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Aikpokpodion PE, Hsiao BS, Dimkpa CO. Mitigation of Nitrogen Losses in a Plant-Soil System through Incorporation of Nanocellulose and Zinc-Modified Nanocellulose. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2024; 72:17295-17305. [PMID: 39073884 DOI: 10.1021/acs.jafc.4c03997] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 07/31/2024]
Abstract
Most nitrogen (N) applied to plants as fertilizer is lost through leaching. Here, nanocellulose was used in mitigating N leaching loss. Lettuce-cropped soil was treated with unmodified or Zn-modified nanocellulose (1-2% by wt) in combination with NPK, compared with urea and NPK-only treatments. Consecutive leaching, plant growth, plant N uptake, and soil nitrogen retention were assessed. Nanocellulose + NPK significantly (p ≤ 0.05) reduced N leaching, compared with urea and NPK-only. 1-and-2 wt % nanocellulose, as well as Zn-modified 1-and-2 wt % nanocellulose, reduced N leaching by 45, 38, 39, and 49% compared with urea and by 43, 36, 37, and 47% compared with NPK-only, respectively. Nitrogen leached mainly as NO3- (98.4%). Compared with urea and NPK, lettuce shoot mass was significantly (p ≤ 0.05) increased by 30-42% and by 44-57%, respectively, by all nanocellulose treatments, except for the Zn-modified 1 wt % nanocellulose. Leached N negatively correlated to biomass yield. Soil N retention was enhanced by the pristine and Zn-modified nanocelluloses between 27 and 94%. Demonstrably, nanocellulose can be utilized for mitigating N loss in soil and supporting crop production, resource management, and environmental sustainability.
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Affiliation(s)
- Paul E Aikpokpodion
- Department of Analytical Chemistry, Connecticut Agricultural Experiment Station, New Haven, Connecticut 06511, United States
| | - Benjamin S Hsiao
- Department of Chemistry, Stony Brook University, Stony Brook, New York 11794-3400, United States
| | - Christian O Dimkpa
- Department of Analytical Chemistry, Connecticut Agricultural Experiment Station, New Haven, Connecticut 06511, United States
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Chen K, Xue W, Di X, Sun T, Gao W, Sun Y. Effects of nitrogen forms on Cd uptake and tolerance in wheat seedlings. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 936:173451. [PMID: 38782266 DOI: 10.1016/j.scitotenv.2024.173451] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/25/2024] [Revised: 04/25/2024] [Accepted: 05/20/2024] [Indexed: 05/25/2024]
Abstract
Hydroponic experiment was conducted to explore the effects of two nitrogen (N) levels with five nitrate nitrogen (NO3--N) and ammonium nitrogen (NH4+-N) ratios on the growth status and Cd migration patterns of wheat seedlings under Cd5 and Cd30 level. Results showed that higher Cd were detrimental to the growth, absorption of K and Ca, expression of genes mediating NO3--N and NH4+-N transport, which also increased the content of malondialdehyde (MDA) and hydrogen peroxide (H2O2) in shoots and roots of wheat seedlings. Higher N treatment alleviated the inhibitory effects of Cd stress on the biomass, root development, photosynthesis and increased the tolerance index of wheat seedlings. The ratio of NO3--N and NH4+-N was the main factor driving Cd accumulation in wheat seedlings, the combined application of NH4+-N and NO3--N was more conducive for the growth, nitrogen assimilation and Cd tolerance to the Cd stressed wheat seedlings. Increased NO3--N application rates significantly up-regulated the expression levels of TaNPF2.12, TaNRT2.2, increased NH4+-N application rates significantly up-regulated the expression levels of TaAMT1.1. The high proportion of NO3--N promoted the absorption of K, Ca and Cd in the shoots and roots of wheat seedlings, while NH4+-N was the opposite. Under low Cd conditions, the NO3--N to NH4+-N ratio of 1:1 was more conducive to the growth of wheat seedlings, under high Cd stress, the optimal of NO3--N to NH4+-N was 1:2 for inhibiting the accumulation of Cd in wheat seedlings. The results indicated that increasing NH4+-N ratio appropriately could inhibit wheat Cd uptake by increasing NH4+, K+ and Ca2+ for K and Ca channels, and promote wheat growth by promoting N assimilation process.
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Affiliation(s)
- Kexin Chen
- Key Laboratory of Original Agro-Environmental Pollution Prevention and Control, Agro-Environmental Protection Institute, Ministry of Agriculture and Rural Affairs, P.R. China, Tianjin 300191, China
| | - Weijie Xue
- Key Laboratory of Original Agro-Environmental Pollution Prevention and Control, Agro-Environmental Protection Institute, Ministry of Agriculture and Rural Affairs, P.R. China, Tianjin 300191, China.
| | - Xuerong Di
- Key Laboratory of Original Agro-Environmental Pollution Prevention and Control, Agro-Environmental Protection Institute, Ministry of Agriculture and Rural Affairs, P.R. China, Tianjin 300191, China
| | - Tao Sun
- Key Laboratory of Original Agro-Environmental Pollution Prevention and Control, Agro-Environmental Protection Institute, Ministry of Agriculture and Rural Affairs, P.R. China, Tianjin 300191, China
| | - Wei Gao
- College of Resources and Environment, Henan Agricultural University, No.218 Ping'an Avenue, Zhengzhou 450046, Henan, China; Henan Key Lab of Soil Pollution Control & Remediation, Henan Agricultural University, No.218 Ping'an Avenue, Zhengzhou 450046, Henan, China.
| | - Yuebing Sun
- Key Laboratory of Original Agro-Environmental Pollution Prevention and Control, Agro-Environmental Protection Institute, Ministry of Agriculture and Rural Affairs, P.R. China, Tianjin 300191, China.
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Wang D, Du M, Lyu P, Li J, Meng H, Liu X, Shi M, Gong Y, Sha Q, Men Q, Li X, Sun Y, Guo S. Functional Characterization of the Soybean Glycine max Actin Depolymerization Factor GmADF13 for Plant Resistance to Drought Stress. PLANTS (BASEL, SWITZERLAND) 2024; 13:1651. [PMID: 38931083 PMCID: PMC11207668 DOI: 10.3390/plants13121651] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/30/2024] [Revised: 05/31/2024] [Accepted: 06/12/2024] [Indexed: 06/28/2024]
Abstract
Abiotic stress significantly affects plant growth and has devastating effects on crop production. Drought stress is one of the main abiotic stressors. Actin is a major component of the cytoskeleton, and actin-depolymerizing factors (ADFs) are conserved actin-binding proteins in eukaryotes that play critical roles in plant responses to various stresses. In this study, we found that GmADF13, an ADF gene from the soybean Glycine max, showed drastic upregulation under drought stress. Subcellular localization experiments in tobacco epidermal cells and tobacco protoplasts showed that GmADF13 was localized in the nucleus and cytoplasm. We characterized its biological function in transgenic Arabidopsis and hairy root composite soybean plants. Arabidopsis plants transformed with GmADF13 displayed a more robust drought tolerance than wild-type plants, including having a higher seed germination rate, longer roots, and healthy leaves under drought conditions. Similarly, GmADF13-overexpressing (OE) soybean plants generated via the Agrobacterium rhizogenes-mediated transformation of the hairy roots showed an improved drought tolerance. Leaves from OE plants showed higher relative water, chlorophyll, and proline contents, had a higher antioxidant enzyme activity, and had decreased malondialdehyde, hydrogen peroxide, and superoxide anion levels compared to those of control plants. Furthermore, under drought stress, GmADF13 OE activated the transcription of several drought-stress-related genes, such as GmbZIP1, GmDREB1A, GmDREB2, GmWRKY13, and GmANK114. Thus, GmADF13 is a positive regulator of the drought stress response, and it may play an essential role in plant growth under drought stress conditions. These results provide new insights into the functional elucidation of soybean ADFs. They may be helpful for breeding new soybean cultivars with a strong drought tolerance and further understanding how ADFs help plants adapt to abiotic stress.
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Affiliation(s)
- Deying Wang
- School of Agricultural Science and Engineering, Liaocheng University, Liaocheng 252059, China; (D.W.); (M.D.); (P.L.); (J.L.); (H.M.); (X.L.); (M.S.); (Y.G.); (Q.S.); (Q.M.); (X.L.)
| | - Mengxue Du
- School of Agricultural Science and Engineering, Liaocheng University, Liaocheng 252059, China; (D.W.); (M.D.); (P.L.); (J.L.); (H.M.); (X.L.); (M.S.); (Y.G.); (Q.S.); (Q.M.); (X.L.)
| | - Peng Lyu
- School of Agricultural Science and Engineering, Liaocheng University, Liaocheng 252059, China; (D.W.); (M.D.); (P.L.); (J.L.); (H.M.); (X.L.); (M.S.); (Y.G.); (Q.S.); (Q.M.); (X.L.)
| | - Jingyu Li
- School of Agricultural Science and Engineering, Liaocheng University, Liaocheng 252059, China; (D.W.); (M.D.); (P.L.); (J.L.); (H.M.); (X.L.); (M.S.); (Y.G.); (Q.S.); (Q.M.); (X.L.)
| | - Huiran Meng
- School of Agricultural Science and Engineering, Liaocheng University, Liaocheng 252059, China; (D.W.); (M.D.); (P.L.); (J.L.); (H.M.); (X.L.); (M.S.); (Y.G.); (Q.S.); (Q.M.); (X.L.)
| | - Xinxin Liu
- School of Agricultural Science and Engineering, Liaocheng University, Liaocheng 252059, China; (D.W.); (M.D.); (P.L.); (J.L.); (H.M.); (X.L.); (M.S.); (Y.G.); (Q.S.); (Q.M.); (X.L.)
| | - Mengmeng Shi
- School of Agricultural Science and Engineering, Liaocheng University, Liaocheng 252059, China; (D.W.); (M.D.); (P.L.); (J.L.); (H.M.); (X.L.); (M.S.); (Y.G.); (Q.S.); (Q.M.); (X.L.)
| | - Yujie Gong
- School of Agricultural Science and Engineering, Liaocheng University, Liaocheng 252059, China; (D.W.); (M.D.); (P.L.); (J.L.); (H.M.); (X.L.); (M.S.); (Y.G.); (Q.S.); (Q.M.); (X.L.)
| | - Qi Sha
- School of Agricultural Science and Engineering, Liaocheng University, Liaocheng 252059, China; (D.W.); (M.D.); (P.L.); (J.L.); (H.M.); (X.L.); (M.S.); (Y.G.); (Q.S.); (Q.M.); (X.L.)
| | - Qingmei Men
- School of Agricultural Science and Engineering, Liaocheng University, Liaocheng 252059, China; (D.W.); (M.D.); (P.L.); (J.L.); (H.M.); (X.L.); (M.S.); (Y.G.); (Q.S.); (Q.M.); (X.L.)
| | - Xiaofei Li
- School of Agricultural Science and Engineering, Liaocheng University, Liaocheng 252059, China; (D.W.); (M.D.); (P.L.); (J.L.); (H.M.); (X.L.); (M.S.); (Y.G.); (Q.S.); (Q.M.); (X.L.)
| | - Yongwang Sun
- School of Agricultural Science and Engineering, Liaocheng University, Liaocheng 252059, China; (D.W.); (M.D.); (P.L.); (J.L.); (H.M.); (X.L.); (M.S.); (Y.G.); (Q.S.); (Q.M.); (X.L.)
| | - Shangjing Guo
- School of Agricultural Science and Engineering, Liaocheng University, Liaocheng 252059, China; (D.W.); (M.D.); (P.L.); (J.L.); (H.M.); (X.L.); (M.S.); (Y.G.); (Q.S.); (Q.M.); (X.L.)
- College of Life Sciences, Qingdao Agricultural University, Qingdao 266109, China
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Yu P, Li C, Li M, He X, Wang D, Li H, Marcon C, Li Y, Perez-Limón S, Chen X, Delgado-Baquerizo M, Koller R, Metzner R, van Dusschoten D, Pflugfelder D, Borisjuk L, Plutenko I, Mahon A, Resende MFR, Salvi S, Akale A, Abdalla M, Ahmed MA, Bauer FM, Schnepf A, Lobet G, Heymans A, Suresh K, Schreiber L, McLaughlin CM, Li C, Mayer M, Schön CC, Bernau V, von Wirén N, Sawers RJH, Wang T, Hochholdinger F. Seedling root system adaptation to water availability during maize domestication and global expansion. Nat Genet 2024; 56:1245-1256. [PMID: 38778242 DOI: 10.1038/s41588-024-01761-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2023] [Accepted: 04/19/2024] [Indexed: 05/25/2024]
Abstract
The maize root system has been reshaped by indirect selection during global adaptation to new agricultural environments. In this study, we characterized the root systems of more than 9,000 global maize accessions and its wild relatives, defining the geographical signature and genomic basis of variation in seminal root number. We demonstrate that seminal root number has increased during maize domestication followed by a decrease in response to limited water availability in locally adapted varieties. By combining environmental and phenotypic association analyses with linkage mapping, we identified genes linking environmental variation and seminal root number. Functional characterization of the transcription factor ZmHb77 and in silico root modeling provides evidence that reshaping root system architecture by reducing the number of seminal roots and promoting lateral root density is beneficial for the resilience of maize seedlings to drought.
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Affiliation(s)
- Peng Yu
- Crop Functional Genomics, Institute of Crop Science and Resource Conservation (INRES), University of Bonn, Bonn, Germany.
- Emmy Noether Group Root Functional Biology, Institute of Crop Science and Resource Conservation (INRES), University of Bonn, Bonn, Germany.
| | - Chunhui Li
- State Key Laboratory of Crop Gene Resources and Breeding, Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, PR China
| | - Meng Li
- Department of Plant Science, The Pennsylvania State University, State College, PA, USA
| | - Xiaoming He
- Crop Functional Genomics, Institute of Crop Science and Resource Conservation (INRES), University of Bonn, Bonn, Germany
- Emmy Noether Group Root Functional Biology, Institute of Crop Science and Resource Conservation (INRES), University of Bonn, Bonn, Germany
| | - Danning Wang
- Crop Functional Genomics, Institute of Crop Science and Resource Conservation (INRES), University of Bonn, Bonn, Germany
- Emmy Noether Group Root Functional Biology, Institute of Crop Science and Resource Conservation (INRES), University of Bonn, Bonn, Germany
| | - Hongjie Li
- Crop Functional Genomics, Institute of Crop Science and Resource Conservation (INRES), University of Bonn, Bonn, Germany
- Emmy Noether Group Root Functional Biology, Institute of Crop Science and Resource Conservation (INRES), University of Bonn, Bonn, Germany
| | - Caroline Marcon
- Crop Functional Genomics, Institute of Crop Science and Resource Conservation (INRES), University of Bonn, Bonn, Germany
| | - Yu Li
- State Key Laboratory of Crop Gene Resources and Breeding, Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, PR China
| | - Sergio Perez-Limón
- Department of Plant Science, The Pennsylvania State University, State College, PA, USA
| | - Xinping Chen
- College of Resources and Environment, and Academy of Agricultural Sciences, Southwest University (SWU), Chongqing, PR China
| | - Manuel Delgado-Baquerizo
- Laboratorio de Biodiversidad y Funcionamiento Ecosistémico. Instituto de Recursos Naturales y Agrobiología de Sevilla (IRNAS), CSIC, Sevilla, Spain
- Unidad Asociada CSIC-UPO (BioFun), Universidad Pablo de Olavide, Sevilla, Spain
| | - Robert Koller
- Institute of Bio- and Geosciences, Plant Sciences (IBG-2), Forschungszentrum Juelich GmbH, Juelich, Germany
| | - Ralf Metzner
- Institute of Bio- and Geosciences, Plant Sciences (IBG-2), Forschungszentrum Juelich GmbH, Juelich, Germany
| | - Dagmar van Dusschoten
- Institute of Bio- and Geosciences, Plant Sciences (IBG-2), Forschungszentrum Juelich GmbH, Juelich, Germany
| | - Daniel Pflugfelder
- Institute of Bio- and Geosciences, Plant Sciences (IBG-2), Forschungszentrum Juelich GmbH, Juelich, Germany
| | - Ljudmilla Borisjuk
- Department of Molecular Genetics, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK), Gatersleben, Germany
| | - Iaroslav Plutenko
- Department of Molecular Genetics, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK), Gatersleben, Germany
| | - Audrey Mahon
- Horticultural Sciences Department, University of Florida, Gainesville, FL, USA
| | - Marcio F R Resende
- Horticultural Sciences Department, University of Florida, Gainesville, FL, USA
| | - Silvio Salvi
- Department of Agricultural and Food Sciences, University of Bologna, Bologna, Italy
| | - Asegidew Akale
- Chair of Root-Soil Interactions, TUM School of Life Sciences, Technical University of Munich, Freising, Germany
| | - Mohanned Abdalla
- Chair of Root-Soil Interactions, TUM School of Life Sciences, Technical University of Munich, Freising, Germany
| | - Mutez Ali Ahmed
- Chair of Root-Soil Interactions, TUM School of Life Sciences, Technical University of Munich, Freising, Germany
| | - Felix Maximilian Bauer
- Institute of Bio- and Geosciences, Agrosphere (IBG-3), Forschungszentrum Jülich GmbH, Jülich, Germany
| | - Andrea Schnepf
- Institute of Bio- and Geosciences, Agrosphere (IBG-3), Forschungszentrum Jülich GmbH, Jülich, Germany
| | - Guillaume Lobet
- Institute of Bio- and Geosciences, Agrosphere (IBG-3), Forschungszentrum Jülich GmbH, Jülich, Germany
- Earth and Life Institute, Université catholique de Louvain, UCLouvain, Belgium
| | - Adrien Heymans
- Earth and Life Institute, Université catholique de Louvain, UCLouvain, Belgium
| | - Kiran Suresh
- Institute of Cellular and Molecular Botany (IZMB), Department of Ecophysiology, University of Bonn, Bonn, Germany
| | - Lukas Schreiber
- Institute of Cellular and Molecular Botany (IZMB), Department of Ecophysiology, University of Bonn, Bonn, Germany
| | - Chloee M McLaughlin
- Intercollege Graduate Degree Program in Plant Biology, The Pennsylvania State University, State College, PA, USA
| | - Chunjian Li
- Key Laboratory of Plant-Soil Interactions, College of Resources and Environmental Sciences, National Academy of Agriculture Green Development, Ministry of Education, China Agricultural University, Beijing, PR China
| | - Manfred Mayer
- Plant Breeding, TUM School of Life Sciences, Technical University of Munich, Freising, Germany
| | - Chris-Carolin Schön
- Plant Breeding, TUM School of Life Sciences, Technical University of Munich, Freising, Germany
| | - Vivian Bernau
- North Central Regional Plant Introduction Station, USDA-Agriculture Research Service and Iowa State University, Ames, IA, USA
| | - Nicolaus von Wirén
- Department of Physiology and Cell Biology, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK), Gatersleben, Germany
| | - Ruairidh J H Sawers
- Department of Plant Science, The Pennsylvania State University, State College, PA, USA.
| | - Tianyu Wang
- State Key Laboratory of Crop Gene Resources and Breeding, Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, PR China.
| | - Frank Hochholdinger
- Crop Functional Genomics, Institute of Crop Science and Resource Conservation (INRES), University of Bonn, Bonn, Germany.
