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Dong C, Peng X, Yang X, Wang C, Yuan L, Chen G, Tang X, Wang W, Wu J, Zhu S, Huang X, Zhang J, Hou J. Physiological and Transcriptomic Responses of Bok Choy to Heat Stress. PLANTS (BASEL, SWITZERLAND) 2024; 13:1093. [PMID: 38674501 PMCID: PMC11053463 DOI: 10.3390/plants13081093] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/27/2024] [Revised: 03/30/2024] [Accepted: 04/11/2024] [Indexed: 04/28/2024]
Abstract
High temperatures have adverse effects on the yield and quality of vegetables. Bok choy, a popular vegetable, shows varying resistance to heat. However, the mechanism underlying the thermotolerance of bok choy remains unclear. In this study, 26 bok choy varieties were identified in screening as being heat-resistant at the seedling stage; at 43 °C, it was possible to observe obvious heat damage in different bok choy varieties. The physiological and biochemical reactions of a heat-tolerant cultivar, Jinmei (J7), and a heat-sensitive cultivar, Sanyueman (S16), were analyzed in terms of the growth index, peroxide, and photosynthetic parameters. The results show that Jinmei has lower relative conductivity, lower peroxide content, and higher total antioxidant capacity after heat stress. We performed transcriptome analysis of the two bok choy varieties under heat stress and normal temperatures. Under heat stress, some key genes involved in sulfur metabolism, glutathione metabolism, and the ribosome pathway were found to be significantly upregulated in the heat-tolerant cultivar. The key genes of each pathway were screened according to their fold-change values. In terms of sulfur metabolism, genes related to protease activity were significantly upregulated. Glutathione synthetase (GSH2) in the glutathione metabolism pathway and the L3e, L23, and S19 genes in the ribosomal pathway were significantly upregulated in heat-stressed cultivars. These results suggest that the total antioxidant capacity and heat injury repair capacity are higher in Jinmei than in the heat-sensitive variety, which might be related to the specific upregulation of genes in certain metabolic pathways after heat stress.
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Affiliation(s)
- Cuina Dong
- Vegetable Genetics and Breeding Laboratory, College of Horticulture, Anhui Agricultural University, 130 West Changjiang Road, Hefei 230036, China; (C.D.)
| | - Xixuan Peng
- Vegetable Genetics and Breeding Laboratory, College of Horticulture, Anhui Agricultural University, 130 West Changjiang Road, Hefei 230036, China; (C.D.)
| | - Xiaona Yang
- Vegetable Genetics and Breeding Laboratory, College of Horticulture, Anhui Agricultural University, 130 West Changjiang Road, Hefei 230036, China; (C.D.)
| | - Chenggang Wang
- Vegetable Genetics and Breeding Laboratory, College of Horticulture, Anhui Agricultural University, 130 West Changjiang Road, Hefei 230036, China; (C.D.)
- Provincial Engineering Laboratory for Horticultural Crop Breeding of Anhui, 130 West of Changjiang Road, Hefei 230036, China
- Wanjiang Vegetable Industrial Technology Institute, Maanshan 238200, China
| | - Lingyun Yuan
- Vegetable Genetics and Breeding Laboratory, College of Horticulture, Anhui Agricultural University, 130 West Changjiang Road, Hefei 230036, China; (C.D.)
- Provincial Engineering Laboratory for Horticultural Crop Breeding of Anhui, 130 West of Changjiang Road, Hefei 230036, China
- Wanjiang Vegetable Industrial Technology Institute, Maanshan 238200, China
| | - Guohu Chen
- Vegetable Genetics and Breeding Laboratory, College of Horticulture, Anhui Agricultural University, 130 West Changjiang Road, Hefei 230036, China; (C.D.)
- Provincial Engineering Laboratory for Horticultural Crop Breeding of Anhui, 130 West of Changjiang Road, Hefei 230036, China
- Wanjiang Vegetable Industrial Technology Institute, Maanshan 238200, China
| | - Xiaoyan Tang
- Vegetable Genetics and Breeding Laboratory, College of Horticulture, Anhui Agricultural University, 130 West Changjiang Road, Hefei 230036, China; (C.D.)
- Provincial Engineering Laboratory for Horticultural Crop Breeding of Anhui, 130 West of Changjiang Road, Hefei 230036, China
- Wanjiang Vegetable Industrial Technology Institute, Maanshan 238200, China
| | - Wenjie Wang
- Vegetable Genetics and Breeding Laboratory, College of Horticulture, Anhui Agricultural University, 130 West Changjiang Road, Hefei 230036, China; (C.D.)
- Provincial Engineering Laboratory for Horticultural Crop Breeding of Anhui, 130 West of Changjiang Road, Hefei 230036, China
- Wanjiang Vegetable Industrial Technology Institute, Maanshan 238200, China
| | - Jianqiang Wu
- Vegetable Genetics and Breeding Laboratory, College of Horticulture, Anhui Agricultural University, 130 West Changjiang Road, Hefei 230036, China; (C.D.)
- Provincial Engineering Laboratory for Horticultural Crop Breeding of Anhui, 130 West of Changjiang Road, Hefei 230036, China
- Wanjiang Vegetable Industrial Technology Institute, Maanshan 238200, China
| | - Shidong Zhu
- Vegetable Genetics and Breeding Laboratory, College of Horticulture, Anhui Agricultural University, 130 West Changjiang Road, Hefei 230036, China; (C.D.)
- Provincial Engineering Laboratory for Horticultural Crop Breeding of Anhui, 130 West of Changjiang Road, Hefei 230036, China
- Wanjiang Vegetable Industrial Technology Institute, Maanshan 238200, China
| | - Xingxue Huang
- Wanjiang Vegetable Industrial Technology Institute, Maanshan 238200, China
| | - Jinlong Zhang
- Wanjiang Vegetable Industrial Technology Institute, Maanshan 238200, China
| | - Jinfeng Hou
- Vegetable Genetics and Breeding Laboratory, College of Horticulture, Anhui Agricultural University, 130 West Changjiang Road, Hefei 230036, China; (C.D.)
- Provincial Engineering Laboratory for Horticultural Crop Breeding of Anhui, 130 West of Changjiang Road, Hefei 230036, China
- Wanjiang Vegetable Industrial Technology Institute, Maanshan 238200, China
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Mankotia S, Jakhar P, Satbhai SB. HY5: a key regulator for light-mediated nutrient uptake and utilization by plants. THE NEW PHYTOLOGIST 2024; 241:1929-1935. [PMID: 38178773 DOI: 10.1111/nph.19516] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/22/2023] [Accepted: 12/11/2023] [Indexed: 01/06/2024]
Abstract
ELONGATED HYPOCOTYL 5 (HY5), a bZIP-type transcription factor, is a master regulator of light-mediated responses. ELONGATED HYPOCOTYL 5 binds to the promoter of c. 3000 genes, thereby regulating various physiological and biological processes, including photomorphogenesis, flavonoid biosynthesis, root development, response to abiotic stress and nutrient homeostasis. In recent decades, it has become clear that light signaling plays a crucial role in promoting nutrient uptake and assimilation. Recent studies have revealed the molecular mechanisms underlying such encouraging effects and the crucial function of the transcription factor HY5, whose activity is regulated by many photoreceptors. The discovery that HY5 directly activates the expression of genes involved in nutrient uptake and utilization, including several nitrogen, iron, sulphur, phosphorus and copper uptake and assimilation-related genes, enhances our understanding of how light signaling regulates uptake and utilisation of multiple nutrients in plants. Here, we review recent advances in the role of HY5 in light-dependent nutrient uptake and utilization.
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Affiliation(s)
- Samriti Mankotia
- Department of Biological Sciences, Indian Institute of Science Education and Research (IISER), Mohali, SAS Nagar, Punjab, 140306, India
| | - Pooja Jakhar
- Department of Biological Sciences, Indian Institute of Science Education and Research (IISER), Mohali, SAS Nagar, Punjab, 140306, India
| | - Santosh B Satbhai
- Department of Biological Sciences, Indian Institute of Science Education and Research (IISER), Mohali, SAS Nagar, Punjab, 140306, India
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Koprivova A, Elkatmis B, Gerlich SC, Trick M, Harper AL, Bancroft I, Kopriva S. Natural Variation in OASC Gene for Mitochondrial O-Acetylserine Thiollyase Affects Sulfate Levels in Arabidopsis. PLANTS (BASEL, SWITZERLAND) 2022; 12:35. [PMID: 36616163 PMCID: PMC9824738 DOI: 10.3390/plants12010035] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/11/2022] [Revised: 12/18/2022] [Accepted: 12/19/2022] [Indexed: 06/17/2023]
Abstract
Sulfur plays a vital role in the primary and secondary metabolism of plants, and carries an important function in a large number of different compounds. Despite this importance, compared to other mineral nutrients, relatively little is known about sulfur sensing and signalling, as well as about the mechanisms controlling sulfur metabolism and homeostasis. Sulfur contents in plants vary largely not only among different species, but also among accessions of the same species. We previously used associative transcriptomics to identify several genes potentially controlling variation in sulfate content in the leaves of Brassica napus, including an OASC gene for mitochondrial O-acetylserine thiollyase (OAS-TL), an enzyme involved in cysteine synthesis. Here, we show that loss of OASC in Arabidopsis thaliana lowers not only sulfate, but also glutathione levels in the leaves. The reduced accumulation is caused by lower sulfate uptake and translocation to the shoots; however, the flux through the pathway is not affected. In addition, we identified a single nucleotide polymorphism in the OASC gene among A. thaliana accessions that is linked to variation in sulfate content. Both genetic and transgenic complementation confirmed that the exchange of arginine at position 81 for lysine in numerous accessions resulted in a less active OASC and a lower sulfate content in the leaves. The mitochondrial isoform of OAS-TL is, thus, after the ATPS1 isoform of sulfurylase and the APR2 form of APS reductase 2, the next metabolic enzyme with a role in regulation of sulfate content in Arabidopsis.
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Affiliation(s)
- Anna Koprivova
- Institute for Plant Sciences, Cluster of Excellence on Plant Sciences, University of Cologne, Zülpicher Str. 47b, 50674 Cologne, Germany
| | - Büsra Elkatmis
- Institute for Plant Sciences, Cluster of Excellence on Plant Sciences, University of Cologne, Zülpicher Str. 47b, 50674 Cologne, Germany
| | - Silke C. Gerlich
- Institute for Plant Sciences, Cluster of Excellence on Plant Sciences, University of Cologne, Zülpicher Str. 47b, 50674 Cologne, Germany
| | - Martin Trick
- John Innes Centre, Norwich Research Park, Colney, Norwich NR4 7UH, UK
| | - Andrea L. Harper
- Department of Biology, University of York, Heslington, York YO10 5DD, UK
| | - Ian Bancroft
- Department of Biology, University of York, Heslington, York YO10 5DD, UK
| | - Stanislav Kopriva
- Institute for Plant Sciences, Cluster of Excellence on Plant Sciences, University of Cologne, Zülpicher Str. 47b, 50674 Cologne, Germany
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Chen Y, Li Z, Ettoumi FE, Li D, Wang L, Zhang X, Ma Q, Xu Y, Li L, Wu B, Luo Z. The detoxification of cellular sulfite in table grape under SO 2 exposure: Quantitative evidence of sulfur absorption and assimilation patterns. JOURNAL OF HAZARDOUS MATERIALS 2022; 439:129685. [PMID: 36104911 DOI: 10.1016/j.jhazmat.2022.129685] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/07/2022] [Revised: 07/13/2022] [Accepted: 07/25/2022] [Indexed: 06/15/2023]
Abstract
Sulfur dioxide (SO2) and its derivatives are known to be hazardous but their common application in food, especially the grape industry, is conditionally allowed. Potential hazards to consumers and the environment could occur upon the control-lost SO2 during grape logistics and storage. Researchers have usually focused on the anti-pathogen role of SO2 whereas limited efforts were conducted on the sulfur (S) absorption, assimilation patterns, and sulfite detoxification. In this study, short-term, room-temperature, and SO2-stored grapes were investigated, whose S flux of various forms was quantified through an estimation model. Accordingly, the additional accumulated S (0.50-0.86%) in pulps from atmospheric SO2 was considered mainly through rachis transport compared to across skin surfaces and the usage arrangement of the absorbed S was included. The first quantitative evidence of induced S assimilation under SO2 was also provided, which challenged the previous knowledge. In addition, sulfite oxidase and reductase (SiO and SiR) played major roles in sulfite detoxification, being effectively stimulated at multiple levels. The induced S metabolism associated with enhanced reactive oxygen species (ROS) scavenging capacity and alleviated senescence contributed to quality maintenance. Overall, these findings provide novel insights and are valuable supports for developing SO2-controlling strategies to avoid potential hazards.
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Affiliation(s)
- Yanpei Chen
- College of Biosystems Engineering and Food Science, Zhejiang University, Hangzhou, People's Republic of China
| | - Zhenbiao Li
- College of Biosystems Engineering and Food Science, Zhejiang University, Hangzhou, People's Republic of China
| | - Fatima-Ezzahra Ettoumi
- College of Biosystems Engineering and Food Science, Zhejiang University, Hangzhou, People's Republic of China
| | - Dong Li
- College of Biosystems Engineering and Food Science, Zhejiang University, Hangzhou, People's Republic of China.
| | - Lei Wang
- College of Biosystems Engineering and Food Science, Zhejiang University, Hangzhou, People's Republic of China
| | - Xiaochen Zhang
- College of Biosystems Engineering and Food Science, Zhejiang University, Hangzhou, People's Republic of China
| | - Quan Ma
- College of Biosystems Engineering and Food Science, Zhejiang University, Hangzhou, People's Republic of China
| | - Yanqun Xu
- College of Biosystems Engineering and Food Science, Zhejiang University, Hangzhou, People's Republic of China; Ningbo Research Institute, Zhejiang University, Ningbo, People's Republic of China
| | - Li Li
- College of Biosystems Engineering and Food Science, Zhejiang University, Hangzhou, People's Republic of China
| | - Bin Wu
- Institute of Agro-products Storage and Processing & Xinjiang Key Laboratory of Processing and Preservation of Agricultural Products, Xinjiang Academy of Agricultural Science, Urumqi, People's Republic of China
| | - Zisheng Luo
- College of Biosystems Engineering and Food Science, Zhejiang University, Hangzhou, People's Republic of China; Ningbo Research Institute, Zhejiang University, Ningbo, People's Republic of China; National-Local Joint Engineering Laboratory of Intelligent Food Technology and Equipment, Zhejiang Key Laboratory for Agri-Food Processing, Key Laboratory of Agro-Products Postharvest Handling of Ministry of Agriculture and Rural Affairs, Zhejiang University, Hangzhou, People's Republic of China.
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Günal S, Kopriva S. Measurement of flux through sulfate assimilation using [35S]sulfate. Methods Enzymol 2022; 676:197-209. [DOI: 10.1016/bs.mie.2022.07.021] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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Jia X, Jia X, Li T, Wang Y, Sun X, Huo L, Wang P, Che R, Gong X, Ma F. MdATG5a induces drought tolerance by improving the antioxidant defenses and promoting starch degradation in apple. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2021; 312:111052. [PMID: 34620447 DOI: 10.1016/j.plantsci.2021.111052] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/22/2021] [Revised: 08/29/2021] [Accepted: 09/03/2021] [Indexed: 06/13/2023]
Abstract
Drought occurrence seriously affects the productivity and quality of apple crop worldwide. Autophagy, a conserved process for the degradation and recycling of unwanted cellular components, is considered to positively regulate the tolerance of various abiotic stresses in plants. In the current study, we isolated two ATG5 homologs genes, namely, MdATG5a and MdATG5b, from apple, demonstrating their responsiveness to drought and oxidative stresses. In addition to having the same cellular localization in the nucleus and cytoplasm, both MdATG5a and MdATG5b could interact with MdATG12. Transgenic apple plants overexpressing MdATG5a exhibited an improved drought tolerance, as indicated by less drought-related damage and higher photosynthetic capacities compared to wild-type (WT) plants under drought stress. The overexpression of MdATG5a improved antioxidant defenses in apple when exposed to drought via elevating both antioxidant enzyme activities and the levels of beneficial antioxidants. Furthermore, under drought stress, the overexpression of MdATG5a promoted the mobilization of starch to accumulate greater levels of soluble sugars, contributing to osmotic adjustments and supporting carbon skeletons for proline synthesis. Such changes in physiological responses may be associated with increased autophagic activities in the transgenic plants upon exposure to drought. Our results demonstrate that MdATG5a-mediated autophagy enhances drought tolerance of apple plants via improving antioxidant defenses and metabolic adjustments.
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Affiliation(s)
- Xin Jia
- State Key Laboratory of Crop Stress Biology for Arid Areas/Shaanxi Key Laboratory of Apple, College of Horticulture, Northwest A&F University, Yangling, 712100, Shaanxi, China
| | - Xumei Jia
- State Key Laboratory of Crop Stress Biology for Arid Areas/Shaanxi Key Laboratory of Apple, College of Horticulture, Northwest A&F University, Yangling, 712100, Shaanxi, China
| | - Tiantian Li
- State Key Laboratory of Crop Stress Biology for Arid Areas/Shaanxi Key Laboratory of Apple, College of Horticulture, Northwest A&F University, Yangling, 712100, Shaanxi, China
| | - Yu Wang
- State Key Laboratory of Crop Stress Biology for Arid Areas/Shaanxi Key Laboratory of Apple, College of Horticulture, Northwest A&F University, Yangling, 712100, Shaanxi, China
| | - Xun Sun
- Center of Pear Engineering Technology Research, State Key Laboratory of Crop Genetics and Germplasm Enhancement, College of Horticulture, Nanjing Agricultural University, Nanjing, 210095, China
| | - Liuqing Huo
- State Key Laboratory of Crop Stress Biology for Arid Areas/Shaanxi Key Laboratory of Apple, College of Horticulture, Northwest A&F University, Yangling, 712100, Shaanxi, China
| | - Ping Wang
- State Key Laboratory of Crop Stress Biology for Arid Areas/Shaanxi Key Laboratory of Apple, College of Horticulture, Northwest A&F University, Yangling, 712100, Shaanxi, China
| | - Runmin Che
- State Key Laboratory of Crop Stress Biology for Arid Areas/Shaanxi Key Laboratory of Apple, College of Horticulture, Northwest A&F University, Yangling, 712100, Shaanxi, China
| | - Xiaoqing Gong
- State Key Laboratory of Crop Stress Biology for Arid Areas/Shaanxi Key Laboratory of Apple, College of Horticulture, Northwest A&F University, Yangling, 712100, Shaanxi, China.
| | - Fengwang Ma
- State Key Laboratory of Crop Stress Biology for Arid Areas/Shaanxi Key Laboratory of Apple, College of Horticulture, Northwest A&F University, Yangling, 712100, Shaanxi, China.
