1
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Neugart S, Steininger V, Fernandes C, Martínez-Abaigar J, Núñez-Olivera E, Schreiner M, Strid Å, Viczián A, Albert A, Badenes-Pérez FR, Castagna A, Dáder B, Fereres A, Gaberscik A, Gulyás Á, Gwynn-Jones D, Nagy F, Jones A, Julkunen-Tiitto R, Konstantinova N, Lakkala K, Llorens L, Martínez-Lüscher J, Nybakken L, Olsen J, Pascual I, Ranieri A, Regier N, Robson M, Rosenqvist E, Santin M, Turunen M, Vandenbussche F, Verdaguer D, Winkler B, Witzel K, Grifoni D, Zipoli G, Hideg É, Jansen MAK, Hauser MT. A synchronized, large-scale field experiment using Arabidopsis thaliana reveals the significance of the UV-B photoreceptor UVR8 under natural conditions. PLANT, CELL & ENVIRONMENT 2024. [PMID: 38881245 DOI: 10.1111/pce.15008] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/05/2024] [Revised: 06/03/2024] [Accepted: 06/06/2024] [Indexed: 06/18/2024]
Abstract
This study determines the functional role of the plant ultraviolet-B radiation (UV-B) photoreceptor, UV RESISTANCE LOCUS 8 (UVR8) under natural conditions using a large-scale 'synchronized-genetic-perturbation-field-experiment'. Laboratory experiments have demonstrated a role for UVR8 in UV-B responses but do not reflect the complexity of outdoor conditions where 'genotype × environment' interactions can mask laboratory-observed responses. Arabidopsis thaliana knockout mutant, uvr8-7, and the corresponding Wassilewskija wild type, were sown outdoors on the same date at 21 locations across Europe, ranging from 39°N to 67°N latitude. Growth and climatic data were monitored until bolting. At the onset of bolting, rosette size, dry weight, and phenolics and glucosinolates were quantified. The uvr8-7 mutant developed a larger rosette and contained less kaempferol glycosides, quercetin glycosides and hydroxycinnamic acid derivatives than the wild type across all locations, demonstrating a role for UVR8 under field conditions. UV effects on rosette size and kaempferol glycoside content were UVR8 dependent, but independent of latitude. In contrast, differences between wild type and uvr8-7 in total quercetin glycosides, and the quercetin-to-kaempferol ratio decreased with increasing latitude, that is, a more variable UV response. Thus, the large-scale synchronized approach applied demonstrates a location-dependent functional role of UVR8 under natural conditions.
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Affiliation(s)
- Susanne Neugart
- Division Quality and Sensory of Plant Products, Georg-August-Universität Göttingen, Göttingen, Germany
| | - Viktoria Steininger
- Department of Applied Genetics & Cell Biology, University of Natural Resources & Life Sciences, Vienna, Austria
| | - Catarina Fernandes
- Department of Applied Genetics & Cell Biology, University of Natural Resources & Life Sciences, Vienna, Austria
| | | | | | - Monika Schreiner
- Leibniz Institute of Vegetable and Ornamental Crops, Großbeeren, Germany
| | - Åke Strid
- Department of Natural Sciences, School of Science and Technology, Örebro University, Örebro, Sweden
| | - András Viczián
- Institute of Plant Biology, HUN-REN Biological Research Centre, Szeged, Hungary
| | - Andreas Albert
- Research Unit Environmental Simulation, Helmholtz Zentrum München, Neuherberg, Germany
| | | | - Antonella Castagna
- Department of Agriculture, Food and Environment, University of Pisa, Pisa, Italy
| | - Beatriz Dáder
- Department of Agricultural Production, ETSIAAB, Universidad Politécnica de Madrid, Madrid, Spain
| | - Alberto Fereres
- Institute of Agricultural Sciences, Spanish Council for Scientific Research, Madrid, Spain
| | - Alenka Gaberscik
- Department of Biology, University of Ljubljana, Ljubljana, Slovenia
| | - Ágnes Gulyás
- Department of Climatology and Landscape Ecology, University of Szeged, Szeged, Hungary
| | - Dylan Gwynn-Jones
- Department of Life Sciences, Aberystwyth University, Aberystwyth, UK
| | - Ferenc Nagy
- Institute of Plant Biology, HUN-REN Biological Research Centre, Szeged, Hungary
| | - Alan Jones
- Earthwatch Europe, Oxford, UK
- Scion, New Zealand Forest Research Institute, Rotorua, New Zealand
| | | | - Nataliia Konstantinova
- Department of Applied Genetics & Cell Biology, University of Natural Resources & Life Sciences, Vienna, Austria
| | - Kaisa Lakkala
- Finnish Meteorological Institute - Space and Earth Observation Centre, Sodankylä, Finland
| | - Laura Llorens
- Department of Environmental Sciences, University of Girona, Girona, Spain
| | - Johann Martínez-Lüscher
- Plant Stress Physiology group (Associated Unit to EEAD, CSIC), BIOMA Institute for Biodiversity and the Environment, University of Navarra, Pamplona, Spain
| | - Line Nybakken
- Faculty of Environmental Sciences and Natural Resource Management, Norwegian University of Life Sciences, Ås, Norway
| | - Jorunn Olsen
- Department of Plant Sciences, Norwegian University of Life Sciences, Ås, Norway
| | - Inmaculada Pascual
- Plant Stress Physiology group (Associated Unit to EEAD, CSIC), BIOMA Institute for Biodiversity and the Environment, University of Navarra, Pamplona, Spain
| | - Annamaria Ranieri
- Department of Agriculture, Food and Environment, University of Pisa, Pisa, Italy
| | - Nicole Regier
- Earth and Environment Sciences, Forel Institute, Geneva University, Geneva, Switzerland
| | - Matthew Robson
- Organismal & Evolutionary Biology (OEB), Viikki Plant Science Centre (ViPS), Faculty of Biological & Environmental Sciences, University of Helsinki, Helsinki, Finland
- National School of Forestry, University of Cumbria, Ambleside, UK
| | - Eva Rosenqvist
- Institute of Plant and Environmental Sciences, Crop Science, University of Copenhagen, Tåstrup, Denmark
| | - Marco Santin
- Department of Agriculture, Food and Environment, University of Pisa, Pisa, Italy
| | - Minna Turunen
- Arctic Centre, University of Lapland, Rovaniemi, Finland
| | | | - Dolors Verdaguer
- Department of Environmental Sciences, University of Girona, Girona, Spain
| | - Barbro Winkler
- Research Unit Environmental Simulation, Helmholtz Zentrum München, Neuherberg, Germany
| | - Katja Witzel
- Leibniz Institute of Vegetable and Ornamental Crops, Großbeeren, Germany
| | - Daniele Grifoni
- National Research Council, Institute of Bioeconomy, Sesto Fiorentino, Italy
- Laboratory of Monitoring and Environmental Modelling for the Sustainable Development (LaMMA Consortium), Sesto Fiorentino, Italy
| | - Gaetano Zipoli
- National Research Council Institute for Biometeorology, Sesto Fiorentino, Italy
| | - Éva Hideg
- Department of Plant Biology, Faculty of Sciences, University of Pécs, Pécs, Hungary
| | - Marcel A K Jansen
- Environmental Research Institute, School of Biological, Earth, and Environmental Sciences, University College Cork, Cork, Ireland
| | - Marie-Theres Hauser
- Department of Applied Genetics & Cell Biology, University of Natural Resources & Life Sciences, Vienna, Austria
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2
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Liu W, Giuriani G, Havlikova A, Li D, Lamont DJ, Neugart S, Velanis CN, Petersen J, Hoecker U, Christie JM, Jenkins GI. Phosphorylation of Arabidopsis UVR8 photoreceptor modulates protein interactions and responses to UV-B radiation. Nat Commun 2024; 15:1221. [PMID: 38336824 PMCID: PMC10858049 DOI: 10.1038/s41467-024-45575-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/09/2023] [Accepted: 01/27/2024] [Indexed: 02/12/2024] Open
Abstract
Exposure of plants to ultraviolet-B (UV-B) radiation initiates transcriptional responses that modify metabolism, physiology and development to enhance viability in sunlight. Many of these regulatory responses to UV-B radiation are mediated by the photoreceptor UV RESISTANCE LOCUS 8 (UVR8). Following photoreception, UVR8 interacts directly with multiple proteins to regulate gene expression, but the mechanisms that control differential protein binding to initiate distinct responses are unknown. Here we show that UVR8 is phosphorylated at several sites and that UV-B stimulates phosphorylation at Serine 402. Site-directed mutagenesis to mimic Serine 402 phosphorylation promotes binding of UVR8 to REPRESSOR OF UV-B PHOTOMORPHOGENESIS (RUP) proteins, which negatively regulate UVR8 action. Complementation of the uvr8 mutant with phosphonull or phosphomimetic variants suggests that phosphorylation of Serine 402 modifies UVR8 activity and promotes flavonoid biosynthesis, a key UV-B-stimulated response that enhances plant protection and crop nutritional quality. This research provides a basis to understand how UVR8 interacts differentially with effector proteins to regulate plant responses to UV-B radiation.
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Affiliation(s)
- Wei Liu
- School of Molecular Biosciences, College of Medical, Veterinary and Life Sciences, Bower Building, University of Glasgow, Glasgow, G12 8QQ, UK
| | - Giovanni Giuriani
- School of Molecular Biosciences, College of Medical, Veterinary and Life Sciences, Bower Building, University of Glasgow, Glasgow, G12 8QQ, UK
| | - Anezka Havlikova
- School of Molecular Biosciences, College of Medical, Veterinary and Life Sciences, Bower Building, University of Glasgow, Glasgow, G12 8QQ, UK
| | - Dezhi Li
- School of Molecular Biosciences, College of Medical, Veterinary and Life Sciences, Bower Building, University of Glasgow, Glasgow, G12 8QQ, UK
| | - Douglas J Lamont
- FingerPrints Proteomics Facility, School of Life Sciences, Discovery Centre, University of Dundee, Dow Street, Dundee, DD1 5EH, UK
| | - Susanne Neugart
- Department of Crop Sciences, Division Quality and Sensory of Plant Products, Georg-August-Universität Göttingen, D-37075, Göttingen, Germany
| | - Christos N Velanis
- School of Molecular Biosciences, College of Medical, Veterinary and Life Sciences, Bower Building, University of Glasgow, Glasgow, G12 8QQ, UK
- School of Life, Health and Chemical Sciences, Faculty of Science, Technology, Engineering and Maths, Venables Building, The Open University, Walton Hall Campus, Milton Keynes, MK7 6AA, UK
| | - Jan Petersen
- School of Molecular Biosciences, College of Medical, Veterinary and Life Sciences, Bower Building, University of Glasgow, Glasgow, G12 8QQ, UK
- Matthias Schleiden Institute of Genetics, Bioinformatics and Molecular Botany, Friedrich Schiller University, 07743, Jena, Germany
| | - Ute Hoecker
- Botanical Institute and Cluster of Excellence on Plant Sciences (CEPLAS), Biocenter, University of Köln, 50923, Köln, Germany
| | - John M Christie
- School of Molecular Biosciences, College of Medical, Veterinary and Life Sciences, Bower Building, University of Glasgow, Glasgow, G12 8QQ, UK
| | - Gareth I Jenkins
- School of Molecular Biosciences, College of Medical, Veterinary and Life Sciences, Bower Building, University of Glasgow, Glasgow, G12 8QQ, UK.
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3
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Mmbando GS. The recent relationship between ultraviolet-B radiation and biotic resistance in plants: a novel non-chemical strategy for managing biotic stresses. PLANT SIGNALING & BEHAVIOR 2023; 18:2191463. [PMID: 36934364 PMCID: PMC10730183 DOI: 10.1080/15592324.2023.2191463] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/02/2023] [Revised: 03/07/2023] [Accepted: 03/11/2023] [Indexed: 06/18/2023]
Abstract
Ultraviolet-B radiation (UVB; 280-315 nm) is a significant environmental factor that alters plant development, changes interactions between species, and reduces the prevalence of pests and diseases. While UVB radiation has negative effects on plant growth and performance at higher doses, at lower and ambient doses, UVB radiation acts as a non-chemical method for managing biotic stresses by having positive effects on disease resistance and genes that protect plants from pests. Understanding the recent relationship between UVB radiation and plants' biotic stresses is crucial for the development of crops that are resistant to UVB and biotic stresses. However, little is known about the recent interactions between UVB radiation and biotic stresses in plants. This review discusses the most recent connections between UVB radiation and biotic stresses in crops, including how UVB radiation affects a plant's resistance to disease and pests. The interaction of UVB radiation with pathogens and herbivores has been the subject of the most extensive research of these. This review also discusses additional potential strategies for conferring multiple UVB-biotic stress resistance in crop plants, such as controlling growth inhibition, miRNA 396 and 398 modulations, and MAP kinase. This study provides crucial knowledge and methods for scientists looking to develop multiple resistant crops that will improve global food security.
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Affiliation(s)
- Gideon Sadikiel Mmbando
- Department of Biology, College of Natural and Mathematical Sciences, University of Dodoma (UDOM), Dodoma, Tanzania
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4
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Wang Q, Zhao X, Jiang Y, Jin B, Wang L. Functions of Representative Terpenoids and Their Biosynthesis Mechanisms in Medicinal Plants. Biomolecules 2023; 13:1725. [PMID: 38136596 PMCID: PMC10741589 DOI: 10.3390/biom13121725] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/23/2023] [Revised: 11/25/2023] [Accepted: 11/27/2023] [Indexed: 12/24/2023] Open
Abstract
Terpenoids are the broadest and richest group of chemicals obtained from plants. These plant-derived terpenoids have been extensively utilized in various industries, including food and pharmaceuticals. Several specific terpenoids have been identified and isolated from medicinal plants, emphasizing the diversity of biosynthesis and specific functionality of terpenoids. With advances in the technology of sequencing, the genomes of certain important medicinal plants have been assembled. This has improved our knowledge of the biosynthesis and regulatory molecular functions of terpenoids with medicinal functions. In this review, we introduce several notable medicinal plants that produce distinct terpenoids (e.g., Cannabis sativa, Artemisia annua, Salvia miltiorrhiza, Ginkgo biloba, and Taxus media). We summarize the specialized roles of these terpenoids in plant-environment interactions as well as their significance in the pharmaceutical and food industries. Additionally, we highlight recent findings in the fields of molecular regulation mechanisms involved in these distinct terpenoids biosynthesis, and propose future opportunities in terpenoid research, including biology seeding, and genetic engineering in medicinal plants.
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Affiliation(s)
| | | | | | | | - Li Wang
- College of Horticulture and Landscape Architecture, Yangzhou University, Yangzhou 225009, China; (Q.W.); (X.Z.); (Y.J.); (B.J.)
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5
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McInnes KJ, van der Hooft JJJ, Sharma A, Herzyk P, Hundleby PAC, Schoonbeek HJ, Amtmann A, Ridout C, Jenkins GI. Overexpression of Brassica napus COMT1 in Arabidopsis heightens UV-B-mediated resistance to Plutella xylostella herbivory. Photochem Photobiol Sci 2023; 22:2341-2356. [PMID: 37505444 PMCID: PMC10509076 DOI: 10.1007/s43630-023-00455-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/07/2023] [Accepted: 07/04/2023] [Indexed: 07/29/2023]
Abstract
UV-B radiation regulates numerous morphogenic, biochemical and physiological responses in plants, and can stimulate some responses typically associated with other abiotic and biotic stimuli, including invertebrate herbivory. Removal of UV-B from the growing environment of various plant species has been found to increase their susceptibility to consumption by invertebrate pests, however, to date, little research has been conducted to investigate the effects of UV-B on crop susceptibility to field pests. Here, we report findings from a multi-omic and genetic-based study investigating the mechanisms of UV-B-stimulated resistance of the crop, Brassica napus (oilseed rape), to herbivory from an economically important lepidopteran specialist of the Brassicaceae, Plutella xylostella (diamondback moth). The UV-B photoreceptor, UV RESISTANCE LOCUS 8 (UVR8), was not found to mediate resistance to this pest. RNA-Seq and untargeted metabolomics identified components of the sinapate/lignin biosynthetic pathway that were similarly regulated by UV-B and herbivory. Arabidopsis mutants in genes encoding two enzymes in the sinapate/lignin biosynthetic pathway, CAFFEATE O-METHYLTRANSFERASE 1 (COMT1) and ELICITOR-ACTIVATED GENE 3-2 (ELI3-2), retained UV-B-mediated resistance to P. xylostella herbivory. However, the overexpression of B. napus COMT1 in Arabidopsis further reduced plant susceptibility to P. xylostella herbivory in a UV-B-dependent manner. These findings demonstrate that overexpression of a component of the sinapate/lignin biosynthetic pathway in a member of the Brassicaceae can enhance UV-B-stimulated resistance to herbivory from P. xylostella.
