present study, we evaluated the protective role of NO against arsenate (As(V)) toxicity in rice plants. As(V) exposure has hampered the plant growth, reduced the chlorophyll content, and enhanced the oxidative stress, while the exogenous NO supplementation has reverted these symptoms. NO supplementation has reduced the arsenic (As) accumulation in root as well as shoot. NO supplementation to As(V) exposed plants has reduced the gene expression level of OsLsi1 and OsLsi2. As(V) stress significantly impacted thiol metabolism, it reduced GSH content and GSH/GSSG ratio, and enhanced the level of PCs. NO supplementation maintained the GSH/GSSG ratio and reduced the level of PCs. NO supplementation reverted As(V) induced iron deficiency in shoot and had significant impact of gene expression level of various iron transporters (OsYSL2, OsFRDL1, OsIRT1, and OsIRO2). Conclusively, exogenous application of NO could be advantageous against As(V) toxicity and could confer the tolerance to As(V) stress in rice.
Collapse
Affiliation(s)
- Amit P. Singh
- C.S.I.R.-National Botanical Research InstituteLucknow, India
| | - Garima Dixit
- C.S.I.R.-National Botanical Research InstituteLucknow, India
| | - Amit Kumar
- C.S.I.R.-National Botanical Research InstituteLucknow, India
| | - Seema Mishra
- C.S.I.R.-National Botanical Research InstituteLucknow, India
| | | | - Sanjay Dwivedi
- C.S.I.R.-National Botanical Research InstituteLucknow, India
| | | | | | - Shekhar Mallick
- C.S.I.R.-National Botanical Research InstituteLucknow, India
| | - Vivek Pandey
- C.S.I.R.-National Botanical Research InstituteLucknow, India
| | - Om P. Dhankher
- Stockbridge School of Agriculture, University of Massachusetts AmherstAmherst, MA, USA
| | | |
Collapse
|
25
|
Hu W, Chen L, Qiu X, Lu H, Wei J, Bai Y, He N, Hu R, Sun L, Zhang H, Shen G. Morphological, Physiological and Proteomic Analyses Provide Insights into the Improvement of Castor Bean Productivity of a Dwarf Variety in Comparing with a High-Stalk Variety. FRONTIERS IN PLANT SCIENCE 2016; 7:1473. [PMID: 27746800 PMCID: PMC5040714 DOI: 10.3389/fpls.2016.01473] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/05/2016] [Accepted: 09/15/2016] [Indexed: 05/16/2023]
Abstract
Ricinus communis displays a broad range of phenotypic diversity in size, with dwarf, common, and large-sized varieties. To better understand the differences in plant productivity between a high-stalk variety and a dwarf variety under normal growth conditions, we carried out a comparative proteomic study between Zhebi 100 (a high stalk variety) and Zhebi 26 (a dwarf variety) combined with agronomic and physiological analyses. Over 1000 proteins were detected, 38 of which differed significantly between the two varieties and were identified by mass spectrometry. Compared with Zhebi 100, we found that photosynthesis, energy, and protein biosynthesis related proteins decreased in abundance in Zhebi 26. The lower yield of the dwarf castor is likely related to its lower photosynthetic rate, therefore we hypothesize that the lower yield of the dwarf castor, in comparing to high stalk castor, could be increased by increasing planting density. Consequently, we demonstrated that at the higher planting density in Zhebi 26 (36,000 seedlings/hm2) can achieve a higher yield than that of Zhebi 100 (12,000 seedlings/hm2). Proteomic and physiological studies showed that for developing dwarf R. communis cultivar that is suitable for large scale-production (i.e., mechanical harvesting), it is imperative to identify the optimum planting density that will contribute to higher leaf area index, higher photosynthesis, and eventually higher productivity.
Collapse
Affiliation(s)
- Wenjun Hu
- Zhejiang Academy of Agricultural SciencesHangzhou, China
| | - Lin Chen
- Zhejiang Academy of Agricultural SciencesHangzhou, China
| | - Xiaoyun Qiu
- Zhejiang Academy of Agricultural SciencesHangzhou, China
| | - Hongling Lu
- Zhejiang Academy of Agricultural SciencesHangzhou, China
| | - Jia Wei
- Zhejiang Academy of Agricultural SciencesHangzhou, China
| | - Yueqing Bai
- Zhejiang Academy of Agricultural SciencesHangzhou, China
| | - Ningjia He
- State Key Laboratory of Silkworm Genome Biology, Southwest UniversityChongqing, China
| | - Rongbin Hu
- Department of Biological Sciences, Texas Tech UniversityLubbock, TX, USA
| | - Li Sun
- Department of Biological Sciences, Texas Tech UniversityLubbock, TX, USA
| | - Hong Zhang
- Department of Biological Sciences, Texas Tech UniversityLubbock, TX, USA
| | - Guoxin Shen
- Zhejiang Academy of Agricultural SciencesHangzhou, China
- *Correspondence: Guoxin Shen
| |
Collapse
|
26
|
Chen J, Wu FH, Shang YT, Wang WH, Hu WJ, Simon M, Liu X, Shangguan ZP, Zheng HL. Hydrogen sulphide improves adaptation of Zea mays seedlings to iron deficiency. JOURNAL OF EXPERIMENTAL BOTANY 2015; 66:6605-22. [PMID: 26208645 PMCID: PMC4623679 DOI: 10.1093/jxb/erv368] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/03/2023]
Abstract
Hydrogen sulphide (H2S) is emerging as a potential molecule involved in physiological regulation in plants. However, whether H2S regulates iron-shortage responses in plants is largely unknown. Here, the role of H2S in modulating iron availability in maize (Zea mays L. cv Canner) seedlings grown in iron-deficient culture solution is reported. The main results are as follows: Firstly, NaHS, a donor of H2S, completely prevented leaf interveinal chlorosis in maize seedlings grown in iron-deficient culture solution. Secondly, electron micrographs of mesophyll cells from iron-deficient maize seedlings revealed plastids with few photosynthetic lamellae and rudimentary grana. On the contrary, mesophyll chloroplasts appeared completely developed in H2S-treated maize seedlings. Thirdly, H2S treatment increased iron accumulation in maize seedlings by changing the expression levels of iron homeostasis- and sulphur metabolism-related genes. Fourthly, phytosiderophore (PS) accumulation and secretion were enhanced by H2S treatment in seedlings grown in iron-deficient solution. Indeed, the gene expression of ferric-phytosiderophore transporter (ZmYS1) was specifically induced by iron deficiency in maize leaves and roots, whereas their abundance was decreased by NaHS treatment. Lastly, H2S significantly enhanced photosynthesis through promoting the protein expression of ribulose-1,5-bisphosphate carboxylase large subunit (RuBISCO LSU) and phosphoenolpyruvate carboxylase (PEPC) and the expression of genes encoding RuBISCO large subunit (RBCL), small subunit (RBCS), D1 protein (psbA), and PEPC in maize seedlings grown in iron-deficient solution. These results indicate that H2S is closely related to iron uptake, transport, and accumulation, and consequently increases chlorophyll biosynthesis, chloroplast development, and photosynthesis in plants.