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7
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Bekturova A, Oshanova D, Tiwari P, Nurbekova Z, Kurmanbayeva A, Soltabayeva A, Yarmolinsky D, Srivastava S, Turecková V, Strnad M, Sagi M. Adenosine 5' phosphosulfate reductase and sulfite oxidase regulate sulfite-induced water loss in Arabidopsis. JOURNAL OF EXPERIMENTAL BOTANY 2021; 72:6447-6466. [PMID: 34107028 DOI: 10.1093/jxb/erab249] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/05/2021] [Accepted: 05/30/2021] [Indexed: 05/22/2023]
Abstract
Chloroplast-localized adenosine-5'-phosphosulphate reductase (APR) generates sulfite and plays a pivotal role in reduction of sulfate to cysteine. The peroxisome-localized sulfite oxidase (SO) oxidizes excess sulfite to sulfate. Arabidopsis wild type, SO RNA-interference (SO Ri) and SO overexpression (SO OE) transgenic lines infiltrated with sulfite showed increased water loss in SO Ri plants, and smaller stomatal apertures in SO OE plants compared with wild-type plants. Sulfite application also limited sulfate and abscisic acid-induced stomatal closure in wild type and SO Ri. The increases in APR activity in response to sulfite infiltration into wild type and SO Ri leaves resulted in an increase in endogenous sulfite, indicating that APR has an important role in sulfite-induced increases in stomatal aperture. Sulfite-induced H2O2 generation by NADPH oxidase led to enhanced APR expression and sulfite production. Suppression of APR by inhibiting NADPH oxidase and glutathione reductase2 (GR2), or mutation in APR2 or GR2, resulted in a decrease in sulfite production and stomatal apertures. The importance of APR and SO and the significance of sulfite concentrations in water loss were further demonstrated during rapid, harsh drought stress in root-detached wild-type, gr2 and SO transgenic plants. Our results demonstrate the role of SO in sulfite homeostasis in relation to water consumption in well-watered plants.
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Affiliation(s)
- Aizat Bekturova
- The Albert Katz International School for Desert Studies, The Jacob Blaustein Institutes for Desert Research, Ben-Gurion University of the Negev, Sede Boqer Campus, Israel
| | - Dinara Oshanova
- The Albert Katz International School for Desert Studies, The Jacob Blaustein Institutes for Desert Research, Ben-Gurion University of the Negev, Sede Boqer Campus, Israel
| | - Poonam Tiwari
- Jacob Blaustein Center for Scientific Cooperation, The Jacob Blaustein Institutes for Desert Research, Ben-Gurion University of the Negev, Sede Boqer Campus, Israel
| | - Zhadyrassyn Nurbekova
- The Albert Katz International School for Desert Studies, The Jacob Blaustein Institutes for Desert Research, Ben-Gurion University of the Negev, Sede Boqer Campus, Israel
| | - Assylay Kurmanbayeva
- The Albert Katz International School for Desert Studies, The Jacob Blaustein Institutes for Desert Research, Ben-Gurion University of the Negev, Sede Boqer Campus, Israel
| | - Aigerim Soltabayeva
- The Albert Katz International School for Desert Studies, The Jacob Blaustein Institutes for Desert Research, Ben-Gurion University of the Negev, Sede Boqer Campus, Israel
| | - Dmitry Yarmolinsky
- Jacob Blaustein Center for Scientific Cooperation, The Jacob Blaustein Institutes for Desert Research, Ben-Gurion University of the Negev, Sede Boqer Campus, Israel
| | - Sudhakar Srivastava
- Jacob Blaustein Center for Scientific Cooperation, The Jacob Blaustein Institutes for Desert Research, Ben-Gurion University of the Negev, Sede Boqer Campus, Israel
| | - Veronika Turecková
- Laboratory of Growth Regulators, Palacky University & Institute of Experimental Botany ASCR, Slechtitelu 11, Olomouc, Czech Republic
| | - Miroslav Strnad
- Laboratory of Growth Regulators, Palacky University & Institute of Experimental Botany ASCR, Slechtitelu 11, Olomouc, Czech Republic
| | - Moshe Sagi
- Plant Stress Laboratory, French Associates Institute for Agriculture and Biotechnology of Drylands, The Jacob Blaustein Institutes for Desert Research, Ben-Gurion University of the Negev, Sede-Boker Campus, Israel
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Yu Z, She M, Zheng T, Diepeveen D, Islam S, Zhao Y, Zhang Y, Tang G, Zhang Y, Zhang J, Blanchard CL, Ma W. Impact and mechanism of sulphur-deficiency on modern wheat farming nitrogen-related sustainability and gliadin content. Commun Biol 2021; 4:945. [PMID: 34362999 PMCID: PMC8346565 DOI: 10.1038/s42003-021-02458-7] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/08/2019] [Accepted: 07/18/2021] [Indexed: 02/07/2023] Open
Abstract
Two challenges that the global wheat industry is facing are a lowering nitrogen-use efficiency (NUE) and an increase in the reporting of wheat-protein related health issues. Sulphur deficiencies in soil has also been reported as a global issue. The current study used large-scale field and glasshouse experiments to investigate the sulphur fertilization impacts on sulphur deficient soil. Here we show that sulphur addition increased NUE by more than 20% through regulating glutamine synthetase. Alleviating the soil sulphur deficiency highly significantly reduced the amount of gliadin proteins indicating that soil sulphur levels may be related to the biosynthesis of proteins involved in wheat-induced human pathologies. The sulphur-dependent wheat gluten biosynthesis network was studied using transcriptome analysis and amino acid metabolomic pathway studies. The study concluded that sulphur deficiency in modern farming systems is not only having a profound negative impact on productivity but is also impacting on population health.
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Affiliation(s)
- Zitong Yu
- Food Futures Institute, College of Science, Health, Engineering and Education, Murdoch University, Perth, WA, Australia
| | - Maoyun She
- Food Futures Institute, College of Science, Health, Engineering and Education, Murdoch University, Perth, WA, Australia
| | - Ting Zheng
- Food Futures Institute, College of Science, Health, Engineering and Education, Murdoch University, Perth, WA, Australia
- Triticeas Research Institute, Sichuan Agriculture University, Chengdu, China
| | - Dean Diepeveen
- Food Futures Institute, College of Science, Health, Engineering and Education, Murdoch University, Perth, WA, Australia
- Department of Primary Industries and Regional Development, South Perth, WA, Australia
| | - Shahidul Islam
- Food Futures Institute, College of Science, Health, Engineering and Education, Murdoch University, Perth, WA, Australia
| | - Yun Zhao
- Food Futures Institute, College of Science, Health, Engineering and Education, Murdoch University, Perth, WA, Australia
| | - Yingquan Zhang
- Food Futures Institute, College of Science, Health, Engineering and Education, Murdoch University, Perth, WA, Australia
- Institute of Food Science and Technology, Chinese Academy of Agriculture Sciences, Beijing, China
| | - Guixiang Tang
- Food Futures Institute, College of Science, Health, Engineering and Education, Murdoch University, Perth, WA, Australia
- Department of Agronomy, Zhejiang University, Hangzhou, Zhejiang, China
| | - Yujuan Zhang
- Food Futures Institute, College of Science, Health, Engineering and Education, Murdoch University, Perth, WA, Australia
| | - Jingjuan Zhang
- Food Futures Institute, College of Science, Health, Engineering and Education, Murdoch University, Perth, WA, Australia
| | - Christopher L Blanchard
- ARC Industrial Transformation Training Centre for Functional Grain, Graham Centre for Agricultural Innovation, Charles Sturt University, Wagga Wagga, NSW, Australia
| | - Wujun Ma
- Food Futures Institute, College of Science, Health, Engineering and Education, Murdoch University, Perth, WA, Australia.
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Li Q, Gao Y, Yang A. Sulfur Homeostasis in Plants. Int J Mol Sci 2020; 21:E8926. [PMID: 33255536 PMCID: PMC7727837 DOI: 10.3390/ijms21238926] [Citation(s) in RCA: 43] [Impact Index Per Article: 10.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2020] [Revised: 11/15/2020] [Accepted: 11/20/2020] [Indexed: 12/19/2022] Open
Abstract
Sulfur (S) is an essential macronutrient for plant growth and development. S is majorly absorbed as sulfate from soil, and is then translocated to plastids in leaves, where it is assimilated into organic products. Cysteine (Cys) is the first organic product generated from S, and it is used as a precursor to synthesize many S-containing metabolites with important biological functions, such as glutathione (GSH) and methionine (Met). The reduction of sulfate takes place in a two-step reaction involving a variety of enzymes. Sulfate transporters (SULTRs) are responsible for the absorption of SO42- from the soil and the transport of SO42- in plants. There are 12-16 members in the S transporter family, which is divided into five categories based on coding sequence homology and biochemical functions. When exposed to S deficiency, plants will alter a series of morphological and physiological processes. Adaptive strategies, including cis-acting elements, transcription factors, non-coding microRNAs, and phytohormones, have evolved in plants to respond to S deficiency. In addition, there is crosstalk between S and other nutrients in plants. In this review, we summarize the recent progress in understanding the mechanisms underlying S homeostasis in plants.
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Affiliation(s)
| | | | - An Yang
- State Key Laboratory of Vegetation and Environmental Change, Institute of Botany, The Chinese Academy of Sciences, Beijing 100093, China; (Q.L.); (Y.G.)
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Shi W, Liu W, Ma C, Zhang Y, Ding S, Yu W, Deng S, Zhou J, Li H, Luo ZB. Dissecting MicroRNA-mRNA Regulatory Networks Underlying Sulfur Assimilation and Cadmium Accumulation in Poplar Leaves. PLANT & CELL PHYSIOLOGY 2020; 61:1614-1630. [PMID: 32678905 DOI: 10.1093/pcp/pcaa084] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/21/2020] [Accepted: 06/15/2020] [Indexed: 05/22/2023]
Abstract
The process of cadmium (Cd) accumulation and detoxification under different sulfur levels remains largely unknown in woody plants. To investigate the physiological and transcriptomic regulation mechanisms of poplars in response to different sulfate (S) supply levels and Cd exposure, we exposed Populus deltoides saplings to one of the low, moderate and high S levels together with either 0 or 50 µM Cd. Cd accumulation was decreased in low S-treated poplar leaves, and it tended to be increased in high S-supplied leaves under the Cd exposure condition. Sulfur nutrition was deficient in low S-supplied poplars, and it was improved in high S-treated leaves. Cd exposure resulted in lower sulfur level in the leaves supplied with moderate S, it exacerbated a Cd-induced sulfur decrease in low S-treated leaves and it caused a higher sulfur concentration in high S-supplied leaves. In line with the physiological changes, a number of mRNAs and microRNAs (miRNAs) involved in Cd accumulation and sulfur assimilation were identified and the miRNA-mRNA networks were dissected. In the networks, miR395 and miR399 members were identified as hub miRNAs and their targets were ATP sulfurylase 3 (ATPS3) and phosphate 2 (PHO2), respectively. These results suggest that Cd accumulation and sulfur assimilation are constrained by low and enhanced by high S supply, and Cd toxicity is aggravated by low and relieved by high S in poplar leaves, and that miRNA-mRNA regulatory networks play pivotal roles in sulfur-mediated Cd accumulation and detoxification in Cd-exposed poplars.
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Affiliation(s)
- Wenguang Shi
- State Key Laboratory of Tree Genetics and Breeding, Key Laboratory of Silviculture of the State Forestry and Grassland Administration, Research Institute of Forestry, Chinese Academy of Forestry, Beijing 100091, China
| | - Wenzhe Liu
- State Key Laboratory of Tree Genetics and Breeding, Key Laboratory of Silviculture of the State Forestry and Grassland Administration, Research Institute of Forestry, Chinese Academy of Forestry, Beijing 100091, China
| | - Chaofeng Ma
- State Key Laboratory of Tree Genetics and Breeding, Key Laboratory of Silviculture of the State Forestry and Grassland Administration, Research Institute of Forestry, Chinese Academy of Forestry, Beijing 100091, China
- College of Forestry, Northwest A&F University, Yangling, Shaanxi 712100, China
| | - Yuhong Zhang
- State Key Laboratory of Tree Genetics and Breeding, Key Laboratory of Silviculture of the State Forestry and Grassland Administration, Research Institute of Forestry, Chinese Academy of Forestry, Beijing 100091, China
- Annoroad Gene Technology Co., Ltd, 6 Kechuang Road, Beijing 100176, China
| | - Shen Ding
- College of Forestry, Northwest A&F University, Yangling, Shaanxi 712100, China
| | - Wenjian Yu
- State Key Laboratory of Tree Genetics and Breeding, Key Laboratory of Silviculture of the State Forestry and Grassland Administration, Research Institute of Forestry, Chinese Academy of Forestry, Beijing 100091, China
| | - Shurong Deng
- State Key Laboratory of Tree Genetics and Breeding, Key Laboratory of Silviculture of the State Forestry and Grassland Administration, Research Institute of Forestry, Chinese Academy of Forestry, Beijing 100091, China
| | - Jing Zhou
- State Key Laboratory of Tree Genetics and Breeding, Key Laboratory of Silviculture of the State Forestry and Grassland Administration, Research Institute of Forestry, Chinese Academy of Forestry, Beijing 100091, China
| | - Hong Li
- Postgraduate School, Chinese Academy of Forestry, Beijing 100091, China
| | - Zhi-Bin Luo
- State Key Laboratory of Tree Genetics and Breeding, Key Laboratory of Silviculture of the State Forestry and Grassland Administration, Research Institute of Forestry, Chinese Academy of Forestry, Beijing 100091, China
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11
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Tsai CJ, Xu P, Xue LJ, Hu H, Nyamdari B, Naran R, Zhou X, Goeminne G, Gao R, Gjersing E, Dahlen J, Pattathil S, Hahn MG, Davis MF, Ralph J, Boerjan W, Harding SA. Compensatory Guaiacyl Lignin Biosynthesis at the Expense of Syringyl Lignin in 4CL1-Knockout Poplar. PLANT PHYSIOLOGY 2020; 183:123-136. [PMID: 32139476 PMCID: PMC7210618 DOI: 10.1104/pp.19.01550] [Citation(s) in RCA: 22] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/20/2019] [Accepted: 02/26/2020] [Indexed: 05/22/2023]
Abstract
The lignin biosynthetic pathway is highly conserved in angiosperms, yet pathway manipulations give rise to a variety of taxon-specific outcomes. Knockout of lignin-associated 4-coumarate:CoA ligases (4CLs) in herbaceous species mainly reduces guaiacyl (G) lignin and enhances cell wall saccharification. Here we show that CRISPR-knockout of 4CL1 in poplar (Populus tremula × alba) preferentially reduced syringyl (S) lignin, with negligible effects on biomass recalcitrance. Concordant with reduced S-lignin was downregulation of ferulate 5-hydroxylases (F5Hs). Lignification was largely sustained by 4CL5, a low-affinity paralog of 4CL1 typically with only minor xylem expression or activity. Levels of caffeate, the preferred substrate of 4CL5, increased in line with significant upregulation of caffeoyl shikimate esterase1 Upregulation of caffeoyl-CoA O-methyltransferase1 and downregulation of F5Hs are consistent with preferential funneling of 4CL5 products toward G-lignin biosynthesis at the expense of S-lignin. Thus, transcriptional and metabolic adaptations to 4CL1-knockout appear to have enabled 4CL5 catalysis at a level sufficient to sustain lignification. Finally, genes involved in sulfur assimilation, the glutathione-ascorbate cycle, and various antioxidant systems were upregulated in the mutants, suggesting cascading responses to perturbed thioesterification in lignin biosynthesis.
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Affiliation(s)
- Chung-Jui Tsai
- Warnell School of Forestry and Natural Resources, University of Georgia, Athens, Georgia 30602
- Department of Genetics, University of Georgia, Athens, Georgia 30602
- Department of Plant Biology, University of Georgia, Athens, Georgia 30602
- Center for Bioenergy Innovation, Oak Ridge National Laboratory, Oak Ridge, Tennessee 37831
| | - Peng Xu
- Warnell School of Forestry and Natural Resources, University of Georgia, Athens, Georgia 30602
- Department of Genetics, University of Georgia, Athens, Georgia 30602
| | - Liang-Jiao Xue
- Warnell School of Forestry and Natural Resources, University of Georgia, Athens, Georgia 30602
- Department of Genetics, University of Georgia, Athens, Georgia 30602
- Center for Bioenergy Innovation, Oak Ridge National Laboratory, Oak Ridge, Tennessee 37831
| | - Hao Hu
- Warnell School of Forestry and Natural Resources, University of Georgia, Athens, Georgia 30602
- Department of Genetics, University of Georgia, Athens, Georgia 30602
| | - Batbayar Nyamdari
- Warnell School of Forestry and Natural Resources, University of Georgia, Athens, Georgia 30602
| | - Radnaa Naran
- Warnell School of Forestry and Natural Resources, University of Georgia, Athens, Georgia 30602
| | - Xiaohong Zhou
- Warnell School of Forestry and Natural Resources, University of Georgia, Athens, Georgia 30602
| | - Geert Goeminne
- Department of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Ghent, Belgium
- Vlaams Instituut voor Biotechnologie, UGent Center for Plant Systems Biology, 9052 Ghent, Belgium
| | - Ruili Gao
- Department of Biochemistry, University of Wisconsin-Madison, Madison, Wisconsin 53706
- Great Lakes Bioenergy Research Center, Wisconsin Energy Institute, University of Wisconsin-Madison, Madison, Wisconsin 53726
| | - Erica Gjersing
- National Renewable Energy Laboratory, Golden, Colorado 80401
- BioEnergy Science Center, Oak Ridge National Laboratory, Oak Ridge, Tennessee 37831
| | - Joseph Dahlen
- Warnell School of Forestry and Natural Resources, University of Georgia, Athens, Georgia 30602
| | - Sivakumar Pattathil
- BioEnergy Science Center, Oak Ridge National Laboratory, Oak Ridge, Tennessee 37831
- Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia 30602
| | - Michael G Hahn
- Department of Plant Biology, University of Georgia, Athens, Georgia 30602
- Center for Bioenergy Innovation, Oak Ridge National Laboratory, Oak Ridge, Tennessee 37831
- BioEnergy Science Center, Oak Ridge National Laboratory, Oak Ridge, Tennessee 37831
- Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia 30602
| | - Mark F Davis
- Center for Bioenergy Innovation, Oak Ridge National Laboratory, Oak Ridge, Tennessee 37831
- National Renewable Energy Laboratory, Golden, Colorado 80401
- BioEnergy Science Center, Oak Ridge National Laboratory, Oak Ridge, Tennessee 37831
| | - John Ralph
- Department of Biochemistry, University of Wisconsin-Madison, Madison, Wisconsin 53706
- Great Lakes Bioenergy Research Center, Wisconsin Energy Institute, University of Wisconsin-Madison, Madison, Wisconsin 53726
| | - Wout Boerjan
- Department of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Ghent, Belgium
- Vlaams Instituut voor Biotechnologie, UGent Center for Plant Systems Biology, 9052 Ghent, Belgium
| | - Scott A Harding
- Warnell School of Forestry and Natural Resources, University of Georgia, Athens, Georgia 30602
- Department of Genetics, University of Georgia, Athens, Georgia 30602
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12
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Visconti S, D'Ambrosio C, Fiorillo A, Arena S, Muzi C, Zottini M, Aducci P, Marra M, Scaloni A, Camoni L. Overexpression of 14-3-3 proteins enhances cold tolerance and increases levels of stress-responsive proteins of Arabidopsis plants. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2019; 289:110215. [PMID: 31623776 DOI: 10.1016/j.plantsci.2019.110215] [Citation(s) in RCA: 31] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/18/2019] [Revised: 07/22/2019] [Accepted: 08/06/2019] [Indexed: 05/13/2023]
Abstract
14-3-3 proteins are a family of conserved proteins present in eukaryotes as several isoforms, playing a regulatory role in many cellular and physiological processes. In plants, 14-3-3 proteins have been reported to be involved in the response to stress conditions, such as drought, salt and cold. In the present study, 14-3-3ε and 14-3-3ω isoforms, which were representative of ε and non-ε phylogenetic groups, were overexpressed in Arabidopsis thaliana plants; the effect of their overexpression was investigated on H+-ATPase activation and plant response to cold stress. Results demonstrated that H+-ATPase activity was increased in 14-3-3ω-overexpressing plants, whereas overexpression of both 14-3-3 isoforms brought about cold stress tolerance, which was evaluated through ion leakage, lipid peroxidation, osmolyte synthesis, and ROS production assays. A dedicated tandem mass tag (TMT)-based proteomic analysis demonstrated that different proteins involved in the plant response to cold or oxidative stress were over-represented in 14-3-3ε-overexpressing plants.