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Affiliation(s)
- Kirsty J McInnes
- School of Molecular Biosciences, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow, G12 8QQ, UK
- School of Natural and Environmental Sciences, Newcastle University, King's Road, Newcastle, NE1 7RU, UK
| | - Justin J J van der Hooft
- Glasgow Polyomics, University of Glasgow, Garscube Campus, Glasgow, G61 1QH, UK
- Bioinformatics Group, Plant Sciences Group, Wageningen University, 6708 PB, Wageningen, The Netherlands
| | - Ashutosh Sharma
- School of Molecular Biosciences, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow, G12 8QQ, UK
- School of Biological Sciences, University of Bristol, Bristol, BS8 1TQ, UK
| | - Pawel Herzyk
- School of Molecular Biosciences, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow, G12 8QQ, UK
- Glasgow Polyomics, University of Glasgow, Garscube Campus, Glasgow, G61 1QH, UK
| | | | | | - Anna Amtmann
- School of Molecular Biosciences, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow, G12 8QQ, UK
| | | | - Gareth I Jenkins
- School of Molecular Biosciences, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow, G12 8QQ, UK.
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6
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Crestani G, Cunningham N, Csepregi K, Badmus UO, Jansen MAK. From stressor to protector, UV-induced abiotic stress resistance. Photochem Photobiol Sci 2023; 22:2189-2204. [PMID: 37270745 PMCID: PMC10499975 DOI: 10.1007/s43630-023-00441-1] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/19/2023] [Accepted: 05/20/2023] [Indexed: 06/05/2023]
Abstract
Plants are continuously exposed to combinations of abiotic and biotic stressors. While much is known about responses to individual stressors, understanding of plant responses to combinations of stressors is limited. The effects of combined exposure to drought and UV radiation are particularly relevant in the context of climate change. In this study it was explored whether UV-exposure can be used as a tool to prime stress-resistance in plants grown under highly protected culture conditions. It was hypothesised that priming mint plantlets (Mentha spicata L.) with a low-dose of UV irradiance can alleviate the drought effect caused by a change in humidity upon transplanting. Plants were grown for 30 days on agar in sealed tissue culture containers. During this period, plants were exposed to ~ 0.22 W m-2 UV-B for 8 days, using either UV-blocking or UV- transmitting filters. Plants were then transplanted to soil and monitored for a further 7 days. It was found that non-UV exposed mint plants developed necrotic spots on leaves, following transfer to soil, but this was not the case for plants primed with UV. Results showed that UV induced stress resistance is associated with an increase in antioxidant capacity, as well as a decrease in leaf area. UV-induced stress resistance can be beneficial in a horticultural setting, where priming plants with UV-B can be used as a tool in the production of commercial crops.
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Affiliation(s)
- Gaia Crestani
- School of Biological, Earth and Environmental Science and Environmental Research Institute, University College Cork, North Mall Campus, Cork, T23 TK30, Ireland.
| | - Natalie Cunningham
- School of Biological, Earth and Environmental Science and Environmental Research Institute, University College Cork, North Mall Campus, Cork, T23 TK30, Ireland
| | - Kristóf Csepregi
- Department of Plant Biology, Institute of Biology, University of Pécs, Ifjúság u. 6, Pécs, 7624, Hungary
| | - Uthman O Badmus
- School of Biological, Earth and Environmental Science and Environmental Research Institute, University College Cork, North Mall Campus, Cork, T23 TK30, Ireland
| | - Marcel A K Jansen
- School of Biological, Earth and Environmental Science and Environmental Research Institute, University College Cork, North Mall Campus, Cork, T23 TK30, Ireland
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7
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Yuan J, Wu N, Cai Z, Chen C, Zhou Y, Chen H, Xue J, Liu X, Wang W, Cheng J, Li L. Metabolite Profiling and Transcriptome Analysis Explain the Difference in Accumulation of Bioactive Constituents in Taxilli Herba from Two Hosts. Genes (Basel) 2023; 14:genes14051040. [PMID: 37239400 DOI: 10.3390/genes14051040] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/21/2023] [Revised: 04/29/2023] [Accepted: 05/02/2023] [Indexed: 05/28/2023] Open
Abstract
Taxilli Herba (TH) is a semi-parasitic herb and the host is a key factor affecting its quality. Flavonoids are the main bioactive constituents in TH. However, studies on the difference in accumulation of flavonoids in TH from different hosts are vacant. In this study, integrated transcriptomic and metabolomic analyses were performed on TH from Morus alba L. (SS) and Liquidambar formosana Hance (FXS) to investigate the relationship between the regulation of gene expression and the accumulation of bioactive constituents. The results showed that a total of 3319 differentially expressed genes (DEGs) were screened in transcriptomic analysis, including 1726 up-regulated genes and 1547 down-regulated genes. In addition, 81 compounds were identified using ultra-fast performance liquid chromatography coupled with triple quadrupole-time of flight ion trap tandem mass spectrometry (UFLC-Triple TOF-MS/MS) analysis, and the relative contents of flavonol aglycones and glycosides were higher in TH from SS group than those from the FXS group. A putative biosynthesis network of flavonoids was created, combined with structural genes, and the expression patterns of genes were mostly consistent with the variation of bioactive constituents. It was noteworthy that the UDP-glycosyltransferase genes might participate in downstream flavonoid glycosides synthesis. The findings of this work will provide a new way to understand the quality formation of TH from the aspects of metabolite changes and molecular mechanism.
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Affiliation(s)
- Jiahuan Yuan
- College of Pharmacy, Nanjing University of Chinese Medicine, Nanjing 210023, China
| | - Nan Wu
- College of Pharmacy, Nanjing University of Chinese Medicine, Nanjing 210023, China
| | - Zhichen Cai
- College of Pharmacy, Nanjing University of Chinese Medicine, Nanjing 210023, China
| | - Cuihua Chen
- College of Pharmacy, Nanjing University of Chinese Medicine, Nanjing 210023, China
| | - Yongyi Zhou
- College of Pharmacy, Nanjing University of Chinese Medicine, Nanjing 210023, China
| | - Haijie Chen
- College of Pharmacy, Nanjing University of Chinese Medicine, Nanjing 210023, China
| | - Jia Xue
- College of Pharmacy, Nanjing University of Chinese Medicine, Nanjing 210023, China
| | - Xunhong Liu
- College of Pharmacy, Nanjing University of Chinese Medicine, Nanjing 210023, China
- Jiangsu Province Engineering Research Center of Classical Prescription, Nanjing 210023, China
| | - Wenxin Wang
- College of Pharmacy, Nanjing University of Chinese Medicine, Nanjing 210023, China
| | - Jianming Cheng
- College of Pharmacy, Nanjing University of Chinese Medicine, Nanjing 210023, China
- Jiangsu Province Engineering Research Center of Classical Prescription, Nanjing 210023, China
| | - Li Li
- College of Pharmacy, Guangxi University of Chinese Medicine, Nanning 530220, China
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8
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Fang S, Cong B, Zhao L, Liu C, Zhang Z, Liu S. Genome-Wide Analysis of Long Non-Coding RNAs Related to UV-B Radiation in the Antarctic Moss Pohlia nutans. Int J Mol Sci 2023; 24:ijms24065757. [PMID: 36982830 PMCID: PMC10051584 DOI: 10.3390/ijms24065757] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2022] [Revised: 02/22/2023] [Accepted: 02/22/2023] [Indexed: 03/30/2023] Open
Abstract
Antarctic organisms are consistently suffering from multiple environmental pressures, especially the strong UV radiation caused by the loss of the ozone layer. The mosses and lichens dominate the vegetation of the Antarctic continent, which grow and propagate in these harsh environments. However, the molecular mechanisms and related regulatory networks of these Antarctic plants against UV-B radiation are largely unknown. Here, we used an integrated multi-omics approach to study the regulatory mechanism of long non-coding RNAs (lncRNAs) of an Antarctic moss (Pohlia nutans) in response to UV-B radiation. We identified a total of 5729 lncRNA sequences by transcriptome sequencing, including 1459 differentially expressed lncRNAs (DELs). Through functional annotation, we found that the target genes of DELs were significantly enriched in plant-pathogen interaction and the flavonoid synthesis pathway. In addition, a total of 451 metabolites were detected by metabonomic analysis, and 97 differentially change metabolites (DCMs) were found. Flavonoids account for 20% of the total significantly up-regulated metabolites. In addition, the comprehensive transcriptome and metabolome analyses revealed the co-expression pattern of DELs and DCMs of flavonoids. Our results provide insights into the regulatory network of lncRNA under UV-B radiation and the adaptation of Antarctic moss to the polar environments.
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Affiliation(s)
- Shuo Fang
- Key Laboratory of Marine Eco-Environmental Science and Technology, First Institute of Oceanography, Ministry of Natural Resources, Qingdao 266061, China
| | - Bailin Cong
- Key Laboratory of Marine Eco-Environmental Science and Technology, First Institute of Oceanography, Ministry of Natural Resources, Qingdao 266061, China
| | - Linlin Zhao
- Key Laboratory of Marine Eco-Environmental Science and Technology, First Institute of Oceanography, Ministry of Natural Resources, Qingdao 266061, China
- Laboratory for Marine Ecology and Environmental Science, Pilot National Laboratory for Marine Science and Technology (Qingdao), Qingdao 266061, China
| | - Chenlin Liu
- Key Laboratory of Marine Eco-Environmental Science and Technology, First Institute of Oceanography, Ministry of Natural Resources, Qingdao 266061, China
| | - Zhaohui Zhang
- Key Laboratory of Marine Eco-Environmental Science and Technology, First Institute of Oceanography, Ministry of Natural Resources, Qingdao 266061, China
- Laboratory for Marine Ecology and Environmental Science, Pilot National Laboratory for Marine Science and Technology (Qingdao), Qingdao 266061, China
| | - Shenghao Liu
- Key Laboratory of Marine Eco-Environmental Science and Technology, First Institute of Oceanography, Ministry of Natural Resources, Qingdao 266061, China
- Laboratory for Marine Ecology and Environmental Science, Pilot National Laboratory for Marine Science and Technology (Qingdao), Qingdao 266061, China
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9
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Medina-Fraga AL, Chinen LA, Demkura PV, Lichy MZ, Gershenzon J, Ballaré CL, Crocco CD. AtBBX29 integrates photomorphogenesis and defense responses in Arabidopsis. Photochem Photobiol Sci 2023:10.1007/s43630-023-00391-8. [PMID: 36807054 DOI: 10.1007/s43630-023-00391-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/05/2022] [Accepted: 02/03/2023] [Indexed: 02/21/2023]
Abstract
Light is an environmental signal that modulates plant defenses against attackers. Recent research has focused on the effects of light on defense hormone signaling; however, the connections between light signaling pathways and the biosynthesis of specialized metabolites involved in plant defense have been relatively unexplored. Here, we show that Arabidopsis BBX29, a protein that belongs to the B-Box transcription factor (TF) family, integrates photomorphogenic signaling with defense responses by promoting flavonoid, sinapate and glucosinolate accumulation in Arabidopsis leaves. AtBBX29 transcript levels were up regulated by light, through photoreceptor signaling pathways. Genetic evidence indicated that AtBBX29 up-regulates MYB12 gene expression, a TF known to induce genes related to flavonoid biosynthesis in a light-dependent manner, and MYB34 and MYB51, which encode TFs involved in the regulation of glucosinolate biosynthesis. Thus, bbx29 knockout mutants displayed low expression levels of key genes of the flavonoid biosynthetic pathway, and the opposite was true in BBX29 overexpression lines. In agreement with the transcriptomic data, bbx29 mutant plants accumulated lower levels of kaempferol glucosides, sinapoyl malate, indol-3-ylmethyl glucosinolate (I3M), 4-methylsulfinylbutyl glucosinolate (4MSOB) and 3-methylthiopropyl glucosinolate (3MSP) in rosette leaves compared to the wild-type, and showed increased susceptibility to the necrotrophic fungus Botrytis cinerea and to the herbivore Spodoptera frugiperda. In contrast, BBX29 overexpressing plants displayed increased resistance to both attackers. In addition, we found that AtBBX29 plays an important role in mediating the effects of ultraviolet-B (UV-B) radiation on plant defense against B. cinerea. Taken together, these results suggest that AtBBX29 orchestrates the accumulation of specific light-induced metabolites and regulates Arabidopsis resistance against pathogens and herbivores.
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Affiliation(s)
- Ana L Medina-Fraga
- Facultad de Agronomía, IFEVA, Consejo Nacional de Investigaciones Científicas y Técnicas-Universidad de Buenos Aires, Av. San Martín 4453, C1417DSE, Ciudad Autónoma de Buenos Aires, Argentina
| | - Lucas A Chinen
- Facultad de Agronomía, IFEVA, Consejo Nacional de Investigaciones Científicas y Técnicas-Universidad de Buenos Aires, Av. San Martín 4453, C1417DSE, Ciudad Autónoma de Buenos Aires, Argentina
| | - Patricia V Demkura
- Facultad de Agronomía, IFEVA, Consejo Nacional de Investigaciones Científicas y Técnicas-Universidad de Buenos Aires, Av. San Martín 4453, C1417DSE, Ciudad Autónoma de Buenos Aires, Argentina
| | - Micaela Z Lichy
- Facultad de Agronomía, IFEVA, Consejo Nacional de Investigaciones Científicas y Técnicas-Universidad de Buenos Aires, Av. San Martín 4453, C1417DSE, Ciudad Autónoma de Buenos Aires, Argentina
| | - Jonathan Gershenzon
- Department of Biochemistry, Max Planck Institute for Chemical Ecology, Jena, Germany
| | - Carlos L Ballaré
- Facultad de Agronomía, IFEVA, Consejo Nacional de Investigaciones Científicas y Técnicas-Universidad de Buenos Aires, Av. San Martín 4453, C1417DSE, Ciudad Autónoma de Buenos Aires, Argentina
- IIBIO, Consejo Nacional de Investigaciones Científicas y Técnicas-Universidad Nacional de San Martín, B1650HMP, Buenos Aires, Argentina
| | - Carlos D Crocco
- Facultad de Agronomía, IFEVA, Consejo Nacional de Investigaciones Científicas y Técnicas-Universidad de Buenos Aires, Av. San Martín 4453, C1417DSE, Ciudad Autónoma de Buenos Aires, Argentina.
- Department of Plant Sciences, Section of Biology, Faculty of Sciences, University of Geneva, 1211, Geneva 4, Switzerland.
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10
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Mmbando GS, Ando S, Takahashi H, Hidema J. High ultraviolet-B sensitivity due to lower CPD photolyase activity is needed for biotic stress response to the rice blast fungus, Magnaporthe oryzae. PHOTOCHEMICAL & PHOTOBIOLOGICAL SCIENCES : OFFICIAL JOURNAL OF THE EUROPEAN PHOTOCHEMISTRY ASSOCIATION AND THE EUROPEAN SOCIETY FOR PHOTOBIOLOGY 2023:10.1007/s43630-023-00379-4. [PMID: 36729358 DOI: 10.1007/s43630-023-00379-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/02/2022] [Accepted: 01/17/2023] [Indexed: 02/03/2023]
Abstract
Sensitivity to ultraviolet-B (UVB, 280-315 nm) radiation varies widely among rice (Oryza sativa) cultivars due to differences in the activity of cyclobutane pyrimidines dimer (CPD) photolyase. Interestingly, cultivars with high UVB sensitivity and low CPD photolyase activity have been domesticated in tropical areas with high UVB radiation. Here, we investigated how differences in CPD photolyase activity affect plant resistance to the rice blast fungus, Magnaporthe oryzae, which is one of the other major stresses. We used Asian and African rice cultivars and transgenic lines with different CPD photolyase activities to evaluate the interaction effects of CPD photolyase activity on resistance to M. oryzae. In UVB-resistant rice plants overexpressing CPD photolyase, 12 h of low-dose UVB (0.4 W m-2) pretreatment enhanced sensitivity to M. oryzae. In contrast, UVB-sensitive rice (transgenic rice with antisense CPD photolyase, A-S; and rice cultivars with low CPD photolyase activity) showed resistance to M. oryzae. Several defense-related genes were upregulated in UVB-sensitive rice compared to UVB-resistant rice. UVB-pretreated A-S plants showed decreased multicellular infection and robust accumulation of reactive oxygen species. High UVB-induced CPD accumulation promoted defense responses and cross-protection mechanisms against rice blast disease. This may indicate a trade-off between high UVB sensitivity and biotic stress tolerance in tropical rice cultivars.
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Affiliation(s)
- Gideon S Mmbando
- Department of Molecular and Chemical Life Sciences, Graduate School of Life Sciences, Tohoku University, Sendai, 980-8577, Japan.,Department of Biology, College of Natural and Mathematical Sciences, University of Dodoma, P. O. Box 256, Dodoma, Tanzania
| | - Sugihiro Ando
- Graduate School of Agricultural Science, Tohoku University, Sendai, 980-8572, Japan
| | - Hideki Takahashi
- Graduate School of Agricultural Science, Tohoku University, Sendai, 980-8572, Japan
| | - Jun Hidema
- Department of Molecular and Chemical Life Sciences, Graduate School of Life Sciences, Tohoku University, Sendai, 980-8577, Japan.