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Al-Mamun MH, Cazzonelli CI, Krishna P. BZR1 and BES1 transcription factors mediate brassinosteroid control over root system architecture in response to nitrogen availability. FRONTIERS IN PLANT SCIENCE 2024; 15:1387321. [PMID: 38779077 PMCID: PMC11109456 DOI: 10.3389/fpls.2024.1387321] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/17/2024] [Accepted: 04/17/2024] [Indexed: 05/25/2024]
Abstract
Plants modify their root system architecture (RSA) in response to nitrogen (N) deficiency. The plant steroidal hormone, brassinosteroid (BR), plays important roles in root growth and development. This study demonstrates that optimal levels of exogenous BR impact significant increases in lateral root length and numbers in Arabidopsis seedlings under mild N-deficient conditions as compared to untreated seedlings. The impact of BR on RSA was stronger under mild N deficiency than under N-sufficient conditions. The BR effects on RSA were mimicked in dominant mutants of BZR1 and BES1 (bzr1-1D and bes1-D) transcription factors, while the RSA was highly reduced in the BR-insensitive mutant bri1-6, confirming that BR signaling is essential for the development of RSA under both N-sufficient and N-deficient conditions. Exogenous BR and constitutive activity of BZR1 and BES1 in dominant mutants led to enhanced root meristem, meristematic cell number, and cortical cell length. Under mild N deficiency, bzr1-1D displayed higher fresh and dry shoot weights, chlorophyll content, and N levels in the shoot, as compared to the wild type. These results indicate that BR modulates RSA under both N-sufficient and N-deficient conditions via the transcription factors BES1/BZR1 module and confers tolerance to N deficiency.
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Affiliation(s)
| | | | - Priti Krishna
- School of Science, Western Sydney University, Richmond, NSW, Australia
- Faculty of Life Sciences, Graphic Era Deemed to be University, Dehradun, Uttarakhand, India
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Wang J, Liao E, Ren Z, Wang Q, Xu Z, Wu S, Yu C, Yin Y. Extraction and In Vitro Skincare Effect Assessment of Polysaccharides Extract from the Roots of Abelmoschus manihot (L.). Molecules 2024; 29:2109. [PMID: 38731598 PMCID: PMC11085328 DOI: 10.3390/molecules29092109] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/13/2024] [Revised: 04/28/2024] [Accepted: 04/28/2024] [Indexed: 05/13/2024] Open
Abstract
Obtaining high-added value compounds from agricultural waste receives increasing attention, as it can both improve resource utilization efficiency and reduce waste generation. In this study, polysaccharides are extracted from the discarded roots of Abelmoschus manihot (L.) by the high-efficiency ultrasound-assisted extraction (UAE). The optimized condition was determined as solid-liquid ratio SL ratio = 1:20, temperature T = 30 °C and time T = 40 min, achieving an extraction yield of 13.41%. Composition analysis revealed that glucose (Glc, 44.65%), rhamnose (Rha, 26.30%), galacturonic acid (GalA, 12.50%) and galactose (Gal, 9.86%) are the major monosaccharides of the extract. The extract showed a low degree of esterification (DE) value of 40.95%, and its Fourier-transform infrared (FT-IR) spectrum exhibited several characteristic peaks of polysaccharides. Inspired by the wide cosmetic applications of polysaccharides, the skincare effect of the extract was evaluated via the moisture retention, total phenolic content (TPC) quantification, 2,2-Diphenyl-1-picrylhydrazyl (DPPH)-free radical scavenging activity, anti-hyaluronidase and anti-elastase activity experiments. The extract solutions demonstrated a 48 h moisture retention rate of 10.75%, which is superior to that of commercially available moisturizer hyaluronic acid (HA). Moreover, both the TPC value of 16.16 mg GAE/g (dw) and DPPH-free radical scavenging activity of 89.20% at the concentration of 2 mg/mL indicated the strong anti-oxidant properties of the extract. Furthermore, the anti-hyaluronidase activity and moderate anti-elastase activity were determined as 72.16% and 42.02%, respectively. In general, in vitro skincare effect experiments suggest moisturizing, anti-oxidant, anti-radical and anti-aging activities of the A. manihot root extract, indicating its potential applications in the cosmetic industry.
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Affiliation(s)
- Junjie Wang
- Jiangsu Key Laboratory for the Research and Utilization of Plant Resources, Institute of Botany, Jiangsu Province and Chinese Academy of Sciences (Nanjing Botanical Garden Mem. Sun Yat-Sen), Nanjing 210014, China; (J.W.); (E.L.); (Z.R.); (Z.X.); (C.Y.)
- College of Light Industry and Food Engineering, Nanjing Forestry University, Nanjing 210037, China;
| | - Enhui Liao
- Jiangsu Key Laboratory for the Research and Utilization of Plant Resources, Institute of Botany, Jiangsu Province and Chinese Academy of Sciences (Nanjing Botanical Garden Mem. Sun Yat-Sen), Nanjing 210014, China; (J.W.); (E.L.); (Z.R.); (Z.X.); (C.Y.)
| | - Zixuan Ren
- Jiangsu Key Laboratory for the Research and Utilization of Plant Resources, Institute of Botany, Jiangsu Province and Chinese Academy of Sciences (Nanjing Botanical Garden Mem. Sun Yat-Sen), Nanjing 210014, China; (J.W.); (E.L.); (Z.R.); (Z.X.); (C.Y.)
| | - Qiong Wang
- Jiangsu Key Laboratory for the Research and Utilization of Plant Resources, Institute of Botany, Jiangsu Province and Chinese Academy of Sciences (Nanjing Botanical Garden Mem. Sun Yat-Sen), Nanjing 210014, China; (J.W.); (E.L.); (Z.R.); (Z.X.); (C.Y.)
| | - Zenglai Xu
- Jiangsu Key Laboratory for the Research and Utilization of Plant Resources, Institute of Botany, Jiangsu Province and Chinese Academy of Sciences (Nanjing Botanical Garden Mem. Sun Yat-Sen), Nanjing 210014, China; (J.W.); (E.L.); (Z.R.); (Z.X.); (C.Y.)
| | - Shufang Wu
- College of Light Industry and Food Engineering, Nanjing Forestry University, Nanjing 210037, China;
| | - Chaoguang Yu
- Jiangsu Key Laboratory for the Research and Utilization of Plant Resources, Institute of Botany, Jiangsu Province and Chinese Academy of Sciences (Nanjing Botanical Garden Mem. Sun Yat-Sen), Nanjing 210014, China; (J.W.); (E.L.); (Z.R.); (Z.X.); (C.Y.)
| | - Yunlong Yin
- Jiangsu Key Laboratory for the Research and Utilization of Plant Resources, Institute of Botany, Jiangsu Province and Chinese Academy of Sciences (Nanjing Botanical Garden Mem. Sun Yat-Sen), Nanjing 210014, China; (J.W.); (E.L.); (Z.R.); (Z.X.); (C.Y.)
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Singh K, Gupta S, Singh AP. Review: Nutrient-nutrient interactions governing underground plant adaptation strategies in a heterogeneous environment. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2024; 342:112024. [PMID: 38325661 DOI: 10.1016/j.plantsci.2024.112024] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/16/2023] [Revised: 12/20/2023] [Accepted: 02/01/2024] [Indexed: 02/09/2024]
Abstract
Plant growth relies on the mineral nutrients present in the rhizosphere. The distribution of nutrients in soils varies depending on their mobility and capacity to bind with soil particles. Consequently, plants often encounter either low or high levels of nutrients in the rhizosphere. Plant roots are the essential organs that sense changes in soil mineral content, leading to the activation of signaling pathways associated with the adjustment of plant architecture and metabolic responses. During differential availability of minerals in the rhizosphere, plants trigger adaptation strategies such as cellular remobilization of minerals, secretion of organic molecules, and the attenuation or enhancement of root growth to balance nutrient uptake. The interdependency, availability, and uptake of minerals, such as phosphorus (P), iron (Fe), zinc (Zn), potassium (K), nitrogen (N) forms, nitrate (NO3-), and ammonium (NH4+), modulate the root architecture and metabolic functioning of plants. Here, we summarized the interactions of major nutrients (N, P, K, Fe, Zn) in shaping root architecture, physiological responses, genetic components involved, and address the current challenges associated with nutrient-nutrient interactions. Furthermore, we discuss the major gaps and opportunities in the field for developing plants with improved nutrient uptake and use efficiency for sustainable agriculture.
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Affiliation(s)
- Kratika Singh
- National Institute of Plant Genome Research, Aruna Asaf Ali Marg, New Delhi, India
| | - Shreya Gupta
- National Institute of Plant Genome Research, Aruna Asaf Ali Marg, New Delhi, India
| | - Amar Pal Singh
- National Institute of Plant Genome Research, Aruna Asaf Ali Marg, New Delhi, India.
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8
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Li D, Wang J, Chen R, Chen J, Zong J, Li L, Hao D, Guo H. Review: Nitrogen acquisition, assimilation, and seasonal cycling in perennial grasses. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2024; 342:112054. [PMID: 38423392 DOI: 10.1016/j.plantsci.2024.112054] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/06/2023] [Revised: 01/19/2024] [Accepted: 02/26/2024] [Indexed: 03/02/2024]
Abstract
Perennial grasses seasonal nitrogen (N) cycle extends the residence and reuse time of N within the plant system, thereby enhancing N use efficiency. Currently, the mechanism of N metabolism has been extensively examined in model plants and annual grasses, and although perennial grasses exhibit similarities, they also possess distinct characteristics. Apart from assimilating and utilizing N throughout the growing season, perennial grasses also translocate N from aerial parts to perennial tissues, such as rhizomes, after autumn senescence. Subsequently, they remobilize the N from these perennial tissues to support new growth in the subsequent year, thereby ensuring their persistence. Previous studies indicate that the seasonal storage and remobilization of N in perennial grasses are not significantly associated with winter survival despite some amino acids and proteins associated with low temperature tolerance accumulating, but primarily with regrowth during the subsequent spring green-up stage. Further investigation can be conducted in perennial grasses to explore the correlation between stored N and dormant bud outgrowth in perennial tissues, such as rhizomes, during the spring green-up stage, building upon previous research on the relationship between N and axillary bud outgrowth in annual grasses. This exploration on seasonal N cycling in perennial grasses can offer valuable theoretical insights for new perennial grasses varieties with high N use efficiency through the application of gene editing and other advanced technologies.
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Affiliation(s)
- Dandan Li
- The National Forestry and Grassland Administration Engineering Research Center for Germplasm Innovation and Utilization of Warm-Season Turfgrasses, Jiangsu Key Laboratory for the Research and Utilization of Plant Resources, Institute of Botany, Jiangsu Province and Chinese Academy of Sciences (Nanjing Botanical Garden Mem, Sun Yat-Sen), Nanjing, Jiangsu 210014, China
| | - Jingjing Wang
- The National Forestry and Grassland Administration Engineering Research Center for Germplasm Innovation and Utilization of Warm-Season Turfgrasses, Jiangsu Key Laboratory for the Research and Utilization of Plant Resources, Institute of Botany, Jiangsu Province and Chinese Academy of Sciences (Nanjing Botanical Garden Mem, Sun Yat-Sen), Nanjing, Jiangsu 210014, China
| | - Rongrong Chen
- The National Forestry and Grassland Administration Engineering Research Center for Germplasm Innovation and Utilization of Warm-Season Turfgrasses, Jiangsu Key Laboratory for the Research and Utilization of Plant Resources, Institute of Botany, Jiangsu Province and Chinese Academy of Sciences (Nanjing Botanical Garden Mem, Sun Yat-Sen), Nanjing, Jiangsu 210014, China
| | - Jingbo Chen
- The National Forestry and Grassland Administration Engineering Research Center for Germplasm Innovation and Utilization of Warm-Season Turfgrasses, Jiangsu Key Laboratory for the Research and Utilization of Plant Resources, Institute of Botany, Jiangsu Province and Chinese Academy of Sciences (Nanjing Botanical Garden Mem, Sun Yat-Sen), Nanjing, Jiangsu 210014, China
| | - Junqin Zong
- The National Forestry and Grassland Administration Engineering Research Center for Germplasm Innovation and Utilization of Warm-Season Turfgrasses, Jiangsu Key Laboratory for the Research and Utilization of Plant Resources, Institute of Botany, Jiangsu Province and Chinese Academy of Sciences (Nanjing Botanical Garden Mem, Sun Yat-Sen), Nanjing, Jiangsu 210014, China
| | - Ling Li
- The National Forestry and Grassland Administration Engineering Research Center for Germplasm Innovation and Utilization of Warm-Season Turfgrasses, Jiangsu Key Laboratory for the Research and Utilization of Plant Resources, Institute of Botany, Jiangsu Province and Chinese Academy of Sciences (Nanjing Botanical Garden Mem, Sun Yat-Sen), Nanjing, Jiangsu 210014, China
| | - Dongli Hao
- The National Forestry and Grassland Administration Engineering Research Center for Germplasm Innovation and Utilization of Warm-Season Turfgrasses, Jiangsu Key Laboratory for the Research and Utilization of Plant Resources, Institute of Botany, Jiangsu Province and Chinese Academy of Sciences (Nanjing Botanical Garden Mem, Sun Yat-Sen), Nanjing, Jiangsu 210014, China
| | - Hailin Guo
- The National Forestry and Grassland Administration Engineering Research Center for Germplasm Innovation and Utilization of Warm-Season Turfgrasses, Jiangsu Key Laboratory for the Research and Utilization of Plant Resources, Institute of Botany, Jiangsu Province and Chinese Academy of Sciences (Nanjing Botanical Garden Mem, Sun Yat-Sen), Nanjing, Jiangsu 210014, China.
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9
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Xu Y, Qi S, Wang Y, Jia J. Integration of nitrate and abscisic acid signaling in plants. JOURNAL OF EXPERIMENTAL BOTANY 2024:erae128. [PMID: 38661493 DOI: 10.1093/jxb/erae128] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/20/2023] [Accepted: 03/19/2024] [Indexed: 04/26/2024]
Abstract
To meet the demands of the new Green Revolution and sustainable agriculture, it is important to develop crop varieties with improved yield, nitrogen use efficiency, and stress resistance. Nitrate is the major form of inorganic nitrogen available for plant growth in many well-aerated agricultural soils, and acts as a signaling molecule regulating plant development, growth, and stress responses. Abscisic acid (ABA), an important phytohormone, plays vital roles in integrating extrinsic and intrinsic responses and mediating plant growth and development in response to biotic and abiotic stresses. Therefore, elucidating the interplay between nitrate and ABA can contribute to crop breeding and sustainable agriculture. Here, we review studies that have investigated the interplay between nitrate and ABA in root growth modulation, nitrate and ABA transport processes, seed germination regulation, and drought responses. We also focus on nitrate and ABA interplay in several reported omics analyses with some important nodes in the crosstalk between nitrate and ABA. Through these insights, we proposed some research perspectives that could help to develop crop varieties adapted to a changing environment and to improve crop yield with high nitrogen use efficiency and strong stress resistance.
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Affiliation(s)
- Yiran Xu
- National Key Laboratory of Wheat Improvement, College of Life Sciences, Shandong Agricultural University, Tai'an, Shandong 271018, China
| | - Shengdong Qi
- National Key Laboratory of Wheat Improvement, College of Life Sciences, Shandong Agricultural University, Tai'an, Shandong 271018, China
| | - Yong Wang
- National Key Laboratory of Wheat Improvement, College of Life Sciences, Shandong Agricultural University, Tai'an, Shandong 271018, China
| | - Jingbo Jia
- National Key Laboratory of Wheat Improvement, College of Life Sciences, Shandong Agricultural University, Tai'an, Shandong 271018, China
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10
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Zhu Z, Krall L, Li Z, Xi L, Luo H, Li S, He M, Yang X, Zan H, Gilbert M, Gombos S, Wang T, Neuhäuser B, Jacquot A, Lejay L, Zhang J, Liu J, Schulze WX, Wu XN. Transceptor NRT1.1 and receptor-kinase QSK1 complex controls PM H +-ATPase activity under low nitrate. Curr Biol 2024; 34:1479-1491.e6. [PMID: 38490203 DOI: 10.1016/j.cub.2024.02.066] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/01/2023] [Revised: 01/09/2024] [Accepted: 02/27/2024] [Indexed: 03/17/2024]
Abstract
NRT1.1, a nitrate transceptor, plays an important role in nitrate binding, sensing, and nitrate-dependent lateral root (LR) morphology. However, little is known about NRT1.1-mediated nitrate signaling transduction through plasma membrane (PM)-localized proteins. Through in-depth phosphoproteome profiling using membranes of Arabidopsis roots, we identified receptor kinase QSK1 and plasma membrane H+-ATPase AHA2 as potential downstream components of NRT1.1 signaling in a mild low-nitrate (LN)-dependent manner. QSK1, as a functional kinase and molecular link, physically interacts with NRT1.1 and AHA2 at LN and specifically phosphorylates AHA2 at S899. Importantly, we found that LN, not high nitrate (HN), induces formation of the NRT1.1-QSK1-AHA2 complex in order to repress the proton efflux into the apoplast by increased phosphorylation of AHA2 at S899. Loss of either NRT1.1 or QSK1 thus results in a higher T947/S899 phosphorylation ratio on AHA2, leading to enhanced pump activity and longer LRs under LN. Our results uncover a regulatory mechanism in which NRT1.1, under LN conditions, promotes coreceptor QSK1 phosphorylation and enhances the NRT1.1-QSK1 complex formation to transduce LN sensing to the PM H+-ATPase AHA2, controlling the phosphorylation ratio of activating and inhibitory phosphorylation sites on AHA2. This then results in altered proton pump activity, apoplast acidification, and regulation of NRT1.1-mediated LR growth.
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Affiliation(s)
- Zhe Zhu
- Yunnan Key Laboratory of Cell Metabolism and Diseases, State Key Laboratory of Conservation and Utilization of Bio-Resources in Yunnan, Center for Life Science and School of Life Sciences, Yunnan University, Kunming 650500, China
| | - Leonard Krall
- Yunnan Key Laboratory of Cell Metabolism and Diseases, State Key Laboratory of Conservation and Utilization of Bio-Resources in Yunnan, Center for Life Science and School of Life Sciences, Yunnan University, Kunming 650500, China.
| | - Zhi Li
- Department of Plant Systems Biology, University of Hohenheim, 70599 Stuttgart, Germany
| | - Lin Xi
- Department of Plant Systems Biology, University of Hohenheim, 70599 Stuttgart, Germany
| | - Hongxiu Luo
- Yunnan Key Laboratory of Cell Metabolism and Diseases, State Key Laboratory of Conservation and Utilization of Bio-Resources in Yunnan, Center for Life Science and School of Life Sciences, Yunnan University, Kunming 650500, China
| | - Shalan Li
- Yunnan Key Laboratory of Cell Metabolism and Diseases, State Key Laboratory of Conservation and Utilization of Bio-Resources in Yunnan, Center for Life Science and School of Life Sciences, Yunnan University, Kunming 650500, China
| | - Mingjie He
- Department of Plant Systems Biology, University of Hohenheim, 70599 Stuttgart, Germany
| | - Xiaolin Yang
- Yunnan Key Laboratory of Cell Metabolism and Diseases, State Key Laboratory of Conservation and Utilization of Bio-Resources in Yunnan, Center for Life Science and School of Life Sciences, Yunnan University, Kunming 650500, China
| | - Haitao Zan
- Yunnan Key Laboratory of Cell Metabolism and Diseases, State Key Laboratory of Conservation and Utilization of Bio-Resources in Yunnan, Center for Life Science and School of Life Sciences, Yunnan University, Kunming 650500, China
| | - Max Gilbert
- Department of Plant Systems Biology, University of Hohenheim, 70599 Stuttgart, Germany
| | - Sven Gombos
- Department of Plant Systems Biology, University of Hohenheim, 70599 Stuttgart, Germany
| | - Ting Wang
- Key Laboratory of Cell Proliferation and Regulation Biology of Ministry of Education, College of Life Science, Beijing Normal University, Beijing 100875, China
| | - Benjamin Neuhäuser
- Nutritional Crop Physiology, University of Hohenheim, 70599 Stuttgart, Germany
| | - Aurore Jacquot
- IPSiM, University Montpellier, CNRS, INRAE, Institut Agro, 34060 Montpellier, France
| | - Laurence Lejay
- IPSiM, University Montpellier, CNRS, INRAE, Institut Agro, 34060 Montpellier, France
| | - Jingbo Zhang
- National Academy of Agriculture Green Development, College of Resources and Environmental Sciences, China Agricultural University, Beijing 100193, China
| | - Junzhong Liu
- Yunnan Key Laboratory of Cell Metabolism and Diseases, State Key Laboratory of Conservation and Utilization of Bio-Resources in Yunnan, Center for Life Science and School of Life Sciences, Yunnan University, Kunming 650500, China
| | - Waltraud X Schulze
- Department of Plant Systems Biology, University of Hohenheim, 70599 Stuttgart, Germany.
| | - Xu Na Wu
- Yunnan Key Laboratory of Cell Metabolism and Diseases, State Key Laboratory of Conservation and Utilization of Bio-Resources in Yunnan, Center for Life Science and School of Life Sciences, Yunnan University, Kunming 650500, China.