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Affiliation(s)
- Sabina Visconti
- Department of Biology, University of Rome Tor Vergata, 00133, Rome, Italy.
| | - Chiara D'Ambrosio
- Proteomics & Mass Spectrometry Laboratory ISPAAM, National Research Council, 80147, Naples, Italy.
| | - Anna Fiorillo
- Department of Biology, University of Rome Tor Vergata, 00133, Rome, Italy
| | - Simona Arena
- Proteomics & Mass Spectrometry Laboratory ISPAAM, National Research Council, 80147, Naples, Italy
| | - Carlo Muzi
- Department of Biology, University of Rome Tor Vergata, 00133, Rome, Italy
| | - Michela Zottini
- Department of Biology, University of Padova, 35131, Padova, Italy
| | - Patrizia Aducci
- Department of Biology, University of Rome Tor Vergata, 00133, Rome, Italy
| | - Mauro Marra
- Department of Biology, University of Rome Tor Vergata, 00133, Rome, Italy
| | - Andrea Scaloni
- Proteomics & Mass Spectrometry Laboratory ISPAAM, National Research Council, 80147, Naples, Italy
| | - Lorenzo Camoni
- Department of Biology, University of Rome Tor Vergata, 00133, Rome, Italy
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13
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Desulphurisation of Biogas: A Systematic Qualitative and Economic-Based Quantitative Review of Alternative Strategies. CHEMENGINEERING 2019. [DOI: 10.3390/chemengineering3030076] [Citation(s) in RCA: 43] [Impact Index Per Article: 8.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Abstract
The desulphurisation of biogas for hydrogen sulphide (H2S) removal constitutes a significant challenge in the area of biogas research. This is because the retention of H2S in biogas presents negative consequences on human health and equipment durability. The negative impacts are reflective of the potentially fatal and corrosive consequences reported when biogas containing H2S is inhaled and employed as a boiler biofuel, respectively. Recognising the importance of producing H2S-free biogas, this paper explores the current state of research in the area of desulphurisation of biogas. In the present paper, physical–chemical, biological, in-situ, and post-biogas desulphurisation strategies were extensively reviewed as the basis for providing a qualitative comparison of the strategies. Additionally, a review of the costing data combined with an analysis of the inherent data uncertainties due underlying estimation assumptions have also been undertaken to provide a basis for quantitative comparison of the desulphurisation strategies. It is anticipated that the combination of the qualitative and quantitative comparison approaches employed in assessing the desulphurisation strategies reviewed in the present paper will aid in future decisions involving the selection of the preferred biogas desulphurisation strategy to satisfy specific economic and performance-related targets.
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14
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Abstract
Sulfur is present in the amino acids cysteine and methionine and in a large range of essential coenzymes and cofactors and is therefore essential for all organisms. It is also a constituent of sulfate esters in proteins, carbohydrates, and numerous cellular metabolites. The sulfation and desulfation reactions modifying a variety of different substrates are commonly known as sulfation pathways. Although relatively little is known about the function of most sulfated metabolites, the synthesis of activated sulfate used in sulfation pathways is essential in both animal and plant kingdoms. In humans, mutations in the genes encoding the sulfation pathway enzymes underlie a number of developmental aberrations, and in flies and worms, their loss-of-function is fatal. In plants, a lower capacity for synthesizing activated sulfate for sulfation reactions results in dwarfism, and a complete loss of activated sulfate synthesis is also lethal. Here, we review the similarities and differences in sulfation pathways and associated processes in animals and plants, and we point out how they diverge from bacteria and yeast. We highlight the open questions concerning localization, regulation, and importance of sulfation pathways in both kingdoms and the ways in which findings from these "red" and "green" experimental systems may help reciprocally address questions specific to each of the systems.
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Affiliation(s)
- Süleyman Günal
- Botanical Institute, Cluster of Excellence on Plant Sciences (CEPLAS), University of Cologne, Cologne 50674, Germany
| | - Rebecca Hardman
- Institute of Metabolism and Systems Research, College of Medical and Dental Sciences, University of Birmingham, Birmingham B15 2TT, United Kingdom
| | - Stanislav Kopriva
- Botanical Institute, Cluster of Excellence on Plant Sciences (CEPLAS), University of Cologne, Cologne 50674, Germany.
| | - Jonathan Wolf Mueller
- Institute of Metabolism and Systems Research, College of Medical and Dental Sciences, University of Birmingham, Birmingham B15 2TT, United Kingdom; Centre for Endocrinology, Diabetes and Metabolism (CEDAM), Birmingham Health Partners, Birmingham B15 2TH, United Kingdom.
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15
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Feldman-Salit A, Veith N, Wirtz M, Hell R, Kummer U. Distribution of control in the sulfur assimilation in Arabidopsis thaliana depends on environmental conditions. THE NEW PHYTOLOGIST 2019; 222:1392-1404. [PMID: 30681147 DOI: 10.1111/nph.15704] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/10/2018] [Accepted: 01/13/2019] [Indexed: 05/24/2023]
Abstract
Sulfur assimilation is central to the survival of plants and has been studied under different environmental conditions. Multiple studies have been published trying to determine rate-limiting or controlling steps in this pathway. However, the picture remains inconclusive with at least two different enzymes proposed to represent such rate-limiting steps. Here, we used computational modeling to gain an integrative understanding of the distribution of control in the sulfur assimilation pathway of Arabidopsis thaliana. For this purpose, we set up a new ordinary differential equation (ODE)-based, kinetic model of sulfur assimilation encompassing all biochemical reactions directly involved in this process. We fitted the model to published experimental data and produced a model ensemble to deal with parameter uncertainties. The ensemble was validated against additional published experimental data. We used the model ensemble to subsequently analyse the control pattern and robustly identified a set of processes that share the control in this pathway under standard conditions. Interestingly, the pattern of control is dynamic and not static, that is it changes with changing environmental conditions. Therefore, while adenosine-5'-phosphosulfate reductase (APR) and sulfite reductase (SiR) share control under standard laboratory conditions, APR takes over an even more dominant role under sulfur starvation conditions.
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Affiliation(s)
- Anna Feldman-Salit
- Department Modeling of Biological Processes, COS Heidelberg/Bioquant, INF 267, Heidelberg University, 69120, Heidelberg, Germany
| | - Nadine Veith
- Department Modeling of Biological Processes, COS Heidelberg/Bioquant, INF 267, Heidelberg University, 69120, Heidelberg, Germany
| | - Markus Wirtz
- Department Molecular Biology of Plants, COS Heidelberg, INF 360, Heidelberg University, 69120, Heidelberg, Germany
| | - Rüdiger Hell
- Department Molecular Biology of Plants, COS Heidelberg, INF 360, Heidelberg University, 69120, Heidelberg, Germany
| | - Ursula Kummer
- Department Modeling of Biological Processes, COS Heidelberg/Bioquant, INF 267, Heidelberg University, 69120, Heidelberg, Germany
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16
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Luo T, Li S, Han D, Guo X, Shuai L, Wu Z. The effect of desulfurization on the postharvest quality and sulfite metabolism in pulp of sulfitated "Feizixiao" Litchi ( Litchi chinensis Sonn.) fruits. Food Sci Nutr 2019; 7:1715-1726. [PMID: 31139384 PMCID: PMC6526637 DOI: 10.1002/fsn3.1008] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2018] [Revised: 02/25/2019] [Accepted: 03/02/2019] [Indexed: 01/02/2023] Open
Abstract
The residual sulfite caused by sulfur fumigation (SF) is a hazard to health and influenced the export trade of litchi. Desulfurization (DS) is a valid chemical method to reduce the residual sulfite. However, the effect of DS on fumigated litchi has not been studied at physiological and molecular level. This study was aimed to evaluate the effect of DS (SF plus 3% desulfurizer) on the postharvest quality, sulfite residue, and the sulfite metabolism in sulfitated "Feizixiao" litchi during the 4°C storage. Results indicated that the DS promoted the color recovery of sulfitated litchi and achieved an effect similar to SF on controlling rot and browning. DS recovered the water content and respiration rate of sulfitated litchi pericarp. Thus, DS improves commodity properties of sulfitated litchi. Moreover, DS greatly reduced sulfite residue especially in pulp and ensured the edible safety of sulfitated litchi. The activities of sulfite oxidase, sulfite reductase, serine acetyltransferase, and O-acetylserine(thiol) lyase in pulp increased after SF but fell down after DS while the expressions of their encoding genes decreased after SF but then rallied after DS. These results indicated the key role of these enzymes in sulfite metabolism after SF and DS changed the sulfite metabolism at both enzymatic and transcriptional level. It could be concluded that DS used in this study was an effective method for improving the color recovery and ensuring the edible safety of sulfitated litchi by not only chemical reaction but also both of enzymatic and transcriptional regulation.
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Affiliation(s)
- Tao Luo
- College of Horticulture, South China Agricultural University/Guangdong Provincial Key Laboratory of Postharvest Science of Fruits and Vegetables/Engineering Research Center for Postharvest Technology of Horticultural Crops in South ChinaMinistry of EducationGuangzhouP.R. China
| | - Shuangshuang Li
- College of Horticulture, South China Agricultural University/Guangdong Provincial Key Laboratory of Postharvest Science of Fruits and Vegetables/Engineering Research Center for Postharvest Technology of Horticultural Crops in South ChinaMinistry of EducationGuangzhouP.R. China
| | - Dongmei Han
- Institute of Fruit Tree Research, Guangdong Academy of Agricultural Sciences/Key Laboratory of South Subtropical Fruit Biology and Genetic Resource UtilizationMinistry of AgricultureGuangzhouP.R. China
| | - Xiaomeng Guo
- College of Horticulture, South China Agricultural University/Guangdong Provincial Key Laboratory of Postharvest Science of Fruits and Vegetables/Engineering Research Center for Postharvest Technology of Horticultural Crops in South ChinaMinistry of EducationGuangzhouP.R. China
| | - Liang Shuai
- College of Food and Biological Engineering/Institute of Food Science and Engineering TechnologyHezhou UniversityHezhouP.R. China
| | - Zhenxian Wu
- College of Horticulture, South China Agricultural University/Guangdong Provincial Key Laboratory of Postharvest Science of Fruits and Vegetables/Engineering Research Center for Postharvest Technology of Horticultural Crops in South ChinaMinistry of EducationGuangzhouP.R. China
- Guangdong Litchi Engineering Research Center/Key Laboratory of Biology and Genetic Improvement of Horticultural Crops (South China) of Ministry of AgricultureGuangzhouP.R. China
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17
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Scheerer U, Trube N, Netzer F, Rennenberg H, Herschbach C. ATP as Phosphorus and Nitrogen Source for Nutrient Uptake by Fagus sylvatica and Populus x canescens Roots. FRONTIERS IN PLANT SCIENCE 2019; 10:378. [PMID: 31019519 PMCID: PMC6458296 DOI: 10.3389/fpls.2019.00378] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/27/2018] [Accepted: 03/12/2019] [Indexed: 05/08/2023]
Abstract
The present study elucidated whether roots of temperate forest trees can take up organic phosphorus in the form of ATP. Detached non-mycorrhizal roots of beech (Fagus sylvatica) and gray poplar (Populus x canescens) were exposed under controlled conditions to 33P-ATP and/or 13C/15N labeled ATP in the presence and absence of the acid phosphatase inhibitor MoO4 2-. Accumulation of the respective label in the roots was used to calculate 33P, 13C and 15N uptake rates in ATP equivalents for comparison reason. The present data shown that a significant part of ATP was cleaved outside the roots before phosphate (Pi) was taken up. Furthermore, nucleotide uptake seems more reasonable after cleavage of at least one Pi unit as ADP, AMP and/or as the nucleoside adenosine. Similar results were obtained when still attached mycorrhizal roots of adult beech trees and their natural regeneration of two forest stands were exposed to ATP in the presence or absence of MoO4 2-. Cleavage of Pi from ATP by enzymes commonly present in the rhizosphere, such as extracellular acid phosphatases, ecto-apyrase and/or nucleotidases, prior ADP/AMP/adenosine uptake is highly probable but depended on the soil type and the pH of the soil solution. Although uptake of ATP/ADP/AMP cannot be excluded, uptake of the nucleoside adenosine without breakdown into its constituents ribose and adenine is highly evident. Based on the 33P, 13C, and 15N uptake rates calculated as equivalents of ATP the 'pro and contra' for the uptake of nucleotides and nucleosides is discussed. Short Summary Roots take up phosphorus from ATP as Pi after cleavage but might also take up ADP and/or AMP by yet unknown nucleotide transporter(s) because at least the nucleoside adenosine as N source is taken up without cleavage into its constituents ribose and adenine.
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Affiliation(s)
- Ursula Scheerer
- Chair of Tree Physiology, Institute of Forest Sciences, Albert-Ludwigs-University Freiburg, Freiburg, Germany
| | - Niclas Trube
- Chair of Tree Physiology, Institute of Forest Sciences, Albert-Ludwigs-University Freiburg, Freiburg, Germany
| | - Florian Netzer
- Chair of Tree Physiology, Institute of Forest Sciences, Albert-Ludwigs-University Freiburg, Freiburg, Germany
- Chair of Ecosystem Physiology, Institute of Forest Sciences, Albert-Ludwigs-University Freiburg, Freiburg, Germany
| | - Heinz Rennenberg
- Chair of Tree Physiology, Institute of Forest Sciences, Albert-Ludwigs-University Freiburg, Freiburg, Germany
| | - Cornelia Herschbach
- Chair of Tree Physiology, Institute of Forest Sciences, Albert-Ludwigs-University Freiburg, Freiburg, Germany
- Chair of Ecosystem Physiology, Institute of Forest Sciences, Albert-Ludwigs-University Freiburg, Freiburg, Germany
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18
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Samuilov S, Rademacher N, Brilhaus D, Flachbart S, Arab L, Kopriva S, Weber APM, Mettler-Altmann T, Rennenberg H. Knock-Down of the Phosphoserine Phosphatase Gene Effects Rather N- Than S-Metabolism in Arabidopsis thaliana. FRONTIERS IN PLANT SCIENCE 2018; 9:1830. [PMID: 30619403 PMCID: PMC6297848 DOI: 10.3389/fpls.2018.01830] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/20/2018] [Accepted: 11/26/2018] [Indexed: 05/24/2023]
Abstract
The aim of present study was to elucidate the significance of the phosphorylated pathway of Ser production for Cys biosynthesis in leaves at day and night and upon cadmium (Cd) exposure. For this purpose, Arabidopsis wildtype plants as control and its psp mutant knocked-down in phosphoserine phosphatase (PSP) were used to test if (i) photorespiratory Ser is the dominant precursor of Cys synthesis in autotrophic tissue in the light, (ii) the phosphorylated pathway of Ser production can take over Ser biosynthesis in leaves at night, and (iii) Cd exposure stimulates Cys and glutathione (GSH) biosynthesis and effects the crosstalk of S and N metabolism, irrespective of the Ser source. Glycine (Gly) and Ser contents were not affected by reduction of the psp transcript level confirming that the photorespiratory pathway is the main route of Ser synthesis. The reduction of the PSP transcript level in the mutant did not affect day/night regulation of sulfur fluxes while day/night fluctuation of sulfur metabolite amounts were no longer observed, presumably due to slower turnover of sulfur metabolites in the mutant. Enhanced contents of non-protein thiols in both genotypes and of GSH only in the psp mutant were observed upon Cd treatment. Mutation of the phosphorylated pathway of Ser biosynthesis caused an accumulation of alanine, aspartate, lysine and a decrease of branched-chain amino acids. Knock-down of the PSP gene induced additional defense mechanisms against Cd toxicity that differ from those of WT plants.