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11
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Zhang Q, Lin L, Fang F, Cui B, Zhu C, Luo S, Yin R. Dissecting the functions of COP1 in the UVR8 pathway with a COP1 variant in Arabidopsis. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2023; 113:478-492. [PMID: 36495441 DOI: 10.1111/tpj.16059] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/08/2022] [Revised: 11/21/2022] [Accepted: 12/02/2022] [Indexed: 06/17/2023]
Abstract
COP1 is a critical repressor of plant photomorphogenesis in darkness. However, COP1 plays distinct roles in the photoreceptor UVR8 pathway in Arabidopsis thaliana. COP1 interacts with ultraviolet B (UV-B)-activated UVR8 monomers and promotes their retention and accumulation in the nucleus. Moreover, COP1 has a function in UV-B signaling, which involves the binding of its WD40 domain to UVR8 and HY5 via conserved Val-Pro (VP) motifs of these proteins. UV-B-activated UVR8 interacts with COP1 via both the core domain and the VP motif, leading to the displacement of HY5 from COP1 and HY5 stabilization. However, it remains unclear whether the function of COP1 in UV-B signaling is solely dependent on its VP motif binding capacity and whether UV-B regulates the subcellular localization of COP1. Based on published structures of the COP1 WD40 domain, we generated a COP1 variant with a single amino acid substitution, COP1C509S , which cannot bind to VP motifs but retains the ability to interact with the UVR8 core domain. UV-B only marginally increased nuclear YFP-COP1 levels and significantly promoted YFP-COP1 accumulation in the cytosol, but did not exert the same effects on YFP-COP1C509S . Thus, the full UVR8-COP1 interaction is important for COP1 accumulation in the cytosol. Notably, UV-B signaling including activation of HY5 transcription was obviously inhibited in the Arabidopsis lines expressing YFP-COP1C509S , which cannot bind VP motifs. We conclude that the full binding of UVR8 to COP1 leads to the predominant accumulation of COP1 in the cytosol and that COP1 has an additional function in UV-B signaling besides VP binding-mediated protein destabilization.
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Affiliation(s)
- Qianwen Zhang
- School of Agriculture and Biology, Shanghai Jiao Tong University, 800 Dongchuan RD. Minhang District, Shanghai, 200240, China
| | - Li Lin
- School of Agriculture and Biology, Shanghai Jiao Tong University, 800 Dongchuan RD. Minhang District, Shanghai, 200240, China
- Key Laboratory of Urban Agriculture Ministry of Agriculture, Shanghai Jiao Tong University, 200240, Shanghai, China
- Joint Center for Single Cell Biology, Shanghai Jiao Tong University, 200240, Shanghai, China
| | - Fang Fang
- School of Agriculture and Biology, Shanghai Jiao Tong University, 800 Dongchuan RD. Minhang District, Shanghai, 200240, China
| | - Beimi Cui
- Institute of Molecular Plant Sciences, School of Biological Sciences, University of Edinburgh, Edinburgh, EH9 3BF, UK
| | - Cheng Zhu
- State Key Laboratory of Microbial Metabolism, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai, 200240, China
| | - Shukun Luo
- State Key Laboratory of Microbial Metabolism, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai, 200240, China
| | - Ruohe Yin
- School of Agriculture and Biology, Shanghai Jiao Tong University, 800 Dongchuan RD. Minhang District, Shanghai, 200240, China
- Key Laboratory of Urban Agriculture Ministry of Agriculture, Shanghai Jiao Tong University, 200240, Shanghai, China
- Joint Center for Single Cell Biology, Shanghai Jiao Tong University, 200240, Shanghai, China
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12
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Li W, Sun Y, Li K, Tian H, Jia J, Zhang H, Wang Y, Wang H, Bi B, Guo J, Tran LSP, Miao Y. Sinapate Esters Mediate UV-B-Induced Stomatal Closure by Regulating Nitric Oxide, Hydrogen Peroxide, and Malate Accumulation in Arabidopsis thaliana. PLANT & CELL PHYSIOLOGY 2023; 63:1890-1899. [PMID: 35475535 DOI: 10.1093/pcp/pcac059] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/19/2021] [Revised: 04/11/2022] [Accepted: 04/26/2022] [Indexed: 06/14/2023]
Abstract
Sinapate esters, which are induced in plants under ultraviolet-B (UV-B) irradiation, have important roles not only in the protection against UV-B irradiation but also in the regulation of stomatal closure. Here, we speculated that sinapate esters would function in the stomatal closure of Arabidopsis thaliana in response to UV-B. We measured the stomatal aperture size of the wild-type (WT) and bright trichomes 1 (brt1) and sinapoylglucose accumulator 1 (sng1) mutants under UV-B irradiation; the latter two mutants are deficient in the conversion of sinapic acid to sinapoylglucose (SG) and SG to sinapoylmalate (SM), respectively. Both the brt1 and sng1 plants showed smaller stomatal apertures than the WT under normal light and UV-B irradiation conditions. The accumulation of SM and malate were induced by UV-B irradiation in WT and brt1 plants but not in sng1 plants. Consistently, exogenous malate application reduced UV-B-induced stomatal closure in WT, brt1 and sng1 plants. Nonetheless, levels of reactive oxygen species (ROS), nitric oxide (NO) and cytosolic Ca2+ were higher in guard cells of the sng1 mutant than in those of the WT under normal white light and UV-B irradiation, suggesting that disturbance of sinapate metabolism induced the accumulation of these signaling molecules that promote stomatal closure. Unexpectedly, exogenous sinapic acid application prevented stomatal closure of WT, brt1 and sng1 plants. In summary, we hypothesize that SG or other sinapate esters may promote the UV-B-induced malate accumulation and stomatal closure, whereas sinapic acid inhibits the ROS-NO pathway that regulates UV-B-induced cytosolic Ca2+ accumulation and stomatal closure.
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Affiliation(s)
- Weiqiang Li
- State Key Laboratory of Cotton Biology, Henan Joint International Laboratory for Crop Multi-Omics Research, School of Life Sciences, Henan University, No. 85 Jinming Road, Kaifeng 475004, China
| | - Yaru Sun
- State Key Laboratory of Cotton Biology, Henan Joint International Laboratory for Crop Multi-Omics Research, School of Life Sciences, Henan University, No. 85 Jinming Road, Kaifeng 475004, China
| | - Kun Li
- State Key Laboratory of Cotton Biology, Henan Joint International Laboratory for Crop Multi-Omics Research, School of Life Sciences, Henan University, No. 85 Jinming Road, Kaifeng 475004, China
| | - Hongtao Tian
- State Key Laboratory of Cotton Biology, Henan Joint International Laboratory for Crop Multi-Omics Research, School of Life Sciences, Henan University, No. 85 Jinming Road, Kaifeng 475004, China
| | - Jiangtao Jia
- State Key Laboratory of Cotton Biology, Henan Joint International Laboratory for Crop Multi-Omics Research, School of Life Sciences, Henan University, No. 85 Jinming Road, Kaifeng 475004, China
| | - Hongyu Zhang
- State Key Laboratory of Cotton Biology, Henan Joint International Laboratory for Crop Multi-Omics Research, School of Life Sciences, Henan University, No. 85 Jinming Road, Kaifeng 475004, China
| | - Yaping Wang
- State Key Laboratory of Cotton Biology, Henan Joint International Laboratory for Crop Multi-Omics Research, School of Life Sciences, Henan University, No. 85 Jinming Road, Kaifeng 475004, China
| | - Hong Wang
- State Key Laboratory of Cotton Biology, Henan Joint International Laboratory for Crop Multi-Omics Research, School of Life Sciences, Henan University, No. 85 Jinming Road, Kaifeng 475004, China
| | - Baodi Bi
- State Key Laboratory of Cotton Biology, Henan Joint International Laboratory for Crop Multi-Omics Research, School of Life Sciences, Henan University, No. 85 Jinming Road, Kaifeng 475004, China
| | - Jinggong Guo
- State Key Laboratory of Cotton Biology, Henan Joint International Laboratory for Crop Multi-Omics Research, School of Life Sciences, Henan University, No. 85 Jinming Road, Kaifeng 475004, China
| | - Lam-Son Phan Tran
- Institute of Research and Development, Duy Tan University, 03 Quang Trung, Da Nang 550000, Vietnam
- Institute of Genomics for Crop Abiotic Stress Tolerance, Texas Tech University, 1006 Canton Ave, Lubbock, TX 79409, USA
| | - Yuchen Miao
- State Key Laboratory of Cotton Biology, Henan Joint International Laboratory for Crop Multi-Omics Research, School of Life Sciences, Henan University, No. 85 Jinming Road, Kaifeng 475004, China
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13
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Chen Z, Dong Y, Huang X. Plant responses to UV-B radiation: signaling, acclimation and stress tolerance. STRESS BIOLOGY 2022; 2:51. [PMID: 37676395 PMCID: PMC10441900 DOI: 10.1007/s44154-022-00076-9] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/11/2022] [Accepted: 11/22/2022] [Indexed: 09/08/2023]
Abstract
Ultraviolet-B (UV-B) light is an intrinsic part of sunlight that reaches the earth's surface, and affects plant survival and adaptation. How plants respond to UV-B light is regulated by the wavelength, intensity and duration of UV-B radiation, and is also regulated by photosynthetically active radiation perceived by phytochrome and cryptochrome photoreceptors. Non-damaging UV-B light promotes plant photomorphogenesis and UV-B acclimation which enhances plant tolerance against UV-B stress. However, high-level UV-B radiation induces DNA damage, generates reactive oxygen species (ROS) and impairs photosynthesis. Plants have evolved efficient mechanisms to utilize informational UV-B signal, and protect themselves from UV-B stress. UV RESISTANCE LOCUS8 (UVR8) is a conserved plant-specific UV-B photoreceptor. It interacts with CONSTITUTIVELY PHOTOMORPHOGENIC1 (COP1) to initiate UV-B-specific light signaling and regulate UV-B responsive gene expression. A set of transcription factors such as ELONGATED HYPOCOTYL5 (HY5) function downstream of the UVR8-COP1 module to promote seedling de-etiolation for photomorphogenic development and biosynthesis of sunscreen flavonoids for UV-B stress tolerance. In addition to UVR8 signaling pathways, plants subjected to damaging UV-B radiation initiate stress protection and repair mechanisms through UVR8-independent pathways. In this review, we summarize the emerging mechanisms underlying UV-B stress acclimation and protection in plants, primarily revealed in the model plant Arabidopsis thaliana.
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Affiliation(s)
- Zhiren Chen
- State Key Laboratory of Cellular Stress Biology, School of Life Sciences, Faculty of Medicine and Life Sciences, Xiamen University, Xiamen, 361102, China
| | - Yuan Dong
- State Key Laboratory of Cellular Stress Biology, School of Life Sciences, Faculty of Medicine and Life Sciences, Xiamen University, Xiamen, 361102, China
| | - Xi Huang
- State Key Laboratory of Cellular Stress Biology, School of Life Sciences, Faculty of Medicine and Life Sciences, Xiamen University, Xiamen, 361102, China.
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14
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Procko C, Lee T, Borsuk A, Bargmann BOR, Dabi T, Nery JR, Estelle M, Baird L, O’Connor C, Brodersen C, Ecker JR, Chory J. Leaf cell-specific and single-cell transcriptional profiling reveals a role for the palisade layer in UV light protection. THE PLANT CELL 2022; 34:3261-3279. [PMID: 35666176 PMCID: PMC9421592 DOI: 10.1093/plcell/koac167] [Citation(s) in RCA: 17] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/27/2022] [Accepted: 05/06/2022] [Indexed: 05/27/2023]
Abstract
Like other complex multicellular organisms, plants are composed of different cell types with specialized shapes and functions. For example, most laminar leaves consist of multiple photosynthetic cell types. These cell types include the palisade mesophyll, which typically forms one or more cell layers on the adaxial side of the leaf. Despite their importance for photosynthesis, we know little about how palisade cells differ at the molecular level from other photosynthetic cell types. To this end, we have used a combination of cell-specific profiling using fluorescence-activated cell sorting and single-cell RNA-sequencing methods to generate a transcriptional blueprint of the palisade mesophyll in Arabidopsis thaliana leaves. We find that despite their unique morphology, palisade cells are otherwise transcriptionally similar to other photosynthetic cell types. Nevertheless, we show that some genes in the phenylpropanoid biosynthesis pathway have both palisade-enriched expression and are light-regulated. Phenylpropanoid gene activity in the palisade was required for production of the ultraviolet (UV)-B protectant sinapoylmalate, which may protect the palisade and/or other leaf cells against damaging UV light. These findings improve our understanding of how different photosynthetic cell types in the leaf can function uniquely to optimize leaf performance, despite their transcriptional similarities.
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Affiliation(s)
| | - Travis Lee
- Plant Biology Laboratory, Salk Institute for Biological Studies, La Jolla, California 92037, USA
- Genomic Analysis Laboratory, Salk Institute for Biological Studies, La Jolla, California 92037, USA
- Howard Hughes Medical Institute, Salk Institute for Biological Studies, La Jolla, California 92037, USA
| | - Aleca Borsuk
- School of the Environment, Yale University, New Haven, Connecticut 06511, USA
| | | | - Tsegaye Dabi
- Plant Biology Laboratory, Salk Institute for Biological Studies, La Jolla, California 92037, USA
- Howard Hughes Medical Institute, Salk Institute for Biological Studies, La Jolla, California 92037, USA
| | - Joseph R Nery
- Genomic Analysis Laboratory, Salk Institute for Biological Studies, La Jolla, California 92037, USA
| | - Mark Estelle
- Biological Sciences, University of California, San Diego, California 92093, USA
| | - Lisa Baird
- Department of Biology, University of San Diego, San Diego, California 92110, USA
| | - Carolyn O’Connor
- Flow Cytometry Core Facility, Salk Institute for Biological Studies, La Jolla, California 92037, USA
| | - Craig Brodersen
- School of the Environment, Yale University, New Haven, Connecticut 06511, USA
| | - Joseph R Ecker
- Plant Biology Laboratory, Salk Institute for Biological Studies, La Jolla, California 92037, USA
- Genomic Analysis Laboratory, Salk Institute for Biological Studies, La Jolla, California 92037, USA
- Howard Hughes Medical Institute, Salk Institute for Biological Studies, La Jolla, California 92037, USA
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15
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Xu J, Luo H, Zhou SS, Jiao SQ, Jia KH, Nie S, Liu H, Zhao W, Wang XR, El-Kassaby YA, Porth I, Mao JF. UV-B and UV-C radiation trigger both common and distinctive signal perceptions and transmissions in Pinus tabuliformis Carr. TREE PHYSIOLOGY 2022; 42:1587-1600. [PMID: 35234958 DOI: 10.1093/treephys/tpac021] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/31/2021] [Accepted: 02/17/2022] [Indexed: 06/14/2023]
Abstract
In plants, ultraviolet (UV)-light is an important driver for growth and natural distribution, and is also a valuable tool for manipulating productivity as well as biotic interactions. Understanding of plant responses to different UV radiation is sparse, especially from a systems biology perspective and particularly for conifers. Here, we evaluated the physiological and transcriptomic responses to the short-term application of high-irradiance UV-B and UV-C waves on Pinus tabuliformis Carr., a major conifer in Northern China. By undertaking time-ordered gene coexpression network analyses and network comparisons incorporating physiological traits and gene expression variation, we uncovered communalities but also differences in P. tabuliformis responses to UV-B and UV-C. Both types of spectral bands caused a significant inhibition of photosynthesis, and conversely, the improvement of antioxidant capacity, flavonoid production and signaling pathways related to stress resistance, indicating a clear switch from predominantly primary metabolism to enhanced defensive metabolism in pine. We isolated distinct subnetworks for photoreceptor-mediated signal transduction, maximum quantum efficiency of photosystem II (Fv/Fm) regulation and flavonoid biosynthesis in response to UV-B and UV-C radiation. From these subnetworks, we further identified phototropins as potentially important elements in both UV-B and UV-C signaling and, for the first time, suggesting peptide hormones to be involved in promoting flavonoid biosynthesis against UV-B, while these hormones seem not to be implicated in the defense against UV-C exposure. The present study employed an effective strategy for disentangling the complex physiological and genetic regulatory mechanisms in a nonmodel plant species, and thus, provides a suitable reference for future functional evaluations and artificial UV-light mediated growing strategies in plant production.
