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Toora PK, Tuan PA, Nguyen TN, Badea A, Ayele BT. Modulation in the ratio of abscisic acid to gibberellin level determines genetic variation of seed dormancy in barley (Hordeum vulgare L.). JOURNAL OF PLANT PHYSIOLOGY 2024; 301:154301. [PMID: 38968782 DOI: 10.1016/j.jplph.2024.154301] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/16/2024] [Revised: 06/22/2024] [Accepted: 06/24/2024] [Indexed: 07/07/2024]
Abstract
Abscisic acid (ABA) and gibberellin (GA) are major regulators of seed dormancy, an adaptive trait closely associated with preharvest sprouting. This study examined transcriptional regulation of ABA and GA metabolism genes and modulation of ABA and GA levels in seeds of barley genotypes exhibiting a range of dormancy phenotype. We observed a very strong negative correlation between genetic variation in seed germination and embryonic ABA level (r = 0.85), which is regulated by transcriptional modulation of HvNCED1 and/or HvCYP707A genes. A strong positive correlation was evident between variation in seed germination and GA level (r = 0.64), mediated via transcriptional regulation of GA biosynthesis genes, HvGA20ox2 and/or HvGA3oxs, and GA catabolism genes, HvGA2ox3 and/or HvGA3ox6. Modulation of the ABA and GA levels in the genotypes led to the prevalence of ABA to GA level ratio that exhibited a very strong negative correlation (r = 0.84) with seed germination, highlighting the importance of a shift in ABA/GA ratio in determining genetic variation of dormancy in barley seeds. Our results overall show that transcriptional regulation of specific ABA and GA metabolism genes underlies genetic variation in ABA/GA ratio and seed dormancy, reflecting the potential use of these genes as molecular tools for enhancing preharvest sprouting resistance in barley.
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Affiliation(s)
- Parneet K Toora
- Department of Plant Science, 222 Agriculture Building, University of Manitoba, Winnipeg, Manitoba, Canada, R3T 2N2
| | - Pham Anh Tuan
- Department of Plant Science, 222 Agriculture Building, University of Manitoba, Winnipeg, Manitoba, Canada, R3T 2N2
| | - Tran-Nguyen Nguyen
- Department of Plant Science, 222 Agriculture Building, University of Manitoba, Winnipeg, Manitoba, Canada, R3T 2N2
| | - Ana Badea
- Brandon Research and Development Center, Agriculture and Agri-Food Canada, Brandon, Manitoba, Canada, R7A 5Y3
| | - Belay T Ayele
- Department of Plant Science, 222 Agriculture Building, University of Manitoba, Winnipeg, Manitoba, Canada, R3T 2N2.
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Mérai Z, Graeber K, Xu F, Donà M, Lalatović K, Wilhelmsson PKI, Fernandez-Pozo N, Rensing SA, Leubner-Metzger G, Mittelsten Scheid O, Dolan L. Long days induce adaptive secondary dormancy in the seeds of the Mediterranean plant Aethionema arabicum. Curr Biol 2024; 34:2893-2906.e3. [PMID: 38876102 DOI: 10.1016/j.cub.2024.05.043] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/25/2024] [Revised: 03/18/2024] [Accepted: 05/22/2024] [Indexed: 06/16/2024]
Abstract
Secondary dormancy is an adaptive trait that increases reproductive success by aligning seed germination with permissive conditions for seedling establishment. Aethionema arabicum is an annual plant and member of the Brassicaceae that grows in environments characterized by hot and dry summers. Aethionema arabicum seeds may germinate in early spring when seedling establishment is permissible. We demonstrate that long-day light regimes induce secondary dormancy in the seeds of Aethionema arabicum (CYP accession), repressing germination in summer when seedling establishment is riskier. Characterization of mutants screened for defective secondary dormancy demonstrated that RGL2 mediates repression of genes involved in gibberellin (GA) signaling. Exposure to high temperature alleviates secondary dormancy, restoring germination potential. These data are consistent with the hypothesis that long-day-induced secondary dormancy and its alleviation by high temperatures may be part of an adaptive response limiting germination to conditions permissive for seedling establishment in spring and autumn.