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Affiliation(s)
- Sladjana Samuilov
- Chair of Tree Physiology, Institute of Forest Sciences, Faculty of Environment and Natural Resources, University of Freiburg, Freiburg, Germany
| | - Nadine Rademacher
- Institute of Plant Biochemistry, Cluster of Excellence on Plant Sciences, Heinrich Heine University, Düsseldorf, Germany
| | - Dominik Brilhaus
- Institute of Plant Biochemistry, Cluster of Excellence on Plant Sciences, Heinrich Heine University, Düsseldorf, Germany
| | - Samantha Flachbart
- Institute of Plant Biochemistry, Cluster of Excellence on Plant Sciences, Heinrich Heine University, Düsseldorf, Germany
| | - Leila Arab
- Chair of Tree Physiology, Institute of Forest Sciences, Faculty of Environment and Natural Resources, University of Freiburg, Freiburg, Germany
| | - Stanislav Kopriva
- Botanical Institute, Cluster of Excellence on Plant Sciences, University of Cologne, Cologne, Germany
| | - Andreas P. M. Weber
- Institute of Plant Biochemistry, Cluster of Excellence on Plant Sciences, Heinrich Heine University, Düsseldorf, Germany
| | - Tabea Mettler-Altmann
- Institute of Plant Biochemistry, Cluster of Excellence on Plant Sciences, Heinrich Heine University, Düsseldorf, Germany
| | - Heinz Rennenberg
- Chair of Tree Physiology, Institute of Forest Sciences, Faculty of Environment and Natural Resources, University of Freiburg, Freiburg, Germany
- College of Science, King Saud University, Riyadh, Saudi Arabia
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19
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Samuilov S, Brilhaus D, Rademacher N, Flachbart S, Arab L, Alfarraj S, Kuhnert F, Kopriva S, Weber APM, Mettler-Altmann T, Rennenberg H. The Photorespiratory BOU Gene Mutation Alters Sulfur Assimilation and Its Crosstalk With Carbon and Nitrogen Metabolism in Arabidopsis thaliana. FRONTIERS IN PLANT SCIENCE 2018; 9:1709. [PMID: 30559749 PMCID: PMC6284229 DOI: 10.3389/fpls.2018.01709] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/07/2018] [Accepted: 11/02/2018] [Indexed: 05/24/2023]
Abstract
This study was aimed at elucidating the significance of photorespiratory serine (Ser) production for cysteine (Cys) biosynthesis. For this purpose, sulfur (S) metabolism and its crosstalk with nitrogen (N) and carbon (C) metabolism were analyzed in wildtype Arabidopsis and its photorespiratory bou-2 mutant with impaired glycine decarboxylase (GDC) activity. Foliar glycine and Ser contents were enhanced in the mutant at day and night. The high Ser levels in the mutant cannot be explained by transcript abundances of genes of the photorespiratory pathway or two alternative pathways of Ser biosynthesis. Despite enhanced foliar Ser, reduced GDC activity mediated a decline in sulfur flux into major sulfur pools in the mutant, as a result of deregulation of genes of sulfur reduction and assimilation. Still, foliar Cys and glutathione contents in the mutant were enhanced. The use of Cys for methionine and glucosinolates synthesis was reduced in the mutant. Reduced GDC activity in the mutant downregulated Calvin Cycle and nitrogen assimilation genes, upregulated key enzymes of glycolysis and the tricarboxylic acid (TCA) pathway and modified accumulation of sugars and TCA intermediates. Thus, photorespiratory Ser production can be replaced by other metabolic Ser sources, but this replacement deregulates the cross-talk between S, N, and C metabolism.
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Affiliation(s)
- Sladjana Samuilov
- Chair of Tree Physiology, Institute of Forest Sciences, Faculty of Environment and Natural Resources, University of Freiburg, Freiburg im Breisgau, Germany
| | - Dominik Brilhaus
- Institute of Plant Biochemistry, Cluster of Excellence on Plant Sciences, Heinrich Heine University, Düsseldorf, Germany
| | - Nadine Rademacher
- Institute of Plant Biochemistry, Cluster of Excellence on Plant Sciences, Heinrich Heine University, Düsseldorf, Germany
| | - Samantha Flachbart
- Institute of Plant Biochemistry, Cluster of Excellence on Plant Sciences, Heinrich Heine University, Düsseldorf, Germany
| | - Leila Arab
- Chair of Tree Physiology, Institute of Forest Sciences, Faculty of Environment and Natural Resources, University of Freiburg, Freiburg im Breisgau, Germany
| | - Saleh Alfarraj
- College of Sciences, King Saud University, Riyadh, Saudi Arabia
| | - Franziska Kuhnert
- Institute of Plant Biochemistry, Cluster of Excellence on Plant Sciences, Heinrich Heine University, Düsseldorf, Germany
| | - Stanislav Kopriva
- Botanical Institute, Cluster of Excellence on Plant Sciences, University of Cologne, Cologne, Germany
| | - Andreas P. M. Weber
- Institute of Plant Biochemistry, Cluster of Excellence on Plant Sciences, Heinrich Heine University, Düsseldorf, Germany
| | - Tabea Mettler-Altmann
- Institute of Plant Biochemistry, Cluster of Excellence on Plant Sciences, Heinrich Heine University, Düsseldorf, Germany
| | - Heinz Rennenberg
- Chair of Tree Physiology, Institute of Forest Sciences, Faculty of Environment and Natural Resources, University of Freiburg, Freiburg im Breisgau, Germany
- College of Sciences, King Saud University, Riyadh, Saudi Arabia
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Ma C, Chen Y, Ding S, Li Z, Shi WG, Zhang Y, Luo ZB. Sulfur nutrition stimulates lead accumulation and alleviates its toxicity in Populus deltoides. TREE PHYSIOLOGY 2018; 38:1724-1741. [PMID: 29939370 DOI: 10.1093/treephys/tpy069] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/20/2017] [Accepted: 05/19/2018] [Indexed: 05/24/2023]
Abstract
Sulfur (S) can modulate plant responses to toxic heavy metals, but the underlying physiological and transcriptional regulation mechanisms remain largely unknown. To investigate the effects of S supply on lead (Pb)-induced toxicity in poplars, Populus deltoides monilifera (Aiton) Eckenw. saplings were exposed to 0 or 50 μM Pb together with one of the three S concentrations (0 (low S), 100 (moderate S) or 1500 (high S) μM Na2SO4). Populus deltoides roots absorbed Pb and it was partially translocated to the aerial organs, thereby decreasing the CO2 assimilation rate and leaf growth. Lead accumulation in poplars caused the overproduction of O2- and H2O2 to induce higher levels of total thiols (T-SH) and glutathione (GSH). Lead uptake by the roots and its accumulation in the aerial organs were repressed by low S application, but stimulated by high S supply. Lead-induced O2- and H2O2 production were exacerbated by S limitation, but alleviated by high S supply. Moreover, the concentrations of S-containing antioxidants including T-SH and GSH were reduced in S-deficient poplars, but increased in high S-treated plants, which corresponded well to the changes in the activities of enzymes involved in S assimilation and GSH biosynthesis. The transcript levels of both genes encoding sulfate transporters, i.e., SULTR1.1 and SULTR2.2, were elevated by low S application or high S supply in the roots, and the transcriptional upregulation of both genes was more pronounced under Pb exposure. Furthermore, the mRNA levels of several genes involved in S assimilation and the biosynthesis of GSH and phytochelatins, i.e., ATPS1, ATPS3, GSHS1, GSHS2 and PCS1, were upregulated in poplar roots with high S supply, particularly under Pb exposure. These results indicate that a high S supply can stimulate Pb accumulation and reduce its toxicity in poplars by improving S assimilation and stimulating the biosynthesis of S-containing compounds including T-SH and GSH.
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Affiliation(s)
- Chaofeng Ma
- State Key Laboratory of Tree Genetics and Breeding, Research Institute of Forestry, Chinese Academy of Forestry, Beijing, China
- College of Forestry, Northwest A&F University, Yangling, Shaanxi, China
| | - Yinghao Chen
- College of Forestry, Northwest A&F University, Yangling, Shaanxi, China
| | - Shen Ding
- College of Forestry, Northwest A&F University, Yangling, Shaanxi, China
| | - Ziliang Li
- College of Forestry, Northwest A&F University, Yangling, Shaanxi, China
| | - Wen-Guang Shi
- State Key Laboratory of Tree Genetics and Breeding, Research Institute of Forestry, Chinese Academy of Forestry, Beijing, China
| | - Yi Zhang
- College of Forestry, Northwest A&F University, Yangling, Shaanxi, China
| | - Zhi-Bin Luo
- State Key Laboratory of Tree Genetics and Breeding, Research Institute of Forestry, Chinese Academy of Forestry, Beijing, China
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21
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Yu Z, Juhasz A, Islam S, Diepeveen D, Zhang J, Wang P, Ma W. Impact of mid-season sulphur deficiency on wheat nitrogen metabolism and biosynthesis of grain protein. Sci Rep 2018; 8:2499. [PMID: 29410526 PMCID: PMC5802717 DOI: 10.1038/s41598-018-20935-8] [Citation(s) in RCA: 32] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/31/2017] [Accepted: 01/26/2018] [Indexed: 01/02/2023] Open
Abstract
Wheat (Triticum aestivum) quality is mainly determined by grain storage protein compositions. Sulphur availability is essential for the biosynthesis of the main wheat storage proteins. In this study, the impact of different sulphur fertilizer regimes on a range of agronomically important traits and associated gene networks was studied. High-performance liquid chromatography was used to analyse the protein compositions of grains grown under four different sulphur treatments. Results revealed that sulphur supplementation had a significant effect on grain yield, harvest index, and storage protein compositions. Consequently, two comparative sulphur fertilizer treatments (0 and 30 kg ha-1 sulphur, with 50 kg ha-1 nitrogen) at seven days post-anthesis were selected for a transcriptomics analysis to screen for differentially expressed genes (DEGs) involved in the regulation of sulphur metabolic pathways. The International Wheat Genome Sequencing Consortium chromosome survey sequence was used as reference. Higher sulphur supply led to one up-regulated DEG and sixty-three down-regulated DEGs. Gene ontology enrichment showed that four down-regulated DEGs were significantly enriched in nitrogen metabolic pathway related annotation, three of which were annotated as glutamine synthetase. The Kyoto Encyclopedia of Genes and Genomes pathway enrichment identified three significantly enriched pathways involved in nitrogen and amino acid metabolism.
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Affiliation(s)
- Zitong Yu
- State Agricultural Biotechnology Centre, School of Veterinary and Life Science, Murdoch University, Perth, WA, 6150, Australia
| | - Angela Juhasz
- State Agricultural Biotechnology Centre, School of Veterinary and Life Science, Murdoch University, Perth, WA, 6150, Australia
| | - Shahidul Islam
- State Agricultural Biotechnology Centre, School of Veterinary and Life Science, Murdoch University, Perth, WA, 6150, Australia
| | - Dean Diepeveen
- State Agricultural Biotechnology Centre, School of Veterinary and Life Science, Murdoch University, Perth, WA, 6150, Australia
- Western Australian Department of Agriculture & Food, 3 Baron-Hay Ct, South Perth, WA, 6151, Australia
| | - Jingjuan Zhang
- State Agricultural Biotechnology Centre, School of Veterinary and Life Science, Murdoch University, Perth, WA, 6150, Australia
| | - Penghao Wang
- State Agricultural Biotechnology Centre, School of Veterinary and Life Science, Murdoch University, Perth, WA, 6150, Australia
| | - Wujun Ma
- State Agricultural Biotechnology Centre, School of Veterinary and Life Science, Murdoch University, Perth, WA, 6150, Australia.
- Australia-China Joint Centre for Wheat Improvement, Murdoch University, Perth, WA, 6150, Australia.
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22
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Netzer F, Mueller CW, Scheerer U, Grüner J, Kögel-Knabner I, Herschbach C, Rennenberg H. Phosphorus nutrition of Populus × canescens reflects adaptation to high P-availability in the soil. TREE PHYSIOLOGY 2018; 38:6-24. [PMID: 29077948 DOI: 10.1093/treephys/tpx126] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/20/2017] [Accepted: 09/13/2017] [Indexed: 05/04/2023]
Abstract
Phosphorus (P) constitutes one of five macronutrients essential for plant growth and development due to the central function of phosphate in energy metabolism, inheritance and metabolic control. In many ecosystems, plant available soil-P gets limited by soil aging. Hence, plants have developed adaptation strategies to cope with such limitation by an efficient plant and ecosystem internal P-cycling during annual growth. The natural floodplain habitat of fast-growing Populus × canescens is characterized by high soil-P availability. It was thus expected that the P-nutrition of P. × canescens had adapted to this conditions. Therefore, different P-fractions in different twig tissues were investigated during two annual growth cycles. The P-nutrition of P. × canescens markedly differs from that of European beech grown at low soil-P availability (Netzer F, Schmid C, Herschbach C, Rennenberg H (2017) Phosphorus-nutrition of European beech (Fagus sylvatica L.) during annual growth depends on tree age and P-availability in the soil. Environ Exp Bot 137:194-207). This was mainly due to a lack of tree internal P-cycling during annual growth indicated by the absence of P-storage and remobilization in twig bark and wood. Hence, strategies to economize P-nutrition and to prevent P-losses had not developed. This fits with the fast-growth strategy of P. × canescens at unrestricted P-availability. Hence, the P-nutrition strategy of P. × canescens can be seen as an evolutionary adaptation to its natural growth habitat.
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Affiliation(s)
- Florian Netzer
- Chair of Tree Physiology, Institute of Forest Sciences, Albert-Ludwigs-University Freiburg, Georges-Köhler-Allee 53/54, 79110 Freiburg, Germany
| | - Carsten W Mueller
- Chair of Soil Science, Department of Ecology and Ecosystem Management, Wissenschaftszentrum Weihenstephan, Emil-Ramann-Straße 2, 85354 Freising, Germany
| | - Ursula Scheerer
- Chair of Tree Physiology, Institute of Forest Sciences, Albert-Ludwigs-University Freiburg, Georges-Köhler-Allee 53/54, 79110 Freiburg, Germany
| | - Jörg Grüner
- Chair of Forest Botany, Albert-Ludwigs-University Freiburg, Bertoldstraße 17, 79085 Freiburg, Germany
| | - Ingrid Kögel-Knabner
- Chair of Soil Science, Department of Ecology and Ecosystem Management, Wissenschaftszentrum Weihenstephan, Emil-Ramann-Straße 2, 85354 Freising, Germany
- Institute for Advanced Study, Technical University of Munich, 85748 Garching, Germany
| | - Cornelia Herschbach
- Chair of Tree Physiology, Institute of Forest Sciences, Albert-Ludwigs-University Freiburg, Georges-Köhler-Allee 53/54, 79110 Freiburg, Germany
| | - Heinz Rennenberg
- Chair of Tree Physiology, Institute of Forest Sciences, Albert-Ludwigs-University Freiburg, Georges-Köhler-Allee 53/54, 79110 Freiburg, Germany
- King Saud University, College of Science, PO Box 2455, Riyadh 11451, Saudi Arabia
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23
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Malcheska F, Ahmad A, Batool S, Müller HM, Ludwig-Müller J, Kreuzwieser J, Randewig D, Hänsch R, Mendel RR, Hell R, Wirtz M, Geiger D, Ache P, Hedrich R, Herschbach C, Rennenberg H. Drought-Enhanced Xylem Sap Sulfate Closes Stomata by Affecting ALMT12 and Guard Cell ABA Synthesis. PLANT PHYSIOLOGY 2017; 174:798-814. [PMID: 28446637 PMCID: PMC5462012 DOI: 10.1104/pp.16.01784] [Citation(s) in RCA: 65] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/10/2017] [Accepted: 04/18/2017] [Indexed: 05/20/2023]
Abstract
Water limitation of plants causes stomatal closure to prevent water loss by transpiration. For this purpose, progressing soil water deficit is communicated from roots to shoots. Abscisic acid (ABA) is the key signal in stress-induced stomatal closure, but ABA as an early xylem-delivered signal is still a matter of debate. In this study, poplar plants (Populus × canescens) were exposed to water stress to investigate xylem sap sulfate and ABA, stomatal conductance, and sulfate transporter (SULTR) expression. In addition, stomatal behavior and expression of ABA receptors, drought-responsive genes, transcription factors, and NCED3 were studied after feeding sulfate and ABA to detached poplar leaves and epidermal peels of Arabidopsis (Arabidopsis thaliana). The results show that increased xylem sap sulfate is achieved upon drought by reduced xylem unloading by PtaSULTR3;3a and PtaSULTR1;1, and by enhanced loading from parenchyma cells into the xylem via PtaALMT3b. Sulfate application caused stomatal closure in excised leaves and peeled epidermis. In the loss of sulfate-channel function mutant, Atalmt12, sulfate-triggered stomatal closure was impaired. The QUAC1/ALMT12 anion channel heterologous expressed in oocytes was gated open by extracellular sulfate. Sulfate up-regulated the expression of NCED3, a key step of ABA synthesis, in guard cells. In conclusion, xylem-derived sulfate seems to be a chemical signal of drought that induces stomatal closure via QUAC1/ALMT12 and/or guard cell ABA synthesis.
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Affiliation(s)
- Frosina Malcheska
- Professur für Baumphysiologie, Institut für Forstwissenschaften, Albert-Ludwigs-Universität Freiburg, 79110 Freiburg, Germany (F.M., J.K., D.R., C.H., H.R.)
- Department of Botany, Faculty of Life Sciences, Aligrah Muslim University, Aligrah 202002, India (A.A.)
- Department IV Molecular Biology of Plants, Centre for Organismal Studies Heidelberg University, 69120 Heidelberg, Germany (S.B., Rü.H., M.W.)
- Julius-von-Sachs-Institut für Biowissenschaften, Julius-Maximulians-Universität Würzburg Lehrstuhl für Molekulare Pflanzenphysiologie und Biophysik, 97082 Würzburg, Germany (H.M.M., D.G., P.A., Ra.H.)
- Institut für Botanik, Technische Universität Dresden, 01062 Dresden, Germany (J.L.-M.)
- Institut für Pflanzenbiologie, Technische Universität Braunschweig, 38106 Braunschweig, Germany (Ro.H., R.R.M.); and
- King Saud University, Riyadh 11451, Saudi Arabia (H.R.)
| | - Altaf Ahmad
- Professur für Baumphysiologie, Institut für Forstwissenschaften, Albert-Ludwigs-Universität Freiburg, 79110 Freiburg, Germany (F.M., J.K., D.R., C.H., H.R.)
- Department of Botany, Faculty of Life Sciences, Aligrah Muslim University, Aligrah 202002, India (A.A.)
- Department IV Molecular Biology of Plants, Centre for Organismal Studies Heidelberg University, 69120 Heidelberg, Germany (S.B., Rü.H., M.W.)
- Julius-von-Sachs-Institut für Biowissenschaften, Julius-Maximulians-Universität Würzburg Lehrstuhl für Molekulare Pflanzenphysiologie und Biophysik, 97082 Würzburg, Germany (H.M.M., D.G., P.A., Ra.H.)
- Institut für Botanik, Technische Universität Dresden, 01062 Dresden, Germany (J.L.-M.)
- Institut für Pflanzenbiologie, Technische Universität Braunschweig, 38106 Braunschweig, Germany (Ro.H., R.R.M.); and
- King Saud University, Riyadh 11451, Saudi Arabia (H.R.)
| | - Sundas Batool
- Professur für Baumphysiologie, Institut für Forstwissenschaften, Albert-Ludwigs-Universität Freiburg, 79110 Freiburg, Germany (F.M., J.K., D.R., C.H., H.R.)
- Department of Botany, Faculty of Life Sciences, Aligrah Muslim University, Aligrah 202002, India (A.A.)