Collapse
Affiliation(s)
- Juan Chen
- State Key Laboratory of Soil Erosion and Dryland Farming on the Loess Plateau, Northwest A&F University, Yangling, Shaanxi 712100, P.R. China. Key Laboratory of the Ministry of Education for Coastal and Wetland Ecosystem, College of the Environment and Ecology, Xiamen University, Xiamen, Fujian 361005, P.R. China
| | - Fei-Hua Wu
- Key Laboratory of the Ministry of Education for Coastal and Wetland Ecosystem, College of the Environment and Ecology, Xiamen University, Xiamen, Fujian 361005, P.R. China. College of Life and Environmental Sciences, Hangzhou Normal University, Hangzhou, Zhejiang 310036, P.R. China
| | - Yu-Ting Shang
- State Key Laboratory of Soil Erosion and Dryland Farming on the Loess Plateau, Northwest A&F University, Yangling, Shaanxi 712100, P.R. China
| | - Wen-Hua Wang
- Key Laboratory of the Ministry of Education for Coastal and Wetland Ecosystem, College of the Environment and Ecology, Xiamen University, Xiamen, Fujian 361005, P.R. China
| | - Wen-Jun Hu
- Key Laboratory of the Ministry of Education for Coastal and Wetland Ecosystem, College of the Environment and Ecology, Xiamen University, Xiamen, Fujian 361005, P.R. China
| | - Martin Simon
- Key Laboratory of the Ministry of Education for Coastal and Wetland Ecosystem, College of the Environment and Ecology, Xiamen University, Xiamen, Fujian 361005, P.R. China
| | - Xiang Liu
- Key Laboratory of the Ministry of Education for Coastal and Wetland Ecosystem, College of the Environment and Ecology, Xiamen University, Xiamen, Fujian 361005, P.R. China
| | - Zhou-Ping Shangguan
- State Key Laboratory of Soil Erosion and Dryland Farming on the Loess Plateau, Northwest A&F University, Yangling, Shaanxi 712100, P.R. China
| | - Hai-Lei Zheng
- Key Laboratory of the Ministry of Education for Coastal and Wetland Ecosystem, College of the Environment and Ecology, Xiamen University, Xiamen, Fujian 361005, P.R. China.
| |
Collapse
|
27
|
Aznar A, Chen NWG, Thomine S, Dellagi A. Immunity to plant pathogens and iron homeostasis. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2015; 240:90-7. [PMID: 26475190 DOI: 10.1016/j.plantsci.2015.08.022] [Citation(s) in RCA: 38] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/31/2015] [Revised: 08/27/2015] [Accepted: 08/28/2015] [Indexed: 05/07/2023]
Abstract
Iron is essential for metabolic processes in most living organisms. Pathogens and their hosts often compete for the acquisition of this nutrient. However, iron can catalyze the formation of deleterious reactive oxygen species. Hosts may use iron to increase local oxidative stress in defense responses against pathogens. Due to this duality, iron plays a complex role in plant-pathogen interactions. Plant defenses against pathogens and plant response to iron deficiency share several features, such as secretion of phenolic compounds, and use common hormone signaling pathways. Moreover, fine tuning of iron localization during infection involves genes coding iron transport and iron storage proteins, which have been shown to contribute to immunity. The influence of the plant iron status on the outcome of a given pathogen attack is strongly dependent on the nature of the pathogen infection strategy and on the host species. Microbial siderophores emerged as important factors as they have the ability to trigger plant defense responses. Depending on the plant species, siderophore perception can be mediated by their strong iron scavenging capacity or possibly via specific recognition as pathogen associated molecular patterns. This review highlights that iron has a key role in several plant-pathogen interactions by modulating immunity.