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Affiliation(s)
- Jie Xu
- Beijing Advanced Innovation Center for Tree Breeding by Molecular Design, National Engineering Laboratory for Tree Breeding, Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry University, Qinghua East Road No35, Beijing 100083, China
| | - Hang Luo
- Beijing Advanced Innovation Center for Tree Breeding by Molecular Design, National Engineering Laboratory for Tree Breeding, Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry University, Qinghua East Road No35, Beijing 100083, China
| | - Shan-Shan Zhou
- Beijing Advanced Innovation Center for Tree Breeding by Molecular Design, National Engineering Laboratory for Tree Breeding, Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry University, Qinghua East Road No35, Beijing 100083, China
| | - Si-Qian Jiao
- Beijing Advanced Innovation Center for Tree Breeding by Molecular Design, National Engineering Laboratory for Tree Breeding, Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry University, Qinghua East Road No35, Beijing 100083, China
| | - Kai-Hua Jia
- Beijing Advanced Innovation Center for Tree Breeding by Molecular Design, National Engineering Laboratory for Tree Breeding, Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry University, Qinghua East Road No35, Beijing 100083, China
| | - Shuai Nie
- Beijing Advanced Innovation Center for Tree Breeding by Molecular Design, National Engineering Laboratory for Tree Breeding, Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry University, Qinghua East Road No35, Beijing 100083, China
| | - Hui Liu
- Beijing Advanced Innovation Center for Tree Breeding by Molecular Design, National Engineering Laboratory for Tree Breeding, Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry University, Qinghua East Road No35, Beijing 100083, China
| | - Wei Zhao
- Beijing Advanced Innovation Center for Tree Breeding by Molecular Design, National Engineering Laboratory for Tree Breeding, Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry University, Qinghua East Road No35, Beijing 100083, China
- Department of Ecology and Environmental Science, Umeå Plant Science Centre, Umeå University, Linnaeus väg 6, Umeå SE-901 87, Sweden
| | - Xiao-Ru Wang
- Beijing Advanced Innovation Center for Tree Breeding by Molecular Design, National Engineering Laboratory for Tree Breeding, Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry University, Qinghua East Road No35, Beijing 100083, China
- Department of Ecology and Environmental Science, Umeå Plant Science Centre, Umeå University, Linnaeus väg 6, Umeå SE-901 87, Sweden
| | - Yousry A El-Kassaby
- Department of Forest and Conservation Sciences, The University of British Columbia, 2424 Main Mall, Vancouver, British Columbia V6T 1Z4, Canada
| | - Ilga Porth
- Départment des Sciences du Bois et de la Forêt, Faculté de Foresterie, de Géographie et Géomatique, Université Laval Québec, 1030 Avenue de la Médecine, Québec, Québec City G1V 0A6, Canada
| | - Jian-Feng Mao
- Beijing Advanced Innovation Center for Tree Breeding by Molecular Design, National Engineering Laboratory for Tree Breeding, Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants, Ministry of Education, College of Biological Sciences and Technology, Beijing Forestry University, Qinghua East Road No35, Beijing 100083, China
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16
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Palma CFF, Castro-Alves V, Morales LO, Rosenqvist E, Ottosen CO, Hyötyläinen T, Strid Å. Metabolic changes in cucumber leaves are enhanced by blue light but differentially affected by UV interactions with light signalling pathways in the visible spectrum. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2022; 321:111326. [PMID: 35696926 DOI: 10.1016/j.plantsci.2022.111326] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/03/2022] [Revised: 05/05/2022] [Accepted: 05/11/2022] [Indexed: 06/15/2023]
Abstract
Ultraviolet radiation (UV, 280-400 nm) as an environmental signal triggers metabolic acclimatory responses. However, how different light qualities affect UV acclimation during growth is poorly understood. Here, cucumber plants (Cucumis sativus) were grown under blue, green, red, or white light in combination with UV. Their effects on leaf metabolites were determined using untargeted metabolomics. Blue and white growth light triggered increased levels of compounds related to primary and secondary metabolism, including amino acids, phenolics, hormones, and compounds related to sugar metabolism and the TCA cycle. In contrast, supplementary UV in a blue or white light background decreased leaf content of amino acids, phenolics, sugars, and TCA-related compounds, without affecting abscisic acid, auxin, zeatin, or jasmonic acid levels. However, in plants grown under green light, UV induced increased levels of phenolics, hormones (auxin, zeatin, dihydrozeatin-7-N-dihydrozeatin, jasmonic acid), amino acids, sugars, and TCA cycle-related compounds. Plants grown under red light with UV mainly showed decreased sugar content. These findings highlight the importance of the blue light component for metabolite accumulation. Also, data on interactions of UV with green light on the one hand, and blue or white light on the other, further contributes to our understanding of light quality regulation of plant metabolism.
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Affiliation(s)
| | - Victor Castro-Alves
- School of Science and Technology, Man-Technology-Environment Research Centre (MTM), Örebro University, SE-70182 Örebro, Sweden
| | - Luis Orlando Morales
- School of Science and Technology, Örebro Life Science Centre, Örebro University, SE-70182 Örebro, Sweden
| | - Eva Rosenqvist
- Section of Crop Sciences, Institute of Plant and Environmental Sciences, University of Copenhagen, Højbakkegård Allé 9, DK-2630 Tåstrup, Denmark
| | - Carl-Otto Ottosen
- Aarhus University, Plant Food and Climate, Department of Food Science, Agrofoodpark 48, DK-8200 Aarhus, Denmark
| | - Tuulia Hyötyläinen
- School of Science and Technology, Man-Technology-Environment Research Centre (MTM), Örebro University, SE-70182 Örebro, Sweden
| | - Åke Strid
- School of Science and Technology, Örebro Life Science Centre, Örebro University, SE-70182 Örebro, Sweden.
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17
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Zhang Y, Zhang J, Yan C, Fang M, Wang L, Huang Y, Wang F. Metabolome and Microbiome Signatures in the Leaves of Wild Tea Plant Resources Resistant to Pestalotiopsis theae. Front Microbiol 2022; 13:907962. [PMID: 35910661 PMCID: PMC9335280 DOI: 10.3389/fmicb.2022.907962] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/30/2022] [Accepted: 05/23/2022] [Indexed: 11/28/2022] Open
Abstract
Tea (Camellia sinensis) is an important crop that is mainly used in the food industry. This study using the metabolome and microbiome investigates the resistance factors of wild tea plant resources against tea gray blight disease, which is caused by Pestalotiopsis theae (Sawada) Steyaert. According to the interaction analysis of tea leaves and pathogenic fungus, the resistance of wild tea plant resource “R1” (Resistance 1) to tea gray blight disease was significantly higher than that of wild tea plant resource “S1” (Susceptibility 1). The difference between “R1” and “S1” in the metabolome was obvious. There were 145 metabolites that significantly changed. The phenolic acids and flavonoids were the major increased categories in “R1,” and it included 4-O-glucosyl-sinapate and petunidin-3-o-(6”-o-p-coumaroyl) rutinoside. Six metabolic pathways were significantly enriched, including aminoacyl-tRNA biosynthesis, flavone, and flavonol biosynthesis. In terms of bacteria, there was no significant difference between “S1” and “R1” in the principal component analysis (PCA). Pseudomonas was the major bacterial genus in “S1” and “R1.” In addition, each of the two resources had its own predominant genus: Cellvibirio was a predominant bacterial genus in “S1” and Candidatus_competibacter was a predominant bacterial genus in “R1.” In terms of fungi, the fungal diversity and the abundance of the two tea plant resource samples could be distinguished clearly. The fungal component of “S1” was more abundant than that of “R1” at the genus level. Toxicocladosporium was the predominant fungal genus of “S1,” and Filobasidium was the predominant fungal genus of “R1.” The relative abundance of unclassified-norank-norank-Chloroplast and Penicillium were significantly different between “S1” and “R1.” Penicillium was identified as a potential biomarker. They correlated with some metabolites enriched in “S1” or “R1,” such as L-arginine and quercetin-3-o-(2”-o-rhamnosyl) rutinoside-7-o-glucoside. Overall, phenolic acids, flavonoids, and Penicillium could be functional metabolites or microorganisms that contributed to improving the resistance of wild tea plant resources to tea gray blight disease.
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Affiliation(s)
- Yuqian Zhang
- College of Horticulture, South China Agricultural University, Guangzhou, China
| | - Jie Zhang
- Henan Key Laboratory of Tea Plant Comprehensive Utilization in South Henan, College of Tea Science, Xinyang Agriculture and Forestry University, Xinyang, China
| | - Changyu Yan
- College of Horticulture, South China Agricultural University, Guangzhou, China
| | - Meishan Fang
- College of Horticulture, South China Agricultural University, Guangzhou, China
| | - Lijie Wang
- College of Horticulture, South China Agricultural University, Guangzhou, China
| | - Yahui Huang
- College of Horticulture, South China Agricultural University, Guangzhou, China
- Yahui Huang
| | - Feiyan Wang
- College of Horticulture, South China Agricultural University, Guangzhou, China
- *Correspondence: Feiyan Wang
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Tsurumoto T, Fujikawa Y, Onoda Y, Ochi Y, Ohta D, Okazawa A. Transcriptome and metabolome analyses revealed that narrowband 280 and 310 nm UV-B induce distinctive responses in Arabidopsis. Sci Rep 2022; 12:4319. [PMID: 35279697 PMCID: PMC8918342 DOI: 10.1038/s41598-022-08331-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/13/2021] [Accepted: 02/28/2022] [Indexed: 11/09/2022] Open
Abstract
AbstractIn plants, the UV-B photoreceptor UV RESISTANCE LOCUS8 (UVR8) perceives UV-B and induces UV-B responses. UVR8 absorbs a range of UV-B (260–335 nm). However, the responsiveness of plants to each UV-B wavelength has not been intensively studied so far. Here, we performed transcriptome and metabolome analyses of Arabidopsis using UV light emitting diodes (LEDs) with peak wavelengths of 280 and 310 nm to investigate the differences in the wavelength-specific UV-B responses. Irradiation with both UV-LEDs induced gene expression of the transcription factor ELONGATED HYPOCOTYL 5 (HY5), which has a central role in the UVR8 signaling pathway. However, the overall transcriptomic and metabolic responses to 280 and 310 nm UV-LED irradiation were different. Most of the known UV-B-responsive genes, such as defense-related genes, responded only to 280 nm UV-LED irradiation. Lipids, polyamines and organic acids were the metabolites most affected by 280 nm UV-LED irradiation, whereas the effect of 310 nm UV-LED irradiation on the metabolome was considerably less. Enzymatic genes involved in the phenylpropanoid pathway upstream in anthocyanin biosynthesis were up-regulated only by 280 nm UV-LED irradiation. These results revealed that the responsivenesses of Arabidopsis to 280 and 310 nm UV-B were significantly different, suggesting that UV-B signaling is mediated by more complex pathways than the current model.
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Rehman S, Ali Ashfaq U, Sufyan M, Shahid I, Ijaz B, Hussain M. The Insight of In Silico and In Vitro evaluation of Beta vulgaris phytochemicals against Alzheimer's disease targeting acetylcholinesterase. PLoS One 2022; 17:e0264074. [PMID: 35239683 PMCID: PMC8893657 DOI: 10.1371/journal.pone.0264074] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/25/2021] [Accepted: 02/02/2022] [Indexed: 11/26/2022] Open
Abstract
B. vulgaris extracts possess antioxidant, anti-inflammatory along with its role in improving memory disorders. Subsequently, in vitro and in silico studies of its purified phytochemicals may expand complementary and alternative Alzheimer's therapeutic option. Super activation of acetylcholinesterase enzyme is associated explicitly with Alzheimer's disease (AD) ultimately resulting in senile dementia. Hence, acetylcholinesterase enzyme inhibition is employed as a promising approach for AD treatment. Many FDA approved drugs are unable to cure the disease progression completely. The Present study was devised to explore the potential bioactive phytochemicals of B. vulgaris as alternative therapeutic agents against AD by conducting in vitro and in silico studies. To achieve this, chemical structures of phytochemicals were recruited from PubChem. Further, these compounds were analyzed for their binding affinities towards acetylcholinesterase (AChE) enzyme. Pharmacophoric ligand-based models showed major characteristics like, HBA, HBD, hydrophobicity, aromaticity and positively ionizable surface morphology for receptor binding. Virtual screening identified three hit compounds including betanin, myricetin and folic acid with least binding score compared to the reference drug, donepezil (-17 kcal/mol). Further, in vitro studies for anti-acetylcholinesterase activity of betanin and glycine betaine were performed. Dose response analysis showed 1.271 μM and 1.203 μM 50% inhibitory concentration (IC50) values for betanin and glycine betaine compounds respectively. Our findings indicate that phytoconstituents of B. vulgaris can be implicated as an alternative therapeutic drug candidate for cognitive disorders like Alzheimer's disease.
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Affiliation(s)
- Sidra Rehman
- Department of Biosciences, COMSATS University Islamabad (CUI), Islamabad, Pakistan
| | - Usman Ali Ashfaq
- Department of Bioinformatics and Biotechnology, Government College University Faisalabad, Faisalabad, Pakistan
| | - Muhammad Sufyan
- Department of Bioinformatics and Biotechnology, Government College University Faisalabad, Faisalabad, Pakistan
| | - Imran Shahid
- Faculty of Medicine, Department of Pharmacology and Toxicology, Umm Al-Qura University, Makkah, Saudi Arabia
| | - Bushra Ijaz
- Centre of Excellence in Molecular Biology, University of the Punjab, Lahore, Pakistan
| | - Mureed Hussain
- Department of Life Sciences, University of Management and Technology, Lahore, Pakistan
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Wang D, Dawadi B, Qu J, Ye J. Light-Engineering Technology for Enhancing Plant Disease Resistance. FRONTIERS IN PLANT SCIENCE 2022; 12:805614. [PMID: 35251062 PMCID: PMC8891579 DOI: 10.3389/fpls.2021.805614] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/30/2021] [Accepted: 12/31/2021] [Indexed: 06/14/2023]
Abstract
Insect vector-borne diseases are a major constraint to a wide variety of crops. Plants integrate environmental light and internal signalings to defend dual stresses both from the vector insects and vector-transmitted pathogens. In this review, we highlight a studies that demonstrate how light regulates plants deploying mechanisms against vector-borne diseases. Four major host defensive pathways involved in the host defense network against multiple biotic stresses are reviewed: innate immunity, phytohormone signaling, RNA interference, and protein degradation. The potential with light-engineering technology with light emitting diodes (LEDs) and genome engineering technology for fine-tuning crop defense and yield are also discussed.
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Affiliation(s)
- Duan Wang
- State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, China
- CAS Center for Excellence in Biotic Interactions, University of Chinese Academy of Sciences, Beijing, China
| | - Bishnu Dawadi
- State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, China
- CAS Center for Excellence in Biotic Interactions, University of Chinese Academy of Sciences, Beijing, China
| | - Jing Qu
- CAS Center for Excellence in Biotic Interactions, University of Chinese Academy of Sciences, Beijing, China
- Beijing Institutes of Life Science, Chinese Academy of Sciences, Beijing, China
| | - Jian Ye
- State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, China
- CAS Center for Excellence in Biotic Interactions, University of Chinese Academy of Sciences, Beijing, China
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Xiang S, Wu S, Jing Y, Chen L, Yu D. Phytochrome B regulates jasmonic acid-mediated defense response against Botrytis cinerea in Arabidopsis. PLANT DIVERSITY 2022; 44:109-115. [PMID: 35281129 PMCID: PMC8897165 DOI: 10.1016/j.pld.2021.01.007] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/26/2020] [Revised: 01/14/2021] [Accepted: 01/26/2021] [Indexed: 05/11/2023]
Abstract
The phytochrome B mediated light signaling integrates with various phytohormone signalings to control plant immune response. However, it is still unclear whether phyB-mediated light signaling has an effect on the biosynthesis of jasmonate during plant defense response against Botrytis cinerea. In this study, we demonstrated that phyB-mediated light signaling has a role in this process. Initially, we confirmed that phyb plants were obviously less resistant to B. cinerea while phyB overexpressing plants showed significantly enhanced resistance. We also found that the expression of numerous JA biosynthesis genes was promoted upon treatment with red or white light when compared to that of darkness, and that this promotion is dependent on phyB. Consistent with the gene expression results, phyb plants accumulated reduced pool of JA-Ile, indicating that phyB-mediated light signaling indeed increased JA biosynthesis. Further genetic analysis showed that light-mediated JAZ9 degradation and phyB-enhanced resistance were dependent on the receptor COI1, and that pif1/3/4/5 (pifq) can largely rescue the severe symptom of phyb. Taken together, our study demonstrates that phyB may participate in plant defense against B. cinerea through the modulation of the biosynthesis of JA.
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Affiliation(s)
- Shengyuan Xiang
- CAS Key Laboratory of Tropical Plant Resources and Sustainable Use, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Menglun, Mengla, Yunnan, 666303, China
- University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Songguo Wu
- CAS Key Laboratory of Tropical Plant Resources and Sustainable Use, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Menglun, Mengla, Yunnan, 666303, China
- University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Yifen Jing
- CAS Key Laboratory of Tropical Plant Resources and Sustainable Use, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Menglun, Mengla, Yunnan, 666303, China
- University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Ligang Chen
- CAS Key Laboratory of Tropical Plant Resources and Sustainable Use, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Menglun, Mengla, Yunnan, 666303, China
- Center of Economic Botany, Core Botanical Gardens, Chinese Academy of Sciences, Menglun, Mengla, Yunnan, 666303, China
- Corresponding author. CAS Key Laboratory of Tropical Plant Resources and Sustainable Use, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Menglun, Mengla, Yunnan, 666303, China; Fax: +86 871 65160916.
| | - Diqiu Yu
- CAS Key Laboratory of Tropical Plant Resources and Sustainable Use, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Menglun, Mengla, Yunnan, 666303, China
- Laboratory for Conservation and Utilization of Bio-Resources in Yunnan, Yunnan University, Kunming, Yunnan, 666303, China
- Corresponding author. CAS Key Laboratory of Tropical Plant Resources and Sustainable Use, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Menglun, Mengla, Yunnan, 666303, China; Fax: +86 871 65160916.