- Department IV Molecular Biology of Plants, Centre for Organismal Studies Heidelberg University, 69120 Heidelberg, Germany (S.B., Rü.H., M.W.)
- Julius-von-Sachs-Institut für Biowissenschaften, Julius-Maximulians-Universität Würzburg Lehrstuhl für Molekulare Pflanzenphysiologie und Biophysik, 97082 Würzburg, Germany (H.M.M., D.G., P.A., Ra.H.)
- Institut für Botanik, Technische Universität Dresden, 01062 Dresden, Germany (J.L.-M.)
- Institut für Pflanzenbiologie, Technische Universität Braunschweig, 38106 Braunschweig, Germany (Ro.H., R.R.M.); and
- King Saud University, Riyadh 11451, Saudi Arabia (H.R.)
| | - Heike M Müller
- Professur für Baumphysiologie, Institut für Forstwissenschaften, Albert-Ludwigs-Universität Freiburg, 79110 Freiburg, Germany (F.M., J.K., D.R., C.H., H.R.)
- Department of Botany, Faculty of Life Sciences, Aligrah Muslim University, Aligrah 202002, India (A.A.)
- Department IV Molecular Biology of Plants, Centre for Organismal Studies Heidelberg University, 69120 Heidelberg, Germany (S.B., Rü.H., M.W.)
- Julius-von-Sachs-Institut für Biowissenschaften, Julius-Maximulians-Universität Würzburg Lehrstuhl für Molekulare Pflanzenphysiologie und Biophysik, 97082 Würzburg, Germany (H.M.M., D.G., P.A., Ra.H.)
- Institut für Botanik, Technische Universität Dresden, 01062 Dresden, Germany (J.L.-M.)
- Institut für Pflanzenbiologie, Technische Universität Braunschweig, 38106 Braunschweig, Germany (Ro.H., R.R.M.); and
- King Saud University, Riyadh 11451, Saudi Arabia (H.R.)
| | - Jutta Ludwig-Müller
- Professur für Baumphysiologie, Institut für Forstwissenschaften, Albert-Ludwigs-Universität Freiburg, 79110 Freiburg, Germany (F.M., J.K., D.R., C.H., H.R.)
- Department of Botany, Faculty of Life Sciences, Aligrah Muslim University, Aligrah 202002, India (A.A.)
- Department IV Molecular Biology of Plants, Centre for Organismal Studies Heidelberg University, 69120 Heidelberg, Germany (S.B., Rü.H., M.W.)
- Julius-von-Sachs-Institut für Biowissenschaften, Julius-Maximulians-Universität Würzburg Lehrstuhl für Molekulare Pflanzenphysiologie und Biophysik, 97082 Würzburg, Germany (H.M.M., D.G., P.A., Ra.H.)
- Institut für Botanik, Technische Universität Dresden, 01062 Dresden, Germany (J.L.-M.)
- Institut für Pflanzenbiologie, Technische Universität Braunschweig, 38106 Braunschweig, Germany (Ro.H., R.R.M.); and
- King Saud University, Riyadh 11451, Saudi Arabia (H.R.)
| | - Jürgen Kreuzwieser
- Professur für Baumphysiologie, Institut für Forstwissenschaften, Albert-Ludwigs-Universität Freiburg, 79110 Freiburg, Germany (F.M., J.K., D.R., C.H., H.R.)
- Department of Botany, Faculty of Life Sciences, Aligrah Muslim University, Aligrah 202002, India (A.A.)
- Department IV Molecular Biology of Plants, Centre for Organismal Studies Heidelberg University, 69120 Heidelberg, Germany (S.B., Rü.H., M.W.)
- Julius-von-Sachs-Institut für Biowissenschaften, Julius-Maximulians-Universität Würzburg Lehrstuhl für Molekulare Pflanzenphysiologie und Biophysik, 97082 Würzburg, Germany (H.M.M., D.G., P.A., Ra.H.)
- Institut für Botanik, Technische Universität Dresden, 01062 Dresden, Germany (J.L.-M.)
- Institut für Pflanzenbiologie, Technische Universität Braunschweig, 38106 Braunschweig, Germany (Ro.H., R.R.M.); and
- King Saud University, Riyadh 11451, Saudi Arabia (H.R.)
| | - Dörte Randewig
- Professur für Baumphysiologie, Institut für Forstwissenschaften, Albert-Ludwigs-Universität Freiburg, 79110 Freiburg, Germany (F.M., J.K., D.R., C.H., H.R.)
- Department of Botany, Faculty of Life Sciences, Aligrah Muslim University, Aligrah 202002, India (A.A.)
- Department IV Molecular Biology of Plants, Centre for Organismal Studies Heidelberg University, 69120 Heidelberg, Germany (S.B., Rü.H., M.W.)
- Julius-von-Sachs-Institut für Biowissenschaften, Julius-Maximulians-Universität Würzburg Lehrstuhl für Molekulare Pflanzenphysiologie und Biophysik, 97082 Würzburg, Germany (H.M.M., D.G., P.A., Ra.H.)
- Institut für Botanik, Technische Universität Dresden, 01062 Dresden, Germany (J.L.-M.)
- Institut für Pflanzenbiologie, Technische Universität Braunschweig, 38106 Braunschweig, Germany (Ro.H., R.R.M.); and
- King Saud University, Riyadh 11451, Saudi Arabia (H.R.)
| | - Robert Hänsch
- Professur für Baumphysiologie, Institut für Forstwissenschaften, Albert-Ludwigs-Universität Freiburg, 79110 Freiburg, Germany (F.M., J.K., D.R., C.H., H.R.)
- Department of Botany, Faculty of Life Sciences, Aligrah Muslim University, Aligrah 202002, India (A.A.)
- Department IV Molecular Biology of Plants, Centre for Organismal Studies Heidelberg University, 69120 Heidelberg, Germany (S.B., Rü.H., M.W.)
- Julius-von-Sachs-Institut für Biowissenschaften, Julius-Maximulians-Universität Würzburg Lehrstuhl für Molekulare Pflanzenphysiologie und Biophysik, 97082 Würzburg, Germany (H.M.M., D.G., P.A., Ra.H.)
- Institut für Botanik, Technische Universität Dresden, 01062 Dresden, Germany (J.L.-M.)
- Institut für Pflanzenbiologie, Technische Universität Braunschweig, 38106 Braunschweig, Germany (Ro.H., R.R.M.); and
- King Saud University, Riyadh 11451, Saudi Arabia (H.R.)
| | - Ralf R Mendel
- Professur für Baumphysiologie, Institut für Forstwissenschaften, Albert-Ludwigs-Universität Freiburg, 79110 Freiburg, Germany (F.M., J.K., D.R., C.H., H.R.)
- Department of Botany, Faculty of Life Sciences, Aligrah Muslim University, Aligrah 202002, India (A.A.)
- Department IV Molecular Biology of Plants, Centre for Organismal Studies Heidelberg University, 69120 Heidelberg, Germany (S.B., Rü.H., M.W.)
- Julius-von-Sachs-Institut für Biowissenschaften, Julius-Maximulians-Universität Würzburg Lehrstuhl für Molekulare Pflanzenphysiologie und Biophysik, 97082 Würzburg, Germany (H.M.M., D.G., P.A., Ra.H.)
- Institut für Botanik, Technische Universität Dresden, 01062 Dresden, Germany (J.L.-M.)
- Institut für Pflanzenbiologie, Technische Universität Braunschweig, 38106 Braunschweig, Germany (Ro.H., R.R.M.); and
- King Saud University, Riyadh 11451, Saudi Arabia (H.R.)
| | - Rüdiger Hell
- Professur für Baumphysiologie, Institut für Forstwissenschaften, Albert-Ludwigs-Universität Freiburg, 79110 Freiburg, Germany (F.M., J.K., D.R., C.H., H.R.)
- Department of Botany, Faculty of Life Sciences, Aligrah Muslim University, Aligrah 202002, India (A.A.)
- Department IV Molecular Biology of Plants, Centre for Organismal Studies Heidelberg University, 69120 Heidelberg, Germany (S.B., Rü.H., M.W.)
- Julius-von-Sachs-Institut für Biowissenschaften, Julius-Maximulians-Universität Würzburg Lehrstuhl für Molekulare Pflanzenphysiologie und Biophysik, 97082 Würzburg, Germany (H.M.M., D.G., P.A., Ra.H.)
- Institut für Botanik, Technische Universität Dresden, 01062 Dresden, Germany (J.L.-M.)
- Institut für Pflanzenbiologie, Technische Universität Braunschweig, 38106 Braunschweig, Germany (Ro.H., R.R.M.); and
- King Saud University, Riyadh 11451, Saudi Arabia (H.R.)
| | - Markus Wirtz
- Professur für Baumphysiologie, Institut für Forstwissenschaften, Albert-Ludwigs-Universität Freiburg, 79110 Freiburg, Germany (F.M., J.K., D.R., C.H., H.R.)
- Department of Botany, Faculty of Life Sciences, Aligrah Muslim University, Aligrah 202002, India (A.A.)
- Department IV Molecular Biology of Plants, Centre for Organismal Studies Heidelberg University, 69120 Heidelberg, Germany (S.B., Rü.H., M.W.)
- Julius-von-Sachs-Institut für Biowissenschaften, Julius-Maximulians-Universität Würzburg Lehrstuhl für Molekulare Pflanzenphysiologie und Biophysik, 97082 Würzburg, Germany (H.M.M., D.G., P.A., Ra.H.)
- Institut für Botanik, Technische Universität Dresden, 01062 Dresden, Germany (J.L.-M.)
- Institut für Pflanzenbiologie, Technische Universität Braunschweig, 38106 Braunschweig, Germany (Ro.H., R.R.M.); and
- King Saud University, Riyadh 11451, Saudi Arabia (H.R.)
| | - Dietmar Geiger
- Professur für Baumphysiologie, Institut für Forstwissenschaften, Albert-Ludwigs-Universität Freiburg, 79110 Freiburg, Germany (F.M., J.K., D.R., C.H., H.R.)
- Department of Botany, Faculty of Life Sciences, Aligrah Muslim University, Aligrah 202002, India (A.A.)
- Department IV Molecular Biology of Plants, Centre for Organismal Studies Heidelberg University, 69120 Heidelberg, Germany (S.B., Rü.H., M.W.)
- Julius-von-Sachs-Institut für Biowissenschaften, Julius-Maximulians-Universität Würzburg Lehrstuhl für Molekulare Pflanzenphysiologie und Biophysik, 97082 Würzburg, Germany (H.M.M., D.G., P.A., Ra.H.)
- Institut für Botanik, Technische Universität Dresden, 01062 Dresden, Germany (J.L.-M.)
- Institut für Pflanzenbiologie, Technische Universität Braunschweig, 38106 Braunschweig, Germany (Ro.H., R.R.M.); and
- King Saud University, Riyadh 11451, Saudi Arabia (H.R.)
| | - Peter Ache
- Professur für Baumphysiologie, Institut für Forstwissenschaften, Albert-Ludwigs-Universität Freiburg, 79110 Freiburg, Germany (F.M., J.K., D.R., C.H., H.R.)
- Department of Botany, Faculty of Life Sciences, Aligrah Muslim University, Aligrah 202002, India (A.A.)
- Department IV Molecular Biology of Plants, Centre for Organismal Studies Heidelberg University, 69120 Heidelberg, Germany (S.B., Rü.H., M.W.)
- Julius-von-Sachs-Institut für Biowissenschaften, Julius-Maximulians-Universität Würzburg Lehrstuhl für Molekulare Pflanzenphysiologie und Biophysik, 97082 Würzburg, Germany (H.M.M., D.G., P.A., Ra.H.)
- Institut für Botanik, Technische Universität Dresden, 01062 Dresden, Germany (J.L.-M.)
- Institut für Pflanzenbiologie, Technische Universität Braunschweig, 38106 Braunschweig, Germany (Ro.H., R.R.M.); and
- King Saud University, Riyadh 11451, Saudi Arabia (H.R.)
| | - Rainer Hedrich
- Professur für Baumphysiologie, Institut für Forstwissenschaften, Albert-Ludwigs-Universität Freiburg, 79110 Freiburg, Germany (F.M., J.K., D.R., C.H., H.R.)
- Department of Botany, Faculty of Life Sciences, Aligrah Muslim University, Aligrah 202002, India (A.A.)
- Department IV Molecular Biology of Plants, Centre for Organismal Studies Heidelberg University, 69120 Heidelberg, Germany (S.B., Rü.H., M.W.)
- Julius-von-Sachs-Institut für Biowissenschaften, Julius-Maximulians-Universität Würzburg Lehrstuhl für Molekulare Pflanzenphysiologie und Biophysik, 97082 Würzburg, Germany (H.M.M., D.G., P.A., Ra.H.)
- Institut für Botanik, Technische Universität Dresden, 01062 Dresden, Germany (J.L.-M.)
- Institut für Pflanzenbiologie, Technische Universität Braunschweig, 38106 Braunschweig, Germany (Ro.H., R.R.M.); and
- King Saud University, Riyadh 11451, Saudi Arabia (H.R.)
| | - Cornelia Herschbach
- Professur für Baumphysiologie, Institut für Forstwissenschaften, Albert-Ludwigs-Universität Freiburg, 79110 Freiburg, Germany (F.M., J.K., D.R., C.H., H.R.);
- Department of Botany, Faculty of Life Sciences, Aligrah Muslim University, Aligrah 202002, India (A.A.);
- Department IV Molecular Biology of Plants, Centre for Organismal Studies Heidelberg University, 69120 Heidelberg, Germany (S.B., Rü.H., M.W.);
- Julius-von-Sachs-Institut für Biowissenschaften, Julius-Maximulians-Universität Würzburg Lehrstuhl für Molekulare Pflanzenphysiologie und Biophysik, 97082 Würzburg, Germany (H.M.M., D.G., P.A., Ra.H.);
- Institut für Botanik, Technische Universität Dresden, 01062 Dresden, Germany (J.L.-M.);
- Institut für Pflanzenbiologie, Technische Universität Braunschweig, 38106 Braunschweig, Germany (Ro.H., R.R.M.); and
- King Saud University, Riyadh 11451, Saudi Arabia (H.R.)
| | - Heinz Rennenberg
- Professur für Baumphysiologie, Institut für Forstwissenschaften, Albert-Ludwigs-Universität Freiburg, 79110 Freiburg, Germany (F.M., J.K., D.R., C.H., H.R.)
- Department of Botany, Faculty of Life Sciences, Aligrah Muslim University, Aligrah 202002, India (A.A.)
- Department IV Molecular Biology of Plants, Centre for Organismal Studies Heidelberg University, 69120 Heidelberg, Germany (S.B., Rü.H., M.W.)
- Julius-von-Sachs-Institut für Biowissenschaften, Julius-Maximulians-Universität Würzburg Lehrstuhl für Molekulare Pflanzenphysiologie und Biophysik, 97082 Würzburg, Germany (H.M.M., D.G., P.A., Ra.H.)
- Institut für Botanik, Technische Universität Dresden, 01062 Dresden, Germany (J.L.-M.)
- Institut für Pflanzenbiologie, Technische Universität Braunschweig, 38106 Braunschweig, Germany (Ro.H., R.R.M.); and
- King Saud University, Riyadh 11451, Saudi Arabia (H.R.)
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Insect haptoelectrical stimulation of Venus flytrap triggers exocytosis in gland cells. Proc Natl Acad Sci U S A 2017; 114:4822-4827. [PMID: 28416693 DOI: 10.1073/pnas.1701860114] [Citation(s) in RCA: 40] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
The Venus flytrap Dionaea muscipula captures insects and consumes their flesh. Prey contacting touch-sensitive hairs trigger traveling electrical waves. These action potentials (APs) cause rapid closure of the trap and activate secretory functions of glands, which cover its inner surface. Such prey-induced haptoelectric stimulation activates the touch hormone jasmonate (JA) signaling pathway, which initiates secretion of an acidic hydrolase mixture to decompose the victim and acquire the animal nutrients. Although postulated since Darwin's pioneering studies, these secretory events have not been recorded so far. Using advanced analytical and imaging techniques, such as vibrating ion-selective electrodes, carbon fiber amperometry, and magnetic resonance imaging, we monitored stimulus-coupled glandular secretion into the flytrap. Trigger-hair bending or direct application of JA caused a quantal release of oxidizable material from gland cells monitored as distinct amperometric spikes. Spikes reminiscent of exocytotic events in secretory animal cells progressively increased in frequency, reaching steady state 1 d after stimulation. Our data indicate that trigger-hair mechanical stimulation evokes APs. Gland cells translate APs into touch-inducible JA signaling that promotes the formation of secretory vesicles. Early vesicles loaded with H+ and Cl- fuse with the plasma membrane, hyperacidifying the "green stomach"-like digestive organ, whereas subsequent ones carry hydrolases and nutrient transporters, together with a glutathione redox moiety, which is likely to act as the major detected compound in amperometry. Hence, when glands perceive the haptoelectrical stimulation, secretory vesicles are tailored to be released in a sequence that optimizes digestion of the captured animal.
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Biochemistry and Physiology of Heavy Metal Resistance and Accumulation in Euglena. ADVANCES IN EXPERIMENTAL MEDICINE AND BIOLOGY 2017; 979:91-121. [PMID: 28429319 DOI: 10.1007/978-3-319-54910-1_6] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Abstract
Free-living microorganisms may become suitable models for removal of heavy metals from polluted water bodies, sediments, and soils by using and enhancing their metal accumulating abilities. The available research data indicate that protists of the genus Euglena are a highly promising group of microorganisms to be used in bio-remediation of heavy metal-polluted aerobic and anaerobic acidic aquatic environments. This chapter analyzes the variety of biochemical mechanisms evolved in E. gracilis to resist, accumulate and remove heavy metals from the environment, being the most relevant those involving (1) adsorption to the external cell pellicle; (2) intracellular binding by glutathione and glutathione polymers, and their further compartmentalization as heavy metal-complexes into chloroplasts and mitochondria; (3) polyphosphate biosynthesis; and (4) secretion of organic acids. The available data at the transcriptional, kinetic and metabolic levels on these metabolic/cellular processes are herein reviewed and analyzed to provide mechanistic basis for developing genetically engineered Euglena cells that may have a greater removal and accumulating capacity for bioremediation and recycling of heavy metals.