Collapse
Affiliation(s)
- Aude Aznar
- Institut Jean-Pierre Bourgin, UMR INRA-AgroParisTech 1318, ERL CNRS 3559, Saclay Plant Sciences, RD10, F-78026 Versailles, France
| | - Nicolas W G Chen
- Institut de Recherche en Horticulture et Semences, UMR1345 INRA-AgroCampus-Ouest, F-49045 Angers, France
| | - Sebastien Thomine
- Institute for Integrative Biology of the Cell (I2BC), CNRS, Gif-sur-Yvette 91198, France
| | - Alia Dellagi
- Institut Jean-Pierre Bourgin, UMR INRA-AgroParisTech 1318, ERL CNRS 3559, Saclay Plant Sciences, RD10, F-78026 Versailles, France.
| |
Collapse
|
28
|
Murgia I, Vigani G. Analysis of Arabidopsis thaliana atfer4-1, atfh and atfer4-1/atfh mutants uncovers frataxin and ferritin contributions to leaf ionome homeostasis. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2015; 94:65-72. [PMID: 26042547 DOI: 10.1016/j.plaphy.2015.05.011] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/24/2015] [Revised: 05/22/2015] [Accepted: 05/22/2015] [Indexed: 05/09/2023]
Abstract
Ferritins are iron-storage proteins involved in the environmental and developmental control of the free iron pool within cells. Plant ferritins are targeted to mitochondria as well as to chloroplasts. AtFer4 is the Arabidopsis thaliana ferritin isoform that can be also targeted to mitochondria. Frataxin is a mitochondrial protein whose role is essential for plants; lack of AtFH frataxin causes early embryo-lethality in Arabidopsis. Because of that, the Arabidopsis atfh KO mutant is propagated in heterozygosis. For exploring the functional interaction between frataxin and ferritin, Arabidopsis double mutant atfer4-1/atfh was isolated and its physiological parameters were measured, as well as its ionome profile, together with those of both atfer4 and atfh single mutants, in different conditions of Fe supply. Impairment of both ferritin and frataxin did not lead to any effect on mitochondrial respiration. However, ionomics revealed that the content of macro- and microelements, occurring when the nutritional Fe supply changes, were altered in the mutants analysed. These results suggest that both ferritin and frataxin can contribute to the composition of the leaf ionome and also confirm ionomics as an excellent tool for detecting alterations in the plant's physiology.
Collapse
Affiliation(s)
| | - Gianpiero Vigani
- Dept. Agricultural and Environmental Sciences - Production, Landscape, Agroenergy, University of Milano, Italy
| |
Collapse
|
29
|
Reyt G, Boudouf S, Boucherez J, Gaymard F, Briat JF. Iron- and ferritin-dependent reactive oxygen species distribution: impact on Arabidopsis root system architecture. MOLECULAR PLANT 2015; 8:439-53. [PMID: 25624148 DOI: 10.1016/j.molp.2014.11.014] [Citation(s) in RCA: 79] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/03/2014] [Revised: 10/20/2014] [Accepted: 11/02/2014] [Indexed: 05/08/2023]
Abstract
Iron (Fe) homeostasis is integrated with the production of reactive oxygen species (ROS), and distribution at the root tip participates in the control of root growth. Excess Fe increases ferritin abundance, enabling the storage of Fe, which contributes to protection of plants against Fe-induced oxidative stress. AtFer1 and AtFer3 are the two ferritin genes expressed in the meristematic zone, pericycle and endodermis of the Arabidopsis thaliana root, and it is in these regions that we observe Fe stained dots. This staining disappears in the triple fer1-3-4 ferritin mutant. Fe excess decreases primary root length in the same way in wild-type and in fer1-3-4 mutant. In contrast, the Fe-mediated decrease of lateral root (LR) length and density is enhanced in fer1-3-4 plants due to a defect in LR emergence. We observe that this interaction between excess Fe, ferritin, and root system architecture (RSA) is in part mediated by the H2O2/O2·- balance between the root cell proliferation and differentiation zones regulated by the UPB1 transcription factor. Meristem size is also decreased in response to Fe excess in ferritin mutant plants, implicating cell cycle arrest mediated by the ROS-activated SMR5/SMR7 cyclin-dependent kinase inhibitors pathway in the interaction between Fe and RSA.
Collapse
Affiliation(s)
- Guilhem Reyt
- Biochimie et Physiologie Moléculaire des Plantes, Centre National de la Recherche Scientifique, Institut National de la Recherche Agronomique, Université Montpellier 2, SupAgro. Bat 7, 2 place Viala, 34060 Montpellier Cedex 1, France
| | - Soukaina Boudouf
- Biochimie et Physiologie Moléculaire des Plantes, Centre National de la Recherche Scientifique, Institut National de la Recherche Agronomique, Université Montpellier 2, SupAgro. Bat 7, 2 place Viala, 34060 Montpellier Cedex 1, France
| | - Jossia Boucherez
- Biochimie et Physiologie Moléculaire des Plantes, Centre National de la Recherche Scientifique, Institut National de la Recherche Agronomique, Université Montpellier 2, SupAgro. Bat 7, 2 place Viala, 34060 Montpellier Cedex 1, France
| | - Frédéric Gaymard
- Biochimie et Physiologie Moléculaire des Plantes, Centre National de la Recherche Scientifique, Institut National de la Recherche Agronomique, Université Montpellier 2, SupAgro. Bat 7, 2 place Viala, 34060 Montpellier Cedex 1, France
| | - Jean-Francois Briat
- Biochimie et Physiologie Moléculaire des Plantes, Centre National de la Recherche Scientifique, Institut National de la Recherche Agronomique, Université Montpellier 2, SupAgro. Bat 7, 2 place Viala, 34060 Montpellier Cedex 1, France.