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11
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Zheng L, Hu Y, Yang T, Wang Z, Wang D, Jia L, Xie Y, Luo L, Qi W, Lv Y, Beeckman T, Xuan W, Han Y. A root cap-localized NAC transcription factor controls root halotropic response to salt stress in Arabidopsis. Nat Commun 2024; 15:2061. [PMID: 38448433 PMCID: PMC10917740 DOI: 10.1038/s41467-024-46482-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/21/2023] [Accepted: 02/28/2024] [Indexed: 03/08/2024] Open
Abstract
Plants are capable of altering root growth direction to curtail exposure to a saline environment (termed halotropism). The root cap that surrounds root tip meristematic stem cells plays crucial roles in perceiving and responding to environmental stimuli. However, how the root cap mediates root halotropism remains undetermined. Here, we identified a root cap-localized NAC transcription factor, SOMBRERO (SMB), that is required for root halotropism. Its effect on root halotropism is attributable to the establishment of asymmetric auxin distribution in the lateral root cap (LRC) rather than to the alteration of cellular sodium equilibrium or amyloplast statoliths. Furthermore, SMB is essential for basal expression of the auxin influx carrier gene AUX1 in LRC and for auxin redistribution in a spatiotemporally-regulated manner, thereby leading to directional bending of roots away from higher salinity. Our findings uncover an SMB-AUX1-auxin module linking the role of the root cap to the activation of root halotropism.
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Affiliation(s)
- Lulu Zheng
- Sanya Institute of Nanjing Agricultural University, State Key Laboratory of Crop Genetics & Germplasm Enhancement, College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, China
- Department of Plant Biotechnology and Bioinformatics, Ghent University, Technologiepark 71, Ghent, B-9052, Belgium
- VIB-UGent Center for Plant Systems Biology, Technologiepark 71, Ghent, B-9052, Belgium
| | - Yongfeng Hu
- Key Laboratory of Three Gorges Regional Plant Genetics and Germplasm Enhancement, Biotechnology Research Center, China Three Gorges University, Yichang, China
| | - Tianzhao Yang
- National Engineering Laboratory of Crop Stress Resistence Breeding, School of Life Sciences, Anhui Agricultural University, Hefei, 230036, China
| | - Zhen Wang
- Sanya Institute of Nanjing Agricultural University, State Key Laboratory of Crop Genetics & Germplasm Enhancement, College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, China
| | - Daoyuan Wang
- Sanya Institute of Nanjing Agricultural University, State Key Laboratory of Crop Genetics & Germplasm Enhancement, College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, China
| | - Letian Jia
- Sanya Institute of Nanjing Agricultural University, State Key Laboratory of Crop Genetics & Germplasm Enhancement, College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, China
| | - Yuanming Xie
- Sanya Institute of Nanjing Agricultural University, State Key Laboratory of Crop Genetics & Germplasm Enhancement, College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, China
| | - Long Luo
- National Engineering Laboratory of Crop Stress Resistence Breeding, School of Life Sciences, Anhui Agricultural University, Hefei, 230036, China
| | - Weicong Qi
- Excellence and Innovation Center, Jiangsu Academy of Agricultural Sciences, Nanjing, 210014, China
| | - Yuanda Lv
- Excellence and Innovation Center, Jiangsu Academy of Agricultural Sciences, Nanjing, 210014, China
| | - Tom Beeckman
- Department of Plant Biotechnology and Bioinformatics, Ghent University, Technologiepark 71, Ghent, B-9052, Belgium
- VIB-UGent Center for Plant Systems Biology, Technologiepark 71, Ghent, B-9052, Belgium
| | - Wei Xuan
- Sanya Institute of Nanjing Agricultural University, State Key Laboratory of Crop Genetics & Germplasm Enhancement, College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, China.
| | - Yi Han
- National Engineering Laboratory of Crop Stress Resistence Breeding, School of Life Sciences, Anhui Agricultural University, Hefei, 230036, China.
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12
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Cao H, Liu Z, Guo J, Jia Z, Shi Y, Kang K, Peng W, Wang Z, Chen L, Neuhaeuser B, Wang Y, Liu X, Hao D, Yuan L. ZmNRT1.1B (ZmNPF6.6) determines nitrogen use efficiency via regulation of nitrate transport and signalling in maize. PLANT BIOTECHNOLOGY JOURNAL 2024; 22:316-329. [PMID: 37786281 PMCID: PMC10826987 DOI: 10.1111/pbi.14185] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/01/2023] [Revised: 09/11/2023] [Accepted: 09/15/2023] [Indexed: 10/04/2023]
Abstract
Nitrate (NO3 - ) is crucial for optimal plant growth and development and often limits crop productivity under low availability. In comparison with model plant Arabidopsis, the molecular mechanisms underlying NO3 - acquisition and utilization remain largely unclear in maize. In particular, only a few genes have been exploited to improve nitrogen use efficiency (NUE). Here, we demonstrated that NO3 - -inducible ZmNRT1.1B (ZmNPF6.6) positively regulated NO3 - -dependent growth and NUE in maize. We showed that the tandem duplicated proteoform ZmNRT1.1C is irrelevant to maize seedling growth under NO3 - supply; however, the loss of function of ZmNRT1.1B significantly weakened plant growth under adequate NO3 - supply under both hydroponic and field conditions. The 15 N-labelled NO3 - absorption assay indicated that ZmNRT1.1B mediated the high-affinity NO3 - -transport and root-to-shoot NO3 - translocation. Transcriptome analysis further showed, upon NO3 - supply, ZmNRT1.1B promotes cytoplasmic-to-nuclear shuttling of ZmNLP3.1 (ZmNLP8), which co-regulates the expression of genes involved in NO3 - response, cytokinin biosynthesis and carbon metabolism. Remarkably, overexpression of ZmNRT1.1B in modern maize hybrids improved grain yield under N-limiting fields. Taken together, our study revealed a crucial role of ZmNRT1.1B in high-affinity NO3 - transport and signalling and offers valuable genetic resource for breeding N use efficient high-yield cultivars.
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Affiliation(s)
- Huairong Cao
- State Key Laboratory of Nutrient Use and Management, College of Resources and Environmental Sciences, National Academy of Agriculture Green DevelopmentChina Agricultural UniversityBeijingChina
| | - Zhi Liu
- State Key Laboratory of Nutrient Use and Management, College of Resources and Environmental Sciences, National Academy of Agriculture Green DevelopmentChina Agricultural UniversityBeijingChina
| | - Jia Guo
- Key Laboratory for Agricultural Biotechnology of Jilin ProvincialInstitute of Agricultural Biotechnology, Jilin Academy of Agricultural Sciences (JAAS)JilinChina
| | - Zhongtao Jia
- State Key Laboratory of Nutrient Use and Management, College of Resources and Environmental Sciences, National Academy of Agriculture Green DevelopmentChina Agricultural UniversityBeijingChina
| | - Yandong Shi
- State Key Laboratory of Nutrient Use and Management, College of Resources and Environmental Sciences, National Academy of Agriculture Green DevelopmentChina Agricultural UniversityBeijingChina
| | - Kai Kang
- State Key Laboratory of Nutrient Use and Management, College of Resources and Environmental Sciences, National Academy of Agriculture Green DevelopmentChina Agricultural UniversityBeijingChina
| | - Wushuang Peng
- State Key Laboratory of Nutrient Use and Management, College of Resources and Environmental Sciences, National Academy of Agriculture Green DevelopmentChina Agricultural UniversityBeijingChina
| | - Zhangkui Wang
- State Key Laboratory of Nutrient Use and Management, College of Resources and Environmental Sciences, National Academy of Agriculture Green DevelopmentChina Agricultural UniversityBeijingChina
| | - Limei Chen
- State Key Laboratory of Plant Environmental Resilience, College of Biological Sciences, Center for Crop Functional Genomics and Molecular BreedingChina Agricultural UniversityBeijingChina
| | - Benjamin Neuhaeuser
- Department of Nutritional Crop Physiology, Institute of Crop ScienceUniversity of HohenheimStuttgartGermany
| | - Yong Wang
- National Key Laboratory of Wheat Improvement, College of Life SciencesShandong Agricultural UniversityTai'anShandongChina
| | - Xiangguo Liu
- Key Laboratory for Agricultural Biotechnology of Jilin ProvincialInstitute of Agricultural Biotechnology, Jilin Academy of Agricultural Sciences (JAAS)JilinChina
| | - Dongyun Hao
- Key Laboratory for Agricultural Biotechnology of Jilin ProvincialInstitute of Agricultural Biotechnology, Jilin Academy of Agricultural Sciences (JAAS)JilinChina
| | - Lixing Yuan
- State Key Laboratory of Nutrient Use and Management, College of Resources and Environmental Sciences, National Academy of Agriculture Green DevelopmentChina Agricultural UniversityBeijingChina
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13
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Hu J, Zheng Q, Neuhäuser B, Dong C, Tian Z, Dai T. Superior glucose metabolism supports NH 4+ assimilation in wheat to improve ammonium tolerance. FRONTIERS IN PLANT SCIENCE 2024; 15:1339105. [PMID: 38318495 PMCID: PMC10839024 DOI: 10.3389/fpls.2024.1339105] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/15/2023] [Accepted: 01/05/2024] [Indexed: 02/07/2024]
Abstract
The use of slow-release fertilizers and seed-fertilizers cause localized high-ammonium (NH4 +) environments in agricultural fields, adversely affecting wheat growth and development and delaying its yield. Thus, it is important to investigate the physiological responses of wheat and its tolerance to NH4 + stress to improve the adaptation of wheat to high NH4 + environments. In this study, the physiological mechanisms of ammonium tolerance in wheat (Triticum aestivum) were investigated in depth by comparative analysis of two cultivars: NH4 +-tolerant Xumai25 and NH4 +-sensitive Yangmai20. Cultivation under hydroponic conditions with high NH4 + (5 mM NH4 +, AN) and nitrate (5 mM NO3 -, NN), as control, provided insights into the nuanced responses of both cultivars. Compared to Yangmai20, Xumai25 displayed a comparatively lesser sensitivity to NH4 + stress, as evident by a less pronounced reduction in dry plant biomass and a milder adverse impact on root morphology. Despite similarities in NH4 + efflux and the expression levels of TaAMT1.1 and TaAMT1.2 between the two cultivars, Xumai25 exhibited higher NH4 + influx, while maintaining a lower free NH4 + concentration in the roots. Furthermore, Xumai25 showed a more pronounced increase in the levels of free amino acids, including asparagine, glutamine, and aspartate, suggesting a superior NH4 + assimilation capacity under NH4 + stress compared to Yangmai20. Additionally, the enhanced transcriptional regulation of vacuolar glucose transporter and glucose metabolism under NH4 + stress in Xumai25 contributed to an enhanced carbon skeleton supply, particularly of 2-oxoglutarate and pyruvate. Taken together, our results demonstrate that the NH4 + tolerance of Xumai25 is intricately linked to enhanced glucose metabolism and optimized glucose transport, which contributes to the robust NH4 + assimilation capacity.
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Affiliation(s)
- Jinling Hu
- Key Laboratory of Crop Physiology Ecology and Production Management of Ministry of Agriculture, Nanjing Agricultural University, Nanjing, Jiangsu, China
| | - Qiaomei Zheng
- Key Laboratory of Crop Physiology Ecology and Production Management of Ministry of Agriculture, Nanjing Agricultural University, Nanjing, Jiangsu, China
| | - Benjamin Neuhäuser
- Institute of Crop Science, Nutritional Crop Physiology, University of Hohenheim, Stuttgart, Germany
| | - Chaofeng Dong
- Key Laboratory of Crop Physiology Ecology and Production Management of Ministry of Agriculture, Nanjing Agricultural University, Nanjing, Jiangsu, China
| | - Zhongwei Tian
- Key Laboratory of Crop Physiology Ecology and Production Management of Ministry of Agriculture, Nanjing Agricultural University, Nanjing, Jiangsu, China
| | - Tingbo Dai
- Key Laboratory of Crop Physiology Ecology and Production Management of Ministry of Agriculture, Nanjing Agricultural University, Nanjing, Jiangsu, China
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14
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Taleski M, Jin M, Chapman K, Taylor K, Winning C, Frank M, Imin N, Djordjevic MA. CEP hormones at the nexus of nutrient acquisition and allocation, root development, and plant-microbe interactions. JOURNAL OF EXPERIMENTAL BOTANY 2024; 75:538-552. [PMID: 37946363 PMCID: PMC10773996 DOI: 10.1093/jxb/erad444] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/11/2023] [Accepted: 11/04/2023] [Indexed: 11/12/2023]
Abstract
A growing understanding is emerging of the roles of peptide hormones in local and long-distance signalling that coordinates plant growth and development as well as responses to the environment. C-TERMINALLY ENCODED PEPTIDE (CEP) signalling triggered by its interaction with CEP RECEPTOR 1 (CEPR1) is known to play roles in systemic nitrogen (N) demand signalling, legume nodulation, and root system architecture. Recent research provides further insight into how CEP signalling operates, which involves diverse downstream targets and interactions with other hormone pathways. Additionally, there is emerging evidence of CEP signalling playing roles in N allocation, root responses to carbon levels, the uptake of other soil nutrients such as phosphorus and sulfur, root responses to arbuscular mycorrhizal fungi, plant immunity, and reproductive development. These findings suggest that CEP signalling more broadly coordinates growth across the whole plant in response to diverse environmental cues. Moreover, CEP signalling and function appear to be conserved in angiosperms. We review recent advances in CEP biology with a focus on soil nutrient uptake, root system architecture and organogenesis, and roles in plant-microbe interactions. Furthermore, we address knowledge gaps and future directions in this research field.
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Affiliation(s)
- Michael Taleski
- Division of Plant Sciences, Research School of Biology, College of Science, The Australian National University, Canberra, ACT, 2601Australia
| | - Marvin Jin
- Division of Plant Sciences, Research School of Biology, College of Science, The Australian National University, Canberra, ACT, 2601Australia
| | - Kelly Chapman
- Division of Plant Sciences, Research School of Biology, College of Science, The Australian National University, Canberra, ACT, 2601Australia
| | - Katia Taylor
- CSIRO Agriculture and Food, Canberra, ACT, 2601, Australia
| | - Courtney Winning
- Division of Plant Sciences, Research School of Biology, College of Science, The Australian National University, Canberra, ACT, 2601Australia
| | - Manuel Frank
- Department of Molecular Biology and Genetics, Aarhus University, 8000 Aarhus, Denmark
| | - Nijat Imin
- School of Science, Western Sydney University, Penrith, New South Wales 2751, Australia
| | - Michael A Djordjevic
- Division of Plant Sciences, Research School of Biology, College of Science, The Australian National University, Canberra, ACT, 2601Australia
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15
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Shi C, Wang P, Wang G, Hu T, Ru Z, Feng S. Responses of root characteristics and nitrogen absorption and assimilation to different pH gradients of winter wheat at seedling stage. PLoS One 2023; 18:e0293471. [PMID: 38127853 PMCID: PMC10735037 DOI: 10.1371/journal.pone.0293471] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/01/2023] [Accepted: 10/12/2023] [Indexed: 12/23/2023] Open
Abstract
Nitrogen (N) and rhizosphere pH are the two main factors restricting the growth of winter wheat (Triticum aestivum L.) in North China Plain. Soil nutrient availability is affected by soil acidity and alkalinity. In order to understand the effect of rhizosphere pH value on wheat nitrogen metabolism and the response of wheat growth to pH value at seedling stage, winter wheat varieties 'Aikang 58' (AK58) and 'Bainong 4199' (BN4199) were tested in hydroponics under three pH treatments (pH = 4.0, 6.5, and 9.0). The results showed that the accumulation of dry matter in root and above ground under pH 4.0 and pH 9.0 treatments was lower than that under pH 6.5 treatments, and the root/shoot ratio increased with the increase of pH value. Regardless of pH value, 'BN4199' had higher root dry weight, root length, root surface area, root activity and root tip than 'AK58'. Therefore, wheat that is tolerant to extreme pH is able to adapt to the acid-base environment by changing root characteristics. At pH 4.0, the net H+ outflow rate of wheat roots was significantly lower than that of the control group, and the net NO3- flux of wheat roots was also low. The net H+ outflow occurred at pH 6.5 and 9.0, and at the same time, the net NO3- flux of roots also increased, and both increased with the increase of pH. The activity of nitrate reductase (NR) in stem of pH 9.0 treatment was significantly higher than that of other treatments, while the activity of glutamine synthetase (GS) in root and stem of pH 6.5 treatment was significantly higher than that of other treatments. Under pH 4.0 and pH 9.0 treatments, the activities of NR and GS in 'BN4199' were higher than those in 'AK58', The root respiration of 'BN4199' was significantly higher than that of 'AK58' under pH 4.0 and pH 9.0 treatment, and 'BN4199' had higher NO3- net flux, key enzyme activity of root nitrogen metabolism and root respiration. Therefore, we believe that 'BN4199' has strong resistance ability to extreme pH stress, and high root/shoot ratio and strong root respiration can be used as important indicators for wheat variety screening adapted to the alkaline environment at the seedling stage.
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Affiliation(s)
- Chenchen Shi
- Henan Provincial Key Laboratory of Hybrid Wheat, Henan Institute of Science and Technology / Collaborative Innovation Center of Modern Biological Breeding, Xinxiang, China
| | - Peiyu Wang
- Henan Provincial Key Laboratory of Hybrid Wheat, Henan Institute of Science and Technology / Collaborative Innovation Center of Modern Biological Breeding, Xinxiang, China
| | - Guangtao Wang
- Henan Provincial Key Laboratory of Hybrid Wheat, Henan Institute of Science and Technology / Collaborative Innovation Center of Modern Biological Breeding, Xinxiang, China
| | - Tiezhu Hu
- Henan Provincial Key Laboratory of Hybrid Wheat, Henan Institute of Science and Technology / Collaborative Innovation Center of Modern Biological Breeding, Xinxiang, China
| | - Zhengang Ru
- Henan Provincial Key Laboratory of Hybrid Wheat, Henan Institute of Science and Technology / Collaborative Innovation Center of Modern Biological Breeding, Xinxiang, China
| | - Suwei Feng
- Henan Provincial Key Laboratory of Hybrid Wheat, Henan Institute of Science and Technology / Collaborative Innovation Center of Modern Biological Breeding, Xinxiang, China
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16
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Sexauer M, Bhasin H, Schön M, Roitsch E, Wall C, Herzog U, Markmann K. A micro RNA mediates shoot control of root branching. Nat Commun 2023; 14:8083. [PMID: 38057302 DOI: 10.1038/s41467-023-43738-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/22/2022] [Accepted: 11/18/2023] [Indexed: 12/08/2023] Open
Abstract
Plants extract mineral nutrients from the soil, or from interactions with mutualistic soil microbes via their root systems. Adapting root architecture to nutrient availability enables efficient resource utilization, particularly in patchy and dynamic environments. Root growth responses to soil nitrogen levels are shoot-mediated, but the identity of shoot-derived mobile signals regulating root growth responses has remained enigmatic. Here we show that a shoot-derived micro RNA, miR2111, systemically steers lateral root initiation and nitrogen responsiveness through its root target TML (TOO MUCH LOVE) in the legume Lotus japonicus, where miR2111 and TML were previously shown to regulate symbiotic infections with nitrogen fixing bacteria. Intriguingly, systemic control of lateral root initiation by miR2111 and TML/HOLT (HOMOLOGUE OF LEGUME TML) was conserved in the nonsymbiotic ruderal Arabidopsis thaliana, which follows a distinct ecological strategy. Thus, the miR2111-TML/HOLT regulon emerges as an essential, conserved factor in adaptive shoot control of root architecture in dicots.