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Bao Y, Liu X, Zhang W, Cao J, Li W, Li C, Lin Z. Identification of a regulation network in response to cadmium toxicity using blood clam Tegillarca granosa as model. Sci Rep 2016; 6:35704. [PMID: 27760991 PMCID: PMC5071765 DOI: 10.1038/srep35704] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/27/2016] [Accepted: 10/04/2016] [Indexed: 12/19/2022] Open
Abstract
Clam, a filter-feeding lamellibranch mollusk, is capable to accumulate high levels of trace metals and has therefore become a model for investigation the mechanism of heavy metal toxification. In this study, the effects of cadmium were characterized in the gills of Tegillarca granosa during a 96-hour exposure course using integrated metabolomic and proteomic approaches. Neurotoxicity and disturbances in energy metabolism were implicated according to the metabolic responses after Cd exposure, and eventually affected the osmotic function of gill tissue. Proteomic analysis showed that oxidative stress, calcium-binding and sulfur-compound metabolism proteins were key factors responding to Cd challenge. A knowledge-based network regulation model was constructed with both metabolic and proteomic data. The model suggests that Cd stimulation mainly inhibits a core regulation network that is associated with histone function, ribosome processing and tight junctions, with the hub proteins actin, gamma 1 and Calmodulin 1. Moreover, myosin complex inhibition causes abnormal tight junctions and is linked to the irregular synthesis of amino acids. For the first time, this study provides insight into the proteomic and metabolomic changes caused by Cd in the blood clam T. granosa and suggests a potential toxicological pathway for Cd.
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Affiliation(s)
- Yongbo Bao
- Zhejiang Key Laboratory of Aquatic Germplasm Resources, College of Biological & Environmental Sciences, Zhejiang Wanli University, Ningbo, Zhejiang, 315100, P.R. China
| | - Xiao Liu
- Department of Systems biology, GFK, Shanghai Biotech Inc., Shanghai, 201112, P.R. China
| | - Weiwei Zhang
- School of Marine Scienes, Ningbo University, Ningbo, Zhejiang, 315010, P.R. China
| | - Jianping Cao
- Ningbo Yinzhou Measurement and Test Center for Quality and Technique Supervising, Ningbo, Zhejiang, 315100, P.R. China
| | - Wei Li
- Zhejiang Key Laboratory of Aquatic Germplasm Resources, College of Biological & Environmental Sciences, Zhejiang Wanli University, Ningbo, Zhejiang, 315100, P.R. China
| | - Chenghua Li
- School of Marine Scienes, Ningbo University, Ningbo, Zhejiang, 315010, P.R. China
| | - Zhihua Lin
- Zhejiang Key Laboratory of Aquatic Germplasm Resources, College of Biological & Environmental Sciences, Zhejiang Wanli University, Ningbo, Zhejiang, 315100, P.R. China
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27
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Hasan MK, Liu C, Wang F, Ahammed GJ, Zhou J, Xu MX, Yu JQ, Xia XJ. Glutathione-mediated regulation of nitric oxide, S-nitrosothiol and redox homeostasis confers cadmium tolerance by inducing transcription factors and stress response genes in tomato. CHEMOSPHERE 2016; 161:536-545. [PMID: 27472435 DOI: 10.1016/j.chemosphere.2016.07.053] [Citation(s) in RCA: 71] [Impact Index Per Article: 8.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/05/2016] [Revised: 06/30/2016] [Accepted: 07/16/2016] [Indexed: 05/12/2023]
Abstract
Glutathione (GSH) plays a critical role in plant growth, development and responses to stress. However, the mechanism by which GSH regulates tolerance to cadmium (Cd) stress still remains unclear. Here we show that inhibition of GSH biosynthesis by buthionine sulfoximine (BSO) aggravated Cd toxicity by increasing accumulation of reactive oxygen species (ROS) and reducing contents of nitric oxide (NO) and S-nitrosothiol (SNO) in tomato roots. In contrast, exogenous GSH alleviated Cd toxicity by substantially minimizing ROS accumulation and increasing contents of NO and SNO, and activities of antioxidant enzymes that eventually reduced oxidative stress. GSH-induced enhancement in Cd tolerance was closely associated with the upregulation of transcripts of several transcription factors such as ETHYLENE RESPONSIVE TRANSCRIPTION FACTOR 1 (ERF1), ERF2, MYB1 TRANSCRIPTION FACTOR- AIM1 and R2R3-MYB TRANSCRIPTION FACTOR- AN2, and some stress response genes. In addition, GSH modulated the cellular redox balance through maintaining increased GSH: GSSG and AsA: DHA ratios, and also increased phytochelatins contents. Nonetheless, GSH-induced alleviation of Cd phytotoxicity was also associated with increased sequestration of Cd into cell walls and vacuoles but not with Cd accumulation. Under Cd stress, while treatment with BSO slightly decreased vacuolar fraction of Cd, combined treatment with BSO and GSH noticeably increased that fraction. Our results suggest that GSH increases tomato tolerance to Cd stress not only by promoting the chelation and sequestration of Cd but also by stimulating NO, SNO and the antioxidant system through a redox-dependent mechanism.
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Affiliation(s)
- Md Kamrul Hasan
- Department of Horticulture, Zijingang Campus, Zhejiang University, Hangzhou 310058, PR China
| | - Congcong Liu
- Department of Horticulture, Zijingang Campus, Zhejiang University, Hangzhou 310058, PR China
| | - Fanan Wang
- Department of Horticulture, Zijingang Campus, Zhejiang University, Hangzhou 310058, PR China
| | - Golam Jalal Ahammed
- Department of Horticulture, Zijingang Campus, Zhejiang University, Hangzhou 310058, PR China.
| | - Jie Zhou
- Department of Horticulture, Zijingang Campus, Zhejiang University, Hangzhou 310058, PR China
| | - Ming-Xing Xu
- Geological Research Center for Agricultural Applications, China Geological Survey, Xiaojin Road 508, Hangzhou 311203, PR China; Zhejiang Institute of Geological Survey, Xiaojin Road 508, Hangzhou 311203, PR China.
| | - Jing-Quan Yu
- Department of Horticulture, Zijingang Campus, Zhejiang University, Hangzhou 310058, PR China; Zhejiang Provincial Key Laboratory of Horticultural Plant Integrative Biology, 866 Yuhangtang Road, Hangzhou 310058, PR China; Key Laboratory of Horticultural Plants Growth, Development and Quality Improvement, Agricultural Ministry of China, Hangzhou 310058, PR China
| | - Xiao-Jian Xia
- Department of Horticulture, Zijingang Campus, Zhejiang University, Hangzhou 310058, PR China.
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García-García JD, Sánchez-Thomas R, Moreno-Sánchez R. Bio-recovery of non-essential heavy metals by intra- and extracellular mechanisms in free-living microorganisms. Biotechnol Adv 2016; 34:859-873. [PMID: 27184302 DOI: 10.1016/j.biotechadv.2016.05.003] [Citation(s) in RCA: 48] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/27/2015] [Revised: 05/10/2016] [Accepted: 05/12/2016] [Indexed: 01/29/2023]
Abstract
Free-living microorganisms may become suitable models for recovery of non-essential and essential heavy metals from wastewater bodies and soils by using and enhancing their accumulating and/or leaching abilities. This review analyzes the variety of different mechanisms developed mainly in bacteria, protists and microalgae to accumulate heavy metals, being the most relevant those involving phytochelatin and metallothionein biosyntheses; phosphate/polyphosphate metabolism; compartmentalization of heavy metal-complexes into vacuoles, chloroplasts and mitochondria; and secretion of malate and other organic acids. Cyanide biosynthesis for extra-cellular heavy metal bioleaching is also examined. These metabolic/cellular processes are herein analyzed at the transcriptional, kinetic and metabolic levels to provide mechanistic basis for developing genetically engineered microorganisms with greater capacities and efficiencies for heavy metal recovery, recycling of heavy metals, biosensing of metal ions, and engineering of metalloenzymes.
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Affiliation(s)
- Jorge D García-García
- Departamento de Bioquímica, Instituto Nacional de Cardiología "Ignacio Chávez", México D.F. 14080, México.
| | - Rosina Sánchez-Thomas
- Departamento de Bioquímica, Instituto Nacional de Cardiología "Ignacio Chávez", México D.F. 14080, México
| | - Rafael Moreno-Sánchez
- Departamento de Bioquímica, Instituto Nacional de Cardiología "Ignacio Chávez", México D.F. 14080, México
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29
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Kalloniati C, Krompas P, Karalias G, Udvardi MK, Rennenberg H, Herschbach C, Flemetakis E. Nitrogen-Fixing Nodules Are an Important Source of Reduced Sulfur, Which Triggers Global Changes in Sulfur Metabolism in Lotus japonicus. THE PLANT CELL 2015; 27:2384-400. [PMID: 26296963 PMCID: PMC4815097 DOI: 10.1105/tpc.15.00108] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/05/2015] [Revised: 07/20/2015] [Accepted: 08/03/2015] [Indexed: 05/09/2023]
Abstract
We combined transcriptomic and biochemical approaches to study rhizobial and plant sulfur (S) metabolism in nitrogen (N) fixing nodules (Fix(+)) of Lotus japonicus, as well as the link of S-metabolism to symbiotic nitrogen fixation and the effect of nodules on whole-plant S-partitioning and metabolism. Our data reveal that N-fixing nodules are thiol-rich organs. Their high adenosine 5'-phosphosulfate reductase activity and strong (35)S-flux into cysteine and its metabolites, in combination with the transcriptional upregulation of several rhizobial and plant genes involved in S-assimilation, highlight the function of nodules as an important site of S-assimilation. The higher thiol content observed in nonsymbiotic organs of N-fixing plants in comparison to uninoculated plants could not be attributed to local biosynthesis, indicating that nodules are an important source of reduced S for the plant, which triggers whole-plant reprogramming of S-metabolism. Enhanced thiol biosynthesis in nodules and their impact on the whole-plant S-economy are dampened in plants nodulated by Fix(-) mutant rhizobia, which in most respects metabolically resemble uninoculated plants, indicating a strong interdependency between N-fixation and S-assimilation.
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Affiliation(s)
- Chrysanthi Kalloniati
- Department of Biotechnology, Agricultural University of Athens, 11855 Athens, Greece
| | - Panagiotis Krompas
- Department of Biotechnology, Agricultural University of Athens, 11855 Athens, Greece
| | - Georgios Karalias
- Department of Biotechnology, Agricultural University of Athens, 11855 Athens, Greece
| | - Michael K Udvardi
- Plant Biology Division, The Samuel Roberts Noble Foundation, Ardmore, Oklahoma 73401
| | - Heinz Rennenberg
- Institute of Forest Sciences, Chair of Tree Physiology, Faculty of Environment and Natural Resources, Albert-Ludwigs-University Freiburg, 79110 Freiburg, Germany College of Science, King Saud University, Riyadh 11451, Saudi Arabia
| | - Cornelia Herschbach
- Institute of Forest Sciences, Chair of Tree Physiology, Faculty of Environment and Natural Resources, Albert-Ludwigs-University Freiburg, 79110 Freiburg, Germany
| | - Emmanouil Flemetakis
- Department of Biotechnology, Agricultural University of Athens, 11855 Athens, Greece
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Weckopp SC, Kopriva S. Are changes in sulfate assimilation pathway needed for evolution of C4 photosynthesis? FRONTIERS IN PLANT SCIENCE 2015; 5:773. [PMID: 25628630 PMCID: PMC4292454 DOI: 10.3389/fpls.2014.00773] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/28/2014] [Accepted: 12/15/2014] [Indexed: 05/21/2023]
Abstract
C4 photosynthesis characteristically features a cell-specific localization of enzymes involved in CO2 assimilation in bundle sheath cells (BSC) or mesophyll cells. Interestingly, enzymes of sulfur assimilation are also specifically present in BSC of maize and many other C4 species. This localization, however, could not be confirmed in C4 species of the genus Flaveria. It was, therefore, concluded that the bundle sheath localization of sulfate assimilation occurs only in C4 monocots. However, recently the sulfate assimilation pathway was found coordinately enriched in BSC of Arabidopsis, opening new questions about the significance of such cell-specific localization of the pathway. In addition, next generation sequencing revealed expression gradients of many genes from C3 to C4 species and mathematical modeling proposed a sequence of adaptations during the evolutionary path from C3 to C4. Indeed, such gradient, with higher expression of genes for sulfate reduction in C4 species, has been observed within the genus Flaveria. These new tools provide the basis for reexamining the intriguing question of compartmentalization of sulfur assimilation. Therefore, this review summarizes the findings on spatial separation of sulfur assimilation in C4 plants and Arabidopsis, assesses the information on sulfur assimilation provided by the recent transcriptomics data and discusses their possible impact on understanding this interesting feature of plant sulfur metabolism to find out whether changes in sulfate assimilation are part of a general evolutionary trajectory toward C4 photosynthesis.
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Affiliation(s)
| | - Stanislav Kopriva
- Botanical Institute and Cluster of Excellence on Plant Sciences, Cologne Biocenter, University of Cologne, Cologne, Germany
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He J, Li H, Ma C, Zhang Y, Polle A, Rennenberg H, Cheng X, Luo ZB. Overexpression of bacterial γ-glutamylcysteine synthetase mediates changes in cadmium influx, allocation and detoxification in poplar. THE NEW PHYTOLOGIST 2015; 205:240-54. [PMID: 25229726 DOI: 10.1111/nph.13013] [Citation(s) in RCA: 116] [Impact Index Per Article: 12.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/27/2014] [Accepted: 07/23/2014] [Indexed: 05/08/2023]
Abstract
Overexpression of bacterial γ-glutamylcysteine synthetase in the cytosol of Populus tremula × P. alba produces higher glutathione (GSH) concentrations in leaves, thereby indicating the potential for cadmium (Cd) phytoremediation. However, the net Cd(2+) influx in association with H(+) /Ca(2+) , Cd tolerance, and the underlying molecular and physiological mechanisms are uncharacterized in these poplars. We assessed net Cd(2+) influx, Cd tolerance and the transcriptional regulation of several genes involved in Cd(2+) transport and detoxification in wild-type and transgenic poplars. Poplars exhibited highest net Cd(2+) influxes into roots at pH 5.5 and 0.1 mM Ca(2+) . Transgenics had higher Cd(2+) uptake rates and elevated transcript levels of several genes involved in Cd(2+) transport and detoxification compared with wild-type poplars. Transgenics exhibited greater Cd accumulation in the aerial parts than wild-type plants in response to Cd(2+) exposure. Moreover, transgenic poplars had lower concentrations of O2 ˙(-) and H2 O2 ; higher concentrations of total thiols, GSH and oxidized GSH in roots and/or leaves; and stimulated foliar GSH reductase activity compared with wild-type plants. These results indicate that transgenics are more tolerant of 100 μM Cd(2+) than wild-type plants, probably due to the GSH-mediated induction of the transcription of genes involved in Cd(2+) transport and detoxification.
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Affiliation(s)
- Jiali He
- College of Life Sciences and State Key Laboratory of Crop Stress Biology in Arid Areas, Northwest A&F University, Yangling, Shaanxi, 712100, China; Department of Horticulture, Shenyang Agricultural University, Shenyang, 110866, China
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32
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Calderwood A, Morris RJ, Kopriva S. Predictive sulfur metabolism - a field in flux. FRONTIERS IN PLANT SCIENCE 2014; 5:646. [PMID: 25477892 PMCID: PMC4235266 DOI: 10.3389/fpls.2014.00646] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/24/2014] [Accepted: 11/02/2014] [Indexed: 05/08/2023]
Abstract
The key role of sulfur metabolites in response to biotic and abiotic stress in plants, as well as their importance in diet and health has led to a significant interest and effort in trying to understand and manipulate the production of relevant compounds. Metabolic engineering utilizes a set of theoretical tools to help rationally design modifications that enhance the production of a desired metabolite. Such approaches have proven their value in bacterial systems, however, the paucity of success stories to date in plants, suggests that challenges remain. Here, we review the most commonly used methods for understanding metabolic flux, focusing on the sulfur assimilatory pathway. We highlight known issues with both experimental and theoretical approaches, as well as presenting recent methods for integrating different modeling strategies, and progress toward an understanding of flux at the whole plant level.
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Affiliation(s)
| | - Richard J. Morris
- Department of Computational and Systems Biology, John Innes CentreNorwich, UK
| | - Stanislav Kopriva
- Botanical Institute and Cluster of Excellence on Plant Sciences, University of Cologne, Cologne BiocenterCologne, Germany
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33
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Chao DY, Baraniecka P, Danku J, Koprivova A, Lahner B, Luo H, Yakubova E, Dilkes B, Kopriva S, Salt DE. Variation in sulfur and selenium accumulation is controlled by naturally occurring isoforms of the key sulfur assimilation enzyme ADENOSINE 5'-PHOSPHOSULFATE REDUCTASE2 across the Arabidopsis species range. PLANT PHYSIOLOGY 2014; 166:1593-608. [PMID: 25245030 PMCID: PMC4226352 DOI: 10.1104/pp.114.247825] [Citation(s) in RCA: 38] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/02/2023]
Abstract
Natural variation allows the investigation of both the fundamental functions of genes and their role in local adaptation. As one of the essential macronutrients, sulfur is vital for plant growth and development and also for crop yield and quality. Selenium and sulfur are assimilated by the same process, and although plants do not require selenium, plant-based selenium is an important source of this essential element for animals. Here, we report the use of linkage mapping in synthetic F2 populations and complementation to investigate the genetic architecture of variation in total leaf sulfur and selenium concentrations in a diverse set of Arabidopsis (Arabidopsis thaliana) accessions. We identify in accessions collected from Sweden and the Czech Republic two variants of the enzyme ADENOSINE 5'-PHOSPHOSULFATE REDUCTASE2 (APR2) with strongly diminished catalytic capacity. APR2 is a key enzyme in both sulfate and selenate reduction, and its reduced activity in the loss-of-function allele apr2-1 and the two Arabidopsis accessions Hodonín and Shahdara leads to a lowering of sulfur flux from sulfate into the reduced sulfur compounds, cysteine and glutathione, and into proteins, concomitant with an increase in the accumulation of sulfate in leaves. We conclude from our observation, and the previously identified weak allele of APR2 from the Shahdara accession collected in Tadjikistan, that the catalytic capacity of APR2 varies by 4 orders of magnitude across the Arabidopsis species range, driving significant differences in sulfur and selenium metabolism. The selective benefit, if any, of this large variation remains to be explored.