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22
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Nichelmann L, Pescheck F. Solar UV-B effects on composition and UV screening efficiency of foliar phenolics in Arabidopsis thaliana are augmented by temperature. PHYSIOLOGIA PLANTARUM 2021; 173:762-774. [PMID: 34510467 DOI: 10.1111/ppl.13554] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/18/2021] [Revised: 08/25/2021] [Accepted: 09/06/2021] [Indexed: 05/24/2023]
Abstract
The accumulation of foliar phenolics constitutes one strategy of plants against the potentially harmful effects of ultraviolet-B and A (UV-B, UV-A) radiation. These compounds protect photosensitive tissues by shielding and antioxidative function. It is unknown, however, whether seasonal acclimation to natural conditions may modify the UV-B effect on phenylpropanoid composition and localisation, and thus their screening efficiency. To address this debate, a field experiment with the wildtype of Arabidopsis thaliana accession Landsberg erecta (Ler) was implemented over a whole year with plants exposed to different UV-filter treatments. While seasonal increases of UV-B radiation had a slight negative effect on the amount of hydroxycinnamic acids (HCAs), low temperatures increased foliar HCAs. HCAs, however, did not contribute substantially to seasonal changes of in vivo UV absorbance. Kaempferol and quercetin derivatives increased significantly under ambient UV-B radiation, and low temperature interacted with this effect. A shift of epidermal UV-A shielding from kaempferol to quercetin derivatives was elucidated in UV-B presence. Despite this, a substantial 20-fold increase of quercetin derivatives, during periods with high irradiance and low temperature, did not affect UV absorbance leading to the conclusion that quercetin accumulation was not exclusively in epidermal vacuoles. Using confocal microscopy, the potential occurrence of quercetin in mesophyll cells was demonstrated in plants grown with experimental UV-B radiation at low temperature for the first time in A. thaliana. The presented study discusses the idea that cross-talk of UV-B radiation and temperature might adjust the physiological function of quercetin from an (epidermal) screening to an antioxidant substance.
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Affiliation(s)
- Lars Nichelmann
- Botanical Institute and Botanical Garden, Christian-Albrechts-University of Kiel, Kiel, Germany
| | - Frauke Pescheck
- Botanical Institute and Botanical Garden, Christian-Albrechts-University of Kiel, Kiel, Germany
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23
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Palma CFF, Castro-Alves V, Rosenqvist E, Ottosen CO, Strid Å, Morales LO. Effects of UV radiation on transcript and metabolite accumulation are dependent on monochromatic light background in cucumber. PHYSIOLOGIA PLANTARUM 2021; 173:750-761. [PMID: 34510478 DOI: 10.1111/ppl.13551] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/30/2021] [Revised: 08/25/2021] [Accepted: 09/01/2021] [Indexed: 06/13/2023]
Abstract
During recent years, we have advanced our understanding of plant molecular responses to ultraviolet radiation (UV, 280-400 nm); however, how plants respond to UV radiation under different spectral light qualities is poorly understood. In this study, cucumber plants (Cucumis sativus "Lausanna RZ F1") were grown under monochromatic blue, green, red, and broadband white light in combination with UV radiation. The effects of light quality and UV radiation on acclimatory responses were assessed by measuring transcript accumulation of ELONGATED HYPOCOTYL 5 (HY5), CHALCONE SYNTHASE 2 (CHS2), and LIGHT HARVESTING COMPLEX II (LHCII), and the accumulation of flavonoids and hydroxycinnamic acids in the leaves. The growth light backgrounds differentially regulated gene expression and metabolite accumulation. While HY5 and CHS2 transcripts were induced by blue and white light, LHCII was induced by white and red light. Furthermore, UV radiation antagonized the effects of blue, red, green, and white light on transcript accumulation in a gene-dependent manner. Plants grown under blue light with supplementary UV radiation increased phenylalanine, flavonol disaccharide I and caffeic acid contents compared to those exposed only to blue light. UV radiation also induced the accumulation of flavonol disaccharide I and II, ferulic acid hexose and coumaric acid hexose in plants grown under green light. Our findings provide a further understanding of plant responses to UV radiation in combination with different light spectra and contribute to the design of light recipes for horticultural practices that aim to modify plant metabolism and ultimately improve crop quality.
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Affiliation(s)
| | - Victor Castro-Alves
- School of Science and Technology, Life Science Centre, Örebro University, Örebro, Sweden
| | - Eva Rosenqvist
- Section of Crop Sciences, Institute of Plant and Environmental Sciences, University of Copenhagen, Tåstrup, Denmark
| | | | - Åke Strid
- School of Science and Technology, Life Science Centre, Örebro University, Örebro, Sweden
| | - Luis Orlando Morales
- School of Science and Technology, Life Science Centre, Örebro University, Örebro, Sweden
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24
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Zhou X, Lyu J, Sun L, Dong J, Xu H. Metabolic programming of Rhododendron chrysanthum leaves following exposure to UVB irradiation. FUNCTIONAL PLANT BIOLOGY : FPB 2021; 48:1175-1185. [PMID: 34600596 DOI: 10.1071/fp20386] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/09/2020] [Accepted: 08/07/2021] [Indexed: 06/13/2023]
Abstract
Excessive UVB reaching the earth is a cause for concern. To decipher the mechanism concerning UVB resistance of plants, we studied the effects of UVB radiation on photosynthesis and metabolic profiling of Rhododendron chrysanthum Pall. by applying 2.3Wm-2 of UVB radiation for 2days. Results showed that maximum quantum yield of PSII (Fv/Fm) and effective quantum yield of PSII (φPSII) decreased by 7.95% and 8.36%, respectively, following UVB exposure. Twenty five known metabolites were identified as most important by two different methods, including univariate and multivariate statistical analyses. Treatment of R. chrysanthum with UVB increased the abundance of flavonoids, organic acids, and amino acids by 62%, 22%, and 5%, respectively. UVB irradiation also induced about 1.18-fold increase in 11 top-ranked metabolites identified: five organic acids (d-2,3-dihydroxypropanoic acid, maleic acid, glyceric acid, fumaric acid and suberic acid), four amino acids (l-norleucine, 3-oxoalanine, l-serine and glycine), and two fatty acids (pelargonic acid and myristoleic acid). In addition, UVB irradiation increased the intermediate products of arginine biosynthesis and the TCA cycle. Taken together, the accumulation of flavonoids, organic acids, amino acids and fatty acids, accompanied by enhancement of TCA cycle and arginine biosynthesis, may protect R. chrysanthum plants against UVB deleterious effects.
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Affiliation(s)
- Xiaofu Zhou
- Faculty of Jilin Provincial Key Laboratory of Plant Spectral Regions Science and Green Production, Jilin Normal University, Siping 136000, China
| | - Jie Lyu
- Faculty of Biological Science and Technology, Baotou Teachers' College, Baotou 014030, China
| | - Li Sun
- Faculty of Siping Central People's Hospital, Siping 136000, China
| | - Jiawei Dong
- Faculty of Jilin Provincial Key Laboratory of Plant Spectral Regions Science and Green Production, Jilin Normal University, Siping 136000, China
| | - Hongwei Xu
- Faculty of Jilin Provincial Key Laboratory of Plant Spectral Regions Science and Green Production, Jilin Normal University, Siping 136000, China
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25
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Meyer P, Van de Poel B, De Coninck B. UV-B light and its application potential to reduce disease and pest incidence in crops. HORTICULTURE RESEARCH 2021; 8:194. [PMID: 34465753 PMCID: PMC8408258 DOI: 10.1038/s41438-021-00629-5] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/19/2021] [Revised: 07/08/2021] [Accepted: 07/13/2021] [Indexed: 05/03/2023]
Abstract
Ultraviolet-B radiation (280-315 nm), perceived by the plant photoreceptor UVR8, is a key environmental signal that influences plant growth and development and can reduce disease and pest incidence. The positive effect of UV-B on disease resistance and incidence in various plant species supports the implementation of supplemental UV-B radiation in sustainable crop production. However, despite many studies focusing on UV-B light, there is no consensus on the best mode of application. This review aims to analyze, evaluate, and organize the different application strategies of UV-B radiation in crop production with a focus on disease resistance. We summarize the physiological effects of UV-B light on plants and discuss how plants perceive and transduce UV-B light by the UVR8 photoreceptor as well as how this perception alters plant specialized metabolite production. Next, we bring together conclusions of various studies with respect to different UV-B application methods to improve plant resistance. In general, supplemental UV-B light has a positive effect on disease resistance in many plant-pathogen combinations, mainly through the induction of the production of specialized metabolites. However, many variables (UV-B light source, plant species, dose and intensity, timing during the day, duration, background light, etc.) make it difficult to compare and draw general conclusions. We compiled the information of recent studies on UV-B light applications, including e.g., details on the UV-B light source, experimental set-up, calculated UV-B light dose, intensity, and duration. This review provides practical insights and facilitates future research on UV-B radiation as a promising tool to reduce disease and pest incidence.
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Affiliation(s)
- Prisca Meyer
- Division of Crop Biotechnics, Department of Biosystems, KU Leuven, 3001, Leuven, Belgium
| | - Bram Van de Poel
- Division of Crop Biotechnics, Department of Biosystems, KU Leuven, 3001, Leuven, Belgium
| | - Barbara De Coninck
- Division of Crop Biotechnics, Department of Biosystems, KU Leuven, 3001, Leuven, Belgium.
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Rai N, Morales LO, Aphalo PJ. Perception of solar UV radiation by plants: photoreceptors and mechanisms. PLANT PHYSIOLOGY 2021; 186:1382-1396. [PMID: 33826733 PMCID: PMC8260113 DOI: 10.1093/plphys/kiab162] [Citation(s) in RCA: 25] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/03/2020] [Accepted: 03/25/2021] [Indexed: 05/04/2023]
Abstract
About 95% of the ultraviolet (UV) photons reaching the Earth's surface are UV-A (315-400 nm) photons. Plant responses to UV-A radiation have been less frequently studied than those to UV-B (280-315 nm) radiation. Most previous studies on UV-A radiation have used an unrealistic balance between UV-A, UV-B, and photosynthetically active radiation (PAR). Consequently, results from these studies are difficult to interpret from an ecological perspective, leaving an important gap in our understanding of the perception of solar UV radiation by plants. Previously, it was assumed UV-A/blue photoreceptors, cryptochromes and phototropins mediated photomorphogenic responses to UV-A radiation and "UV-B photoreceptor" UV RESISTANCE LOCUS 8 (UVR8) to UV-B radiation. However, our understanding of how UV-A radiation is perceived by plants has recently improved. Experiments using a realistic balance between UV-B, UV-A, and PAR have demonstrated that UVR8 can play a major role in the perception of both UV-B and short-wavelength UV-A (UV-Asw, 315 to ∼350 nm) radiation. These experiments also showed that UVR8 and cryptochromes jointly regulate gene expression through interactions that alter the relative sensitivity to UV-B, UV-A, and blue wavelengths. Negative feedback loops on the action of these photoreceptors can arise from gene expression, signaling crosstalk, and absorption of UV photons by phenolic metabolites. These interactions explain why exposure to blue light modulates photomorphogenic responses to UV-B and UV-Asw radiation. Future studies will need to distinguish between short and long wavelengths of UV-A radiation and to consider UVR8's role as a UV-B/UV-Asw photoreceptor in sunlight.
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Affiliation(s)
- Neha Rai
- Organismal and Evolutionary Biology, Viikki Plant Science Center (ViPS), Faculty of Biological and Environmental Sciences, University of Helsinki, 00014 Helsinki, Finland
- Author for communication: . Present address: Department of Botany and Plant Biology, University of Geneva, Geneva, Switzerland
| | - Luis Orlando Morales
- School of Science and Technology, The Life Science Center-Biology, Örebro University, SE-70182 Örebro, Sweden
| | - Pedro José Aphalo
- Organismal and Evolutionary Biology, Viikki Plant Science Center (ViPS), Faculty of Biological and Environmental Sciences, University of Helsinki, 00014 Helsinki, Finland
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27
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Rahmouni M, Laouer H, Saliha Dahamna, Gali L, Bensouici C, Flamini G, Akkal S. Biological activities and phytochemical content of essential oil and methanol extracts of Ferula lutea (poir.) maire growing in Algeria. BIOCATALYSIS AND AGRICULTURAL BIOTECHNOLOGY 2021. [DOI: 10.1016/j.bcab.2021.102017] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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28
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Podolec R, Demarsy E, Ulm R. Perception and Signaling of Ultraviolet-B Radiation in Plants. ANNUAL REVIEW OF PLANT BIOLOGY 2021; 72:793-822. [PMID: 33636992 DOI: 10.1146/annurev-arplant-050718-095946] [Citation(s) in RCA: 54] [Impact Index Per Article: 18.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/27/2023]
Abstract
Ultraviolet-B (UV-B) radiation is an intrinsic fraction of sunlight that plants perceive through the UVR8 photoreceptor. UVR8 is a homodimer in its ground state that monomerizes upon UV-B photon absorption via distinct tryptophan residues. Monomeric UVR8 competitively binds to the substrate binding site of COP1, thus inhibiting its E3 ubiquitin ligase activity against target proteins, which include transcriptional regulators such as HY5. The UVR8-COP1 interaction also leads to the destabilization of PIF bHLH factor family members. Additionally, UVR8 directly interacts with and inhibits the DNA binding of a different set of transcription factors. Each of these UVR8 signaling mechanisms initiates nuclear gene expression changes leading to UV-B-induced photomorphogenesis and acclimation. The two WD40-repeat proteins RUP1 and RUP2 provide negative feedback regulation and inactivate UVR8 by facilitating redimerization. Here, we review the molecular mechanisms of the UVR8 pathway from UV-B perception and signal transduction to gene expression changes and physiological UV-B responses.
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Affiliation(s)
- Roman Podolec
- Department of Botany and Plant Biology, Section of Biology, Faculty of Sciences, University of Geneva, 1211 Geneva, Switzerland; , ,
- Institute of Genetics and Genomics of Geneva (iGE3), University of Geneva, 1211 Geneva, Switzerland
| | - Emilie Demarsy
- Department of Botany and Plant Biology, Section of Biology, Faculty of Sciences, University of Geneva, 1211 Geneva, Switzerland; , ,
| | - Roman Ulm
- Department of Botany and Plant Biology, Section of Biology, Faculty of Sciences, University of Geneva, 1211 Geneva, Switzerland; , ,
- Institute of Genetics and Genomics of Geneva (iGE3), University of Geneva, 1211 Geneva, Switzerland
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29
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Idris M, Seo N, Jiang L, Kiyota S, Hidema J, Iino M. UV-B signalling in rice: Response identification, gene expression profiling and mutant isolation. PLANT, CELL & ENVIRONMENT 2021; 44:1468-1485. [PMID: 33377203 DOI: 10.1111/pce.13988] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/26/2020] [Revised: 12/23/2020] [Accepted: 12/25/2020] [Indexed: 06/12/2023]
Abstract
Responses of rice seedlings to UV-B radiation (UV-B) were investigated, aiming to establish rice as a model plant for UV-B signalling studies. The growth of japonica rice coleoptiles, grown under red light, was inhibited by brief irradiation with UV-B, but not with blue light. The effective UV-B fluences (10-1 -103 μmol m-2 ) were much lower than those reported in Arabidopsis. The response was much less in indica rice cultivars and its extent varied among Oryza species. We next identified UV-B-specific anthocyanin accumulation in the first leaf of purple rice and used this visible phenotype to isolate mutants. Some isolated mutants were further characterized, and one was found to have a defect in the growth response. Using microarrays, we identified a number of genes that are regulated by low-fluence-rate UV-B in japonica coleoptiles. Some up-regulated genes were analysed by real-time PCR for UV-B specificity and the difference between japonica and indica. More than 70% of UV-B-regulated rice genes had no homologs in UV-B-regulated Arabidopsis genes. Many UV-B-regulated rice genes are related to plant hormones and especially to jasmonate biosynthetic and responsive genes in apparent agreement with the growth response. Possible involvement of two rice homologs of UVR8, a UV-B photoreceptor, is discussed.
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Affiliation(s)
- Muhammad Idris
- Botanical Gardens, Graduate School of Science, Osaka City University, Osaka, Japan
| | - Nobu Seo
- Botanical Gardens, Graduate School of Science, Osaka City University, Osaka, Japan
| | - Lei Jiang
- Botanical Gardens, Graduate School of Science, Osaka City University, Osaka, Japan
| | - Seiichiro Kiyota
- Office of General Administration, Advanced Analysis Center, National Agriculture and Food Research Organization, Tsukuba, Japan
| | - Jun Hidema
- Department of Molecular and Chemical Life Sciences, Graduate School of Life Sciences, Tohoku University, Sendai, Japan
| | - Moritoshi Iino
- Botanical Gardens, Graduate School of Science, Osaka City University, Osaka, Japan
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Roeber VM, Bajaj I, Rohde M, Schmülling T, Cortleven A. Light acts as a stressor and influences abiotic and biotic stress responses in plants. PLANT, CELL & ENVIRONMENT 2021; 44:645-664. [PMID: 33190307 DOI: 10.1111/pce.13948] [Citation(s) in RCA: 77] [Impact Index Per Article: 25.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/30/2020] [Revised: 10/19/2020] [Accepted: 11/09/2020] [Indexed: 05/18/2023]
Abstract
Light is important for plants as an energy source and a developmental signal, but it can also cause stress to plants and modulates responses to stress. Excess and fluctuating light result in photoinhibition and reactive oxygen species (ROS) accumulation around photosystems II and I, respectively. Ultraviolet light causes photodamage to DNA and a prolongation of the light period initiates the photoperiod stress syndrome. Changes in light quality and quantity, as well as in light duration are also key factors impacting the outcome of diverse abiotic and biotic stresses. Short day or shady environments enhance thermotolerance and increase cold acclimation. Similarly, shade conditions improve drought stress tolerance in plants. Additionally, the light environment affects the plants' responses to biotic intruders, such as pathogens or insect herbivores, often reducing growth-defence trade-offs. Understanding how plants use light information to modulate stress responses will support breeding strategies to enhance crop stress resilience. This review summarizes the effect of light as a stressor and the impact of the light environment on abiotic and biotic stress responses. There is a special focus on the role of the different light receptors and the crosstalk between light signalling and stress response pathways.