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Affiliation(s)
- Moritz Sexauer
- Eberhard-Karls-University, Centre for Molecular Biology of Plants, Tübingen, Germany
- Julius-Maximilians-University, Julius-von-Sachs Institute for Biosciences, Würzburg, Germany
| | - Hemal Bhasin
- Eberhard-Karls-University, Centre for Molecular Biology of Plants, Tübingen, Germany
- University of Toronto - Scarborough, Department of Biological Sciences, Toronto, ON, Canada
| | - Maria Schön
- Eberhard-Karls-University, Centre for Molecular Biology of Plants, Tübingen, Germany
| | - Elena Roitsch
- Eberhard-Karls-University, Centre for Molecular Biology of Plants, Tübingen, Germany
- Martin-Luther-University Halle-Wittenberg, Institute for Genetics, Halle/Saale, Germany
| | - Caroline Wall
- Eberhard-Karls-University, Centre for Molecular Biology of Plants, Tübingen, Germany
| | - Ulrike Herzog
- Eberhard-Karls-University, Centre for Molecular Biology of Plants, Tübingen, Germany
| | - Katharina Markmann
- Eberhard-Karls-University, Centre for Molecular Biology of Plants, Tübingen, Germany.
- Martin-Luther-University Halle-Wittenberg, Institute for Genetics, Halle/Saale, Germany.
- Julius-Maximilians-University, Julius-von-Sachs Institute for Biosciences, Würzburg, Germany.
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17
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Wu J, Yang S, Chen N, Jiang Q, Huang L, Qi J, Xu G, Shen L, Yu H, Fan X, Gan Y. Nuclear translocation of OsMADS25 facilitated by OsNAR2.1 in reponse to nitrate signals promotes rice root growth by targeting OsMADS27 and OsARF7. PLANT COMMUNICATIONS 2023; 4:100642. [PMID: 37353931 PMCID: PMC10721473 DOI: 10.1016/j.xplc.2023.100642] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/28/2022] [Revised: 05/24/2023] [Accepted: 06/20/2023] [Indexed: 06/25/2023]
Abstract
Nitrate is an important nitrogen source and signaling molecule that regulates plant growth and development. Although several components of the nitrate signaling pathway have been identified, the detailed mechanisms are still unclear. Our previous results showed that OsMADS25 can regulate root development in response to nitrate signals, but the mechanism is still unknown. Here, we try to answer two key questions: how does OsMADS25 move from the cytoplasm to the nucleus, and what are the direct target genes activated by OsMADS25 to regulate root growth after it moves to the nucleus in response to nitrate? Our results demonstrated that OsMADS25 moves from the cytoplasm to the nucleus in the presence of nitrate in an OsNAR2.1-dependent manner. Chromatin immunoprecipitation sequencing, chromatin immunoprecipitation qPCR, yeast one-hybrid, and luciferase experiments showed that OsMADS25 directly activates the expression of OsMADS27 and OsARF7, which are reported to be associated with root growth. Finally, OsMADS25-RNAi lines, the Osnar2.1 mutant, and OsMADS25-RNAi Osnar2.1 lines exhibited significantly reduced root growth compared with the wild type in response to nitrate supply, and expression of OsMADS27 and OsARF7 was significantly suppressed in these lines. Collectively, these results reveal a new mechanism by which OsMADS25 interacts with OsNAR2.1. This interaction is required for nuclear accumulation of OsMADS25, which promotes OsMADS27 and OsARF7 expression and root growth in a nitrate-dependent manner.
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Affiliation(s)
- Junyu Wu
- Zhejiang Key Laboratory of Crop Germplasm, Department of Agronomy, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou 310000, China
| | - Shuaiqi Yang
- Zhejiang Key Laboratory of Crop Germplasm, Department of Agronomy, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou 310000, China
| | - Nana Chen
- Zhejiang Key Laboratory of Crop Germplasm, Department of Agronomy, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou 310000, China
| | - Qining Jiang
- Zhejiang Key Laboratory of Crop Germplasm, Department of Agronomy, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou 310000, China
| | - Linli Huang
- Zhejiang Key Laboratory of Crop Germplasm, Department of Agronomy, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou 310000, China
| | - Jiaxuan Qi
- Zhejiang Key Laboratory of Crop Germplasm, Department of Agronomy, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou 310000, China
| | - Guohua Xu
- State Key Laboratory of Crop Genetics and Germplasm Enhancement, Nanjing Agricultural University, Nanjing 210095, China
| | - Lisha Shen
- Temasek Life Sciences Laboratory and Department of Biological Sciences, National University of Singapore, 1 Research Link, Singapore 117604, Singapore
| | - Hao Yu
- Temasek Life Sciences Laboratory and Department of Biological Sciences, National University of Singapore, 1 Research Link, Singapore 117604, Singapore
| | - Xiaorong Fan
- State Key Laboratory of Crop Genetics and Germplasm Enhancement, Nanjing Agricultural University, Nanjing 210095, China.
| | - Yinbo Gan
- Zhejiang Key Laboratory of Crop Germplasm, Department of Agronomy, College of Agriculture and Biotechnology, Zhejiang University, Hangzhou 310000, China.
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18
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Speißer B, van Kleunen M. Plants forage for soil patches free of plastic pollution but cannot bag the profits. Sci Rep 2023; 13:18506. [PMID: 37898611 PMCID: PMC10613303 DOI: 10.1038/s41598-023-45662-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/18/2023] [Accepted: 10/22/2023] [Indexed: 10/30/2023] Open
Abstract
Microplastics can affect their surroundings physically and chemically, resulting in diverse effects on plant-soil systems. Similar to other substances (e.g. nutrients and water), microplastics in the environment occur in patches. Such heterogeneous distributions could affect plant responses to plastic pollution. Yet, this has remained untested. We conducted a multispecies experiment including 29 herbaceous plant species and three different microplastic treatments (a control without microplastics, a homogeneous and a heterogeneous microplastic distribution). Based on biomass and root-morphological traits, we assessed how different plastic distributions affect the performance and root-foraging behavior of plants, and whether stronger root foraging is beneficial when microplastics are distributed patchily. Next to general effects on plant productivity and root morphology, we found very strong evidence for root-foraging responses to patchy plastic distributions, with a clear preference for plastic-free patches, resulting in 25% longer roots and 20% more root biomass in the plastic-free patches. Interestingly, however, these foraging responses were correlated with a reduced plant performance, indicating that the benefits of plastic avoidance did not compensate for the associated investments. Our results provide new insights in plant-microplastic interactions and suggest that plants might not just be passively affected by but could also actively respond to environmental plastic pollution.
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Affiliation(s)
- Benedikt Speißer
- Ecology, Department of Biology, University of Konstanz, 78464, Constance, Germany.
| | - Mark van Kleunen
- Ecology, Department of Biology, University of Konstanz, 78464, Constance, Germany
- Zhejiang Provincial Key Laboratory of Plant Evolutionary Ecology and Conservation, Taizhou University, Taizhou, 318000, China
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19
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Zhang L, Braynen J, Fahey A, Chopra K, Cifani P, Tadesse D, Regulski M, Hu F, van Dam HJJ, Xie M, Ware D, Blaby-Haas CE. Two related families of metal transferases, ZNG1 and ZNG2, are involved in acclimation to poor Zn nutrition in Arabidopsis. FRONTIERS IN PLANT SCIENCE 2023; 14:1237722. [PMID: 37965006 PMCID: PMC10642216 DOI: 10.3389/fpls.2023.1237722] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/09/2023] [Accepted: 10/02/2023] [Indexed: 11/16/2023]
Abstract
Metal homeostasis has evolved to tightly modulate the availability of metals within the cell, avoiding cytotoxic interactions due to excess and protein inactivity due to deficiency. Even in the presence of homeostatic processes, however, low bioavailability of these essential metal nutrients in soils can negatively impact crop health and yield. While research has largely focused on how plants assimilate metals, acclimation to metal-limited environments requires a suite of strategies that are not necessarily involved in metal transport across membranes. The identification of these mechanisms provides a new opportunity to improve metal-use efficiency and develop plant foodstuffs with increased concentrations of bioavailable metal nutrients. Here, we investigate the function of two distinct subfamilies of the nucleotide-dependent metallochaperones (NMCs), named ZNG1 and ZNG2, that are found in plants, using Arabidopsis thaliana as a reference organism. AtZNG1 (AT1G26520) is an ortholog of human and fungal ZNG1, and like its previously characterized eukaryotic relatives, localizes to the cytosol and physically interacts with methionine aminopeptidase type I (AtMAP1A). Analysis of AtZNG1, AtMAP1A, AtMAP2A, and AtMAP2B transgenic mutants are consistent with the role of Arabidopsis ZNG1 as a Zn transferase for AtMAP1A, as previously described in yeast and zebrafish. Structural modeling reveals a flexible cysteine-rich loop that we hypothesize enables direct transfer of Zn from AtZNG1 to AtMAP1A during GTP hydrolysis. Based on proteomics and transcriptomics, loss of this ancient and conserved mechanism has pleiotropic consequences impacting the expression of hundreds of genes, including those involved in photosynthesis and vesicle transport. Members of the plant-specific family of NMCs, ZNG2A1 (AT1G80480) and ZNG2A2 (AT1G15730), are also required during Zn deficiency, but their target protein(s) remain to be discovered. RNA-seq analyses reveal wide-ranging impacts across the cell when the genes encoding these plastid-localized NMCs are disrupted.
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Affiliation(s)
- Lifang Zhang
- Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, United States
| | - Janeen Braynen
- Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, United States
| | - Audrey Fahey
- Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, United States
| | - Kriti Chopra
- Computational Science Initiative, Brookhaven National Laboratory, Upton, NY, United States
| | - Paolo Cifani
- Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, United States
| | - Dimiru Tadesse
- Biology Department, Brookhaven National Laboratory, Upton, NY, United States
| | - Michael Regulski
- Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, United States
| | - Fangle Hu
- Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, United States
| | - Hubertus J. J. van Dam
- Condensed Matter Physics and Materials Science Department, Brookhaven National Laboratory, Upton, NY, United States
| | - Meng Xie
- Biology Department, Brookhaven National Laboratory, Upton, NY, United States
| | - Doreen Ware
- Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, United States
- USDA ARS NAA Robert W. Holley Center for Agriculture and Health, Agricultural Research Service, Ithaca, NY, United States
| | - Crysten E. Blaby-Haas
- Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, United States
- Molecular Foundry, Lawrence Berkeley National Laboratory, Berkeley, CA, United States
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20
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Yan K, Mei H, Ruan Y, Yu S, Su H, Zhi Y, Li S, Sun Y. Partial substitution of chemical fertilizer by Trichoderma biofertilizer improved nitrogen use efficiency in wolfberry ( Lycium chinense) in coastal saline land. FRONTIERS IN PLANT SCIENCE 2023; 14:1225028. [PMID: 37877079 PMCID: PMC10591101 DOI: 10.3389/fpls.2023.1225028] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/18/2023] [Accepted: 09/22/2023] [Indexed: 10/26/2023]
Abstract
A two-year field trial was conducted to investigate the effects of partial substitution of chemical fertilizer (CF) by Trichoderma biofertilizer (TF) on nitrogen (N) use efficiency and associated mechanisms in wolfberry (Lycium chinense) in coastal saline land. As with plant biomass and fruit yield, apparent N use efficiency and plant N accumulation were also higher with TF plus 75% CF than 100% CF, indicating that TF substitution promoted plant growth and N uptake. As a reason, TF substitution stabilized soil N supply by mitigating steep deceases in soil NH4 +-N and NO3 -N concentrations in the second half of growing seasons. TF substitution also increased carbon (C) fixation according to higher photosynthetic rate (Pn) and stable 13C abundance with TF plus 75% CF than 100% CF. Importantly, leaf N accumulation significantly and positively related with Pn, biomass, and fruit yield, and structural equation modeling also confirmed the importance of the causal relation of N accumulation coupled with C fixation for biomass and yield formation. Consequently, physiological and agronomical N use efficiencies were significantly higher with TF plus 75% CF than 100% CF. Overall, partial substitution of CF by TF improved N use efficiency in wolfberry in coastal saline land by stabilizing soil N supply and coupling N accumulation with C fixation.
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Affiliation(s)
- Kun Yan
- School of Agriculture, Ludong University, Yantai, China
| | - Huimin Mei
- School of Life Sciences, Liaoning University, Shenyang, China
| | - Yanan Ruan
- School of Life Sciences, Liaoning University, Shenyang, China
| | - Shunyang Yu
- CAS Key Laboratory of Coastal Environmental Processes and Ecological Remediation, Yantai Institute of Coastal Zone Research, Chinese Academy of Sciences (CAS), Yantai, China
| | - Hongyan Su
- School of Agriculture, Ludong University, Yantai, China
| | - Yibo Zhi
- School of Agriculture, Ludong University, Yantai, China
| | - Suxin Li
- School of Agriculture, Ludong University, Yantai, China
| | - Yanan Sun
- School of Agriculture, Ludong University, Yantai, China
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21
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Marti-Jerez K, Català-Forner M, Tomàs N, Murillo G, Ortiz C, Sánchez-Torres MJ, Vitali A, Lopes MS. Agronomic performance and remote sensing assessment of organic and mineral fertilization in rice fields. FRONTIERS IN PLANT SCIENCE 2023; 14:1230012. [PMID: 37860263 PMCID: PMC10582757 DOI: 10.3389/fpls.2023.1230012] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/30/2023] [Accepted: 09/15/2023] [Indexed: 10/21/2023]
Abstract
Introduction Rice heavily relies on nitrogen fertilizers, posing environmental, resource, and geopolitical challenges. This study explores sustainable alternatives like animal manure and remote sensing for resource-efficient rice cultivation. It aims to assess the long-term impact of organic fertilization and remote sensing monitoring on agronomic traits, yield, and nutrition. Methods A six-year experiment in rice fields evaluated fertilization strategies, including pig slurry (PS) and chicken manure (CM) with mineral fertilizers (MIN), MIN-only, and zero-fertilization. Traits, yield, spectral responses, and nutrient content were measured. Sentinel-2 remote sensing tracked crop development. Results Cost-effective organic fertilizers (PS and CM) caused a 13% and 15% yield reduction but still doubled zero-fertilization yield. PS reduced nitrogen leaching. Heavy metals in rice grains were present at safe amounts. Organic-fertilized crops showed nitrogen deficiency at the late vegetative stages, affecting yield. Sentinel-2 detected nutrient deficiencies through NDVI. Discussion Organic fertilizers, especially PS, reduce nitrogen loss, benefiting the environment. However, they come with yield trade-offs and nutrient management challenges that can be managed and balanced with reduced additional mineral applications. Sentinel-2 remote sensing helps manage nutrient deficiencies. In summary, this research favors cost-effective organic fertilizers with improved nutrient management for sustainable rice production.
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Affiliation(s)
- Karen Marti-Jerez
- Sustainable Field Crops, Institute of Agrifood Research and Technology, Amposta, Spain
| | - Mar Català-Forner
- Sustainable Field Crops, Institute of Agrifood Research and Technology, Amposta, Spain
| | - Núria Tomàs
- Sustainable Field Crops, Institute of Agrifood Research and Technology, Amposta, Spain
| | - Gemma Murillo
- Ministry of Climate Action, Food and Rural Agenda, Lleida, Spain
| | - Carlos Ortiz
- Ministry of Climate Action, Food and Rural Agenda, Lleida, Spain
| | | | - Andrea Vitali
- Ente Nazionale Risi, Rice Research Centre, Castello d’Agogna, Italy
| | - Marta S. Lopes
- Sustainable Field Crops, Institute of Agrifood Research and Technology, Lleida, Spain
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22
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Wang HQ, Zhao XY, Xuan W, Wang P, Zhao FJ. Rice roots avoid asymmetric heavy metal and salinity stress via an RBOH-ROS-auxin signaling cascade. MOLECULAR PLANT 2023; 16:1678-1694. [PMID: 37735869 DOI: 10.1016/j.molp.2023.09.007] [Citation(s) in RCA: 10] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/19/2023] [Revised: 08/14/2023] [Accepted: 09/14/2023] [Indexed: 09/23/2023]
Abstract
Root developmental plasticity is crucial for plants to adapt to a changing soil environment, where nutrients and abiotic stress factors are distributed heterogeneously. How plant roots sense and avoid heterogeneous abiotic stress in soil remains unclear. Here, we show that, in response to asymmetric stress of heavy metals (cadmium, copper, or lead) and salt, rice roots rapidly proliferate lateral roots (LRs) in the stress-free area, thereby remodeling root architecture to avoid localized stress. Imaging and quantitative analyses of reactive oxygen species (ROS) showed that asymmetric stress induces a ROS burst in the tips of the exposed roots and simultaneously triggers rapid systemic ROS signaling to the unexposed roots. Addition of a ROS scavenger to either the stressed or stress-free area abolished systemic ROS signaling and LR proliferation induced by asymmetric stress. Asymmetric stress also enhanced cytosolic calcium (Ca2+) signaling; blocking Ca2+signaling inhibited systemic ROS propagation and LR branching in the stress-free area. We identified two plasma-membrane-localized respiratory burst oxidase homologs, OsRBOHA and OsRBOHI, as key players in systemic ROS signaling under asymmetric stress. Expression of OsRBOHA and OsRBOHI in roots was upregulated by Cd stress, and knockout of either gene reduced systemic ROS signaling and LR proliferation under asymmetric stress. Furthermore, we demonstrated that auxin signaling and cell wall remodeling act downstream of the systemic ROS signaling to promote LR development. Collectively, our study reveals an RBOH-ROS-auxin signaling cascade that enables rice roots to avoid localized stress of heavy metals and salt and provides new insight into root system plasticity in heterogenous soil.
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Affiliation(s)
- Han-Qing Wang
- State Key Laboratory of Crop Genetics & Germplasm Enhancement and Utilization, College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing 210095, China
| | - Xing-Yu Zhao
- State Key Laboratory of Crop Genetics & Germplasm Enhancement and Utilization, College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing 210095, China
| | - Wei Xuan
- State Key Laboratory of Crop Genetics & Germplasm Enhancement and Utilization, College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing 210095, China
| | - Peng Wang
- State Key Laboratory of Crop Genetics & Germplasm Enhancement and Utilization, College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing 210095, China
| | - Fang-Jie Zhao
- State Key Laboratory of Crop Genetics & Germplasm Enhancement and Utilization, College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing 210095, China.
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23
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Jia Z, Giehl RFH, Hartmann A, Estevez JM, Bennett MJ, von Wirén N. A spatially concerted epidermal auxin signaling framework steers the root hair foraging response under low nitrogen. Curr Biol 2023; 33:3926-3941.e5. [PMID: 37699396 DOI: 10.1016/j.cub.2023.08.040] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/13/2023] [Revised: 05/08/2023] [Accepted: 08/14/2023] [Indexed: 09/14/2023]
Abstract
As a major determinant of the nutrient-acquiring root surface, root hairs (RHs) provide a low-input strategy to enhance nutrient uptake. Although primary and lateral roots exhibit elongation responses under mild nitrogen (N) deficiency, the foraging response of RHs and underlying regulatory mechanisms remain elusive. Employing transcriptomics and functional studies revealed a framework of molecular components composing a cascade of auxin synthesis, transport, and signaling that triggers RH elongation for N acquisition. Through upregulation of Tryptophan Aminotransferase of Arabidopsis 1 (TAA1) and YUCCA8, low N increases auxin accumulation in the root apex. Auxin is then directed to the RH differentiation zone via the auxin transport machinery, AUXIN TRANSPORTER PROTEIN 1 (AUX1) and PIN-FORMED 2 (PIN2). Upon arrival to the RH zone, auxin activates the transcription factors AUXIN RESPONSE FACTOR 6 and 8 (ARF6/8) to promote the epidermal and auxin-inducible transcriptional module ROOT HAIR DEFECTIVE 6 (RHD6)-LOTUS JAPONICA ROOT HAIRLESS-LIKE 3 (LRL3) to steer RH elongation in response to low N. Our study uncovers a spatially defined regulatory signaling cascade for N foraging by RHs, expanding the mechanistic framework of hormone-regulated nutrient sensing in plant roots.