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Affiliation(s)
- Dai-Yin Chao
- Institute of Biological and Environmental Sciences, University of Aberdeen, Aberdeen AB24 3UU, United Kingdom (D.-Y.C., J.D., D.E.S.);Department of Metabolic Biology, John Innes Centre, Norwich NR4 7UH, United Kingdom (P.B., A.K., S.K.); andDepartment of Horticulture and Landscape Architecture, Purdue University, West Lafayette, Indiana 47907 (B.L., H.L., E.Y., B.D.)
| | - Patrycja Baraniecka
- Institute of Biological and Environmental Sciences, University of Aberdeen, Aberdeen AB24 3UU, United Kingdom (D.-Y.C., J.D., D.E.S.);Department of Metabolic Biology, John Innes Centre, Norwich NR4 7UH, United Kingdom (P.B., A.K., S.K.); andDepartment of Horticulture and Landscape Architecture, Purdue University, West Lafayette, Indiana 47907 (B.L., H.L., E.Y., B.D.)
| | - John Danku
- Institute of Biological and Environmental Sciences, University of Aberdeen, Aberdeen AB24 3UU, United Kingdom (D.-Y.C., J.D., D.E.S.);Department of Metabolic Biology, John Innes Centre, Norwich NR4 7UH, United Kingdom (P.B., A.K., S.K.); andDepartment of Horticulture and Landscape Architecture, Purdue University, West Lafayette, Indiana 47907 (B.L., H.L., E.Y., B.D.)
| | - Anna Koprivova
- Institute of Biological and Environmental Sciences, University of Aberdeen, Aberdeen AB24 3UU, United Kingdom (D.-Y.C., J.D., D.E.S.);Department of Metabolic Biology, John Innes Centre, Norwich NR4 7UH, United Kingdom (P.B., A.K., S.K.); andDepartment of Horticulture and Landscape Architecture, Purdue University, West Lafayette, Indiana 47907 (B.L., H.L., E.Y., B.D.)
| | - Brett Lahner
- Institute of Biological and Environmental Sciences, University of Aberdeen, Aberdeen AB24 3UU, United Kingdom (D.-Y.C., J.D., D.E.S.);Department of Metabolic Biology, John Innes Centre, Norwich NR4 7UH, United Kingdom (P.B., A.K., S.K.); andDepartment of Horticulture and Landscape Architecture, Purdue University, West Lafayette, Indiana 47907 (B.L., H.L., E.Y., B.D.)
| | - Hongbing Luo
- Institute of Biological and Environmental Sciences, University of Aberdeen, Aberdeen AB24 3UU, United Kingdom (D.-Y.C., J.D., D.E.S.);Department of Metabolic Biology, John Innes Centre, Norwich NR4 7UH, United Kingdom (P.B., A.K., S.K.); andDepartment of Horticulture and Landscape Architecture, Purdue University, West Lafayette, Indiana 47907 (B.L., H.L., E.Y., B.D.)
| | - Elena Yakubova
- Institute of Biological and Environmental Sciences, University of Aberdeen, Aberdeen AB24 3UU, United Kingdom (D.-Y.C., J.D., D.E.S.);Department of Metabolic Biology, John Innes Centre, Norwich NR4 7UH, United Kingdom (P.B., A.K., S.K.); andDepartment of Horticulture and Landscape Architecture, Purdue University, West Lafayette, Indiana 47907 (B.L., H.L., E.Y., B.D.)
| | - Brian Dilkes
- Institute of Biological and Environmental Sciences, University of Aberdeen, Aberdeen AB24 3UU, United Kingdom (D.-Y.C., J.D., D.E.S.);Department of Metabolic Biology, John Innes Centre, Norwich NR4 7UH, United Kingdom (P.B., A.K., S.K.); andDepartment of Horticulture and Landscape Architecture, Purdue University, West Lafayette, Indiana 47907 (B.L., H.L., E.Y., B.D.)
| | - Stanislav Kopriva
- Institute of Biological and Environmental Sciences, University of Aberdeen, Aberdeen AB24 3UU, United Kingdom (D.-Y.C., J.D., D.E.S.);Department of Metabolic Biology, John Innes Centre, Norwich NR4 7UH, United Kingdom (P.B., A.K., S.K.); andDepartment of Horticulture and Landscape Architecture, Purdue University, West Lafayette, Indiana 47907 (B.L., H.L., E.Y., B.D.)
| | - David E Salt
- Institute of Biological and Environmental Sciences, University of Aberdeen, Aberdeen AB24 3UU, United Kingdom (D.-Y.C., J.D., D.E.S.);Department of Metabolic Biology, John Innes Centre, Norwich NR4 7UH, United Kingdom (P.B., A.K., S.K.); andDepartment of Horticulture and Landscape Architecture, Purdue University, West Lafayette, Indiana 47907 (B.L., H.L., E.Y., B.D.)
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Rennenberg H, Herschbach C. A detailed view on sulphur metabolism at the cellular and whole-plant level illustrates challenges in metabolite flux analyses. JOURNAL OF EXPERIMENTAL BOTANY 2014; 65:5711-24. [PMID: 25124317 DOI: 10.1093/jxb/eru315] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/20/2023]
Abstract
Understanding the dynamics of physiological process in the systems biology era requires approaches at the genome, transcriptome, proteome, and metabolome levels. In this context, metabolite flux experiments have been used in mapping metabolite pathways and analysing metabolic control. In the present review, sulphur metabolism was taken to illustrate current challenges of metabolic flux analyses. At the cellular level, restrictions in metabolite flux analyses originate from incomplete knowledge of the compartmentation network of metabolic pathways. Transport of metabolites through membranes is usually not considered in flux experiments but may be involved in controlling the whole pathway. Hence, steady-state and snapshot readings need to be expanded to time-course studies in combination with compartment-specific metabolite analyses. Because of species-specific differences, differences between tissues, and stress-related responses, the quantitative significance of different sulphur sinks has to be elucidated; this requires the development of methods for whole-sulphur metabolome approaches. Different cell types can contribute to metabolite fluxes to different extents at the tissue and organ level. Cell type-specific analyses are needed to characterize these contributions. Based on such approaches, metabolite flux analyses can be expanded to the whole-plant level by considering long-distance transport and, thus, the interaction of roots and the shoot in metabolite fluxes. However, whole-plant studies need detailed empirical and mathematical modelling that have to be validated by experimental analyses.
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Affiliation(s)
- Heinz Rennenberg
- Institute of Forest Sciences, Chair of Tree Physiology, University of Freiburg, Georges-Koehler-Allee 53, 79110 Freiburg, Germany Centre for Biosystems Analysis (ZBSA), University of Freiburg, Habsburgerstrasse 49, 79104 Freiburg, Germany
| | - Cornelia Herschbach
- Institute of Forest Sciences, Chair of Tree Physiology, University of Freiburg, Georges-Koehler-Allee 53, 79110 Freiburg, Germany
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Koprivova A, Harper AL, Trick M, Bancroft I, Kopriva S. Dissection of the control of anion homeostasis by associative transcriptomics in Brassica napus. PLANT PHYSIOLOGY 2014; 166:442-50. [PMID: 25049360 PMCID: PMC4149728 DOI: 10.1104/pp.114.239947] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/02/2023]
Abstract
To assess the variation in nutrient homeostasis in oilseed rape and to identify the genes responsible for this variation, we determined foliar anion levels in a diversity panel of Brassica napus accessions, 84 of which had been genotyped previously using messenger RNA sequencing. We applied associative transcriptomics to identify sequence polymorphisms linked to variation in nitrate, phosphate, or sulfate in these accessions. The analysis identified several hundred significant associations for each anion. Using functional annotation of Arabidopsis (Arabidopsis thaliana) homologs and available microarray data, we identified 60 candidate genes for controlling variation in the anion contents. To verify that these genes function in the control of nutrient homeostasis, we obtained Arabidopsis transfer DNA insertion lines for these candidates and tested them for the accumulation of nitrate, phosphate, and sulfate. Fourteen lines differed significantly in levels of the corresponding anions. Several of these genes have been shown previously to affect the accumulation of the corresponding anions in Arabidopsis mutants. These results thus confirm the power of associative transcriptomics in dissection of the genetic control of complex traits and present a set of candidate genes for use in the improvement of efficiency of B. napus mineral nutrition.
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Affiliation(s)
- Anna Koprivova
- John Innes Centre, Norwich Research Park, Norwich NR4 7UH, United Kingdom
| | - Andrea L Harper
- John Innes Centre, Norwich Research Park, Norwich NR4 7UH, United Kingdom
| | - Martin Trick
- John Innes Centre, Norwich Research Park, Norwich NR4 7UH, United Kingdom
| | - Ian Bancroft
- John Innes Centre, Norwich Research Park, Norwich NR4 7UH, United Kingdom
| | - Stanislav Kopriva
- John Innes Centre, Norwich Research Park, Norwich NR4 7UH, United Kingdom
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Hydrogen sulfide in plants: From dissipation of excess sulfur to signaling molecule. Nitric Oxide 2014; 41:72-8. [DOI: 10.1016/j.niox.2014.02.005] [Citation(s) in RCA: 139] [Impact Index Per Article: 13.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2013] [Revised: 02/11/2014] [Accepted: 02/17/2014] [Indexed: 11/21/2022]
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Koprivova A, Calderwood A, Lee BR, Kopriva S. Do PFT1 and HY5 interact in regulation of sulfate assimilation by light in Arabidopsis? FEBS Lett 2014; 588:1116-21. [DOI: 10.1016/j.febslet.2014.02.031] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/19/2013] [Revised: 02/11/2014] [Accepted: 02/12/2014] [Indexed: 01/10/2023]
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Koprivova A, Kopriva S. Molecular mechanisms of regulation of sulfate assimilation: first steps on a long road. FRONTIERS IN PLANT SCIENCE 2014; 5:589. [PMID: 25400653 PMCID: PMC4212615 DOI: 10.3389/fpls.2014.00589] [Citation(s) in RCA: 66] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/25/2014] [Accepted: 10/10/2014] [Indexed: 05/19/2023]
Abstract
The pathway of sulfate assimilation, which provides plants with the essential nutrient sulfur, is tightly regulated and coordinated with the demand for reduced sulfur. The responses of metabolite concentrations, enzyme activities and mRNA levels to various signals and environmental conditions have been well described for the pathway. However, only little is known about the molecular mechanisms of this regulation. To date, nine transcription factors have been described to control transcription of genes of sulfate uptake and assimilation. In addition, other levels of regulation contribute to the control of sulfur metabolism. Post-transcriptional regulation has been shown for sulfate transporters, adenosine 5'phosphosulfate reductase, and cysteine synthase. Several genes of the pathway are targets of microRNA miR395. In addition, protein-protein interaction is increasingly found in the center of various regulatory circuits. On top of the mechanisms of regulation of single genes, we are starting to learn more about mechanisms of adaptation, due to analyses of natural variation. In this article, the summary of different mechanisms of regulation will be accompanied by identification of the major gaps in knowledge and proposition of possible ways of filling them.
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Affiliation(s)
| | - Stanislav Kopriva
- *Correspondence: Stanislav Kopriva, Botanical Institute and Cluster of Excellence on Plant Sciences, Cologne Biocenter, University of Cologne, Zülpicher Straße 47b, 50674 Cologne, Germany e-mail:
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Koprivova A, Giovannetti M, Baraniecka P, Lee BR, Grondin C, Loudet O, Kopriva S. Natural variation in the ATPS1 isoform of ATP sulfurylase contributes to the control of sulfate levels in Arabidopsis. PLANT PHYSIOLOGY 2013; 163:1133-41. [PMID: 24027241 PMCID: PMC3813639 DOI: 10.1104/pp.113.225748] [Citation(s) in RCA: 42] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/29/2013] [Accepted: 09/10/2013] [Indexed: 05/18/2023]
Abstract
Sulfur is an essential macronutrient for all living organisms. Plants take up inorganic sulfate from the soil, reduce it, and assimilate it into bioorganic compounds, but part of this sulfate is stored in the vacuoles. In our first attempt to identify genes involved in the control of sulfate content in the leaves, we reported that a quantitative trait locus (QTL) for sulfate content in Arabidopsis (Arabidopsis thaliana) was underlain by the APR2 isoform of the key enzyme of sulfate assimilation, adenosine 5'-phosphosulfate reductase. To increase the knowledge of the control of this trait, we cloned a second QTL from the same analysis. Surprisingly, the gene underlying this QTL encodes the ATPS1 isoform of the enzyme ATP sulfurylase, which precedes adenosine 5'-phosphosulfate reductase in the sulfate assimilation pathway. Plants with the Bay allele of ATPS1 accumulate lower steady-state levels of ATPS1 transcript than those with the Sha allele, which leads to lower enzyme activity and, ultimately, the accumulation of sulfate. Our results show that the transcript variation is controlled in cis. Examination of ATPS1 sequences of Bay-0 and Shahdara identified two deletions in the first intron and immediately downstream the gene in Bay-0 shared with multiple other Arabidopsis accessions. The average ATPS1 transcript levels are lower in these accessions than in those without the deletions, while sulfate levels are significantly higher. Thus, sulfate content in Arabidopsis is controlled by two genes encoding subsequent enzymes in the sulfate assimilation pathway but using different mechanisms, variation in amino acid sequence and variation in expression levels.
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Traka MH, Saha S, Huseby S, Kopriva S, Walley PG, Barker GC, Moore J, Mero G, van den Bosch F, Constant H, Kelly L, Schepers H, Boddupalli S, Mithen RF. Genetic regulation of glucoraphanin accumulation in Beneforté broccoli. THE NEW PHYTOLOGIST 2013; 198:1085-1095. [PMID: 23560984 PMCID: PMC3666090 DOI: 10.1111/nph.12232] [Citation(s) in RCA: 53] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/18/2012] [Accepted: 02/09/2013] [Indexed: 05/07/2023]
Abstract
· Diets rich in broccoli (Brassica oleracea var italica) have been associated with maintenance of cardiovascular health and reduction in risk of cancer. These health benefits have been attributed to glucoraphanin that specifically accumulates in broccoli. The development of broccoli with enhanced concentrations of glucoraphanin may deliver greater health benefits. · Three high-glucoraphanin F1 broccoli hybrids were developed in independent programmes through genome introgression from the wild species Brassica villosa. Glucoraphanin and other metabolites were quantified in experimental field trials. Global SNP analyses quantified the differential extent of B. villosa introgression · The high-glucoraphanin broccoli hybrids contained 2.5-3 times the glucoraphanin content of standard hybrids due to enhanced sulphate assimilation and modifications in sulphur partitioning between sulphur-containing metabolites. All of the high-glucoraphanin hybrids possessed an introgressed B. villosa segment which contained a B. villosa Myb28 allele. Myb28 expression was increased in all of the high-glucoraphanin hybrids. Two high-glucoraphanin hybrids have been commercialised as Beneforté broccoli. · The study illustrates the translation of research on glucosinolate genetics from Arabidopsis to broccoli, the use of wild Brassica species to develop cultivars with potential consumer benefits, and the development of cultivars with contrasting concentrations of glucoraphanin for use in blinded human intervention studies.
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Affiliation(s)
- Maria H Traka
- Food & Health Programme, Institute of Food Research, Norwich Research Park, NR4 7UA, UK
| | - Shikha Saha
- Food & Health Programme, Institute of Food Research, Norwich Research Park, NR4 7UA, UK
| | - Stine Huseby
- Food & Health Programme, Institute of Food Research, Norwich Research Park, NR4 7UA, UK
- Metabolic Biology, John Innes Centre, Norwich Research Park, NR4 7UH, UK
| | - Stanislav Kopriva
- Metabolic Biology, John Innes Centre, Norwich Research Park, NR4 7UH, UK
| | - Peter G Walley
- Warwick Life Sciences, The University of Warwick, Wellesbourne, Warwick, CV35 9EF, UK
| | - Guy C Barker
- Warwick Life Sciences, The University of Warwick, Wellesbourne, Warwick, CV35 9EF, UK
| | - Jonathan Moore
- Warwick Systems Biology, The University of Warwick, Coventry, CV4 7AL, UK
| | - Gene Mero
- Seminis Vegetable Seeds, Inc., Arroyo Grande, CA, 93420, USA
| | - Frans van den Bosch
- Seminis Vegetable Seeds, Inc., Wageningse Afweg 31, 6702 PD, Wageningen, the Netherlands
| | - Howard Constant
- Monsanto Center for Food and Nutrition Research, Seminis Vegetable Seeds, Inc., Kannapolis, NC, 28081, USA
| | - Leo Kelly
- Seminis Vegetable Seeds, Inc., Woodland, CA, 95695, USA
| | - Hans Schepers
- Seminis Vegetable Seeds, Inc., Wageningse Afweg 31, 6702 PD, Wageningen, the Netherlands
| | | | - Richard F Mithen
- Food & Health Programme, Institute of Food Research, Norwich Research Park, NR4 7UA, UK
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Machado-Estrada B, Calderón J, Moreno-Sánchez R, Rodríguez-Zavala JS. Accumulation of arsenic, lead, copper, and zinc, and synthesis of phytochelatins by indigenous plants of a mining impacted area. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2013; 20:3946-3955. [PMID: 23649544 DOI: 10.1007/s11356-012-1344-8] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/22/2012] [Accepted: 11/16/2012] [Indexed: 06/02/2023]
Abstract
Several native plants, able to grow in an unconfined mining impacted area that is now in close vicinity with urban areas, were evaluated for their ability to accumulate heavy metals. The main soil contaminants were As, Pb, Cu, and Zn. Sampling of the rhizospheric metal polluted soil showed that Euphorbia prostrata Aiton, Parthenium incanum Kunth, and Zinnia acerosa (DC.) A. Gray were able to grow in the presence of high amounts of mixtures of these elements. The plants accumulated the metals in the above ground parts and increased the synthesis of thiol molecules. E. prostrata showed the highest capacity for accumulation of the mixture of elements (588 μg g DW(-1)). Analysis of the thiol-molecules profile showed that these plants synthesized high amounts of long-chain phytochelatins, accompanied by low amounts of monothiol molecules, which may be related to their higher resistance to As and heavy metals. The three plants showed translocation factors from roots to leaves >1 for As, Pb, Cu, and Zn. Thus, by periodically removing aerial parts, these plants could be useful for the phytoremediation of semi-arid and arid mining impacted areas, in which metal hyper-accumulator plants are not able to grow.
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Affiliation(s)
- Blenda Machado-Estrada
- Departamento de Toxicología Ambiental, Universidad Autónoma de San Luis Potosí, San Luis Potosí, México
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Hu B, Simon J, Rennenberg H. Drought and air warming affect the species-specific levels of stress-related foliar metabolites of three oak species on acidic and calcareous soil. TREE PHYSIOLOGY 2013; 33:489-504. [PMID: 23619385 DOI: 10.1093/treephys/tpt025] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/13/2023]
Abstract
Climate change as projected for Central Europe will lead to prolonged periods of summer drought and enhanced air temperature. Thus, forest management practices are required to take into account how species performance is adapted to cope with these climate changes. Oak trees may play a major role in future forests because of their relative drought-tolerance compared with other species like beech. Therefore, this study investigated the stress responses (i.e., anti-oxidants, free amino acids) in the leaves of three widely distributed oak species in Central Europe (i.e., Quercus robur L., Q. petraea [Matt.] Libel., Q. pubescens Willd.) to drought, air warming and the combination of drought plus air warming under controlled conditions after periods of spring drought, a short rewetting and summer drought. We quantified foliar levels of thiols, ascorbate, and free amino compounds in Q robur, Q. petraea and Q. pubescens. Our study showed that oak saplings had increased levels of γ-glutamylcysteine and total glutathione and proline with drought and air warming. Foliar ascorbate, glutathione disulfide and dehydroascorbic acid levels were not affected. The comparison of stress responses to drought and/or air warming between the three species showed higher foliar thiol levels in Q. robur and Q. pubescens compared with Q. petraea. For total and reduced ascorbic acid and γ-aminobutyric acid, the highest levels were found in Q. robur. In conclusion, our study showed that foliar anti-oxidant and free amino acid levels were significantly affected by drought plus air warming; however, this effect was species-dependent with the drought-tolerant species of Q. pubescens having the highest reactive oxygen species scavenging capacity among three tested oak species. Furthermore, stress responses as shown by increased levels of foliar anti-oxidants and free amino acids differ between calcareous and acidic soil indicating that the capacities of anti-oxidative defense and osmotic stress adjustment developed better on calcareous compared with acidic soil; however, this effect was metabolite- as well as species-specific.