| |
Collapse
|
30
|
Affiliation(s)
- Agustina Buet
- Instituto de Fisiología Vegetal (INFIVE); Universidad Nacional de La Plata (UNLP) and Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET); Buenos Aires Argentina
| | - Marcela Simontacchi
- Instituto de Fisiología Vegetal (INFIVE); Universidad Nacional de La Plata (UNLP) and Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET); Buenos Aires Argentina
| |
Collapse
|
31
|
Araki R, Kousaka K, Namba K, Murata Y, Murata J. 2'-Deoxymugineic acid promotes growth of rice (Oryza sativa L.) by orchestrating iron and nitrate uptake processes under high pH conditions. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2015; 81:233-46. [PMID: 25393516 PMCID: PMC4309410 DOI: 10.1111/tpj.12722] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/10/2014] [Revised: 10/24/2014] [Accepted: 11/03/2014] [Indexed: 05/20/2023]
Abstract
Poaceae plants release 2'-deoxymugineic acid (DMA) and related phytosiderophores to chelate iron (Fe), which often exists as insoluble Fe(III) in the rhizosphere, especially under high pH conditions. Although the molecular mechanisms behind the biosynthesis and secretion of DMA have been studied extensively, little information is known about whether DMA has biological roles other than chelating Fe in vivo. Here, we demonstrate that hydroponic cultures of rice (Oryza sativa) seedlings show almost complete restoration in shoot height and soil-plant analysis development (SPAD) values after treatment with 3-30 μm DMA at high pH (pH 8.0), compared with untreated control seedlings at normal pH (pH 5.8). These changes were accompanied by selective accumulation of Fe over other metals. While this enhanced growth was evident under high pH conditions, DMA application also enhanced seedling growth under normal pH conditions in which Fe was fairly accessible. Microarray and qRT-PCR analyses revealed that exogenous DMA application attenuated the increased expression levels of various genes related to Fe transport and accumulation. Surprisingly, despite the preferential utilization of ammonium over nitrate as a nitrogen source by rice, DMA application also increased nitrate reductase activity and the expression of genes encoding high-affinity nitrate transporters and nitrate reductases, all of which were otherwise considerably lower under high pH conditions. These data suggest that exogenous DMA not only plays an important role in facilitating the uptake of environmental Fe, but also orchestrates Fe and nitrate assimilation for optimal growth under high pH conditions.
Collapse
Affiliation(s)
- Ryoichi Araki
- Division of Integrative Biomolecular Function, Bioorganic Research Institute, Suntory Foundation for Life Sciences1-1-1 Wakayamadai, Shimamoto, Mishima, Osaka, 618-8503, Japan
| | - Kayoko Kousaka
- Division of Integrative Biomolecular Function, Bioorganic Research Institute, Suntory Foundation for Life Sciences1-1-1 Wakayamadai, Shimamoto, Mishima, Osaka, 618-8503, Japan
| | - Kosuke Namba
- Department of Chemistry, Graduate School of Science, Hokkaido UniversityKita-ku, Sapporo, 060-0810, Japan
| | - Yoshiko Murata
- Division of Integrative Biomolecular Function, Bioorganic Research Institute, Suntory Foundation for Life Sciences1-1-1 Wakayamadai, Shimamoto, Mishima, Osaka, 618-8503, Japan
| | - Jun Murata
- Division of Integrative Biomolecular Function, Bioorganic Research Institute, Suntory Foundation for Life Sciences1-1-1 Wakayamadai, Shimamoto, Mishima, Osaka, 618-8503, Japan
- *For correspondence (e-mail )
| |
Collapse
|
32
|
Pirdel L, Pirdel M. Role of iron overload-induced macrophage apoptosis in the pathogenesis of peritoneal endometriosis. Reproduction 2014; 147:R199-207. [PMID: 24599836 DOI: 10.1530/rep-13-0552] [Citation(s) in RCA: 32] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
Abstract
This article presents an overview of the involvement of iron overload-induced nitric oxide (NO) overproduction in apoptosis of peritoneal macrophages of women with endometriosis. We have postulated that the peritoneal iron overload originated from retrograde menstruation or bleeding lesions in the ectopic endometrium, which may contribute to the development of endometriosis by a wide range of mechanisms, including oxidative damage and chronic inflammation. Excessive NO production may also be associated with impaired clearance of endometrial cells by macrophages, which promotes cell growth in the peritoneal cavity. Therefore, further research of the mechanisms and consequences of macrophage apoptosis in endometriosis helps discover novel therapeutic strategies that are designed to prevent progression of endometriosis.
Collapse
Affiliation(s)
- Leila Pirdel
- Department of ImmunologyFaculty of Medicine, Islamic Azad University, Ardabil Branch, Ardabil 5615731567, IranDepartment of MidwiferyIslamic Azad University, Astara Branch, Astara, Iran
| | - Manijeh Pirdel
- Department of ImmunologyFaculty of Medicine, Islamic Azad University, Ardabil Branch, Ardabil 5615731567, IranDepartment of MidwiferyIslamic Azad University, Astara Branch, Astara, Iran
| |
Collapse
|
33
|
Abstract
SIGNIFICANCE Photosynthesis, the process that drives life on earth, relies on transition metal (e.g., Fe and Cu) containing proteins that participate in electron transfer in the chloroplast. However, the light reactions also generate high levels of reactive oxygen species (ROS), which makes metal use in plants a challenge. RECENT ADVANCES Sophisticated regulatory networks govern Fe and Cu homeostasis in response to metal ion availability according to cellular needs and priorities. Molecular remodeling in response to Fe or Cu limitation leads to its economy to benefit photosynthesis. Fe toxicity is prevented by ferritin, a chloroplastic Fe-storage protein in plants. Recent studies on ferritin function and regulation revealed the interplay between iron homeostasis and the redox balance in the chloroplast. CRITICAL ISSUES Although the connections between metal excess and ROS in the chloroplast are established at the molecular level, the mechanistic details and physiological significance remain to be defined. The causality/effect relationship between transition metals, redox signals, and responses is difficult to establish. FUTURE DIRECTIONS Integrated approaches have led to a comprehensive understanding of Cu homeostasis in plants. However, the biological functions of several major families of Cu proteins remain unclear. The cellular priorities for Fe use under deficiency remain largely to be determined. A number of transcription factors that function to regulate Cu and Fe homeostasis under deficiency have been characterized, but we have not identified regulators that mediate responses to excess. Importantly, details of metal sensing mechanisms and cross talk to ROS-sensing mechanisms are so far poorly documented in plants.