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Affiliation(s)
- Zhongtao Jia
- Molecular Plant Nutrition, Department of Physiology & Cell Biology, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK), Corrensstr. 3, 06466 Gatersleben, Germany; State Key Laboratory of Nutrient Use and Management, College of Resources and Environmental Sciences, China Agricultural University, Beijing 100193, China.
| | - Ricardo F H Giehl
- Molecular Plant Nutrition, Department of Physiology & Cell Biology, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK), Corrensstr. 3, 06466 Gatersleben, Germany
| | - Anja Hartmann
- Molecular Plant Nutrition, Department of Physiology & Cell Biology, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK), Corrensstr. 3, 06466 Gatersleben, Germany
| | - Jose M Estevez
- ANID - Millennium Science Initiative Program - Millennium Nucleus for the Development of Super Adaptable Plants (MN-SAP), Santiago, Chile; Centro de Biotecnología Vegetal, Facultad de Ciencias de la Vida, Universidad Andres Bello, Santiago, Chile
| | - Malcolm J Bennett
- Future Food Beacon and School of Biosciences, University of Nottingham, Nottingham LE12 5RD, UK
| | - Nicolaus von Wirén
- Molecular Plant Nutrition, Department of Physiology & Cell Biology, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK), Corrensstr. 3, 06466 Gatersleben, Germany.
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24
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Zhang C, Zhang C, Azuma T, Maruyama H, Shinano T, Watanabe T. Different nitrogen acquirement and utilization strategies might determine the ecological competition between ferns and angiosperms. ANNALS OF BOTANY 2023; 131:1097-1106. [PMID: 36661261 PMCID: PMC10457029 DOI: 10.1093/aob/mcad009] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/18/2022] [Accepted: 01/11/2023] [Indexed: 06/17/2023]
Abstract
BACKGROUND AND AIMS The abundance or decline of fern populations in response to environmental change has been found to be largely dependent on specific physiological properties that distinguish ferns from angiosperms. Many studies have focused on water use efficiency and stomatal behaviours, but the effects of nutrition acquirement and utilization strategies on niche competition between ferns and flowering plants are rarely reported. METHODS We collected 34 ferns and 42 angiosperms from the Botanic Garden of Hokkaido University for nitrogen (N), sulphur (S), NO3- and SO42- analysis. We then used a hydroponic system to compare the different N and S utilization strategies between ferns and angiosperms under N deficiency conditions. KEY RESULTS Ferns had a significantly higher NO3--N concentration and NO3--N/N ratio than angiosperms, although the total N concentration in ferns was remarkably lower than that in the angiosperms. Meanwhile, a positive correlation between N and S was found, indicating that nutrient concentration is involved in assimilation. Pteris cretica, a fern species subjected to further study, maintained a slow growth rate and lower N requirement in response to low N stress, while both the biomass and N concentration in wheat (Triticum aestivum) responded quickly to N deficiency conditions. CONCLUSIONS The different nutritional strategies employed by ferns and angiosperms depended mainly on the effects of phylogenetic and evolutionary diversity. Ferns tend to adopt an opportunistic strategy of limiting growth rate to reduce N demand and store more pooled nitrate, whereas angiosperms probably utilize N nutrition to ensure as much development as possible under low N stress. Identifying the effects of mineral nutrition on the evolutionary results of ecological competition between plant species remains a challenge.
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Affiliation(s)
- Chengming Zhang
- College of Chemistry and Life Sciences, Sichuan Provincial Key Laboratory for Development and Utilization of Characteristic Horticultural Biological Resources, Chengdu Normal University, Haike Road-99 East Section, Chengdu, 611130, China
- Research Faculty of Agriculture, Hokkaido University, Kita-9, Nishi-9, Kitaku, Sapporo, 0608589, Japan
| | - Chaoqun Zhang
- Research Faculty of Agriculture, Hokkaido University, Kita-9, Nishi-9, Kitaku, Sapporo, 0608589, Japan
| | - Takayuki Azuma
- Field Science Center for Northern Biosphere, Botanic Garden, Hokkaido University, Kita-3, Nishi-8, Chuoku, Sapporo, 0600003, Japan
| | - Hayato Maruyama
- Research Faculty of Agriculture, Hokkaido University, Kita-9, Nishi-9, Kitaku, Sapporo, 0608589, Japan
| | - Takuro Shinano
- Research Faculty of Agriculture, Hokkaido University, Kita-9, Nishi-9, Kitaku, Sapporo, 0608589, Japan
| | - Toshihiro Watanabe
- Research Faculty of Agriculture, Hokkaido University, Kita-9, Nishi-9, Kitaku, Sapporo, 0608589, Japan
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25
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Liu L, Cui K, Qi X, Wu Y, Huang J, Peng S. Varietal responses of root characteristics to low nitrogen application explain the differing nitrogen uptake and grain yield in two rice varieties. FRONTIERS IN PLANT SCIENCE 2023; 14:1244281. [PMID: 37600168 PMCID: PMC10435752 DOI: 10.3389/fpls.2023.1244281] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/22/2023] [Accepted: 07/18/2023] [Indexed: 08/22/2023]
Abstract
Rice root characteristics are tightly associated with high-efficient nitrogen uptake. To understand the relationship of root plastic responses with nitrogen uptake when reducing nitrogen application for green rice production, a hydroponic experiment and a soil pot experiment were conducted under high (HN) and low (LN) nitrogen applications, using two rice (Oryza sativa L.) varieties, NK57 and YD6, three nitrogen absorption traits (total nitrogen accumulation, net NH4 + influx on root surface, nitrogen uptake via apoplasmic pathway) and root characteristics were investigated. In comparison with HN, LN significantly reduced nitrogen absorption and grain yield in both varieties. Concomitantly, there was a decrease in total root length, root surface area, root number, root volume, and root cortical area under LN, while single root length, root aerenchyma area, and root lignin content increased. The expression of OsAMT1;1 and OsAMT1;2 down-regulated in both varieties. The findings revealed that YD6 had smaller reduction degree for the three nitrogen absorption traits and grain yield, accompanied by smaller reduction degree in total root length, root surface area, root cortical area, and expression of the two genes under LN. These root characteristics were significantly and positively correlated with the three nitrogen absorption traits and grain yield, especially under LN. These results indicate that a large root system, lower reduction degree in several root characters, and high expression of OsAMT genes in YD6 explains its high nitrogen accumulation and grain yield under reduced nitrogen application. The study may provide rationale for developing varieties with low nitrogen fertilizer requirements for enabling green rice production.
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Affiliation(s)
- Lei Liu
- National Key Laboratory of Crop Genetic Improvement, Wuhan, Hubei, China
- Key Laboratory of Crop Ecophysiology and Farming System in the Middle Reaches of the Yangtze River, Ministry of Agriculture and Rural Affairs, Wuhan, Hubei, China
- College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, Hubei, China
| | - Kehui Cui
- National Key Laboratory of Crop Genetic Improvement, Wuhan, Hubei, China
- Key Laboratory of Crop Ecophysiology and Farming System in the Middle Reaches of the Yangtze River, Ministry of Agriculture and Rural Affairs, Wuhan, Hubei, China
- College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, Hubei, China
| | - Xiaoli Qi
- National Key Laboratory of Crop Genetic Improvement, Wuhan, Hubei, China
- Key Laboratory of Crop Ecophysiology and Farming System in the Middle Reaches of the Yangtze River, Ministry of Agriculture and Rural Affairs, Wuhan, Hubei, China
- College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, Hubei, China
| | - Yu Wu
- National Key Laboratory of Crop Genetic Improvement, Wuhan, Hubei, China
- Key Laboratory of Crop Ecophysiology and Farming System in the Middle Reaches of the Yangtze River, Ministry of Agriculture and Rural Affairs, Wuhan, Hubei, China
- College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, Hubei, China
| | - Jianliang Huang
- National Key Laboratory of Crop Genetic Improvement, Wuhan, Hubei, China
- Key Laboratory of Crop Ecophysiology and Farming System in the Middle Reaches of the Yangtze River, Ministry of Agriculture and Rural Affairs, Wuhan, Hubei, China
- College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, Hubei, China
| | - Shaobing Peng
- National Key Laboratory of Crop Genetic Improvement, Wuhan, Hubei, China
- Key Laboratory of Crop Ecophysiology and Farming System in the Middle Reaches of the Yangtze River, Ministry of Agriculture and Rural Affairs, Wuhan, Hubei, China
- College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, Hubei, China
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Corzo Remigio A, Harris HH, Paterson DJ, Edraki M, van der Ent A. Chemical transformations of arsenic in the rhizosphere-root interface of Pityrogramma calomelanos and Pteris vittata. Metallomics 2023; 15:mfad047. [PMID: 37528060 PMCID: PMC10427965 DOI: 10.1093/mtomcs/mfad047] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/16/2023] [Accepted: 07/31/2023] [Indexed: 08/03/2023]
Abstract
Pityrogramma calomelanos and Pteris vittata are cosmopolitan fern species that are the strongest known arsenic (As) hyperaccumulators, with potential to be used in the remediation of arsenic-contaminated mine tailings. However, it is currently unknown what chemical processes lead to uptake of As in the roots. This information is critical to identify As-contaminated soils that can be phytoremediated, or to improve the phytoremediation process. Therefore, this study identified the in situ distribution of As in the root interface leading to uptake in P. calomelanos and P. vittata, using a combination of synchrotron micro-X-ray fluorescence spectroscopy and X-ray absorption near-edge structure imaging to reveal chemical transformations of arsenic in the rhizosphere-root interface of these ferns. The dominant form of As in soils was As(V), even in As(III)-dosed soils, and the major form in P. calomelanos roots was As(III), while it was As(V) in P. vittata roots. Arsenic was cycled from roots growing in As-rich soil to roots growing in control soil. This study combined novel analytical approaches to elucidate the As cycling in the rhizosphere and roots enabling insights for further application in phytotechnologies to remediated As-polluted soils.
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Affiliation(s)
- Amelia Corzo Remigio
- Centre for Water in the Minerals Industry, Sustainable Minerals Institute, The University of Queensland, Brisbane, Australia
| | - Hugh H Harris
- Department of Chemistry, The University of Adelaide, Adelaide, Australia
| | | | - Mansour Edraki
- Centre for Water in the Minerals Industry, Sustainable Minerals Institute, The University of Queensland, Brisbane, Australia
| | - Antony van der Ent
- Centre for Mined Land Rehabilitation, Sustainable Minerals Institute, The University of Queensland, Brisbane, Australia
- Laboratory of Genetics, Wageningen University and Research, Wageningen, The Netherlands
- Laboratoire Sols et Environnement, INRAE, Université de Lorraine, Nancy, France
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Zhang H, Zhang X, Xiao J. Epigenetic Regulation of Nitrogen Signaling and Adaptation in Plants. PLANTS (BASEL, SWITZERLAND) 2023; 12:2725. [PMID: 37514337 PMCID: PMC10386408 DOI: 10.3390/plants12142725] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/19/2023] [Revised: 07/14/2023] [Accepted: 07/19/2023] [Indexed: 07/30/2023]
Abstract
Nitrogen (N) is a crucial nutrient that plays a significant role in enhancing crop yield. Its availability, including both supply and deficiency, serves as a crucial signal for plant development. However, excessive N use in agriculture leads to environmental and economic issues. Enhancing nitrogen use efficiency (NUE) is, therefore, essential to minimize negative impacts. Prior studies have investigated the genetic factors involved in N responses and the process of low-nitrogen (LN) adaptation. In this review, we discuss recent advances in understanding how epigenetic modifications, including DNA methylation, histone modification, and small RNA, participate in the regulation of N response and LN adaptation. We highlight the importance of decoding the epigenome at various levels to accelerate the functional study of how plants respond to N availability. Understanding the epigenetic control of N signaling and adaptation can lead to new strategies to improve NUE and enhance crop productivity sustainably.
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Affiliation(s)
- Hao Zhang
- State Key Laboratory of Plant Cell and Chromosome Engineering, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Xiaoyu Zhang
- State Key Laboratory of Plant Cell and Chromosome Engineering, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Jun Xiao
- State Key Laboratory of Plant Cell and Chromosome Engineering, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China
- University of Chinese Academy of Sciences, Beijing 100049, China
- Hebei Collaboration Innovation Center for Cell Signaling, Shijiazhuang 050024, China
- Centre of Excellence for Plant and Microbial Science (CEPAMS), JIC-CAS, Beijing 100101, China
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Montanari S, Salinitro M, Simoni A, Ciavatta C, Tassoni A. Foraging for selenium: a comparison between hyperaccumulator and non-accumulator plant species. Sci Rep 2023; 13:10661. [PMID: 37391494 PMCID: PMC10313833 DOI: 10.1038/s41598-023-37249-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2023] [Accepted: 06/19/2023] [Indexed: 07/02/2023] Open
Abstract
Selenium (Se) hyperaccumulators are a unique group of plants that can accumulate this element in their aerial parts at concentrations exceeding 100 mg kgDW-1. These plants actively search for Se in the soil, a phenomenon known as root foraging, reported to date only by few studies. In this study, the effect of localized Se enrichment, in the form of selenite and selenate, was investigated on the root architecture of two Se-hyperaccumulators (Stanleya pinnata and Astragalus bisulcatus) and two non-accumulators (Brassica juncea and Medicago sativa). Rhizoboxes were divided into two halves: one half was filled with control soil while the other with selenate or selenite (30 mg kgDW-1) spiked soil. Seedling were transferred into the interface of the two soils and allowed to grow for three weeks under controlled light and temperature conditions. Staneya pinnata exhibited equal root density in both halves of the rhizobox when grown in control/control and selenite/control soil treatments. However, in the presence of selenate, S. pinnata developed 76% of the roots towards the selenate-enriched half, indicating an active root foraging. In contrast, A. bisulcatus and the non-accumulators B. juncea and M. sativa did not show any preferential distribution of roots. This study revealed that only S. pinnata showed the ability to detect and forage for Se when provided as selenate. Non-accumulators did not show any morphological or Se-accumulation difference associated with the presence of Se in soil in either form.
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Affiliation(s)
- Sofia Montanari
- Department of Biological Geological and Environmental Sciences, University of Bologna, Via Irnerio 42, 40126, Bologna, Italy
| | - Mirko Salinitro
- Department of Biological Geological and Environmental Sciences, University of Bologna, Via Irnerio 42, 40126, Bologna, Italy.
| | - Andrea Simoni
- Department of Agricultural and Food Sciences, University of Bologna, Viale Giuseppe Fanin 40, 40127, Bologna, Italy
| | - Claudio Ciavatta
- Department of Agricultural and Food Sciences, University of Bologna, Viale Giuseppe Fanin 40, 40127, Bologna, Italy
- Centro Interdipartimentale di Ricerca Industriale sull'Agroalimentare, University of Bologna, Via Quinto Bucci 336, 47521, Cesena, Italy
| | - Annalisa Tassoni
- Department of Biological Geological and Environmental Sciences, University of Bologna, Via Irnerio 42, 40126, Bologna, Italy
- Centro Interdipartimentale di Ricerca Industriale sull'Agroalimentare, University of Bologna, Via Quinto Bucci 336, 47521, Cesena, Italy
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Roman A, Montenegro J, Fraile L, Urra M, Buezo J, Cornejo A, Moran JF, Gogorcena Y. Indole-3-acetaldoxime delays root iron-deficiency responses and modify auxin homeostasis in Medicago truncatula. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2023; 332:111718. [PMID: 37105378 DOI: 10.1016/j.plantsci.2023.111718] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/24/2022] [Revised: 03/18/2023] [Accepted: 04/23/2023] [Indexed: 05/06/2023]
Abstract
Iron (Fe) is an essential plant micronutrient, being a major limiting growth factor in calcareous soils. To increase Fe uptake, plants induce lateral roots growth, the expression of a Fe(III)-chelate reductase (FCR), a Fe(II)-transporter and a H+-ATPase and the secretion of flavins. Furthermore, auxin hormone family is involved in the Fe-deficiency responses but the action mechanism remains elusive. In this work, we evaluated the effect of the auxin-precursor indole-3-acetaldoxime (IAOx) on hydroponically grown Medicago truncatula plants under different Fe conditions. Upon 4-days of Fe starvation, the pH of the nutrient solution decreased, while both the FCR activity and the presence of flavins increased. Exogenous IAOx increased lateral roots growth contributing to superroot phenotype, decreased chlorosis, and delayed up to 3-days the pH-decrease, the FCR-activity increase, and the presence of flavins, compared to Fe-deficient plants. Gene expression levels were in concordance with the physiological responses. RESULTS: showed that IAOx was immediately transformed to IAN in roots and shoots to maintain auxin homeostasis. IAOx plays an active role in iron homeostasis delaying symptoms and responses in Fe-deficient plants. We may speculate that IAOx or its derivatives remobilize Fe from root cells to alleviate Fe-deficiency. Overall, these results point out that the IAOx-derived phenotype may have advantages to overcome nutritional stresses.
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Affiliation(s)
- Angela Roman
- Department of Pomology, Aula Dei Experimental Station, Consejo Superior de Investigaciones Científicas (CSIC), Avda. de Montañana 1005, E-50059 Zaragoza, Spain
| | - Joaquín Montenegro
- Department of Pomology, Aula Dei Experimental Station, Consejo Superior de Investigaciones Científicas (CSIC), Avda. de Montañana 1005, E-50059 Zaragoza, Spain
| | - Laura Fraile
- Department of Pomology, Aula Dei Experimental Station, Consejo Superior de Investigaciones Científicas (CSIC), Avda. de Montañana 1005, E-50059 Zaragoza, Spain
| | - Marina Urra
- Institute for Multidisciplinary Research in Applied Biology (IMAB), Department of Sciences, Public University of Navarre (UPNA), Avda. de Pamplona 123, E-31192 Mutilva, Spain
| | - Javier Buezo
- Institute for Multidisciplinary Research in Applied Biology (IMAB), Department of Sciences, Public University of Navarre (UPNA), Avda. de Pamplona 123, E-31192 Mutilva, Spain
| | - Alfonso Cornejo
- Institute for Advanced Materials and Mathematics (INAMAT2), Department of Sciences, Public University of Navarre (UPNA), Campus de Arrosadía, E-31006 Pamplona, Spain
| | - Jose Fernando Moran
- Institute for Multidisciplinary Research in Applied Biology (IMAB), Department of Sciences, Public University of Navarre (UPNA), Avda. de Pamplona 123, E-31192 Mutilva, Spain
| | - Yolanda Gogorcena
- Department of Pomology, Aula Dei Experimental Station, Consejo Superior de Investigaciones Científicas (CSIC), Avda. de Montañana 1005, E-50059 Zaragoza, Spain.
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30
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Zhang G, Liu Y, Xie Q, Tong H, Chu C. Crosstalk between brassinosteroid signaling and variable nutrient environments. SCIENCE CHINA. LIFE SCIENCES 2023:10.1007/s11427-022-2319-0. [PMID: 36907968 DOI: 10.1007/s11427-022-2319-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Received: 12/24/2022] [Accepted: 03/04/2023] [Indexed: 03/14/2023]
Abstract
Brassinosteroid (BR) represents a group of steroid hormones that regulate plant growth and development as well as environmental adaptation. The fluctuation of external nutrient elements is a situation that plants frequently face in the natural environment, in which nitrogen (N) and phosphorus (P) are two of the most critical nutrients restraint of the early growth of plants. As the macronutrients, N and P are highly required by plants, but their availability or solubility in the soil is relatively low. Since iron (Fe) and P always modulate each other's content and function in plants mutually antagonistically, the regulatory mechanisms of Fe and P are inextricably linked. Recently, BR has emerged as a critical regulator in nutrient acquisition and phenotypic plasticity in response to the variable nutrient levels in Arabidopsis and rice. Here, we review the current understanding of the crosstalk between BR and the three major nutrients (N, P, and Fe), highlighting how nutrient signaling regulates BR synthesis and signaling to accommodate plant growth and development in Arabidopsis and rice.