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Affiliation(s)
- Bin Hu
- Institute of Forest Botany and Tree Physiology, Chair of Tree Physiology, University of Freiburg, Georges-Köhler-Allee 53/54, D - 79110 Freiburg, Germany
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Ciaffi M, Paolacci AR, Celletti S, Catarcione G, Kopriva S, Astolfi S. Transcriptional and physiological changes in the S assimilation pathway due to single or combined S and Fe deprivation in durum wheat (Triticum durum L.) seedlings. JOURNAL OF EXPERIMENTAL BOTANY 2013; 64:1663-75. [PMID: 23390290 PMCID: PMC3617832 DOI: 10.1093/jxb/ert027] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/18/2023]
Abstract
The effect of iron (Fe) and sulphur (S) deprivation on sulphate uptake and assimilation pathways was investigated in durum wheat by analysing the expression of genes coding for major transporters and enzymes involved in sulphate assimilation and reduction: high-affinity sulphate transporters (TdSultr1.1 and TdSultr1.3), ATP sulphurylase (TdATPSul1 and TdATPSul2), APS reductase (TdAPR), sulphite reductase (TdSiR), O-acetylserine(thiol)lyase (TdOASTL1 and TdOASTL2), and serine acetyltransferase (TdSAT1 and TdSAT2). Further experiments were carried out to detect changes in the activities of these enzymes, together with the evaluation of growth parameters (fresh biomass accumulation, leaf green values, and total S, thiol, and Fe concentrations). Fe shortage in wheat plants under adequate S nutrition resulted in an S deficiency-like response. Most of the genes of the S assimilatory pathway induced by S deprivation (TdATPSul1, TdAPR, TdSir, TdSAT1, and TdSAT2) were also significantly up-regulated after the imposition of the Fe limitation under S-sufficient conditions. However, the differential expression of genes encoding the two high-affinity transporters (TdSultr1.1 and TdSultr1.3) indicates that the mechanisms of sulphate uptake regulation under Fe and S deficiency are different in wheat. Moreover, it was observed that the mRNA level of genes encoding ATPS, APR, and OASTL and the corresponding enzyme activities were often uncoupled in response to Fe and S availability, indicating that most probably their regulation involves a complex interplay of transcriptional, translational, and/or post-translational mechanisms induced by S and/or Fe deficiency.
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Affiliation(s)
- Mario Ciaffi
- Department of Agriculture, Forests, Nature and Energy (DAFNE), University of Tuscia, 01100 Viterbo, Italy
| | - Anna Rita Paolacci
- Department of Agriculture, Forests, Nature and Energy (DAFNE), University of Tuscia, 01100 Viterbo, Italy
| | - Silvia Celletti
- Department of Agriculture, Forests, Nature and Energy (DAFNE), University of Tuscia, 01100 Viterbo, Italy
| | - Giulio Catarcione
- Department of Agriculture, Forests, Nature and Energy (DAFNE), University of Tuscia, 01100 Viterbo, Italy
| | - Stanislav Kopriva
- Department of Metabolic Biology, John Innes Centre, Norwich Research Park, Norwich NR4 7UH, UK
| | - Stefania Astolfi
- Department of Agriculture, Forests, Nature and Energy (DAFNE), University of Tuscia, 01100 Viterbo, Italy
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Chan KX, Wirtz M, Phua SY, Estavillo GM, Pogson BJ. Balancing metabolites in drought: the sulfur assimilation conundrum. TRENDS IN PLANT SCIENCE 2013; 18:18-29. [PMID: 23040678 DOI: 10.1016/j.tplants.2012.07.005] [Citation(s) in RCA: 110] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/27/2012] [Revised: 07/27/2012] [Accepted: 07/30/2012] [Indexed: 05/18/2023]
Abstract
A key plant response to drought is the accumulation of specific sets of metabolites that act as osmoprotectants, osmolytes, antioxidants, and/or stress signals. An emerging question is: how do plants regulate metabolism to balance the 'competing interests' between metabolites during stress? Recent research connects primary sulfur metabolism (e.g., sulfate transport in the vasculature, its assimilation in leaves, and the recycling of sulfur-containing compounds) with the drought stress response. In this review, we highlight key steps in sulfur metabolism that play significant roles in drought stress signaling and responses. We propose that a complex balancing act is required to coordinate primary and secondary sulfur metabolism during the drought stress response in plants.
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Affiliation(s)
- Kai Xun Chan
- ARC Centre of Excellence in Plant Energy Biology, Research School of Biology, The Australian National University, Canberra, ACT 0200, Australia
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Schiavon M, Galla G, Wirtz M, Pilon-Smits EAH, Telatin V, Quaggiotti S, Hell R, Barcaccia G, Malagoli M. Transcriptome profiling of genes differentially modulated by sulfur and chromium identifies potential targets for phytoremediation and reveals a complex S-Cr interplay on sulfate transport regulation in B. juncea. JOURNAL OF HAZARDOUS MATERIALS 2012; 239-240:192-205. [PMID: 22995205 DOI: 10.1016/j.jhazmat.2012.08.060] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/24/2012] [Revised: 08/13/2012] [Accepted: 08/25/2012] [Indexed: 06/01/2023]
Abstract
A differential display cDNA-AFLP derived technique was used to identify gene transcripts regulated by chromium (Cr) in relation to sulfur (S) nutrition in Brassica juncea. Twelve-day old plants were grown with 200 μM sulfate (+S), without sulfate (-S), with 200 μM sulfate plus 200 μM chromate (+S+Cr), or without sulfate plus 200 μM chromate (-S+Cr). Forty-four combinations of degenerate primers were assayed, which allowed the detection of 346 Transcript-Derived Fragments (TDFs) differentially regulated by Cr and S at times 0, 10 min, 1 h, 24 h. Eight sulfate transporters were identified, whose transcript abundance was dependent on the levels of plant S-compounds. For some of these transporters, a tight coordinated regulation of gene expression was observed in response to Cr. The MapMan analysis revealed a differential pattern of gene expression between +S+Cr and -S+Cr plants for several other transcripts and highlighted an overlap among responses to metals, defence against pathogens and senescence, hence suggesting the existence of common mechanisms of gene regulation. Among the identified gene transcripts, those involved in S metabolism and proteolitic processes may represent potential targets of genetic engineering in efforts to increase Cr accumulation and tolerance in plant species employed in phytoremediation techniques.
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Affiliation(s)
- Michela Schiavon
- DAFNAE, University of Padova, Agripolis, 35020 Legnaro PD, Italy
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Ravilious GE, Jez JM. Nucleotide binding site communication in Arabidopsis thaliana adenosine 5'-phosphosulfate kinase. J Biol Chem 2012; 287:30385-94. [PMID: 22810229 DOI: 10.1074/jbc.m112.387001] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022] Open
Abstract
Adenosine 5'-phosphosulfate kinase (APSK) catalyzes the ATP-dependent synthesis of adenosine 3'-phosphate 5'-phosphosulfate (PAPS), which is an essential metabolite for sulfur assimilation in prokaryotes and eukaryotes. Using APSK from Arabidopsis thaliana, we examine the energetics of nucleotide binary and ternary complex formation and probe active site features that coordinate the order of ligand addition. Calorimetric analysis shows that binding can occur first at either nucleotide site, but that initial interaction at the ATP/ADP site was favored and enhanced affinity for APS in the second site by 50-fold. The thermodynamics of the two possible binding models (i.e. ATP first versus APS first) differs and implies that active site structural changes guide the order of nucleotide addition. The ligand binding analysis also supports an earlier suggestion of intermolecular interactions in the dimeric APSK structure. Crystallographic, site-directed mutagenesis, and energetic analyses of oxyanion recognition by the P-loop in the ATP/ADP binding site and the role of Asp(136), which bridges the ATP/ADP and APS/PAPS binding sites, suggest how the ordered nucleotide binding sequence and structural changes are dynamically coordinated for catalysis.
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Lee BR, Huseby S, Koprivova A, Chételat A, Wirtz M, Mugford ST, Navid E, Brearley C, Saha S, Mithen R, Hell R, Farmer EE, Kopriva S. Effects of fou8/fry1 mutation on sulfur metabolism: is decreased internal sulfate the trigger of sulfate starvation response? PLoS One 2012; 7:e39425. [PMID: 22724014 PMCID: PMC3377649 DOI: 10.1371/journal.pone.0039425] [Citation(s) in RCA: 47] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/13/2012] [Accepted: 05/21/2012] [Indexed: 12/30/2022] Open
Abstract
The fou8 loss of function allele of adenosine bisphosphate phosphatase FIERY1 results in numerous phenotypes including the increased enzymatic oxygenation of fatty acids and increased jasmonate synthesis. Here we show that the mutation causes also profound alterations of sulfur metabolism. The fou8 mutants possess lower levels of sulfated secondary compounds, glucosinolates, and accumulate the desulfo-precursors similar to previously described mutants in adenosine 5′phosphosulfate kinase. Transcript levels of genes involved in sulfate assimilation differ in fou8 compared to wild type Col-0 plants and are similar to plants subjected to sulfate deficiency. Indeed, independent microarray analyses of various alleles of mutants in FIERY1 showed similar patterns of gene expression as in sulfate deficient plants. This was not caused by alterations in signalling, as the fou8 mutants contained significantly lower levels of sulfate and glutathione and, consequently, of total elemental sulfur. Analysis of mutants with altered levels of sulfate and glutathione confirmed the correlation of sulfate deficiency-like gene expression pattern with low internal sulfate but not low glutathione. The changes in sulfur metabolism in fou8 correlated with massive increases in 3′-phosphoadenosine 5′-phosphate levels. The analysis of fou8 thus revealed that sulfate starvation response is triggered by a decrease in internal sulfate as opposed to external sulfate availability and that the presence of desulfo-glucosinolates does not induce the glucosinolate synthesis network. However, as well as resolving these important questions on the regulation of sulfate assimilation in plants, fou8 has also opened an array of new questions on the links between jasmonate synthesis and sulfur metabolism.
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Affiliation(s)
- Bok-Rye Lee
- John Innes Centre, Norwich Research Park, Norwich, United Kingdom
| | - Stine Huseby
- John Innes Centre, Norwich Research Park, Norwich, United Kingdom
- Department of Plant- and Environmental Sciences, Norwegian University of Life Sciences, Aas, Norway
| | - Anna Koprivova
- John Innes Centre, Norwich Research Park, Norwich, United Kingdom
| | - Aurore Chételat
- Department of Plant Molecular Biology, University of Lausanne, Lausanne, Switzerland
| | - Markus Wirtz
- Heidelberg Institute for Plant Sciences (HIP), Im Neuenheimer Feld 360, Heidelberg, Germany
| | - Sam T. Mugford
- John Innes Centre, Norwich Research Park, Norwich, United Kingdom
| | - Emily Navid
- Department of Plant Molecular Biology, University of Lausanne, Lausanne, Switzerland
| | - Charles Brearley
- University of East Anglia, School of Biological Sciences, Norfolk, United Kingdom
| | - Shikha Saha
- Institute of Food Research, Norwich Research Park, Norwich, United Kingdom
| | - Richard Mithen
- Institute of Food Research, Norwich Research Park, Norwich, United Kingdom
| | - Rüdiger Hell
- Heidelberg Institute for Plant Sciences (HIP), Im Neuenheimer Feld 360, Heidelberg, Germany
| | - Edward E. Farmer
- Department of Plant Molecular Biology, University of Lausanne, Lausanne, Switzerland
| | - Stanislav Kopriva
- John Innes Centre, Norwich Research Park, Norwich, United Kingdom
- * E-mail:
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48
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Giraud E, Ivanova A, Gordon CS, Whelan J, Considine MJ. Sulphur dioxide evokes a large scale reprogramming of the grape berry transcriptome associated with oxidative signalling and biotic defence responses. PLANT, CELL & ENVIRONMENT 2012; 35:405-417. [PMID: 21689113 DOI: 10.1111/j.1365-3040.2011.02379.x] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/30/2023]
Abstract
The grape and wine industries are heavily reliant on sulphite preservatives. However, the view that sulphites act directly on bacterial and fungal pathogens may be simplistic. Mechanisms of sulphur-enhanced defences are largely unknown; many sulphur-rich compounds enhance plant defences and sulphite can also have oxidative consequences via production of H(2)O(2) or sulphitolysis. To investigate the effects of sulphur dioxide (SO(2) ) on fresh table grapes (Vitis vinifera L. 'Crimson Seedless'), transcriptome analysis was carried out on berries treated with SO(2) under commercial conditions for 21 d. We found a broad perturbation of metabolic processes, consistent with a large-scale stress response. Transcripts encoding putative sulphur-metabolizing enzymes indicated that sulphite was directed towards chelation and conjugation, and away from oxidation to sulphate. The results indicated that redox poise was altered dramatically by SO(2) treatment, evidenced by alterations in plastid and mitochondrial alternative electron transfer pathways, up-regulation of fermentation transcripts and numerous glutathione S-transferases, along with a down-regulation of components involved in redox homeostasis. Features of biotic stress were up-regulated, notably signalling via auxin, ethylene and jasmonates. Taken together, this inventory of transcriptional responses is consistent with a long-term cellular response to oxidative stress, similar to the effects of reactive oxygen species.
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Affiliation(s)
- Estelle Giraud
- Australian Research Council Centre of Excellence in Plant Energy Biology, University of Western Australia, M316 Crawley, Western Australia 6009, Australia
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49
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Lehmann M, Laxa M, Sweetlove LJ, Fernie AR, Obata T. Metabolic recovery of Arabidopsis thaliana roots following cessation of oxidative stress. Metabolomics 2012; 8:143-153. [PMID: 22279429 PMCID: PMC3258409 DOI: 10.1007/s11306-011-0296-1] [Citation(s) in RCA: 42] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 12/16/2010] [Accepted: 02/28/2011] [Indexed: 12/20/2022]
Abstract
To cope with the various environmental stresses resulting in reactive oxygen species (ROS) production plant metabolism is known to be altered specifically under different stresses. After overcoming the stress the metabolism should be reconfigured to recover basal operation however knowledge concerning how this is achieved is cursory. To investigate the metabolic recovery of roots following oxidative stress, changes in metabolite abundance and carbon flow were analysed. Arabidopsis roots were treated by menadione to elicit oxidative stress. Roots were fed with (13)C labelled glucose and the redistribution of isotope was determined in order to study carbon flow. The label redistribution through many pathways such as glycolysis, the tricarboxylic acid (TCA) cycle and amino acid metabolism were reduced under oxidative stress. After menadione removal many of the stress-related changes reverted back to basal levels. Decreases in amounts of hexose phosphates, malate, 2-oxoglutarate, glutamate and aspartate were fully recovered or even increased to above the control level. However, some metabolites such as pentose phosphates and citrate did not recover but maintained their levels or even increased further. The alteration in label redistribution largely correlated with that in metabolite abundance. Glycolytic carbon flow reverted to the control level only 18 h after menadione removal although the TCA cycle and some amino acids such as aspartate and glutamate took longer to recover. Taken together, plant root metabolism was demonstrated to be able to overcome menadione-induced oxidative stress with the differential time period required by independent pathways suggestive of the involvement of pathway specific regulatory processes. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1007/s11306-011-0296-1) contains supplementary material, which is available to authorized users.
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Affiliation(s)
- Martin Lehmann
- Max-Planck-Institute of Molecular Plant Physiology, Am Mühlenberg 1, 14476 Potsdam-Golm, Germany
| | - Miriam Laxa
- Department of Plant Sciences, University of Oxford, South Parks Road, Oxford, OX1 3RB UK
| | - Lee J. Sweetlove
- Department of Plant Sciences, University of Oxford, South Parks Road, Oxford, OX1 3RB UK
| | - Alisdair R. Fernie
- Max-Planck-Institute of Molecular Plant Physiology, Am Mühlenberg 1, 14476 Potsdam-Golm, Germany
| | - Toshihiro Obata
- Max-Planck-Institute of Molecular Plant Physiology, Am Mühlenberg 1, 14476 Potsdam-Golm, Germany
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50
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Kopriva S, Mugford SG, Baraniecka P, Lee BR, Matthewman CA, Koprivova A. Control of sulfur partitioning between primary and secondary metabolism in Arabidopsis. FRONTIERS IN PLANT SCIENCE 2012; 3:163. [PMID: 22833750 PMCID: PMC3400089 DOI: 10.3389/fpls.2012.00163] [Citation(s) in RCA: 34] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/21/2012] [Accepted: 07/02/2012] [Indexed: 05/19/2023]
Abstract
Sulfur is an essential nutrient for all organisms. Plants are able to take up inorganic sulfate and assimilate it into a range of bio-organic molecules either after reduction to sulfide or activation to 3'-phosphoadenosine 5'-phosphosulfate. While the regulation of the reductive part of sulfate assimilation and the synthesis of cysteine has been studied extensively in the past three decades, much less attention has been paid to the control of synthesis of sulfated compounds. Only recently the genes and enzymes activating sulfate and transferring it onto suitable acceptors have been investigated in detail with emphasis on understanding the diversity of the sulfotransferase gene family and the control of partitioning of sulfur between the two branches of sulfate assimilation. Here, the recent progress in our understanding of these processes will be summarized.
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Affiliation(s)
- Stanislav Kopriva
- *Correspondence: Stanislav Kopriva, Department of Metabolic Biology, John Innes Centre, Norwich Research Park, Norwich NR4 7UH, UK. e-mail:
| | | | | | - Bok-Rye Lee
- †Present address: Bok-Rye Lee, Department of Biochemistry and Molecular Biology, Michigan State University, 209 Biochemistry Building, East Lansing, MI 48824-1319, USA
| | - Colette A. Matthewman
- †Present address: Bok-Rye Lee, Department of Biochemistry and Molecular Biology, Michigan State University, 209 Biochemistry Building, East Lansing, MI 48824-1319, USA
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