Collapse
Affiliation(s)
- Karl Ravet
- Biology Department, Colorado State University, Fort Collins, CO 80523, USA.
| | | |
Collapse
|
34
|
Jain A, Connolly EL. Mitochondrial iron transport and homeostasis in plants. FRONTIERS IN PLANT SCIENCE 2013; 4:348. [PMID: 24046773 PMCID: PMC3764374 DOI: 10.3389/fpls.2013.00348] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/05/2013] [Accepted: 08/18/2013] [Indexed: 05/20/2023]
Abstract
Iron (Fe) is an essential nutrient for plants and although the mechanisms controlling iron uptake from the soil are relatively well understood, comparatively little is known about subcellular trafficking of iron in plant cells. Mitochondria represent a significant iron sink within cells, as iron is required for the proper functioning of respiratory chain protein complexes. Mitochondria are a site of Fe-S cluster synthesis, and possibly heme synthesis as well. Here we review recent insights into the molecular mechanisms controlling mitochondrial iron transport and homeostasis. We focus on the recent identification of a mitochondrial iron uptake transporter in rice and a possible role for metalloreductases in iron uptake by mitochondria. In addition, we highlight recent advances in mitochondrial iron homeostasis with an emphasis on the roles of frataxin and ferritin in iron trafficking and storage within mitochondria.
Collapse
Affiliation(s)
| | - Erin L. Connolly
- *Correspondence: Erin L. Connolly, University of South Carolina, 715 Sumter Street, Columbia, SC 29208, USA e-mail:
| |
Collapse
|
35
|
Vigani G, Tarantino D, Murgia I. Mitochondrial ferritin is a functional iron-storage protein in cucumber (Cucumis sativus) roots. FRONTIERS IN PLANT SCIENCE 2013; 4:316. [PMID: 23967005 PMCID: PMC3744851 DOI: 10.3389/fpls.2013.00316] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/23/2013] [Accepted: 07/28/2013] [Indexed: 05/23/2023]
Abstract
In plants, intracellular Fe trafficking must satisfy chloroplasts' and mitochondrial demands for Fe without allowing its accumulation in the organelles in dangerous redox-active forms. Protein ferritin is involved in such homeostatic control, however its functional role in mitochondria, differently from its role in chloroplasts, is still matter of debate. To test ferritin functionality as a 24-mer Fe-storage complex in mitochondria, cucumber seedlings were grown under different conditions of Fe supply (excess, control, deficiency) and mitochondria were purified from the roots. A ferritin monomer of around 25 KDa was detected by SDS-PAGE in Fe-excess root mitochondria, corresponding to the annotated Csa5M215130/XP_004163524 protein: such a monomer is barely detectable in the control mitochondria and not at all in the Fe-deficient ones. Correspondingly, the ferritin 24-mer complex is abundant in root mitochondria from Fe-excess plants and it stores Fe as Fe(III): such a complex is also detectable, though to a much smaller extent, in control mitochondria, but not in Fe-deficient ones. Cucumber ferritin Csa5M215130/XP_004163524 is therefore a functional Fe(III)-store in root mitochondria and its abundance is dependent on the Fe nutritional status of the plant.
Collapse
Affiliation(s)
- Gianpiero Vigani
- Dipartimento di Scienze Agrarie e Ambientali – Produzione, Territorio, Agroenergia, Università degli Studi di MilanoMilano, Italy
| | - Delia Tarantino
- Dipartimento di Bioscienze, Università degli Studi di MilanoMilano, Italy
| | - Irene Murgia
- Dipartimento di Bioscienze, Università degli Studi di MilanoMilano, Italy
| |
Collapse
|
36
|
Simontacchi M, García-Mata C, Bartoli CG, Santa-María GE, Lamattina L. Nitric oxide as a key component in hormone-regulated processes. PLANT CELL REPORTS 2013; 32:853-66. [PMID: 23584547 DOI: 10.1007/s00299-013-1434-1] [Citation(s) in RCA: 64] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/29/2012] [Revised: 03/21/2013] [Accepted: 03/21/2013] [Indexed: 05/18/2023]
Abstract
Nitric oxide (NO) is a small gaseous molecule, with a free radical nature that allows it to participate in a wide spectrum of biologically important reactions. NO is an endogenous product in plants, where different biosynthetic pathways have been proposed. First known in animals as a signaling molecule in cardiovascular and nervous systems, it has turned up to be an essential component for a wide variety of hormone-regulated processes in plants. Adaptation of plants to a changing environment involves a panoply of processes, which include the control of CO2 fixation and water loss through stomatal closure, rearrangements of root architecture as well as growth restriction. The regulation of these processes requires the concerted action of several phytohormones, as well as the participation of the ubiquitous molecule NO. This review analyzes the role of NO in relation to the signaling pathways involved in stomatal movement, plant growth and senescence, in the frame of its interaction with abscisic acid, auxins, gibberellins, and ethylene.