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Affiliation(s)
- Guoxia Zhang
- Guangdong Laboratory for Lingnan Modern Agriculture, State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, College of Agriculture, South China Agricultural University, Guangzhou, 510642, China.,State Key Laboratory of Plant Genomics, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, 100101, China.,Key Laboratory for Enhancing Resource Use Efficiency of Crops in South China, Ministry of Agriculture and Rural Affairs, South China Agricultural University, Guangzhou, 510642, China
| | - Yongqiang Liu
- State Key Laboratory of Plant Genomics, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, 100101, China
| | - Qingjun Xie
- Guangdong Laboratory for Lingnan Modern Agriculture, State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, College of Agriculture, South China Agricultural University, Guangzhou, 510642, China.,Key Laboratory for Enhancing Resource Use Efficiency of Crops in South China, Ministry of Agriculture and Rural Affairs, South China Agricultural University, Guangzhou, 510642, China
| | - Hongning Tong
- National Key Facility for Crop Gene Resources and Genetic Improvement, Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.
| | - Chengcai Chu
- Guangdong Laboratory for Lingnan Modern Agriculture, State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, College of Agriculture, South China Agricultural University, Guangzhou, 510642, China. .,State Key Laboratory of Plant Genomics, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, 100101, China. .,Key Laboratory for Enhancing Resource Use Efficiency of Crops in South China, Ministry of Agriculture and Rural Affairs, South China Agricultural University, Guangzhou, 510642, China.
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31
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Liu RX, Li HL, Rui L, Liu GD, Wang T, Wang XF, Li LG, Zhang Z, You CX. An apple NITRATE REDUCTASE 2 gene positively regulates nitrogen utilization and abiotic stress tolerance in Arabidopsis and apple callus. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2023; 196:23-32. [PMID: 36689830 DOI: 10.1016/j.plaphy.2023.01.026] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/10/2022] [Revised: 01/10/2023] [Accepted: 01/12/2023] [Indexed: 06/17/2023]
Abstract
Nitrogen (N) is an essential element that plays an important role in crop biomass accumulation and quality formation. Increased crop yield is relied on excessive application of fertilizers, which usually leads to environmental pollution and unsustainable development. Thus, identification and characterization of genes involved in promoting nitrogen use efficiency is of high priority in crop breeding. The activity of nitrate reductase (NR) plays a critical role in nitrogen metabolism. In model plant Arabidopsis, NITRATE REDUCTASE 2 (NIA2), one of the two NRs, is responsible for about 90% of the NR activity. In this study, MdNIA2 gene in apple (Malus domestica) genome was screened out and identified by using AtNIA2 as bait. Phylogenetic analysis revealed that MdNIA2 had the closest evolutionary relationship with MbNIA from Malus baccata. Ectopic expression of MdNIA2 in Arabidopsis elevated the nitrogen use efficiency and increased root hair elongation and formation, resulting in promoted plant growth. Furthermore, the overexpression of MdNIA2 improved salt and drought tolerance in transgenic Arabidopsis and improved the salt tolerance of transgenic apple callus, and MdNIA2-reagualted NO metabolism might contribute to the abiotic stress tolerance. Overall, our data indicate the critical role of MdNIA2 in regulating nitrogen utilization efficiency and abiotic stress responses.
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Affiliation(s)
- Ran-Xin Liu
- National Key Laboratory of Crop Biology, National Research Center for Apple Engineering and Technology, College of Horticulture Science and Engineering, Shandong Agricultural University, Tai-An, 271018, Shandong, China
| | - Hong-Liang Li
- National Key Laboratory of Crop Biology, National Research Center for Apple Engineering and Technology, College of Horticulture Science and Engineering, Shandong Agricultural University, Tai-An, 271018, Shandong, China
| | - Lin Rui
- National Key Laboratory of Crop Biology, National Research Center for Apple Engineering and Technology, College of Horticulture Science and Engineering, Shandong Agricultural University, Tai-An, 271018, Shandong, China
| | - Guo-Dong Liu
- National Key Laboratory of Crop Biology, National Research Center for Apple Engineering and Technology, College of Horticulture Science and Engineering, Shandong Agricultural University, Tai-An, 271018, Shandong, China
| | - Tian Wang
- National Key Laboratory of Crop Biology, National Research Center for Apple Engineering and Technology, College of Horticulture Science and Engineering, Shandong Agricultural University, Tai-An, 271018, Shandong, China
| | - Xiao-Fei Wang
- National Key Laboratory of Crop Biology, National Research Center for Apple Engineering and Technology, College of Horticulture Science and Engineering, Shandong Agricultural University, Tai-An, 271018, Shandong, China
| | - Lin-Guang Li
- Shandong Institute of Pomology, Tai-An, Shandong, 271000, China
| | - Zhenlu Zhang
- National Key Laboratory of Crop Biology, National Research Center for Apple Engineering and Technology, College of Horticulture Science and Engineering, Shandong Agricultural University, Tai-An, 271018, Shandong, China.
| | - Chun-Xiang You
- National Key Laboratory of Crop Biology, National Research Center for Apple Engineering and Technology, College of Horticulture Science and Engineering, Shandong Agricultural University, Tai-An, 271018, Shandong, China.
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Cun Z, Wu HM, Zhang JY, Shuang SP, Hong J, An TX, Chen JW. High nitrogen inhibits biomass and saponins accumulation in a medicinal plant Panax notoginseng. PeerJ 2023; 11:e14933. [PMID: 36846464 PMCID: PMC9951802 DOI: 10.7717/peerj.14933] [Citation(s) in RCA: 6] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/26/2022] [Accepted: 01/31/2023] [Indexed: 02/23/2023] Open
Abstract
Nitrogen (N) is an important macronutrient and is comprehensively involved in the synthesis of secondary metabolites. However, the interaction between N supply and crop yield and the accumulation of effective constituents in an N-sensitive medicinal plant Panax notoginseng (Burkill) F. H. Chen is not completely known. Morphological traits, N use and allocation, photosynthetic capacity and saponins accumulation were evaluated in two- and three-year-old P. notoginseng grown under different N regimes. The number and length of fibrous root, total root length and root volume were reduced with the increase of N supply. The accumulation of leaf and stem biomass (above-ground) were enhanced with increasing N supply, and LN-grown plants had the lowest root biomass. Above-ground biomass was closely correlated with N content, and the relationship between root biomass and N content was negatives in P. notoginseng (r = -0.92). N use efficiency-related parameters, NUE (N use efficiency, etc.), NC (N content in carboxylation system component) and P n (the net photosynthetic rate) were reduced in HN-grown P. notoginseng. SLN (specific leaf N), Chl (chlorophyll), NL (N content in light capture component) increased with an increase in N application. Interestingly, root biomass was positively correlated with NUE, yield and P n. Above-ground biomass was close negatively correlated with photosynthetic N use efficiency (PNUE). Saponins content was positively correlated with NUE and P n. Additionally, HN improved the root yield of per plant compared with LN, but reduced the accumulation of saponins, and the lowest yield of saponins per unit area (35.71 kg·hm-2) was recorded in HN-grown plants. HN-grown medicinal plants could inhibit the accumulation of root biomass by reducing N use and photosynthetic capacity, and HN-induced decrease in the accumulation of saponins (C-containing metabolites) might be closely related to the decline in N efficiency and photosynthetic capacity. Overall, N excess reduces the yield of root and C-containing secondary metabolites (active ingredient) in N-sensitive medicinal species such as P. notoginseng.
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Affiliation(s)
- Zhu Cun
- College of Agronomy & Biotechnology, Yunnan Agricultural University, Kunming, China,National & Local Joint Engineering Research Center on Germplasm Innovation & Utilization of Chinese Medicinal Materials in Southwestern China, Yunnan Agricultural University, Kunming, China,Key Laboratory of Medicinal Plant Biology of Yunnan Province, Yunnan Agricultural University, Kunming, China
| | - Hong-Min Wu
- College of Agronomy & Biotechnology, Yunnan Agricultural University, Kunming, China,National & Local Joint Engineering Research Center on Germplasm Innovation & Utilization of Chinese Medicinal Materials in Southwestern China, Yunnan Agricultural University, Kunming, China,Key Laboratory of Medicinal Plant Biology of Yunnan Province, Yunnan Agricultural University, Kunming, China
| | - Jin-Yan Zhang
- College of Agronomy & Biotechnology, Yunnan Agricultural University, Kunming, China,National & Local Joint Engineering Research Center on Germplasm Innovation & Utilization of Chinese Medicinal Materials in Southwestern China, Yunnan Agricultural University, Kunming, China,Key Laboratory of Medicinal Plant Biology of Yunnan Province, Yunnan Agricultural University, Kunming, China
| | - Sheng-Pu Shuang
- College of Agronomy & Biotechnology, Yunnan Agricultural University, Kunming, China,National & Local Joint Engineering Research Center on Germplasm Innovation & Utilization of Chinese Medicinal Materials in Southwestern China, Yunnan Agricultural University, Kunming, China,Key Laboratory of Medicinal Plant Biology of Yunnan Province, Yunnan Agricultural University, Kunming, China
| | - Jie Hong
- College of Agronomy & Biotechnology, Yunnan Agricultural University, Kunming, China,National & Local Joint Engineering Research Center on Germplasm Innovation & Utilization of Chinese Medicinal Materials in Southwestern China, Yunnan Agricultural University, Kunming, China,Key Laboratory of Medicinal Plant Biology of Yunnan Province, Yunnan Agricultural University, Kunming, China
| | - Tong-Xin An
- College of Agronomy & Biotechnology, Yunnan Agricultural University, Kunming, China
| | - Jun-Wen Chen
- College of Agronomy & Biotechnology, Yunnan Agricultural University, Kunming, China,National & Local Joint Engineering Research Center on Germplasm Innovation & Utilization of Chinese Medicinal Materials in Southwestern China, Yunnan Agricultural University, Kunming, China,Key Laboratory of Medicinal Plant Biology of Yunnan Province, Yunnan Agricultural University, Kunming, China
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Veatch-Blohm ME, Medina G, Butler J. Early lateral root formation in response to calcium and nickel shows variation within disjunct populations of Arabidopsis lyrata spp. lyrata. Heliyon 2023; 9:e13632. [PMID: 36846704 PMCID: PMC9950942 DOI: 10.1016/j.heliyon.2023.e13632] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/29/2022] [Revised: 01/27/2023] [Accepted: 02/06/2023] [Indexed: 02/11/2023] Open
Abstract
Root architecture is important in nutrient uptake and avoidance of toxic compounds within the soil. Arabidopsis lyrata spp. lyrata has widespread distribution in disjunct environments that encounter unique stressors starting at germination. Five populations of A. lyrata spp. lyrata show local adaptation to Nickel (Ni) but cross-tolerance to variations in Calcium (Ca) concentration within the soil. Differentiation among the populations begins early in development and appears to impact timing of lateral root formation; therefore the purpose of the study was to understand changes in root architecture and root exploration in response to Ca and Ni within the first three weeks of growth. Lateral root formation was first characterized under one concentration of Ca and Ni. Lateral root formation and tap root length were reduced in all five populations in response to Ni compared to Ca, with the least reduction in the three serpentine populations. When the populations were exposed to a gradient (either Ca or Ni) there were differences in population response based on the nature of the gradient. Start side was the greatest determinant of root exploration and lateral root formation under a Ca gradient, while population was the greatest determinant of root exploration and lateral root formation under a Ni gradient. All populations exhibited about the same frequency of root exploration under a Ca gradient, while the serpentine populations exhibited much higher levels of root exploration under a Ni gradient compared to the two non-serpentine populations. Differences among populations in response to Ca and Ni demonstrate the importance of stress responses early in development, particularly in species that have widespread distribution among disparate habitats.
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Kenesi E, Kolbert Z, Kaszler N, Klement É, Ménesi D, Molnár Á, Valkai I, Feigl G, Rigó G, Cséplő Á, Lindermayr C, Fehér A. The ROP2 GTPase Participates in Nitric Oxide (NO)-Induced Root Shortening in Arabidopsis. PLANTS (BASEL, SWITZERLAND) 2023; 12:750. [PMID: 36840099 PMCID: PMC9964108 DOI: 10.3390/plants12040750] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/07/2022] [Revised: 01/20/2023] [Accepted: 02/03/2023] [Indexed: 06/18/2023]
Abstract
Nitric oxide (NO) is a versatile signal molecule that mediates environmental and hormonal signals orchestrating plant development. NO may act via reversible S-nitrosation of proteins during which an NO moiety is added to a cysteine thiol to form an S-nitrosothiol. In plants, several proteins implicated in hormonal signaling have been reported to undergo S-nitrosation. Here, we report that the Arabidopsis ROP2 GTPase is a further potential target of NO-mediated regulation. The ROP2 GTPase was found to be required for the root shortening effect of NO. NO inhibits primary root growth by altering the abundance and distribution of the PIN1 auxin efflux carrier protein and lowering the accumulation of auxin in the root meristem. In rop2-1 insertion mutants, however, wild-type-like root size of the NO-treated roots were maintained in agreement with wild-type-like PIN1 abundance in the meristem. The ROP2 GTPase was shown to be S-nitrosated in vitro, suggesting that NO might directly regulate the GTPase. The potential mechanisms of NO-mediated ROP2 GTPase regulation and ROP2-mediated NO signaling in the primary root meristem are discussed.
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Affiliation(s)
- Erzsébet Kenesi
- Institute of Plant Biology, Biological Research Centre, Eötvös Lóránd Research Network, Temesvári Krt. 62, H-6726 Szeged, Hungary
| | - Zsuzsanna Kolbert
- Department of Plant Biology, University of Szeged, Közép Fasor 52, H-6726 Szeged, Hungary
| | - Nikolett Kaszler
- Institute of Plant Biology, Biological Research Centre, Eötvös Lóránd Research Network, Temesvári Krt. 62, H-6726 Szeged, Hungary
- Department of Plant Biology, University of Szeged, Közép Fasor 52, H-6726 Szeged, Hungary
| | - Éva Klement
- Laboratory of Proteomics Research, Biological Research Centre, Eötvös Lóránd Research Network, Temesvári Krt. 62, H-6726 Szeged, Hungary
- Hungarian Centre of Excellence for Molecular Medicine, Single Cell Omics ACF, H-6728 Szeged, Hungary
| | - Dalma Ménesi
- Institute of Plant Biology, Biological Research Centre, Eötvös Lóránd Research Network, Temesvári Krt. 62, H-6726 Szeged, Hungary
| | - Árpád Molnár
- Department of Plant Biology, University of Szeged, Közép Fasor 52, H-6726 Szeged, Hungary
| | - Ildikó Valkai
- Institute of Plant Biology, Biological Research Centre, Eötvös Lóránd Research Network, Temesvári Krt. 62, H-6726 Szeged, Hungary
| | - Gábor Feigl
- Department of Plant Biology, University of Szeged, Közép Fasor 52, H-6726 Szeged, Hungary
| | - Gábor Rigó
- Institute of Plant Biology, Biological Research Centre, Eötvös Lóránd Research Network, Temesvári Krt. 62, H-6726 Szeged, Hungary
| | - Ágnes Cséplő
- Institute of Plant Biology, Biological Research Centre, Eötvös Lóránd Research Network, Temesvári Krt. 62, H-6726 Szeged, Hungary
| | - Christian Lindermayr
- Institute of Biochemical Plant Pathology, Helmholtz Zentrum München—German Research Center for Environmental Health, Ingolstädter Landstraße 1, D-85764 Neuherberg, Germany
| | - Attila Fehér
- Institute of Plant Biology, Biological Research Centre, Eötvös Lóránd Research Network, Temesvári Krt. 62, H-6726 Szeged, Hungary
- Department of Plant Biology, University of Szeged, Közép Fasor 52, H-6726 Szeged, Hungary
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Yang Y, Wang R, Wang L, Cui R, Zhang H, Che Z, Hu D, Chu S, Jiao Y, Yu D, Zhang D. GmEIL4 enhances soybean (Glycine max) phosphorus efficiency by improving root system development. PLANT, CELL & ENVIRONMENT 2023; 46:592-606. [PMID: 36419232 DOI: 10.1111/pce.14497] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/24/2022] [Revised: 11/01/2022] [Accepted: 11/22/2022] [Indexed: 06/16/2023]
Abstract
Phosphorus (P) deficiency seriously affects plant growth and development and ultimately limits the quality and yield of crops. Here, a new P efficiency-related major quantitative trait locus gene, GmEIL4 (encoding an ethylene-insensitive 3-like 1 protein), was cloned at qP2, which was identified by linkage analysis and genome-wide association study across four environments. Overexpressing GmEIL4 significantly improved the P uptake efficiency by increasing the number, length and surface area of lateral roots of hairy roots in transgenic soybeans, while interfering with GmEIL4 resulted in poor root phenotypic characteristics compared with the control plants under low P conditions. Interestingly, we found that GmEIL4 interacted with EIN3-binding F box protein 1 (GmEBF1), which may regulate the root response to low P stress. We conclude that the expression of GmEIL4 was induced by low-P stress and that overexpressing GmEIL4 improved P accumulation by regulating root elongation and architecture. Analysis of allele variation of GmEIL4 in 894 soybean accessions suggested that GmEIL4 is undergoing artificial selection during soybean evolution, which will benefit soybean production. Together, this study further elucidates how plants respond to low P stress by modifying root structure and provides insight into the great potential of GmEIL4 in crop P-efficient breeding.
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Affiliation(s)
- Yuming Yang
- Department of Agriculture, Collaborative Innovation Center of Henan Grain Crops, College of Agronomy, Henan Agricultural University, Zhengzhou, China
| | - Ruiyang Wang
- Department of Agriculture, Collaborative Innovation Center of Henan Grain Crops, College of Agronomy, Henan Agricultural University, Zhengzhou, China
| | - Li Wang
- National Key Laboratory of Crop Genetics and Germplasm Enhancement, National Center for Soybean Improvement, Nanjing Agricultural University, Nanjing, China
| | - Ruifan Cui
- Department of Agriculture, Collaborative Innovation Center of Henan Grain Crops, College of Agronomy, Henan Agricultural University, Zhengzhou, China
| | - Hengyou Zhang
- Key Laboratory of Soybean Molecular Design Breeding, Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Harbin, China
| | | | - Dandan Hu
- Department of Agriculture, Collaborative Innovation Center of Henan Grain Crops, College of Agronomy, Henan Agricultural University, Zhengzhou, China
| | - Shanshan Chu
- Department of Agriculture, Collaborative Innovation Center of Henan Grain Crops, College of Agronomy, Henan Agricultural University, Zhengzhou, China
| | - Yongqing Jiao
- Department of Agriculture, Collaborative Innovation Center of Henan Grain Crops, College of Agronomy, Henan Agricultural University, Zhengzhou, China
| | - Deyue Yu
- National Key Laboratory of Crop Genetics and Germplasm Enhancement, National Center for Soybean Improvement, Nanjing Agricultural University, Nanjing, China
| | - Dan Zhang
- Department of Agriculture, Collaborative Innovation Center of Henan Grain Crops, College of Agronomy, Henan Agricultural University, Zhengzhou, China
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Ma B, Ma T, Xian W, Hu B, Chu C. Interplay between ethylene and nitrogen nutrition: How ethylene orchestrates nitrogen responses in plants. JOURNAL OF INTEGRATIVE PLANT BIOLOGY 2023; 65:399-407. [PMID: 36053148 DOI: 10.1111/jipb.13355] [Citation(s) in RCA: 8] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/29/2022] [Revised: 09/01/2022] [Accepted: 09/01/2022] [Indexed: 06/15/2023]
Abstract
The stress hormone ethylene plays a key role in plant adaptation to adverse environmental conditions. Nitrogen (N) is the most quantitatively required mineral nutrient for plants, and its availability is a major determinant for crop production. Changes in N availability or N forms can alter ethylene biosynthesis and/or signaling. Ethylene serves as an important cellular signal to mediate root system architecture adaptation, N uptake and translocation, ammonium toxicity, anthocyanin accumulation, and premature senescence, thereby adapting plant growth and development to external N status. Here, we review the ethylene-mediated morphological and physiological responses and highlight how ethylene transduces the N signals to the adaptive responses. We specifically discuss the N-ethylene relations in rice, an important cereal crop in which ethylene is essential for its hypoxia survival.