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Affiliation(s)
- Venja M Roeber
- Institute of Biology/Applied Genetics, Dahlem Centre of Plant Sciences (DCPS), Freie Universität Berlin, Berlin, Germany
| | - Ishita Bajaj
- Institute of Biology/Applied Genetics, Dahlem Centre of Plant Sciences (DCPS), Freie Universität Berlin, Berlin, Germany
| | - Mareike Rohde
- Institute of Biology/Applied Genetics, Dahlem Centre of Plant Sciences (DCPS), Freie Universität Berlin, Berlin, Germany
| | - Thomas Schmülling
- Institute of Biology/Applied Genetics, Dahlem Centre of Plant Sciences (DCPS), Freie Universität Berlin, Berlin, Germany
| | - Anne Cortleven
- Institute of Biology/Applied Genetics, Dahlem Centre of Plant Sciences (DCPS), Freie Universität Berlin, Berlin, Germany
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31
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UV Lighting in Horticulture: A Sustainable Tool for Improving Production Quality and Food Safety. HORTICULTURAE 2021. [DOI: 10.3390/horticulturae7010009] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Abstract
Ultraviolet (UV) is a component of solar radiation that can be divided into three types defined by waveband: UV-A (315–400 nm), UV-B (280–315 nm), and UV-C (<280 nm). UV light can influence the physiological responses of plants. Wavelength, intensity, and exposure have a great impact on plant growth and quality. Interaction between plants and UV light is regulated by photoreceptors such as UV Resistance Locus 8 (UVR8) that enables acclimation to UV-B stress. Although UV in high doses is known to damage quality and production parameters, some studies show that UV in low doses may stimulate biomass accumulation and the synthesis of healthy compounds that mainly absorb UV. UV exposure is known to induce variations in plant architecture, important in ornamental crops, increasing their economic value. Abiotic stress induced by UV exposure increases resistance to insects and pathogens, and reduce postharvest quality depletion. This review highlights the role that UV may play in plant growth, quality, photomorphogenesis, and abiotic/biotic stress resistance.
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Anja Dieleman J, Marjolein Kruidhof H, Weerheim K, Leiss K. LED Lighting Strategies Affect Physiology and Resilience to Pathogens and Pests in Eggplant ( Solanum melongena L.). FRONTIERS IN PLANT SCIENCE 2021; 11:610046. [PMID: 33519863 PMCID: PMC7838350 DOI: 10.3389/fpls.2020.610046] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/24/2020] [Accepted: 11/30/2020] [Indexed: 06/12/2023]
Abstract
Over the last decade, LED lighting has gained considerable interest as an energy-efficient supplemental light source in greenhouse horticulture that can change rapidly in intensity and spectral composition. Spectral composition not only affects crop physiology but may also affect the biology of pathogens, pests, and their natural enemies, both directly and indirectly through an impact on induced plant resistance. In this study, we investigated the effects of light spectrum against a background of sunlight on growth and development of Solanum melongena. These effects were related to the spectral effects on the establishment of populations of the predatory mite Amblyseius swirskii and plant resilience against the biotrophic fungus powdery mildew, the necrotrophic fungus botrytis, and the herbivorous arthropod Western flower thrips. The effects of a reduced red/far-red (R:FR) ratio were studied under two ratios of red to blue light. Far-red light either was supplied additionally to the photosynthetic photon flux density (PPFD) or partially replaced PPFD, while maintaining total photon flux density (PFD). Effects of white light or additional UV-B light on plant resilience was tested, compared to the reference (5% blue, 5% green, and 90% red light). Plant biomass in the vegetative phase increased when additional far-red light was supplied. Stem length increased with far-red, irrespective of PPFD and the percentage of blue light. In the generative phase, total shoot biomass and fruit fresh weights were higher under additional far-red light, followed by the treatments where far-red partly replaced PPFD. Far-red light increased biomass partitioning into the fruits, at the expense of the leaves. There were no differences in population growth of A. swirskii mites between light treatments, nor did light treatment have an effect on the vertical distribution of these predatory mites in the plants. The treatments with additional far-red light reduced the infection rate of powdery mildew, but increased botrytis infection. These differences might be due to the plant defenses acting against these pathogens evolving from two different regulatory pathways. These results show that positive effects of altered spectral compositions on physiological responses were only moderately compensated by increased susceptibility to fungal pathogens, which offers perspective for a sustainable greenhouse horticulture.
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33
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Pierik R, Ballaré CL. Control of Plant Growth and Defense by Photoreceptors: From Mechanisms to Opportunities in Agriculture. MOLECULAR PLANT 2021; 14:61-76. [PMID: 33276158 DOI: 10.1016/j.molp.2020.11.021] [Citation(s) in RCA: 41] [Impact Index Per Article: 13.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/08/2020] [Revised: 11/19/2020] [Accepted: 11/26/2020] [Indexed: 06/12/2023]
Abstract
Plants detect and respond to the proximity of competitors using light signals perceived by photoreceptor proteins. A low ratio of red to far-red radiation (R:FR ratio) is a key signal of competition that is sensed by the photoreceptor phytochrome B (phyB). Low R:FR ratios increase the synthesis of growth-related hormones, including auxin and gibberellins, promoting stem elongation and other shade-avoidance responses. Other photoreceptors that help plants to optimize their developmental configuration and resource allocation patterns in the canopy include blue light photoreceptors, such as cryptochromes and phototropins, and UV receptors, such as UVR8. All photoreceptors act by directly or indirectly controlling the activity of two major regulatory nodes for growth and development: the COP1/SPA ubiquitin E3 ligase complex and the PIF transcription factors. phyB is also an important modulator of hormonal pathways that regulate plant defense against herbivores and pathogens, including the jasmonic acid signaling pathway. In this Perspective, we discuss recent advances on the studies of the mechanisms that link photoreceptors with growth and defense. Understanding these mechanisms is important to provide a functional platform for breeding programs aimed at improving plant productivity, stress tolerance, and crop health in species of agronomic interest, and to manipulate the light environments in protected agriculture.
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Affiliation(s)
- Ronald Pierik
- Plant Ecophysiology, Department of Biology, Utrecht University, Padualaan 8, Utrecht 3584 CH, the Netherlands.
| | - Carlos L Ballaré
- IFEVA, Consejo Nacional de Investigaciones Científicas y Técnicas, Universidad de Buenos Aires, Ave. San Martín 4453, C1417DSE, Buenos Aires, Argentina; IIBIO-INTECH, Consejo Nacional de Investigaciones Científicas y Técnicas, Universidad Nacional de San Martín, B1650HMP, Buenos Aires, Argentina.
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34
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Vanhaelewyn L, Van Der Straeten D, De Coninck B, Vandenbussche F. Ultraviolet Radiation From a Plant Perspective: The Plant-Microorganism Context. FRONTIERS IN PLANT SCIENCE 2020; 11:597642. [PMID: 33384704 PMCID: PMC7769811 DOI: 10.3389/fpls.2020.597642] [Citation(s) in RCA: 35] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/21/2020] [Accepted: 11/19/2020] [Indexed: 05/20/2023]
Abstract
Ultraviolet (UV) radiation directly affects plants and microorganisms, but also alters the species-specific interactions between them. The distinct bands of UV radiation, UV-A, UV-B, and UV-C have different effects on plants and their associated microorganisms. While UV-A and UV-B mainly affect morphogenesis and phototropism, UV-B and UV-C strongly trigger secondary metabolite production. Short wave (<350 nm) UV radiation negatively affects plant pathogens in direct and indirect ways. Direct effects can be ascribed to DNA damage, protein polymerization, enzyme inactivation and increased cell membrane permeability. UV-C is the most energetic radiation and is thus more effective at lower doses to kill microorganisms, but by consequence also often causes plant damage. Indirect effects can be ascribed to UV-B specific pathways such as the UVR8-dependent upregulated defense responses in plants, UV-B and UV-C upregulated ROS accumulation, and secondary metabolite production such as phenolic compounds. In this review, we summarize the physiological and molecular effects of UV radiation on plants, microorganisms and their interactions. Considerations for the use of UV radiation to control microorganisms, pathogenic as well as non-pathogenic, are listed. Effects can be indirect by increasing specialized metabolites with plant pre-treatment, or by directly affecting microorganisms.
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Affiliation(s)
- Lucas Vanhaelewyn
- Laboratory of Functional Plant Biology, Department of Biology, Ghent University, Ghent, Belgium
| | | | - Barbara De Coninck
- Plant Health and Protection Laboratory, Division of Crop Biotechnics, Department of Biosystems, KU Leuven, Leuven, Belgium
| | - Filip Vandenbussche
- Laboratory of Functional Plant Biology, Department of Biology, Ghent University, Ghent, Belgium
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35
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Angrish A, Kumar R, Chauhan R, Sharma V. On the IR spectroscopy and chemometric based rapid and non-destructive method for the investigation of sunscreen stains: Application in forensic science. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2020; 242:118708. [PMID: 32731143 DOI: 10.1016/j.saa.2020.118708] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/02/2020] [Revised: 07/12/2020] [Accepted: 07/14/2020] [Indexed: 06/11/2023]
Abstract
Cosmetic products such as sunscreens may often be encountered in forensic investigations as traces left on tissue paper, apparels, drinkware, painted exterior, or various alternative surfaces. The pilot study aimed at efficiently using Infrared spectroscopy coupled with chemometrics to cater to unbiased, rapid, and non-destructive identification of sunscreens which will aid various forensic investigations soon. In the present research, a total of 109 sunscreen samples were analyzed using Attenuated Total Reflectance Fourier Transform Infrared (ATR-FTIR) spectroscopy. The physicochemical data from the FTIR instrument was then subjected to principal component analysis (PCA), which successfully distinguished most of the samples based on their spectral information. The trained model resulted in clear segregation of unknown sunscreen samples. This could provide an outstanding level of confidence during the conduction of 'questioned versus known' comparisons of similar sunscreens and will give the details of the manufacturer, thereby, helping in rounding off the suspects.
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Affiliation(s)
- Arpita Angrish
- Institute of Forensic Science & Criminology, Panjab University, Chandigarh 160014, India
| | - Raj Kumar
- Institute of Forensic Science & Criminology, Panjab University, Chandigarh 160014, India
| | - Rohini Chauhan
- Institute of Forensic Science & Criminology, Panjab University, Chandigarh 160014, India
| | - Vishal Sharma
- Institute of Forensic Science & Criminology, Panjab University, Chandigarh 160014, India.
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36
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Li X, Liu Z, Ren H, Kundu M, Wang L, Gao J, Zhong D. Dynamics and mechanism of light harvesting in UV photoreceptor UVR8. Chem Sci 2020; 11:12553-12569. [PMID: 34094455 PMCID: PMC8163212 DOI: 10.1039/d0sc04909c] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
Photosynthetic pigments form light-harvesting networks to enable nearly perfect quantum efficiency in photosynthesis via excitation energy transfer. However, similar light-harvesting mechanisms have not been reported in light sensing processes in other classes of photoreceptors during light-mediated signaling. Here, based on our earlier report, we mapped out a striking energy-transfer network composed of 26 structural tryptophan residues in the plant UV-B photoreceptor UVR8. The spectra of the tryptophan chromophores are tuned by the protein environments, funneling all excitation energy to a cluster of four tryptophan residues, a pyramid center, where the excitation-induced monomerization is initiated for cell signaling. With extensive site-directed mutagenesis, various time-resolved fluorescence techniques, and combined QM/MM simulations, we determined the energy-transfer rates for all donor–acceptor pairs, revealing the time scales from tens of picoseconds to nanoseconds. The overall light harvesting quantum efficiency by the pyramid center is significantly increased to 73%, compared to a direct excitation probability of 35%. UVR8 is the only photoreceptor discovered so far using a natural amino-acid tryptophan without utilizing extrinsic chromophores to form a network to carry out both light harvesting and light perception for biological functions. The light-harvesting network from distal and peripheral to central tryptophans with transfer efficiencies determined from measured energy-transfer rates.![]()
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Affiliation(s)
- Xiankun Li
- Department of Physics, Department of Chemistry and Biochemistry, Programs of Biophysics, Chemical Physics and Biochemistry, The Ohio State University Columbus OH 43210 USA .,Center for Ultrafast Science and Technology, School of Physics and Astronomy, School of Chemistry and Chemical Engineering, Shanghai Jiao Tong University Shanghai 200240 China
| | - Zheyun Liu
- Department of Physics, Department of Chemistry and Biochemistry, Programs of Biophysics, Chemical Physics and Biochemistry, The Ohio State University Columbus OH 43210 USA
| | - Haisheng Ren
- Department of Chemistry and Supercomputing Institute, University of Minnesota Minneapolis MN 55455 USA .,College of Chemical Engineering, Sichuan University Chengdu 610065 China
| | - Mainak Kundu
- Department of Physics, Department of Chemistry and Biochemistry, Programs of Biophysics, Chemical Physics and Biochemistry, The Ohio State University Columbus OH 43210 USA
| | - Lijuan Wang
- Department of Physics, Department of Chemistry and Biochemistry, Programs of Biophysics, Chemical Physics and Biochemistry, The Ohio State University Columbus OH 43210 USA
| | - Jiali Gao
- Department of Chemistry and Supercomputing Institute, University of Minnesota Minneapolis MN 55455 USA .,School of Chemical Biology and Biotechnology, Peking University Shenzhen Graduate School Shenzhen 518055 China.,Institute of Systems and Physical Biology, Shenzhen Bay Laboratory Shenzhen 518055 China
| | - Dongping Zhong
- Department of Physics, Department of Chemistry and Biochemistry, Programs of Biophysics, Chemical Physics and Biochemistry, The Ohio State University Columbus OH 43210 USA .,Center for Ultrafast Science and Technology, School of Physics and Astronomy, School of Chemistry and Chemical Engineering, Shanghai Jiao Tong University Shanghai 200240 China
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37
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Lin L, Dong H, Yang G, Yin R. The C-terminal 17 amino acids of the photoreceptor UVR8 is involved in the fine-tuning of UV-B signaling. JOURNAL OF INTEGRATIVE PLANT BIOLOGY 2020; 62:1327-1340. [PMID: 32492260 DOI: 10.1111/jipb.12977] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/10/2020] [Accepted: 06/01/2020] [Indexed: 05/26/2023]
Abstract
Plant UV-B responses are mediated by the photoreceptor UV RESISTANCE LOCUS 8 (UVR8). In response to UV-B irradiation, UVR8 homodimers dissociate into monomers that bind to the E3 ubiquitin ligase CONSTITUTIVE PHOTOMORPHOGENIC1 (COP1). The interaction of the C27 domain in the C-terminal tail of UVR8 with the WD40 domain of COP1 is critical for UV-B signaling. However, the function of the last 17 amino acids (C17) of the C-terminus of UVR8, which are adjacent to C27, is unknown, although they are largely conserved in land plants. In this study, we established that Arabidopsis thaliana UVR8 C17 binds to full-length UVR8, but not to COP1, and reduces COP1 binding to the remaining portion of UVR8, including C27. We hypothesized that overexpression of C17 in a wild-type background would have a dominant negative effect on UVR8 activity; however, C17 overexpression caused strong silencing of endogenous UVR8, precluding a detailed analysis. We therefore generated YFP-UVR8N423 transgenic lines, in which C17 was deleted, to examine C17 function indirectly. YFP-UVR8N423 was more active than YFP-UVR8, suggesting that C17 inhibits UV-B signaling by attenuating binding between C27 and COP1. Our study reveals an inhibitory role for UVR8 C17 in fine-tuning UVR8-COP1 interactions during UV-B signaling.