Collapse
Affiliation(s)
- Marcela Simontacchi
- Instituto de Fisiología Vegetal (INFIVE) CC327, Universidad Nacional de La Plata-CONICET, Diagonal 113 y calle 61 N°495, CP 1900 La Plata, Buenos Aires, Argentina.
| | | | | | | | | |
Collapse
|
37
|
Li H, Song JB, Zhao WT, Yang ZM. AtHO1 is Involved in Iron Homeostasis in an NO-Dependent Manner. ACTA ACUST UNITED AC 2013; 54:1105-17. [DOI: 10.1093/pcp/pct063] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]
|
38
|
Dissecting plant iron homeostasis under short and long-term iron fluctuations. Biotechnol Adv 2013; 31:1292-307. [PMID: 23680191 DOI: 10.1016/j.biotechadv.2013.05.003] [Citation(s) in RCA: 46] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/15/2013] [Revised: 04/18/2013] [Accepted: 05/05/2013] [Indexed: 12/30/2022]
Abstract
A wealth of information on the different aspects of iron homeostasis in plants has been obtained during the last decade. However, there is no clear road-map integrating the relationships between the various components. The principal aim of the current review is to fill this gap. In this context we discuss the lack of low affinity iron uptake mechanisms in plants, the utilization of a different uptake mechanism by graminaceous plants compared to the others, as well as the roles of riboflavin, ferritin isoforms, nitric oxide, nitrosylation, heme, aconitase, and vacuolar pH. Cross-homeostasis between elements is also considered, with a specific emphasis on the relationship between iron homeostasis and phosphorus and copper deficiencies. As the environment is a crucial parameter for modulating plant responses, we also highlight how diurnal fluctuations govern iron metabolism. Evolutionary aspects of iron homeostasis have so far attracted little attention. Looking into the past can inform us on how long-term oxygen and iron-availability fluctuations have influenced the evolution of iron uptake mechanisms. Finally, we evaluate to what extent this homeostastic road map can be used for the development of novel biofortification strategies in order to alleviate iron deficiency in human.
Collapse
|
39
|
Liping Z, Hongbo S, Xiaohua L, Zhaopu L. Gene regulation of iron-deficiency responses is associated with carbon monoxide and heme oxydase 1 in Chlamydomonas reinhardtii. PLoS One 2013; 8:e53835. [PMID: 23349749 PMCID: PMC3551942 DOI: 10.1371/journal.pone.0053835] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/25/2012] [Accepted: 12/03/2012] [Indexed: 11/18/2022] Open
Abstract
Carbon monoxide (CO) as an endogenous gaseous molecule regulates a variety of biological processes in animals. However, CO regulating nutrient stress responses in green alga is largely unknown. On the other hand, heme oxydase (HO1 as a rate-limiting enzyme of the first step for heme degration and to catalyze heme into biliverdin (BV), which is concomitant with releasing of CO and ferrous ions, probably participates in the process of CO-regulating response to nutrient stress in green alga. In this paper, we described an observation that CO could regulate iron-homeostasis in iron-starving Chlamydomonas reinhardtii. Exogenous CO at 8 µM was able to prevent the iron deficient-inducing chlorosis and improve chlorophyll accumulation. Expression pattern of FOX1, FTR1 and ferredoxin was up-regulated by CO exposure in iron-deficient mediam. treatment with external CO increasing iron accumulation in iron-deficient C. reinhardtii. Moreover, to get insights into the regulatory role of HO1, we constructed a transgenic alga overexpressing HO1 and HO1 knock-out mutants. The results show that there was no significant influence on chlorosis with HO1 overexpression of C. reinhardtii under iron-deficiency and the chlorophyll accumulation, and gene expression associated with iron deficiency of mutant were greatly improved. Otherwise, those results from HO1 knock-out mutants were opposite to HO1 overexpression mutants. Finally, CO exposure induced NO accumulation in cells. However, such an action could be blocked by NO scavenger cPTIO. These results indicate that CO/HO1 may play an important role in improving green algae adaptation to iron deficiency or cross-talking with NO under the iron deficiency.
Collapse
Affiliation(s)
- Zhang Liping
- Jiangsu Key Lab of Marine Biology, College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, China
- Key Laboratory of Coastal Biology & Bioresources Utilization, Yantai Institute of Costal Zone Research(YIC), Chinese Academy of Sciences (CAS), Yantai, China
| | - Shao Hongbo
- Jiangsu Key Lab of Marine Biology, College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, China
- Key Laboratory of Coastal Biology & Bioresources Utilization, Yantai Institute of Costal Zone Research(YIC), Chinese Academy of Sciences (CAS), Yantai, China
- Institute of Life Sciences, Qingdao University of Science and Technology, Qingdao, China
- * E-mail: (SHB); (LXH); (LZP)
| | - Long Xiaohua
- Jiangsu Key Lab of Marine Biology, College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, China
- * E-mail: (SHB); (LXH); (LZP)
| | - Liu Zhaopu
- Jiangsu Key Lab of Marine Biology, College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, China
- * E-mail: (SHB); (LXH); (LZP)
| |
Collapse
|
40
|
Vigani G, Morandini P, Murgia I. Searching iron sensors in plants by exploring the link among 2'-OG-dependent dioxygenases, the iron deficiency response and metabolic adjustments occurring under iron deficiency. FRONTIERS IN PLANT SCIENCE 2013; 4:169. [PMID: 23755060 PMCID: PMC3668137 DOI: 10.3389/fpls.2013.00169] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/25/2013] [Accepted: 05/13/2013] [Indexed: 05/18/2023]
Abstract
Knowledge accumulated on the regulation of iron (Fe) homeostasis, its intracellular trafficking and transport across various cellular compartments and organs in plants; storage proteins, transporters and transcription factors involved in Fe metabolism have been analyzed in detail in recent years. However, the key sensor(s) of cellular plant "Fe status" triggering the long-distance shoot-root signaling and leading to the root Fe deficiency responses is (are) still unknown. Local Fe sensing is also a major task for roots, for adjusting the internal Fe requirements to external Fe availability: how such sensing is achieved and how it leads to metabolic adjustments in case of nutrient shortage, is mostly unknown. Two proteins belonging to the 2'-OG-dependent dioxygenases family accumulate several folds in Fe-deficient Arabidopsis roots. Such proteins require Fe(II) as enzymatic cofactor; one of their subgroups, the HIF-P4H (hypoxia-inducible factor-prolyl 4-hydroxylase), is an effective oxygen sensor in animal cells. We envisage here the possibility that some members of the 2'-OG dioxygenase family may be involved in the Fe deficiency response and in the metabolic adjustments to Fe deficiency or even in sensing Fe, in plant cells.