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Affiliation(s)
- Biao Ma
- Guangdong Laboratory for Lingnan Modern Agriculture, State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, College of Agriculture, South China Agricultural University, Guangzhou, 510642, China
| | - Tian Ma
- Guangdong Laboratory for Lingnan Modern Agriculture, State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, College of Agriculture, South China Agricultural University, Guangzhou, 510642, China
| | - Wenhao Xian
- Guangdong Laboratory for Lingnan Modern Agriculture, State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, College of Agriculture, South China Agricultural University, Guangzhou, 510642, China
| | - Bin Hu
- Guangdong Laboratory for Lingnan Modern Agriculture, State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, College of Agriculture, South China Agricultural University, Guangzhou, 510642, China
| | - Chengcai Chu
- Guangdong Laboratory for Lingnan Modern Agriculture, State Key Laboratory for Conservation and Utilization of Subtropical Agro-Bioresources, College of Agriculture, South China Agricultural University, Guangzhou, 510642, China
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Morales-Herrera S, Rubilar-Hernández C, Pérez-Henríquez P, Norambuena L. Endocytic trafficking induces lateral root founder cell specification in Arabidopsis thaliana in a process distinct from the auxin-induced pathway. FRONTIERS IN PLANT SCIENCE 2023; 13:1060021. [PMID: 36726665 PMCID: PMC9885164 DOI: 10.3389/fpls.2022.1060021] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/02/2022] [Accepted: 11/30/2022] [Indexed: 06/18/2023]
Abstract
Plants can modify their body structure, such as their root architecture, post-embryonically. For example, Arabidopsis thaliana can develop lateral roots as part of an endogenous program or in response to biotic and abiotic stimuli. Root pericycle cells are specified to become lateral root founder cells, initiating lateral root organogenesis. We used the endocytic trafficking inducer Sortin2 to examine the role of endomembrane trafficking in lateral root founder cell specification. Our results indicate that Sortin2 stimulation turns on a de novo program of lateral root primordium formation that is distinct from the endogenous program driven by auxin. In this distinctive mechanism, extracellular calcium uptake and endocytic trafficking toward the vacuole are required for lateral root founder cell specification upstream of the auxin module led by AUX/IAA28. The auxin-dependent TIR1/AFB F-boxes and auxin polar transport are dispensable for the endocytic trafficking-dependent lateral root founder cell specification; however, a different set of F-box proteins and a functional SCF complex are required. The endocytic trafficking could constitute a convenient strategy for organogenesis in response to environmental conditions.
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Mandal D, Datta S, Raveendar G, Mondal PK, Nag Chaudhuri R. RAV1 mediates cytokinin signaling for regulating primary root growth in Arabidopsis. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2023; 113:106-126. [PMID: 36423224 DOI: 10.1111/tpj.16039] [Citation(s) in RCA: 7] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/15/2022] [Revised: 11/11/2022] [Accepted: 11/17/2022] [Indexed: 06/16/2023]
Abstract
Root growth dynamics is an outcome of complex hormonal crosstalk. The primary root meristem size, for example, is determined by antagonizing actions of cytokinin and auxin. Here we show that RAV1, a member of the AP2/ERF family of transcription factors, mediates cytokinin signaling in roots to regulate meristem size. The rav1 mutants have prominently longer primary roots, with a meristem that is significantly enlarged and contains higher cell numbers, compared with wild-type. The mutant phenotype could be restored on exogenous cytokinin application or by inhibiting auxin transport. At the transcript level, primary cytokinin-responsive genes like ARR1, ARR12 were significantly downregulated in the mutant root, indicating impaired cytokinin signaling. In concurrence, cytokinin induced regulation of SHY2, an Aux/IAA gene, and auxin efflux carrier PIN1 was hindered in rav1, leading to altered auxin transport and distribution. This effectively altered root meristem size in the mutant. Notably, CRF1, another member of the AP2/ERF family implicated in cytokinin signaling, is transcriptionally repressed by RAV1 to promote cytokinin response in roots. Further associating RAV1 with cytokinin signaling, our results demonstrate that cytokinin upregulates RAV1 expression through ARR1, during post-embryonic root development. Regulation of RAV1 expression is a part of secondary cytokinin response that eventually represses CRF1 to augment cytokinin signaling. To conclude, RAV1 functions in a branch pathway downstream to ARR1 that regulates CRF1 expression to enhance cytokinin action during primary root development in Arabidopsis.
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Affiliation(s)
- Drishti Mandal
- Department of Biotechnology, St Xavier's College, 30, Mother Teresa Sarani, Kolkata, 700016, India
| | - Saptarshi Datta
- Department of Biotechnology, St Xavier's College, 30, Mother Teresa Sarani, Kolkata, 700016, India
| | - Giridhar Raveendar
- Department of Mechanical Engineering, Indian Institute of Technology, Surjyamukhi Road, Amingaon, Guwahati, Assam, 781039, India
| | - Pranab Kumar Mondal
- Department of Mechanical Engineering, Indian Institute of Technology, Surjyamukhi Road, Amingaon, Guwahati, Assam, 781039, India
| | - Ronita Nag Chaudhuri
- Department of Biotechnology, St Xavier's College, 30, Mother Teresa Sarani, Kolkata, 700016, India
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Nitrate availability controls translocation of the transcription factor NAC075 for cell-type-specific reprogramming of root growth. Dev Cell 2022; 57:2638-2651.e6. [PMID: 36473460 DOI: 10.1016/j.devcel.2022.11.006] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2021] [Revised: 08/22/2022] [Accepted: 11/07/2022] [Indexed: 12/12/2022]
Abstract
Plant root architecture flexibly adapts to changing nitrate (NO3-) availability in the soil; however, the underlying molecular mechanism of this adaptive development remains under-studied. To explore the regulation of NO3--mediated root growth, we screened for low-nitrate-resistant mutant (lonr) and identified mutants that were defective in the NAC transcription factor NAC075 (lonr1) as being less sensitive to low NO3- in terms of primary root growth. We show that NAC075 is a mobile transcription factor relocating from the root stele tissues to the endodermis based on NO3- availability. Under low-NO3- availability, the kinase CBL-interacting protein kinase 1 (CIPK1) is activated, and it phosphorylates NAC075, restricting its movement from the stele, which leads to the transcriptional regulation of downstream target WRKY53, consequently leading to adapted root architecture. Our work thus identifies an adaptive mechanism involving translocation of transcription factor based on nutrient availability and leading to cell-specific reprogramming of plant root growth.
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40
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Xing J, Cao X, Zhang M, Wei X, Zhang J, Wan X. Plant nitrogen availability and crosstalk with phytohormones signallings and their biotechnology breeding application in crops. PLANT BIOTECHNOLOGY JOURNAL 2022. [PMID: 36435985 DOI: 10.1111/pbi.13971] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/13/2022] [Revised: 10/27/2022] [Accepted: 11/20/2022] [Indexed: 06/16/2023]
Abstract
Nitrogen (N), one of the most important nutrients, limits plant growth and crop yields in sustainable agriculture system, in which phytohormones are known to play essential roles in N availability. Hence, it is not surprising that massive studies about the crosstalk between N and phytohormones have been constantly emerging. In this review, with the intellectual landscape of N and phytohormones crosstalk provided by the bibliometric analysis, we trace the research story of best-known crosstalk between N and various phytohormones over the last 20 years. Then, we discuss how N regulates various phytohormones biosynthesis and transport in plants. In reverse, we also summarize how phytohormones signallings modulate root system architecture (RSA) in response to N availability. Besides, we expand to outline how phytohormones signallings regulate uptake, transport, and assimilation of N in plants. Further, we conclude advanced biotechnology strategies, explain their application, and provide potential phytohormones-regulated N use efficiency (NUE) targets in crops. Collectively, this review provides not only a better understanding on the recent progress of crosstalk between N and phytohormones, but also targeted strategies for improvement of NUE to increase crop yields in future biotechnology breeding of crops.
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Affiliation(s)
- Jiapeng Xing
- Research Center of Biology and Agriculture, Shunde Innovation School, School of Chemistry and Biological Engineering, University of Science and Technology Beijing (USTB), Beijing, China
- Beijing Engineering Laboratory of Main Crop Bio-Tech Breeding, Beijing International Science and Technology Cooperation Base of Bio-Tech Breeding, Zhongzhi International Institute of Agricultural Biosciences, Beijing, China
| | - Xiaocong Cao
- Research Center of Biology and Agriculture, Shunde Innovation School, School of Chemistry and Biological Engineering, University of Science and Technology Beijing (USTB), Beijing, China
- Beijing Engineering Laboratory of Main Crop Bio-Tech Breeding, Beijing International Science and Technology Cooperation Base of Bio-Tech Breeding, Zhongzhi International Institute of Agricultural Biosciences, Beijing, China
| | - Mingcai Zhang
- State Key Laboratory of Plant Physiology and Biochemistry, College of Agronomy and Biotechnology, China Agricultural University, Beijing, China
| | - Xun Wei
- Research Center of Biology and Agriculture, Shunde Innovation School, School of Chemistry and Biological Engineering, University of Science and Technology Beijing (USTB), Beijing, China
- Beijing Engineering Laboratory of Main Crop Bio-Tech Breeding, Beijing International Science and Technology Cooperation Base of Bio-Tech Breeding, Zhongzhi International Institute of Agricultural Biosciences, Beijing, China
| | - Juan Zhang
- Research Center of Biology and Agriculture, Shunde Innovation School, School of Chemistry and Biological Engineering, University of Science and Technology Beijing (USTB), Beijing, China
- Beijing Engineering Laboratory of Main Crop Bio-Tech Breeding, Beijing International Science and Technology Cooperation Base of Bio-Tech Breeding, Zhongzhi International Institute of Agricultural Biosciences, Beijing, China
| | - Xiangyuan Wan
- Research Center of Biology and Agriculture, Shunde Innovation School, School of Chemistry and Biological Engineering, University of Science and Technology Beijing (USTB), Beijing, China
- Beijing Engineering Laboratory of Main Crop Bio-Tech Breeding, Beijing International Science and Technology Cooperation Base of Bio-Tech Breeding, Zhongzhi International Institute of Agricultural Biosciences, Beijing, China
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41
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Impact of cropping systems on pedogenic distribution and transformations of micronutrients, plant accumulation and microbial community composition in soils: a review. Trop Ecol 2022. [DOI: 10.1007/s42965-022-00272-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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MacTavish R, Anderson JT. Water and nutrient availability exert selection on reproductive phenology. AMERICAN JOURNAL OF BOTANY 2022; 109:1702-1716. [PMID: 36031862 DOI: 10.1002/ajb2.16057] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/25/2022] [Revised: 07/22/2022] [Accepted: 07/22/2022] [Indexed: 06/15/2023]
Abstract
PREMISE Global change has changed resource availability to plants, which could shift the adaptive landscape. We hypothesize that novel water and nutrient availability combinations alter patterns of natural selection on reproductive phenology in Boechera stricta (Brassicaceae) and influence the evolution of local adaptation. METHODS We conducted a multifactorial greenhouse study using 35 accessions of B. stricta sourced from a broad elevational gradient in the Rocky Mountains. We exposed full siblings to three soil water and two nutrient availability treatment levels, reflecting current and projected future conditions. In addition, we quantified fitness (seed count) and four phenological traits: the timing of first flowering, the duration of flowering, and height and leaf number at flowering. RESULTS Selection favored early flowering and longer duration of flowering, and the genetic correlation between these traits accorded with the direction of selection. In most treatments, we found selection for increased height, but selection on leaf number depended on water availability, with selection favoring more leaves in well-watered conditions and fewer leaves under severe drought. Low-elevation genotypes had the greatest fitness under drought stress, consistent with local adaptation. CONCLUSIONS We found evidence of strong selection on these heritable traits. Furthermore, the direction and strength of selection on size at flowering depended on the variable measured (height vs. leaf number). Finally, selection often favored both early flowering and a longer duration of flowering. Selection on these two components of phenology can be difficult to disentangle due to tight genetic correlations.
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Affiliation(s)
- Rachel MacTavish
- Department of Genetics and Odum School of Ecology, University of Georgia, Athens, GA, 30602, USA
| | - Jill T Anderson
- Department of Genetics and Odum School of Ecology, University of Georgia, Athens, GA, 30602, USA
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Treatments with Liquid Smoke and Certain Chemical Constituents Prevalent in Smoke Reduce Phloem Vascular Sectoriality in the Sunflower with Improvement to Growth. Int J Mol Sci 2022; 23:ijms232012468. [DOI: 10.3390/ijms232012468] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/14/2022] [Revised: 10/11/2022] [Accepted: 10/13/2022] [Indexed: 11/16/2022] Open
Abstract
Many higher plants possess a physiological organization that is based upon the carbon economy of their parts. While photosynthates are partitioned according to the relative strength of the plant’s sink tissues, in many species there is also a very close relationship between partitioning, phyllotaxy and vascular connectivity giving rise to sectorial patterns of allocation. Here, we examined the influence of smoke and certain chemical constituents prevalent in smoke including, catechol, resorcinol and hydroquinone on phloem vascular sectoriality in common sunflower (Helianthis annuus L.), as a model plant for sectoriality. By administering radioactive carbon-11 to a single source leaf as 11CO2, 11C-photosynthate allocation patterns were examined using autoradiography. A 1:200 aqueous dilution of liquid smoke treated soil caused 2.6-fold and 2.5-fold reductions in phloem sectoriality in sink leaves and roots, respectively. Treatment with catechol (1,2-d ihydroxybenzene) or resorcinol (1,3-dihydroxybenzene), polyphenolic constituents that are prevalent in smoke, caused similar reductions in phloem sectoriality in the same targeted sink tissues. However, treatment with hydroquinone (1,4-dihydroxybenzene) had no effect. Finally, the longer-term effects of smoke exposure on plant growth and performance were examined using outdoor potted plants grown over the 2022 season. Plants exposed to liquid smoke treatments of the soil on a weekly basis had larger thicker leaves possessing 35% greater lignin content than untreated control plants. They also had thicker stems although the lignin content was the same as controls. Additionally, plants exposed to treatment produced twice the number of flowers with no difference in their disk floret diameters as untreated controls. Altogether, loss of phloem sectoriality from exposure to liquid smoke in the sunflower model benefited plant performance.
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Chai S, Chen J, Yue X, Li C, Zhang Q, de Dios VR, Yao Y, Tan W. Interaction of BES1 and LBD37 transcription factors modulates brassinosteroid-regulated root forging response under low nitrogen in arabidopsis. FRONTIERS IN PLANT SCIENCE 2022; 13:998961. [PMID: 36247555 PMCID: PMC9555238 DOI: 10.3389/fpls.2022.998961] [Citation(s) in RCA: 11] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/20/2022] [Accepted: 09/12/2022] [Indexed: 06/16/2023]
Abstract
Brassinosteriod (BR) plays important roles in regulation of plant growth, development and environmental responses. BR signaling regulates multiple biological processes through controlling the activity of BES1/BZR1 regulators. Apart from the roles in the promotion of plant growth, BR is also involved in regulation of the root foraging response under low nitrogen, however how BR signaling regulate this process remains unclear. Here we show that BES1 and LBD37 antagonistically regulate root foraging response under low nitrogen conditions. Both the transcriptional level and dephosphorylated level of BES1, is significant induced by low nitrogen, predominantly in root. Phenotypic analysis showed that BES1 gain-of-function mutant or BES1 overexpression transgenic plants exhibits progressive outgrowth of lateral root in response to low nitrogen and BES1 negatively regulates repressors of nitrate signaling pathway and positively regulates several key genes required for NO3 - uptake and signaling. In contrast, BES1 knock-down mutant BES1-RNAi exhibited a dramatical reduction of lateral root elongation in response to low N. Furthermore, we identified a BES1 interacting protein, LBD37, which is a negative repressor of N availability signals. Our results showed that BES1 can inhibit LBD37 transcriptional repression on N-responsive genes. Our results thus demonstrated that BES1-LBD37 module acts critical nodes to integrate BR signaling and nitrogen signaling to modulate the root forging response at LN condition.
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Affiliation(s)
- Shuli Chai
- School of Life Science and Engineering, Southwest University of Science and Technology, Mianyang, China
| | - Junhua Chen
- School of Life Science and Engineering, Southwest University of Science and Technology, Mianyang, China
| | - Xiaolan Yue
- School of Life Science and Engineering, Southwest University of Science and Technology, Mianyang, China
| | - Chenlin Li
- School of Life Science and Engineering, Southwest University of Science and Technology, Mianyang, China
| | - Qiang Zhang
- School of Life Science and Engineering, Southwest University of Science and Technology, Mianyang, China
| | - Víctor Resco de Dios
- School of Life Science and Engineering, Southwest University of Science and Technology, Mianyang, China
- Department of Crop and Forest Sciences & Agrotecnio Center, Universitat de Lleida, Leida, Spain
| | - Yinan Yao
- School of Life Science and Engineering, Southwest University of Science and Technology, Mianyang, China
| | - Wenrong Tan
- School of Life Science and Engineering, Southwest University of Science and Technology, Mianyang, China
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45
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Russo SE, Ledder G, Muller EB, Nisbet RM. Dynamic Energy Budget models: fertile ground for understanding resource allocation in plants in a changing world. CONSERVATION PHYSIOLOGY 2022; 10:coac061. [PMID: 36128259 PMCID: PMC9477497 DOI: 10.1093/conphys/coac061] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/31/2022] [Revised: 06/08/2022] [Accepted: 08/17/2022] [Indexed: 06/15/2023]
Abstract
Climate change is having dramatic effects on the diversity and distribution of species. Many of these effects are mediated by how an organism's physiological patterns of resource allocation translate into fitness through effects on growth, survival and reproduction. Empirically, resource allocation is challenging to measure directly and so has often been approached using mathematical models, such as Dynamic Energy Budget (DEB) models. The fact that all plants require a very similar set of exogenous resources, namely light, water and nutrients, integrates well with the DEB framework in which a small number of variables and processes linked through pathways represent an organism's state as it changes through time. Most DEB theory has been developed in reference to animals and microorganisms. However, terrestrial vascular plants differ from these organisms in fundamental ways that make resource allocation, and the trade-offs and feedbacks arising from it, particularly fundamental to their life histories, but also challenging to represent using existing DEB theory. Here, we describe key features of the anatomy, morphology, physiology, biochemistry, and ecology of terrestrial vascular plants that should be considered in the development of a generic DEB model for plants. We then describe possible approaches to doing so using existing DEB theory and point out features that may require significant development for DEB theory to accommodate them. We end by presenting a generic DEB model for plants that accounts for many of these key features and describing gaps that would need to be addressed for DEB theory to predict the responses of plants to climate change. DEB models offer a powerful and generalizable framework for modelling resource allocation in terrestrial vascular plants, and our review contributes a framework for expansion and development of DEB theory to address how plants respond to anthropogenic change.