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Affiliation(s)
- Li Lin
- Joint Center for Single Cell Biology, Key Laboratory of Urban Agriculture Ministry of Agriculture, School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai, 200240, China
| | - Huaxi Dong
- Joint Center for Single Cell Biology, Key Laboratory of Urban Agriculture Ministry of Agriculture, School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai, 200240, China
| | - Guoqian Yang
- Joint Center for Single Cell Biology, Key Laboratory of Urban Agriculture Ministry of Agriculture, School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai, 200240, China
| | - Ruohe Yin
- Joint Center for Single Cell Biology, Key Laboratory of Urban Agriculture Ministry of Agriculture, School of Agriculture and Biology, Shanghai Jiao Tong University, Shanghai, 200240, China
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38
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Watanabe M, Walther D, Ueda Y, Kondo K, Ishikawa S, Tohge T, Burgos A, Brotman Y, Fernie AR, Hoefgen R, Wissuwa M. Metabolomic markers and physiological adaptations for high phosphate utilization efficiency in rice. PLANT, CELL & ENVIRONMENT 2020; 43:2066-2079. [PMID: 32361994 DOI: 10.1111/pce.13777] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/18/2019] [Revised: 04/14/2020] [Accepted: 04/17/2020] [Indexed: 06/11/2023]
Abstract
Utilizing phosphate more efficiently is crucial for sustainable crop production. Highly efficient rice (Oryza sativa) cultivars have been identified and this study aims to identify metabolic markers associated with P utilization efficiency (PUE). P deficiency generally reduced leaf P concentrations and CO2 assimilation rates but efficient cultivars were reducing leaf P concentrations further than inefficient ones while maintaining similar CO2 assimilation rates. Adaptive changes in carbon metabolism were detected but equally in efficient and inefficient cultivar groups. Groups furthermore did not differ with respect to partial substitutions of phospholipids by sulfo- and galactolipids. Metabolites significantly more abundant in the efficient group, such as sinapate, benzoate and glucoronate, were related to antioxidant defence and may help alleviating oxidative stress caused by P deficiency. Sugar alcohols ribitol and threitol were another marker metabolite for higher phosphate efficiency as were several amino acids, especially threonine. Since these metabolites are not known to be associated with P deficiency, they may provide novel clues for the selection of more P efficient genotypes. In conclusion, metabolite signatures detected here were not related to phosphate metabolism but rather helped P efficient lines to keep vital processes functional under the adverse conditions of P starvation.
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Affiliation(s)
- Mutsumi Watanabe
- MPI of Molecular Plant Physiology, Potsdam, Germany
- NARA Institute of Science and Technology, Nara, Japan
| | - Dirk Walther
- MPI of Molecular Plant Physiology, Potsdam, Germany
| | - Yoshiaki Ueda
- Japan International Research Center for Agricultural Sciences (JIRCAS), Tsukuba, Japan
| | - Katsuhiko Kondo
- Japan International Research Center for Agricultural Sciences (JIRCAS), Tsukuba, Japan
| | - Satoru Ishikawa
- National Agriculture and Food Research Organization (NARO), Tsukuba, Japan
| | - Takayuki Tohge
- MPI of Molecular Plant Physiology, Potsdam, Germany
- NARA Institute of Science and Technology, Nara, Japan
| | | | | | | | | | - Matthias Wissuwa
- Japan International Research Center for Agricultural Sciences (JIRCAS), Tsukuba, Japan
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39
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Li X, Ren H, Kundu M, Liu Z, Zhong FW, Wang L, Gao J, Zhong D. A leap in quantum efficiency through light harvesting in photoreceptor UVR8. Nat Commun 2020; 11:4316. [PMID: 32859932 PMCID: PMC7455749 DOI: 10.1038/s41467-020-17838-6] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/11/2020] [Accepted: 07/17/2020] [Indexed: 11/09/2022] Open
Abstract
Plants utilize a UV-B (280 to 315 nm) photoreceptor UVR8 (UV RESISTANCE LOCUS 8) to sense environmental UV levels and regulate gene expression to avoid harmful UV effects. Uniquely, UVR8 uses intrinsic tryptophan for UV-B perception with a homodimer structure containing 26 structural tryptophan residues. However, besides 8 tryptophans at the dimer interface to form two critical pyramid perception centers, the other 18 tryptophans’ functional role is unknown. Here, using ultrafast fluorescence spectroscopy, computational methods and extensive mutations, we find that all 18 tryptophans form light-harvesting networks and funnel their excitation energy to the pyramid centers to enhance light-perception efficiency. We determine the timescales of all elementary tryptophan-to-tryptophan energy-transfer steps in picoseconds to nanoseconds, in excellent agreement with quantum computational calculations, and finally reveal a significant leap in light-perception quantum efficiency from 35% to 73%. This photoreceptor is the first system discovered so far, to be best of our knowledge, using natural amino-acid tryptophans to form networks for both light harvesting and light perception. Photoreceptor UVR8 in plants senses environmental UV levels through 26 structural tryptophan residues, but the role of 18 of them was unknown. The authors show, by experiments and computations, how these form a light-harvesting network that funnels the excitation to the pyramid centers enhancing the light-perception efficiency.
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Affiliation(s)
- Xiankun Li
- Department of Physics, Department of Chemistry and Biochemistry, Programs of Biophysics, Chemical Physics and Biochemistry, The Ohio State University, Columbus, OH, 43210, USA.,Center for Ultrafast Science and Technology, School of Physics and Astronomy, School of Chemistry and Chemical Engineering, Shanghai Jiao Tong University, Shanghai, 200240, China
| | - Haisheng Ren
- Department of Chemistry and Supercomputing Institute, University of Minnesota, Minneapolis, MN, 55455, USA.,College of Chemical Engineering, Sichuan University, Chengdu, 610065, China
| | - Mainak Kundu
- Department of Physics, Department of Chemistry and Biochemistry, Programs of Biophysics, Chemical Physics and Biochemistry, The Ohio State University, Columbus, OH, 43210, USA
| | - Zheyun Liu
- Department of Physics, Department of Chemistry and Biochemistry, Programs of Biophysics, Chemical Physics and Biochemistry, The Ohio State University, Columbus, OH, 43210, USA
| | - Frank W Zhong
- Department of Physics, Department of Chemistry and Biochemistry, Programs of Biophysics, Chemical Physics and Biochemistry, The Ohio State University, Columbus, OH, 43210, USA.,Cell and Molecular Biology Program, University of Chicago, Chicago, IL, 60637, USA
| | - Lijuan Wang
- Department of Physics, Department of Chemistry and Biochemistry, Programs of Biophysics, Chemical Physics and Biochemistry, The Ohio State University, Columbus, OH, 43210, USA
| | - Jiali Gao
- Department of Chemistry and Supercomputing Institute, University of Minnesota, Minneapolis, MN, 55455, USA. .,School of Chemical Biology and Biotechnology, Peking University Shenzhen Graduate School, Shenzhen, 518055, China.
| | - Dongping Zhong
- Department of Physics, Department of Chemistry and Biochemistry, Programs of Biophysics, Chemical Physics and Biochemistry, The Ohio State University, Columbus, OH, 43210, USA. .,Center for Ultrafast Science and Technology, School of Physics and Astronomy, School of Chemistry and Chemical Engineering, Shanghai Jiao Tong University, Shanghai, 200240, China.
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40
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Aarrouf J, Urban L. Flashes of UV-C light: An innovative method for stimulating plant defences. PLoS One 2020; 15:e0235918. [PMID: 32645090 PMCID: PMC7347194 DOI: 10.1371/journal.pone.0235918] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/02/2020] [Accepted: 06/25/2020] [Indexed: 12/04/2022] Open
Abstract
Leaves of lettuce, pepper, tomato and grapevine plants grown in greenhouse conditions were exposed to UV-C light for either 60 s or 1 s, using a specific LEDs-based device, and wavelengths and energy were the same among different light treatments. Doses of UV-C light that both effectively stimulated plant defences and were innocuous were determined beforehand. Tomato plants and lettuce plants were inoculated with Botrytis cinerea, pepper plants with Phytophthora capsici, and grapevine with Plasmopara viticola. In some experiments we investigated the effect of a repetition of treatments over periods of several days. All plants were inoculated 48 h after exposure to the last UV-C treatment. Lesions on surfaces were measured up to 12 days after inoculation, depending on the experiment and the pathogen. The results confirmed that UV-C light stimulates plant resistance; they show that irradiation for one second is more effective than irradiation for 60 s, and that repetition of treatments is more effective than single light treatments. Moreover a systemic effect was observed in unexposed leaves that were close to exposed leaves. The mechanisms of perception and of the signalling and metabolic pathways triggered by flashes of UV-C light vs. 60 s irradiation exposures are briefly discussed, as well as the prospects for field use of UV-C flashes in viticulture and horticulture.
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41
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Liu X, Xue C, Kong L, Li R, Xu Z, Hua J. Interactive Effects of Light Quality and Temperature on Arabidopsis Growth and Immunity. PLANT & CELL PHYSIOLOGY 2020; 61:933-941. [PMID: 32091601 DOI: 10.1093/pcp/pcaa020] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/24/2020] [Accepted: 02/17/2020] [Indexed: 05/20/2023]
Abstract
We report here the interactive effects of three light qualities (white, red and blue) and three growth temperatures (16�C, 22�C and 28�C) on rosette growth, hypocotyl elongation and disease resistance in Arabidopsis thaliana. While an increase in temperature promotes hypocotyl elongation irrespective of light quality, the effects of temperature on rosette growth and disease resistance are dependent on light quality. Maximum rosette growth rate under white, red and blue light are observed at 28�C, 16�C and 22�C, respectively. The highest disease resistance is observed at 16�C under all three light conditions, but the highest susceptibility is observed at 28�C for white light and 22�C for red and blue light. Interestingly, rosette growth is inhibited by phytochrome B (PHYB) under blue light at 28�C and by cryptochromes (CRYs) under red light at 16�C. In addition, disease resistance is inhibited by PHYB under blue light and promoted by CRYs under red light. Therefore, this study reveals a complex interaction between light and temperature in modulating rosette growth and disease resistance as well as the contribution of PHYB and CRY to disease resistance.
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Affiliation(s)
- Xiaoying Liu
- College of Agriculture, Nanjing Agricultural University, Nanjing 210095, China
- School of Integrated Plant Science, Plant Biology Section, Cornell University, Ithaca, NY 14853, USA
| | - Chunmei Xue
- School of Integrated Plant Science, Plant Biology Section, Cornell University, Ithaca, NY 14853, USA
| | - Le Kong
- College of Agriculture, Nanjing Agricultural University, Nanjing 210095, China
| | - Ruining Li
- College of Agriculture, Nanjing Agricultural University, Nanjing 210095, China
| | - Zhigang Xu
- College of Agriculture, Nanjing Agricultural University, Nanjing 210095, China
| | - Jian Hua
- School of Integrated Plant Science, Plant Biology Section, Cornell University, Ithaca, NY 14853, USA
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Neugart S, Hideg É, Czégény G, Schreiner M, Strid Å. Ultraviolet-B radiation exposure lowers the antioxidant capacity in the Arabidopsis thaliana pdx1.3-1 mutant and leads to glucosinolate biosynthesis alteration in both wild type and mutant. Photochem Photobiol Sci 2020; 19:217-228. [PMID: 31961357 DOI: 10.1039/c9pp00342h] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
Abstract
Pyridoxine (vitamin B6) and its vitamers are used by living organisms both as enzymatic cofactors and as antioxidants. We used Arabidopsis pyridoxine biosynthesis mutant pdx1.3-1 to study the involvement of the PLP-synthase main polypeptide PDX1 in plant responses to ultraviolet radiation of two different qualities, one containing primarily UV-A (315-400 nm) and the other containing both UV-A and UV-B (280-315 nm). The antioxidant capacity and the flavonoid and glucosinolate (GS) profiles were examined. As an indicator of stress, Fv/Fm of photosystem II reaction centers was used. In pdx1.3-1, UV-A + B exposure led to a significant 5% decrease in Fv/Fm on the last day (day 15), indicating mild stress at this time point. The antioxidant capacity of Col-0 wildtype increased significantly (50-73%) after 1 and 3 days of UV-A + B. Instead, in pdx1.3-1, the antioxidant capacity significantly decreased by 44-52% over the same time period, proving the importance of a full complement of functional PDX1 genes for the detoxification of reactive oxygen species. There were no significant changes in the flavonoid glycoside profile under any light condition. However, the GS profile was significantly altered, both with respect to Arabidopsis accession and exposure to UV. The difference in flavonoid and GS profiles reflects that the GS biosynthesis pathway contains at least one pyridoxine-dependent enzyme, whereas no such enzyme is used in flavonoid biosynthesis. Also, there was strong correlation between the antioxidant capacity and the content of some GS compounds. Our results show that vitamin B6 vitamers, functioning both as antioxidants and co-factors, are of importance for the physiological fitness of plants.
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Affiliation(s)
- Susanne Neugart
- Division of Quality and Sensory of Plant Products, University of Göttingen, Göttingen, Germany
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Azarafshan M, Peyvandi M, Abbaspour H, Noormohammadi Z, Majd A. The effects of UV-B radiation on genetic and biochemical changes of Pelargonium graveolens L'Her. PHYSIOLOGY AND MOLECULAR BIOLOGY OF PLANTS : AN INTERNATIONAL JOURNAL OF FUNCTIONAL PLANT BIOLOGY 2020; 26:605-616. [PMID: 32205934 PMCID: PMC7078430 DOI: 10.1007/s12298-020-00758-6] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/03/2019] [Revised: 12/08/2019] [Accepted: 01/02/2020] [Indexed: 06/10/2023]
Abstract
Ultraviolet radiation induces biochemical and genetic changes in plants. The aim of this study was to investigate the effects of UV-B radiation on genetic stability, phenolic compounds and antioxidant activity of Pelargonium graveolens L'Her. Plant cuttings were exposed to 0, 0.12. 0.26 and 0.38 W/m2 of UV-B radiation. Results indicated that by increasing the UV-B radiation intensity, total phenols, flavonoids and anthocyanin contents, Phenylalanine ammonia lyase activity and antioxidant capacity were increased. Analysis of four flavonols (quercetin, myricetin, kaempferol and rutin) contents of leaves extract by HPLC indicated that these four flavonols were enhanced in all treated plants and also the ratio of quercetin to kaempferol (Q/K) showed a significant increase (P ≤ 0.05) in UV-B treated plants in compare to control. To evaluate the genetic variation in treated plants, 10 ISSR primers were used. The highest level of percentage of polymorphism (P%), Shannon index (I), number of effective allele (Ne) and Nei' genetic diversity (He), were observed at the highest UV-B radiation (0.38 W/m2). The AMOVA analysis also showed a significant genetic differentiation (P ≥ 0.001) among the studied groups, and confirmed the differentiation of groups obtained by the cluster analysis of molecular data. Overall, these results showed that biochemical changes in different intensities of UV-B were in line with genetic variations, so that the highest biochemical and genetic variations were observed in 0.38 W/m2 treatment.
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Affiliation(s)
- Marjan Azarafshan
- Department of Biology, Faculty of Biological Science, North Tehran Branch, Islamic Azad University, Tehran, Iran
| | - Maryam Peyvandi
- Department of Biology, Faculty of Biological Science, North Tehran Branch, Islamic Azad University, Tehran, Iran
| | - Hossein Abbaspour
- Department of Biology, Faculty of Biological Science, North Tehran Branch, Islamic Azad University, Tehran, Iran
| | - Zahra Noormohammadi
- Department of Biology, Science and Research Branch, Islamic Azad University, Tehran, Iran
| | - Ahmad Majd
- Department of Biology, Faculty of Biological Science, North Tehran Branch, Islamic Azad University, Tehran, Iran
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Shamala LF, Zhou HC, Han ZX, Wei S. UV-B Induces Distinct Transcriptional Re-programing in UVR8-Signal Transduction, Flavonoid, and Terpenoids Pathways in Camellia sinensis. FRONTIERS IN PLANT SCIENCE 2020; 11:234. [PMID: 32194607 PMCID: PMC7062797 DOI: 10.3389/fpls.2020.00234] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/15/2019] [Accepted: 02/14/2020] [Indexed: 05/20/2023]
Abstract
Plants are known to respond to Ultraviolet-B radiation (UV-B: 280-320 nm) by generating phenolic metabolites which absorbs UV-B light. Phenolics are extraordinarily abundant in Camellia sinensis leaves and are considered, together with pleasant volatile terpenoids, as primary flavor determinants in tea beverages. In this study, we focused on the effects of UV-B exposure (at 35 μW cm-2 for 0, 0.5, 2, and 8 h) on tea transcriptional and metabolic alterations, specifically related to tea flavor metabolite production. Out of 34,737 unigenes, a total of 18,081 differentially expressed genes (DEGs) due to UV-B treatments were identified. Additionally, the phenylpropanoid pathway was found as one of the most significantly UV-B affected top 20 KEGG pathways while flavonoid and monoterpenoid pathway-related genes were enhanced at 0.5 h. In the UVR8-signal transduction pathway, UVR8 was suppressed at both short and long exposure of UV-B with genes downstream differentially expressed. Divergent expression of MYB4 at different treatments could have differentially altered structural and regulatory genes upstream of flavonoid biosynthesis pathways. Suppression of MYB4-1&3 at 0.5 h could have led to the up-regulation of structural CCOAOMT-1&2, HST-1&2, DFR-4, ANR-2, and LAR-1&3 genes resulting in accumulation of specialized metabolites at a shorter duration of UV-B exposure. Specialized metabolite profiling revealed the correlated alterations in the abundances of catechins and some volatile terpenoids in all the treatments with significant accumulation of specialized metabolites at 0.5 h treatment. A significant increase in specialized metabolites at 0.5 h treatment and no significant alteration observed at longer UVB treatment suggested that shorter exposure to UV-B led to different display in gene expression and accumulation of specialized metabolites in tea shoots in response to UV-B stress. Taken together, our results indicated that the UV-B treatment applied in this study differentially altered the UVR8-signal transduction, flavonoid and terpenoid pathways at transcriptional and metabolic levels in tea plants. Our results show strong potential for UV-B application in flavor improvement in tea at the industrial level.