Collapse
Affiliation(s)
- Gianpiero Vigani
- Dipartimento di Scienze Agrarie ed Ambientali-Produzioni, Territorio, Agroenergia, Università degli Studi di MilanoMilano, Italy
| | - Piero Morandini
- Dipartimento di Bioscienze, Università degli Studi di MilanoMilano, Italy
| | - Irene Murgia
- Dipartimento di Bioscienze, Università degli Studi di MilanoMilano, Italy
- *Correspondence: Irene Murgia, Dipartimento di Bioscienze, Università degli Studi di Milano, Via Celoria 26, 20133 Milano, Italy e-mail:
| |
Collapse
|
41
|
|
42
|
Kobayashi T, Nishizawa NK. Iron uptake, translocation, and regulation in higher plants. ANNUAL REVIEW OF PLANT BIOLOGY 2012; 63:131-52. [PMID: 22404471 DOI: 10.1146/annurev-arplant-042811-105522] [Citation(s) in RCA: 641] [Impact Index Per Article: 53.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/18/2023]
Abstract
Iron is essential for the survival and proliferation of all plants. Higher plants have developed two distinct strategies to acquire iron, which is only slightly soluble, from the rhizosphere: the reduction strategy of nongraminaceous plants and the chelation strategy of graminaceous plants. Key molecular components-including transporters, enzymes, and chelators-have been clarified for both strategies, and many of these components are now thought to also function inside the plant to facilitate internal iron transport. Transporters for intracellular iron trafficking are also being clarified. A majority of genes encoding these components are transcriptionally regulated in response to iron availability. Recent research has uncovered central transcription factors, cis-acting elements, and molecular mechanisms regulating these genes. Manipulation of these molecular components has produced transgenic crops with enhanced tolerance to iron deficiency or with increased iron content in the edible parts.
Collapse
Affiliation(s)
- Takanori Kobayashi
- Research Institute for Bioresources and Biotechnology, Ishikawa Prefectural University, Nonoichi, Ishikawa, Japan.
| | | |
Collapse
|
43
|
Ramirez L, Simontacchi M, Murgia I, Zabaleta E, Lamattina L. Nitric oxide, nitrosyl iron complexes, ferritin and frataxin: a well equipped team to preserve plant iron homeostasis. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2011; 181:582-92. [PMID: 21893255 DOI: 10.1016/j.plantsci.2011.04.006] [Citation(s) in RCA: 44] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/28/2011] [Revised: 04/12/2011] [Accepted: 04/13/2011] [Indexed: 05/08/2023]
Abstract
Iron is a key element in plant nutrition. Iron deficiency as well as iron overload results in serious metabolic disorders that affect photosynthesis, respiration and general plant fitness with direct consequences on crop production. More than 25% of the cultivable land possesses low iron availability due to high pH (calcareous soils). Plant biologists are challenged by this concern and aimed to find new avenues to ameliorate plant responses and keep iron homeostasis under control even at wide range of iron availability in various soils. For this purpose, detailed knowledge of iron uptake, transport, storage and interactions with cellular compounds will help to construct a more complete picture of its role as essential nutrient. In this review, we summarize and describe the recent findings involving four central players involved in keeping cellular iron homeostasis in plants: nitric oxide, ferritin, frataxin and nitrosyl iron complexes. We attempt to highlight the interactions among these actors in different scenarios occurring under iron deficiency or iron overload, and discuss their counteracting and/or coordinating actions leading to the control of iron homeostasis.
Collapse
Affiliation(s)
- Leonor Ramirez
- Instituto de Investigaciones Biológicas, Universidad Nacional de Mar del Plata-CONICET, CC 1245 Mar del Plata, Argentina
| | | | | | | | | |
Collapse
|
44
|
Kovacic P, Somanathan R. Integrated approach to nitric oxide in animals and plants (mechanism and bioactivity): cell signaling and radicals. J Recept Signal Transduct Res 2011; 31:111-20. [DOI: 10.3109/10799893.2010.544317] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]
|
45
|
del Río LA. Peroxisomes as a cellular source of reactive nitrogen species signal molecules. Arch Biochem Biophys 2011; 506:1-11. [DOI: 10.1016/j.abb.2010.10.022] [Citation(s) in RCA: 108] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/16/2010] [Revised: 10/26/2010] [Accepted: 10/27/2010] [Indexed: 12/13/2022]
|
46
|
|
47
|
Tarantino D, Santo N, Morandini P, Casagrande F, Braun HP, Heinemeyer J, Vigani G, Soave C, Murgia I. AtFer4 ferritin is a determinant of iron homeostasis in Arabidopsis thaliana heterotrophic cells. JOURNAL OF PLANT PHYSIOLOGY 2010; 167:1598-605. [PMID: 20724023 DOI: 10.1016/j.jplph.2010.06.020] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/26/2010] [Revised: 06/04/2010] [Accepted: 06/05/2010] [Indexed: 05/08/2023]
Abstract
In plants, the iron storage protein ferritin can be targeted to both chloroplasts and mitochondria. To investigate the role of Arabidopsis ATFER4 ferritin in mitochondrial iron trafficking, atfer4-1 and atfer4-2 mutant knock-outs for the AtFer4 gene were grown in heterotrophic suspension cultures. Both mutants showed altered cell size and morphology, reduced viability, higher H₂O₂ content and reduced O₂ consumption rates when compared to wt. Although no reduction in total ferritin or in mitochondrial ferritin was observed in atfer4 mutants, total iron content increased in atfer4 cells and in atfer4 mitochondria. Transcript correlation analysis highlighted a partial inverse relationship between the transcript levels of the mitochondrial ferric reductase oxidase FRO3, putatively involved in mitochondrial iron import/export, and AtFer4. Consistent with this, FRO3 transcript levels were higher in atfer4 cells. We propose that the complex molecular network maintaining Fe cellular homeostasis requires, in Arabidopsis heterotrophic cells, a proper balance of the different ferritin isoforms, and that alteration of this equilibrium, such as that occurring in atfer4 mutants, is responsible for an altered Fe homeostasis resulting in a change of intraorganellar Fe trafficking.