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Affiliation(s)
- Sabrina E Russo
- School of Biological Sciences, University of Nebraska, 1104 T Street Lincoln, Nebraska 68588-0118, USA
- Center for Plant Science Innovation, University of Nebraska, 1901 Vine Street, N300 Beadle Center, Lincoln, Nebraska 68588-0660, USA
| | - Glenn Ledder
- Department of Mathematics, University of Nebraska, 203 Avery Hall, Lincoln, Nebraska 68588-0130, USA
| | - Erik B Muller
- Marine Science Institute, University of California, Santa Barbara, California 93106, USA
- Institut für Biologische Analytik und Consulting IBACON GmbH, Arheilger Weg 17 Roß dorf, Hesse D-64380, Germany
| | - Roger M Nisbet
- Marine Science Institute, University of California, Santa Barbara, California 93106, USA
- Department of Ecology, Evolution and Marine Biology, University of California, Santa Barbara, California 93106, USA
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Wu X, Xie X, Yang S, Yin Q, Cao H, Dong X, Hui J, Liu Z, Jia Z, Mao C, Yuan L. OsAMT1;1 and OsAMT1;2 Coordinate Root Morphological and Physiological Responses to Ammonium for Efficient Nitrogen Foraging in Rice. PLANT & CELL PHYSIOLOGY 2022; 63:1309-1320. [PMID: 35861152 DOI: 10.1093/pcp/pcac104] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/01/2022] [Revised: 06/28/2022] [Accepted: 07/20/2022] [Indexed: 06/15/2023]
Abstract
Optimal plant growth and development rely on morphological and physiological adaptions of the root system to forage heterogeneously distributed nitrogen (N) in soils. Rice grows mainly in the paddy soil where ammonium (NH4+) is present as the major N source. Although root NH4+ foraging behaviors are expected to be agronomically relevant, the underlying mechanism remains largely unknown. Here, we showed that NH4+ supply transiently enhanced the high-affinity NH4+ uptake and stimulated lateral root (LR) branching and elongation. These synergistic physiological and morphological responses were closely related to NH4+-induced expression of NH4+ transporters OsAMT1;1 and OsAMT1;2 in roots. The two independent double mutants (dko) defective in OsAMT1;1 and OsAMT1;2 failed to induce NH4+ uptake and stimulate LR formation, suggesting that OsAMT1s conferred the substrate-dependent root NH4+ foraging. In dko plants, NH4+ was unable to activate the expression of OsPIN2, and the OsPIN2 mutant (lra1) exhibited a strong reduction in NH4+-triggered LR branching, suggesting that the auxin pathway was likely involved in OsAMT1s-dependent LR branching. Importantly, OsAMT1s-dependent root NH4+ foraging behaviors facilitated rice growth and N acquisition under fluctuating NH4+ supply. These results revealed an essential role of OsAMT1s in synergizing root morphological and physiological processes, allowing for efficient root NH4+ foraging to optimize N capture under fluctuating N availabilities.
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Affiliation(s)
- Xiangyu Wu
- Key Laboratory of Plant-Soil Interactions, MOE, College of Resources and Environmental Sciences, National Academy of Agriculture Green Development, China Agricultural University, No. 2 Yuanmingyuan West Road, Haidian District, Beijing 100193, China
| | - Xiaoxiao Xie
- Key Laboratory of Plant-Soil Interactions, MOE, College of Resources and Environmental Sciences, National Academy of Agriculture Green Development, China Agricultural University, No. 2 Yuanmingyuan West Road, Haidian District, Beijing 100193, China
| | - Shan Yang
- Key Laboratory of Plant-Soil Interactions, MOE, College of Resources and Environmental Sciences, National Academy of Agriculture Green Development, China Agricultural University, No. 2 Yuanmingyuan West Road, Haidian District, Beijing 100193, China
| | - Qianyu Yin
- Key Laboratory of Plant-Soil Interactions, MOE, College of Resources and Environmental Sciences, National Academy of Agriculture Green Development, China Agricultural University, No. 2 Yuanmingyuan West Road, Haidian District, Beijing 100193, China
| | - Huairong Cao
- Key Laboratory of Plant-Soil Interactions, MOE, College of Resources and Environmental Sciences, National Academy of Agriculture Green Development, China Agricultural University, No. 2 Yuanmingyuan West Road, Haidian District, Beijing 100193, China
| | - Xiaonan Dong
- Key Laboratory of Plant-Soil Interactions, MOE, College of Resources and Environmental Sciences, National Academy of Agriculture Green Development, China Agricultural University, No. 2 Yuanmingyuan West Road, Haidian District, Beijing 100193, China
| | - Jing Hui
- Key Laboratory of Plant-Soil Interactions, MOE, College of Resources and Environmental Sciences, National Academy of Agriculture Green Development, China Agricultural University, No. 2 Yuanmingyuan West Road, Haidian District, Beijing 100193, China
| | - Zhi Liu
- Key Laboratory of Plant-Soil Interactions, MOE, College of Resources and Environmental Sciences, National Academy of Agriculture Green Development, China Agricultural University, No. 2 Yuanmingyuan West Road, Haidian District, Beijing 100193, China
| | - Zhongtao Jia
- Key Laboratory of Plant-Soil Interactions, MOE, College of Resources and Environmental Sciences, National Academy of Agriculture Green Development, China Agricultural University, No. 2 Yuanmingyuan West Road, Haidian District, Beijing 100193, China
| | - Chuanzao Mao
- State Key Laboratory of Plant Physiology and Biochemistry, College of Life Sciences, Zhejiang University, No. 866 Yuhangtang Road, Xihu District, Hangzhou City, Zhejiang Province 310058, China
| | - Lixing Yuan
- Key Laboratory of Plant-Soil Interactions, MOE, College of Resources and Environmental Sciences, National Academy of Agriculture Green Development, China Agricultural University, No. 2 Yuanmingyuan West Road, Haidian District, Beijing 100193, China
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47
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Smoczynska A, Pacak A, Grabowska A, Bielewicz D, Zadworny M, Singh K, Dolata J, Bajczyk M, Nuc P, Kesy J, Wozniak M, Ratajczak I, Harwood W, Karlowski WM, Jarmolowski A, Szweykowska-Kulinska Z. Excess nitrogen responsive HvMADS27 transcription factor controls barley root architecture by regulating abscisic acid level. FRONTIERS IN PLANT SCIENCE 2022; 13:950796. [PMID: 36172555 PMCID: PMC9511987 DOI: 10.3389/fpls.2022.950796] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/23/2022] [Accepted: 07/15/2022] [Indexed: 06/01/2023]
Abstract
Nitrogen (N) is an important element for plant growth and development. Although several studies have examined plants' response to N deficiency, studies on plants' response to excess N, which is common in fertilizer-based agrosystems, are limited. Therefore, the aim of this study was to examine the response of barley to excess N conditions, specifically the root response. Additionally, genomic mechanism of excess N response in barley was elucidated using transcriptomic technologies. The results of the study showed that barley MADS27 transcription factor was mainly expressed in the roots and its gene contained N-responsive cis-regulatory elements in the promoter region. Additionally, there was a significant decrease in HvMADS27 expression under excess N condition; however, its expression was not significantly affected under low N condition. Phenotypic analysis of the root system of HvMADS27 knockdown and overexpressing barley plants revealed that HvMADS27 regulates barley root architecture under excess N stress. Further analysis of wild-type (WT) and transgenic barley plants (hvmads27 kd and hvmads27 c-Myc OE) revealed that HvMADS27 regulates the expression of HvBG1 β-glucosidase, which in turn regulates abscisic acid (ABA) level in roots. Overall, the findings of this study showed that HvMADS27 expression is downregulated in barley roots under excess N stress, which induces HvBG1 expression, leading to the release of ABA from ABA-glucose conjugate, and consequent shortening of the roots.
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Affiliation(s)
- Aleksandra Smoczynska
- Department of Gene Expression, Institute of Molecular Biology and Biotechnology, Faculty of Biology, Adam Mickiewicz University, Poznań, Poland
| | - Andrzej Pacak
- Department of Gene Expression, Institute of Molecular Biology and Biotechnology, Faculty of Biology, Adam Mickiewicz University, Poznań, Poland
| | - Aleksandra Grabowska
- Department of Gene Expression, Institute of Molecular Biology and Biotechnology, Faculty of Biology, Adam Mickiewicz University, Poznań, Poland
| | - Dawid Bielewicz
- Department of Gene Expression, Institute of Molecular Biology and Biotechnology, Faculty of Biology, Adam Mickiewicz University, Poznań, Poland
- Center for Advanced Technology, Adam Mickiewicz University, Poznań, Poland
| | - Marcin Zadworny
- Institute of Dendrology, Polish Academy of Sciences, Kórnik, Poland
| | - Kashmir Singh
- Department of Biotechnology, Panjab University, Chandigarh, India
| | - Jakub Dolata
- Department of Gene Expression, Institute of Molecular Biology and Biotechnology, Faculty of Biology, Adam Mickiewicz University, Poznań, Poland
| | - Mateusz Bajczyk
- Department of Gene Expression, Institute of Molecular Biology and Biotechnology, Faculty of Biology, Adam Mickiewicz University, Poznań, Poland
| | - Przemyslaw Nuc
- Department of Gene Expression, Institute of Molecular Biology and Biotechnology, Faculty of Biology, Adam Mickiewicz University, Poznań, Poland
| | - Jacek Kesy
- Institute of Biology, Faculty of Biological and Veterinary Sciences, Nicolaus Copernicus University, Toruń, Poland
| | - Magdalena Wozniak
- Department of Chemistry, Faculty of Forestry and Wood Technology, Poznan University of Life Sciences, Poznań, Poland
| | - Izabela Ratajczak
- Department of Chemistry, Faculty of Forestry and Wood Technology, Poznan University of Life Sciences, Poznań, Poland
| | - Wendy Harwood
- Department of Crop Genetics, John Innes Centre, Norwich Research Park, Norfolk, United Kingdom
| | - Wojciech M. Karlowski
- Department of Computational Biology, Institute of Molecular Biology and Biotechnology, Adam Mickiewicz University, Poznań, Poland
| | - Artur Jarmolowski
- Department of Gene Expression, Institute of Molecular Biology and Biotechnology, Faculty of Biology, Adam Mickiewicz University, Poznań, Poland
| | - Zofia Szweykowska-Kulinska
- Department of Gene Expression, Institute of Molecular Biology and Biotechnology, Faculty of Biology, Adam Mickiewicz University, Poznań, Poland
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Encinas‐Valero M, Esteban R, Hereş A, Vivas M, Fakhet D, Aranjuelo I, Solla A, Moreno G, Curiel Yuste J. Holm oak decline is determined by shifts in fine root phenotypic plasticity in response to belowground stress. THE NEW PHYTOLOGIST 2022; 235:2237-2251. [PMID: 35491749 PMCID: PMC9541754 DOI: 10.1111/nph.18182] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/27/2022] [Accepted: 04/20/2022] [Indexed: 06/14/2023]
Abstract
Climate change and pathogen outbreaks are the two major causes of decline in Mediterranean holm oak trees (Quercus ilex L. subsp. ballota (Desf.) Samp.). Crown-level changes in response to these stressful conditions have been widely documented but the responses of the root systems remain unexplored. The effects of environmental stress over roots and its potential role during the declining process need to be evaluated. We aimed to study how key morphological and architectural root parameters and nonstructural carbohydrates of roots are affected along a holm oak health gradient (i.e. within healthy, susceptible and declining trees). Holm oaks with different health statuses had different soil resource-uptake strategies. While healthy and susceptible trees showed a conservative resource-uptake strategy independently of soil nutrient availability, declining trees optimized soil resource acquisition by increasing the phenotypic plasticity of their fine root system. This increase in fine root phenotypic plasticity in declining holm oaks represents an energy-consuming strategy promoted to cope with the stress and at the expense of foliage maintenance. Our study describes a potential feedback loop resulting from strong unprecedented belowground stress that ultimately may lead to poor adaptation and tree death in the Spanish dehesa.
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Affiliation(s)
- Manuel Encinas‐Valero
- BC3‐Basque Centre for Climate ChangeScientific Campus of the University of the Basque CountryB/Sarriena s/n48940LeioaBizkaiaSpain
| | - Raquel Esteban
- Department of Plant Biology and EcologyUniversity of Basque Country (UPV/EHU)B/Sarriena s/n48940LeioaBizkaiaSpain
| | - Ana‐Maria Hereş
- BC3‐Basque Centre for Climate ChangeScientific Campus of the University of the Basque CountryB/Sarriena s/n48940LeioaBizkaiaSpain
- Department of Forest SciencesTransilvania University of BraşovSirul Beethoven‐1500123BraşovRomania
| | - María Vivas
- Faculty of ForestryInstitute for Dehesa Research (INDEHESA)Universidad de ExtremaduraAvenida Virgen del Puerto 210600PlasenciaCáceresSpain
| | - Dorra Fakhet
- Instituto de Agrobiotecnología (IdAB)Consejo Superior de Investigaciones Científicas (CSIC)‐Gobierno de NavarraAvenida Pamplona 12331192MutilvaSpain
| | - Iker Aranjuelo
- Instituto de Agrobiotecnología (IdAB)Consejo Superior de Investigaciones Científicas (CSIC)‐Gobierno de NavarraAvenida Pamplona 12331192MutilvaSpain
| | - Alejandro Solla
- Faculty of ForestryInstitute for Dehesa Research (INDEHESA)Universidad de ExtremaduraAvenida Virgen del Puerto 210600PlasenciaCáceresSpain
| | - Gerardo Moreno
- Faculty of ForestryInstitute for Dehesa Research (INDEHESA)Universidad de ExtremaduraAvenida Virgen del Puerto 210600PlasenciaCáceresSpain
| | - Jorge Curiel Yuste
- BC3‐Basque Centre for Climate ChangeScientific Campus of the University of the Basque CountryB/Sarriena s/n48940LeioaBizkaiaSpain
- IKERBASQUE – Basque Foundation for SciencePlaza Euskadi 5E‐48009BilbaoBizkaiaSpain
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49
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Parise AG, de Toledo GRA, Oliveira TFDC, Souza GM, Castiello U, Gagliano M, Marder M. Do plants pay attention? A possible phenomenological-empirical approach. PROGRESS IN BIOPHYSICS AND MOLECULAR BIOLOGY 2022; 173:11-23. [PMID: 35636584 DOI: 10.1016/j.pbiomolbio.2022.05.008] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/08/2022] [Revised: 05/17/2022] [Accepted: 05/25/2022] [Indexed: 06/15/2023]
Abstract
Attention is the important ability of flexibly controlling limited cognitive resources. It ensures that organisms engage with the activities and stimuli that are relevant to their survival. Despite the cognitive capabilities of plants and their complex behavioural repertoire, the study of attention in plants has been largely neglected. In this article, we advance the hypothesis that plants are endowed with the ability of attaining attentive states. We depart from a transdisciplinary basis of philosophy, psychology, physics and plant ecophysiology to propose a framework that seeks to explain how plant attention might operate and how it could be studied empirically. In particular, the phenomenological approach seems particularly important to explain plant attention theoretically, and plant electrophysiology seems particularly suited to study it empirically. We propose the use of electrophysiological techniques as a viable way for studying it, and we revisit previous work to support our hypothesis. We conclude this essay with some remarks on future directions for the study of plant attention and its implications to botany.
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Affiliation(s)
- André Geremia Parise
- Laboratory of Plant Cognition and Electrophysiology (LACEV), Department of Botany, Institute of Biology, Federal University of Pelotas, Pelotas, RS, Brazil.
| | - Gabriel Ricardo Aguilera de Toledo
- Laboratory of Plant Cognition and Electrophysiology (LACEV), Department of Botany, Institute of Biology, Federal University of Pelotas, Pelotas, RS, Brazil
| | - Thiago Francisco de Carvalho Oliveira
- Laboratory of Plant Cognition and Electrophysiology (LACEV), Department of Botany, Institute of Biology, Federal University of Pelotas, Pelotas, RS, Brazil
| | - Gustavo Maia Souza
- Laboratory of Plant Cognition and Electrophysiology (LACEV), Department of Botany, Institute of Biology, Federal University of Pelotas, Pelotas, RS, Brazil
| | - Umberto Castiello
- Neuroscience of Movement Laboratory (NEMO), Department of General Psychology, University of Padova, Padova, Italy
| | - Monica Gagliano
- Biological Intelligence Laboratory (BI Lab), School of Environment, Science and Engineering, Southern Cross University, Lismore, NSW, Australia
| | - Michael Marder
- Ikerbasque: Basque Foundation for Science & Department of Philosophy, University of the Basque Country (UPV/EHU), Spain
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50
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Wu C, Wang X, Zhen W, Nie Y, Li Y, Yuan P, Liu Q, Guo S, Shen Z, Zheng B, Hu Z. SICKLE modulates lateral root development by promoting degradation of lariat intronic RNA. PLANT PHYSIOLOGY 2022; 190:548-561. [PMID: 35788403 PMCID: PMC9434198 DOI: 10.1093/plphys/kiac301] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/08/2022] [Accepted: 06/01/2022] [Indexed: 06/15/2023]
Abstract
Plant lateral roots (LRs) play vital roles in anchorage and uptake of water and nutrients. Here, we reveal that degradation of lariat intronic RNAs (lariRNAs) modulated by SICKLE (SIC) is required for LR development in Arabidopsis (Arabidopsis thaliana). Loss of SIC results in hyper-accumulation of lariRNAs and restricts the outgrowth of LR primordia, thereby reducing the number of emerged LRs. Decreasing accumulation of lariRNAs by over-expressing RNA debranching enzyme 1 (DBR1), a rate-limiting enzyme of lariRNA decay, restored LR defects in SIC-deficient plants. Mechanistically, SIC interacts with DBR1 and facilitates its nuclear accumulation, which is achieved through two functionally redundant regions (SIC1-244 and SIC252-319) for nuclear localization. Of the remaining amino acids in this region, six (SIC245-251) comprise a DBR1-interacting region while two (SICM246 and SICW251) are essential for DBR1-SIC interaction. Reducing lariRNAs restored microRNA (miRNA) levels and LR development in lariRNA hyper-accumulating plants, suggesting that these well-known regulators of LR development mainly function downstream of lariRNAs. Taken together, we propose that SIC acts as an enhancer of DBR1 nuclear accumulation by driving nuclear localization through direct interaction, thereby promoting lariRNA decay to fine-tune miRNA biogenesis and modulating LR development.
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Affiliation(s)
- Chengyun Wu
- State Key Laboratory of Crop Stress Adaptation and Improvement, School of Life Sciences, Henan University, Kaifeng 475004, China
- Academy for Advanced Interdisciplinary Studies, Henan University, Kaifeng 475004, China
- Sanya Institute of Henan University, Sanya 572025, China
| | - Xiaoqing Wang
- State Key Laboratory of Crop Stress Adaptation and Improvement, School of Life Sciences, Henan University, Kaifeng 475004, China
| | - Weibo Zhen
- State Key Laboratory of Crop Stress Adaptation and Improvement, School of Life Sciences, Henan University, Kaifeng 475004, China
| | - Yaqing Nie
- State Key Laboratory of Crop Stress Adaptation and Improvement, School of Life Sciences, Henan University, Kaifeng 475004, China
- College of Life Sciences, Nanjing Agricultural University, Nanjing 210095, China
| | - Yan Li
- State Key Laboratory of Crop Stress Adaptation and Improvement, School of Life Sciences, Henan University, Kaifeng 475004, China
| | - Penglai Yuan
- State Key Laboratory of Crop Stress Adaptation and Improvement, School of Life Sciences, Henan University, Kaifeng 475004, China
- College of Life Sciences, Nanjing Agricultural University, Nanjing 210095, China
| | - Qiaoqiao Liu
- State Key Laboratory of Crop Stress Adaptation and Improvement, School of Life Sciences, Henan University, Kaifeng 475004, China
| | - Siyi Guo
- State Key Laboratory of Crop Stress Adaptation and Improvement, School of Life Sciences, Henan University, Kaifeng 475004, China
| | - Zhenguo Shen
- College of Life Sciences, Nanjing Agricultural University, Nanjing 210095, China
| | - Binglian Zheng
- State Key Laboratory of Genetic Engineering, Ministry of Education Key Laboratory of Biodiversity Sciences and Ecological Engineering, Institute of Plant Biology, School of Life Sciences, Fudan University, Shanghai 200438, China
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