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Affiliation(s)
- Lubobi Ferdinand Shamala
- State Key Laboratory of Tea Plant Biology and Utilization, Anhui Agricultural University, Hefei, China
- School of Life Sciences, Anhui Agricultural University, Hefei, China
| | - Han-Chen Zhou
- State Key Laboratory of Tea Plant Biology and Utilization, Anhui Agricultural University, Hefei, China
- Tea Research Institute, Anhui Academy of Agricultural Sciences, Huangshan, China
| | - Zhuo-Xiao Han
- State Key Laboratory of Tea Plant Biology and Utilization, Anhui Agricultural University, Hefei, China
| | - Shu Wei
- State Key Laboratory of Tea Plant Biology and Utilization, Anhui Agricultural University, Hefei, China
- *Correspondence: Shu Wei, ;
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45
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McLay ER, Pontaroli AC, Wargent JJ. UV-B Induced Flavonoids Contribute to Reduced Biotrophic Disease Susceptibility in Lettuce Seedlings. FRONTIERS IN PLANT SCIENCE 2020; 11:594681. [PMID: 33250915 PMCID: PMC7673382 DOI: 10.3389/fpls.2020.594681] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/14/2020] [Accepted: 10/09/2020] [Indexed: 05/18/2023]
Abstract
Biotrophic disease is one of the largest causes of decreased yield in agriculture. While exposure to ultraviolet B (UV-B) light (280-320 nm) has been previously observed to reduce plant susceptibility to disease, there is still a paucity of information regarding underlying biological mechanisms. In addition, recent advances in UV-LED technology raise the prospect of UV light treatments in agriculture which are practical and efficient. Here, we characterized the capability of UV-B LED pre-treatments to reduce susceptibility of a range of lettuce (Lactuca sativa) cultivars to downy mildew disease caused by the obligate biotroph Bremia lactucae. Innate cultivar susceptibility level did not seem to influence the benefit of a UV-B induced disease reduction with similar reductions as a percentage of the control observed (54-62% decrease in conidia count) across all susceptible cultivars. UV-B-induced reductions to conidia counts were sufficient to significantly reduce the infectivity of the diseased plant. Secondary infections caused by UV-B pre-treated plants exhibited yet further (67%) reduced disease severity. UV-B-induced flavonoids may in part mediate this reduced disease severity phenotype, as B. lactucae conidia counts of lettuce plants negatively correlated with flavonoid levels in a UV-B-dependent manner (r = -0.81). Liquid chromatography-mass spectrometry (LC-MS) was used to identify metabolic features which contribute to this correlation and, of these, quercetin 3-O-(6"-O-malonyl)-b-D-glucoside had the strongest negative correlation with B. lactucae conidia count (r = -0.68). When quercetin 3-O-(6"-O-malonyl)-b-D-glucoside was directly infiltrated into lettuce leaves, with those leaves subsequently infected, the B. lactucae conidia count was reduced (25-39%) in two susceptible lettuce cultivars. We conclude that UV-B induced phenolics, in particular quercetin flavonoids, may act as phytoanticipins to limit the establishment of biotrophic pathogens thus delaying or reducing their sporulation as measured by conidia count. These findings highlight the opportunity for UV-B morphogenesis to be exploited through the application of UV-LED technology, as part of the development of next-generation, sustainable disease control tools.
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Affiliation(s)
- Emily R. McLay
- School of Agriculture and Environment, College of Sciences, Massey University, Palmerston North, New Zealand
- BioLumic Limited, Palmerston North, New Zealand
| | | | - Jason J. Wargent
- School of Agriculture and Environment, College of Sciences, Massey University, Palmerston North, New Zealand
- BioLumic Limited, Palmerston North, New Zealand
- *Correspondence: Jason J. Wargent,
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46
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Palma CFF, Castro-Alves V, Morales LO, Rosenqvist E, Ottosen CO, Strid Å. Spectral Composition of Light Affects Sensitivity to UV-B and Photoinhibition in Cucumber. FRONTIERS IN PLANT SCIENCE 2020; 11:610011. [PMID: 33469462 PMCID: PMC7813804 DOI: 10.3389/fpls.2020.610011] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/24/2020] [Accepted: 11/23/2020] [Indexed: 05/08/2023]
Abstract
Ultraviolet B (UV-B) (280-315 nm) and ultraviolet A (UV-A) (315-400 nm) radiation comprise small portions of the solar radiation but regulate many aspects of plant development, physiology and metabolism. Until now, how plants respond to UV-B in the presence of different light qualities is poorly understood. This study aimed to assess the effects of a low UV-B dose (0.912 ± 0.074 kJ m-2 day-1, at a 6 h daily UV exposure) in combination with four light treatments (blue, green, red and broadband white at 210 μmol m-2 s-1 Photosynthetically active radiation [PAR]) on morphological and physiological responses of cucumber (Cucumis sativus cv. "Lausanna RZ F1"). We explored the effects of light quality backgrounds on plant morphology, leaf gas exchange, chlorophyll fluorescence, epidermal pigment accumulation, and on acclimation ability to saturating light intensity. Our results showed that supplementary UV-B significantly decreased biomass accumulation in the presence of broad band white, blue and green light, but not under red light. UV-B also reduced the photosynthetic efficiency of CO2 fixation (α) when combined with blue light. These plants, despite showing high accumulation of anthocyanins, were unable to cope with saturating light conditions. No significant effects of UV-B in combination with green light were observed for gas exchange and chlorophyll fluorescence parameters, but supplementary UV-B significantly increased chlorophyll and flavonol contents in the leaf epidermis. Plants grown under red light and UV-B significantly increased maximum photosynthetic rate and dark respiration compared to pure red light. Additionally, red and UV-B treated plants exposed to saturating light intensity showed higher quantum yield of photosystem II (PSII), fraction of open PSII centres and electron transport rate and showed no effect on the apparent maximum quantum efficiency of PSII photochemistry (Fv/Fm) or non-photochemical quenching, in contrast to solely red-light conditions. These findings provide new insights into how plants respond to UV-B radiation in the presence of different light spectra.
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Affiliation(s)
| | - Victor Castro-Alves
- School of Science and Technology, Örebro Life Science Centre, Örebro University, Örebro, Sweden
| | - Luis Orlando Morales
- School of Science and Technology, Örebro Life Science Centre, Örebro University, Örebro, Sweden
| | - Eva Rosenqvist
- Department of Plant and Environmental Sciences, Crop Sciences, University of Copenhagen, Taastrup, Denmark
| | - Carl-Otto Ottosen
- Department of Food Science, Plant, Food & Climate, Aarhus University, Aarhus, Denmark
- *Correspondence: Carl-Otto Ottosen,
| | - Åke Strid
- School of Science and Technology, Örebro Life Science Centre, Örebro University, Örebro, Sweden
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47
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Rai N, Neugart S, Yan Y, Wang F, Siipola SM, Lindfors AV, Winkler JB, Albert A, Brosché M, Lehto T, Morales LO, Aphalo PJ. How do cryptochromes and UVR8 interact in natural and simulated sunlight? JOURNAL OF EXPERIMENTAL BOTANY 2019; 70:4975-4990. [PMID: 31100755 PMCID: PMC6760287 DOI: 10.1093/jxb/erz236] [Citation(s) in RCA: 41] [Impact Index Per Article: 8.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/06/2018] [Accepted: 05/10/2019] [Indexed: 05/20/2023]
Abstract
Cryptochromes (CRYs) and UV RESISTANCE LOCUS 8 (UVR8) photoreceptors perceive UV-A/blue (315-500 nm) and UV-B (280-315 nm) radiation in plants, respectively. While the roles of CRYs and UVR8 have been studied in separate controlled-environment experiments, little is known about the interaction between these photoreceptors. Here, Arabidopsis wild-type Ler, CRYs and UVR8 photoreceptor mutants (uvr8-2, cry1cry2 and cry1cry2uvr8-2), and a flavonoid biosynthesis-defective mutant (tt4) were grown in a sun simulator. Plants were exposed to filtered radiation for 17 d or for 6 h, to study the effects of blue, UV-A, and UV-B radiation. Both CRYs and UVR8 independently enabled growth and survival of plants under solar levels of UV, while their joint absence was lethal under UV-B. CRYs mediated gene expression under blue light. UVR8 mediated gene expression under UV-B radiation, and in the absence of CRYs, also under UV-A. This negative regulation of UVR8-mediated gene expression by CRYs was also observed for UV-B. The accumulation of flavonoids was also consistent with this interaction between CRYs and UVR8. In conclusion, we provide evidence for an antagonistic interaction between CRYs and UVR8 and a role of UVR8 in UV-A perception.
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Affiliation(s)
- Neha Rai
- Organismal and Evolutionary Biology Research Programme, Viikki Plant Science Center, University of Helsinki, Helsinki, Finland
- Correspondence:
| | - Susanne Neugart
- Research Area of Plant Quality and Food Security, Leibniz Institute of Vegetable and Ornamental Crops e. V., 14979 Grossbeeren, Germany
| | - Yan Yan
- Organismal and Evolutionary Biology Research Programme, Viikki Plant Science Center, University of Helsinki, Helsinki, Finland
| | - Fang Wang
- Organismal and Evolutionary Biology Research Programme, Viikki Plant Science Center, University of Helsinki, Helsinki, Finland
| | - Sari M Siipola
- Organismal and Evolutionary Biology Research Programme, Viikki Plant Science Center, University of Helsinki, Helsinki, Finland
| | | | - Jana Barbro Winkler
- Research Unit Environmental Simulation, Helmholtz Zentrum München, Ingolstädter Landstrasse, Neuherberg, Germany
| | - Andreas Albert
- Research Unit Environmental Simulation, Helmholtz Zentrum München, Ingolstädter Landstrasse, Neuherberg, Germany
| | - Mikael Brosché
- Organismal and Evolutionary Biology Research Programme, Viikki Plant Science Center, University of Helsinki, Helsinki, Finland
| | - Tarja Lehto
- School of Forest Sciences, University of Eastern Finland, Joensuu, Finland
| | - Luis O Morales
- Organismal and Evolutionary Biology Research Programme, Viikki Plant Science Center, University of Helsinki, Helsinki, Finland
- Current address: School of Science & Technology, Örebro Life Science Center, Örebro University, SE-70182 Örebro, Sweden
| | - Pedro J Aphalo
- Organismal and Evolutionary Biology Research Programme, Viikki Plant Science Center, University of Helsinki, Helsinki, Finland
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48
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Barek S, Rahmoun NM, Aissaoui M, El Haci IA, Bensouici C, Choukchou-Braham EN. Phenolic Contents, Antioxidant, and Antibacterial Activities of the Algerian Genista saharae Solvent Extracts. ACTA ACUST UNITED AC 2019. [DOI: 10.1080/10496475.2019.1661327] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023]
Affiliation(s)
- Saïd Barek
- Laboratoire Antibiotiques Antifongiques: physico-chimie, synthèse et activité biologique, Departement of biology, Faculty of SNV-STU, Tlemcen University, Tlemcen, Algeria
| | - Nadjib Mohammed Rahmoun
- Laboratoire Antibiotiques Antifongiques: physico-chimie, synthèse et activité biologique, Departement of biology, Faculty of SNV-STU, Tlemcen University, Tlemcen, Algeria
| | - Mohammed Aissaoui
- Laboratoire Antibiotiques Antifongiques: physico-chimie, synthèse et activité biologique, Departement of biology, Faculty of SNV-STU, Tlemcen University, Tlemcen, Algeria
| | - Imad Abdelhamid El Haci
- Centre de Recherche scientifique et technique en Analyses Physico-Chimiques (CRAPC), Tipaza, Algérie
- Laboratoire de Produits Naturels, Département de Biologie, Faculté SNV-STU, Université Aboubekr Belkaïd, Tlemcen, Algérie
| | - Chawki Bensouici
- Centre de Recherche en Biotechnologie Ali Mendjli Nouvelle Ville, Constantine, Algérie
| | - Et Noureddine Choukchou-Braham
- Laboratoire de Catalyse et Synthèse en Chimie Organique, Département de chimie, Faculté des Sciences, Tlemcen University, Algeria
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49
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Zhao X, Luo J, Liu Y, Pandey P, Yang S, Wei D, Han K. Substitution Dependent Ultrafast Ultraviolet Energy Dissipation Mechanisms of Plant Sunscreens. J Phys Chem Lett 2019; 10:5244-5249. [PMID: 31436992 DOI: 10.1021/acs.jpclett.9b02175] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/28/2023]
Abstract
An ultraviolet energy dissipation mechanism plays a critical role in the photoprotection effect of sunscreens. In this work, we discovered substitution dependent UV energy dissipation mechanisms of model plant sunscreen methyl sinapate (MS). We found that the initially populated V(ππ*) states of MS and p-OMeMS relax to the ground state nonradiatively along an ultrafast trans-cis photoisomerization in tens of picoseconds. However, for p-HMS, an internal conversion from V(ππ*) to a relative dark V'(ππ*) state occurs in less than 1 ps, leading to a branching of the excited-state relaxations. The V (ππ*) state still relaxes nonradiatively as in the case of MS and p-OMeMS. In contrast, the V'(ππ*) state decays to the ground state mainly by emitting photons, exhibiting a lifetime as long as 5 ns. It is the first time to definitely distinguish the dynamics between V(ππ*) and V'(ππ*) states in the study of sinapates and cinnamates. These results indicate the anticipation of the V'(ππ*) state should be avoided when designing sunscreens.
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Affiliation(s)
- Xi Zhao
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics (DICP), Chinese Academy of Sciences, 457 Zhongshan Road, Dalian, Liaoning 116023, China
- University of Chinese Academy of Sciences, Beijing 10049, China
| | - Jian Luo
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics (DICP), Chinese Academy of Sciences, 457 Zhongshan Road, Dalian, Liaoning 116023, China
| | - Yan Liu
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics (DICP), Chinese Academy of Sciences, 457 Zhongshan Road, Dalian, Liaoning 116023, China
| | - Pramod Pandey
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics (DICP), Chinese Academy of Sciences, 457 Zhongshan Road, Dalian, Liaoning 116023, China
| | - Songqiu Yang
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics (DICP), Chinese Academy of Sciences, 457 Zhongshan Road, Dalian, Liaoning 116023, China
| | - Donghui Wei
- College of Chemistry and Molecular Engineering, Zhengzhou University, 100 Science Avenue, Zhengzhou, People's Republic of China
| | - Keli Han
- State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics (DICP), Chinese Academy of Sciences, 457 Zhongshan Road, Dalian, Liaoning 116023, China
- Institute of Molecular Sciences and Engineering, Shandong University, Qingdao 266237, P. R. China
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50
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O'Hara A, Headland LR, Díaz-Ramos LA, Morales LO, Strid Å, Jenkins GI. Regulation of Arabidopsis gene expression by low fluence rate UV-B independently of UVR8 and stress signaling. Photochem Photobiol Sci 2019; 18:1675-1684. [PMID: 31218318 DOI: 10.1039/c9pp00151d] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Abstract
UV-B exposure of plants regulates expression of numerous genes concerned with various responses. Sudden exposure of non-acclimated plants to high fluence rate, short wavelength UV-B induces expression via stress-related signaling pathways that are not specific to the UV-B stimulus, whereas low fluence rates of UV-B can regulate expression via the UV-B photoreceptor UV RESISTANCE LOCUS 8 (UVR8). However, there is little information about whether non-stressful, low fluence rate UV-B treatments can activate gene expression independently of UVR8. Here, transcriptomic analysis of wild-type and uvr8 mutant Arabidopsis exposed to low fluence rate UV-B showed that numerous genes were regulated independently of UVR8. Moreover, nearly all of these genes were distinct to those induced by stress treatments. A small number of genes were expressed at all UV-B fluence rates employed and may be concerned with activation of eustress responses that facilitate acclimation to changing conditions. Expression of the gene encoding the transcription factor ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 13 (ANAC13) was studied to characterise a low fluence rate, UVR8-independent response. ANAC13 is induced by as little as 0.1 μmol m-2 s-1 UV-B and its regulation is independent of components of the canonical UVR8 signaling pathway COP1 and HY5/HYH. Furthermore, UV-B induced expression of ANAC13 is independent of the photoreceptors CRY1, CRY2, PHOT1 and PHOT2 and phytochromes A, B, D and E. ANAC13 expression is induced over a range of UV-B wavelengths at low doses, with maximum response at 310 nm. This study provides a basis for further investigation of UVR8 and stress independent, low fluence rate UV-B signaling pathway(s).
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Affiliation(s)
- Andrew O'Hara
- Örebro Life Science Center, School of Science and Technology, Örebro University, SE-70182 Örebro, Sweden and Institute of Molecular, Cell and Systems Biology, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow G12 8QQ, UK.
| | - Lauren R Headland
- Institute of Molecular, Cell and Systems Biology, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow G12 8QQ, UK.
| | - L Aranzazú Díaz-Ramos
- Institute of Molecular, Cell and Systems Biology, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow G12 8QQ, UK.
| | - Luis O Morales
- Örebro Life Science Center, School of Science and Technology, Örebro University, SE-70182 Örebro, Sweden
| | - Åke Strid
- Örebro Life Science Center, School of Science and Technology, Örebro University, SE-70182 Örebro, Sweden
| | - Gareth I Jenkins
- Institute of Molecular, Cell and Systems Biology, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow G12 8QQ, UK.
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