Collapse
Affiliation(s)
- Delia Tarantino
- Dipartimento di Biologia, Università degli Studi di Milano, via Celoria 26, Italy
| | | | | | | | | | | | | | | | | |
Collapse
|
48
|
Briat JF, Ravet K, Arnaud N, Duc C, Boucherez J, Touraine B, Cellier F, Gaymard F. New insights into ferritin synthesis and function highlight a link between iron homeostasis and oxidative stress in plants. ANNALS OF BOTANY 2010; 105:811-22. [PMID: 19482877 PMCID: PMC2859905 DOI: 10.1093/aob/mcp128] [Citation(s) in RCA: 175] [Impact Index Per Article: 12.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/06/2009] [Revised: 03/30/2009] [Accepted: 04/06/2009] [Indexed: 05/18/2023]
Abstract
BACKGROUND Iron is an essential element for both plant productivity and nutritional quality. Improving plant iron content was attempted through genetic engineering of plants overexpressing ferritins. However, both the roles of these proteins in plant physiology, and the mechanisms involved in the regulation of their expression are largely unknown. Although the structure of ferritins is highly conserved between plants and animals, their cellular localization differs. Furthermore, regulation of ferritin gene expression in response to iron excess occurs at the transcriptional level in plants, in contrast to animals which regulate ferritin expression at the translational level. SCOPE In this review, an overview of our knowledge of bacterial and mammalian ferritin synthesis and functions is presented. Then the following will be reviewed: (a) the specific features of plant ferritins; (b) the regulation of their synthesis during development and in response to various environmental cues; and (c) their function in plant physiology, with special emphasis on the role that both bacterial and plant ferritins play during plant-bacteria interactions. Arabidopsis ferritins are encoded by a small nuclear gene family of four members which are differentially expressed. Recent results obtained by using this model plant enabled progress to be made in our understanding of the regulation of the synthesis and the in planta function of these various ferritins. CONCLUSIONS Studies on plant ferritin functions and regulation of their synthesis revealed strong links between these proteins and protection against oxidative stress. In contrast, their putative iron-storage function to furnish iron during various development processes is unlikely to be essential. Ferritins, by buffering iron, exert a fine tuning of the quantity of metal required for metabolic purposes, and help plants to cope with adverse situations, the deleterious effects of which would be amplified if no system had evolved to take care of free reactive iron.
Collapse
|
49
|
Ramirez L, Zabaleta EJ, Lamattina L. Nitric oxide and frataxin: two players contributing to maintain cellular iron homeostasis. ANNALS OF BOTANY 2010; 105:801-10. [PMID: 19556267 PMCID: PMC2859906 DOI: 10.1093/aob/mcp147] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/09/2009] [Revised: 03/11/2009] [Accepted: 04/28/2009] [Indexed: 05/19/2023]
Abstract
BACKGROUND Nitric oxide (NO) is a signalling and physiologically active molecule in animals, plants and bacteria. The specificity of the molecular mechanism(s) involved in transducing the NO signal within and between cells and tissues is still poorly understood. NO has been shown to be an emerging and potent signal molecule in plant growth, development and stress physiology. The NO donor S-nitrosoglutathion (GSNO) was shown to be a biologically active compound in plants and a candidate for NO storage and/or mobilization between plant tissues and cells. NO has been implicated as a central component in maintaining iron bioavailavility in plants. SCOPE AND CONCLUSIONS Iron is an essential nutrient for almost all organisms. This review presents an overview of the functions of NO in iron metabolism in animals and discusses how NO production constitutes a key response in plant iron sensing and availability. In plants, NO drives downstream responses to both iron deficiency and iron overload. NO-mediated improvement of iron nutrition in plants growing under iron-deficient conditions represents a powerful tool to cope with soils displaying low iron availability. An interconversion between different redox forms based on the iron and NO status of the plant cells might be the core of a metabolic process driving plant iron homeostasis. Frataxin, a recently identified protein in plants, plays an important role in mitochondria biogenesis and in maintaining mitochondrial iron homeostasis. Evidence regarding the interaction between frataxin, NO and iron from analysis of frataxin knock-down Arabidopsis thaliana mutants is reviewed and discussed.
Collapse
Affiliation(s)
| | | | - Lorenzo Lamattina
- Instituto de Investigaciones Biológicas, Facultad de Ciencias Exactas y Naturales, CONICET-Universidad Nacional de Mar del Plata, CC 1245, (7600) Mar del Plata, Argentina
| |
Collapse
|
50
|
Xiong J, Fu G, Tao L, Zhu C. Roles of nitric oxide in alleviating heavy metal toxicity in plants. Arch Biochem Biophys 2010; 497:13-20. [DOI: 10.1016/j.abb.2010.02.014] [Citation(s) in RCA: 124] [Impact Index Per Article: 8.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/12/2009] [Revised: 02/24/2010] [Accepted: 02/25/2010] [Indexed: 01/01/2023]
|