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Affiliation(s)
- Zsuzsanna Mérai
- Gregor Mendel Institute of Molecular Plant Biology (GMI), Austrian Academy of Sciences, Vienna Biocenter (VBC), 1030 Vienna, Austria.
| | - Kai Graeber
- Department of Biological Sciences, Royal Holloway University of London, Egham, SRY TW20 0EX, UK
| | - Fei Xu
- Gregor Mendel Institute of Molecular Plant Biology (GMI), Austrian Academy of Sciences, Vienna Biocenter (VBC), 1030 Vienna, Austria
| | - Mattia Donà
- Gregor Mendel Institute of Molecular Plant Biology (GMI), Austrian Academy of Sciences, Vienna Biocenter (VBC), 1030 Vienna, Austria
| | - Katarina Lalatović
- Gregor Mendel Institute of Molecular Plant Biology (GMI), Austrian Academy of Sciences, Vienna Biocenter (VBC), 1030 Vienna, Austria
| | - Per K I Wilhelmsson
- Plant Cell Biology, Faculty of Biology, University of Marburg, 35043 Marburg, Germany
| | - Noe Fernandez-Pozo
- Plant Cell Biology, Faculty of Biology, University of Marburg, 35043 Marburg, Germany; Institute for Mediterranean and Subtropical Horticulture "La Mayora" (IHSM-CSIC-UMA), 29010 Málaga, Spain
| | - Stefan A Rensing
- Plant Cell Biology, Faculty of Biology, University of Marburg, 35043 Marburg, Germany; Centre for Biological Signalling Studies (BIOSS), University of Freiburg, 79104 Freiburg, Germany
| | - Gerhard Leubner-Metzger
- Department of Biological Sciences, Royal Holloway University of London, Egham, SRY TW20 0EX, UK; Laboratory of Growth Regulators, Faculty of Science, Palacký University and Institute of Experimental Botany, Czech Academy of Sciences, 78371 Olomouc, Czech Republic
| | - Ortrun Mittelsten Scheid
- Gregor Mendel Institute of Molecular Plant Biology (GMI), Austrian Academy of Sciences, Vienna Biocenter (VBC), 1030 Vienna, Austria
| | - Liam Dolan
- Gregor Mendel Institute of Molecular Plant Biology (GMI), Austrian Academy of Sciences, Vienna Biocenter (VBC), 1030 Vienna, Austria
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Ahmed MIY, Gorafi YSA, Kamal NM, Balla MY, Tahir ISA, Zheng L, Kawakami N, Tsujimoto H. Mining Aegilops tauschii genetic diversity in the background of bread wheat revealed a novel QTL for seed dormancy. FRONTIERS IN PLANT SCIENCE 2023; 14:1270925. [PMID: 38107013 PMCID: PMC10723804 DOI: 10.3389/fpls.2023.1270925] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/01/2023] [Accepted: 11/14/2023] [Indexed: 12/19/2023]
Abstract
Due to the low genetic diversity in the current wheat germplasm, gene mining from wild relatives is essential to develop new wheat cultivars that are more resilient to the changing climate. Aegilops tauschii, the D-genome donor of bread wheat, is a great gene source for wheat breeding; however, identifying suitable genes from Ae. tauschii is challenging due to the different morphology and the wide intra-specific variation within the species. In this study, we developed a platform for the systematic evaluation of Ae. tauschii traits in the background of the hexaploid wheat cultivar 'Norin 61' and thus for the identification of QTLs and genes. To validate our platform, we analyzed the seed dormancy trait that confers resistance to preharvest sprouting. We used a multiple synthetic derivative (MSD) population containing a genetic diversity of 43 Ae. tauschii accessions representing the full range of the species. Our results showed that only nine accessions in the population provided seed dormancy, and KU-2039 from Afghanistan had the highest level of seed dormancy. Therefore, 166 backcross inbred lines (BILs) were developed by crossing the synthetic wheat derived from KU-2039 with 'Norin 61' as the recurrent parent. The QTL mapping revealed one novel QTL, Qsd.alrc.5D, associated with dormancy explaining 41.7% of the phenotypic variation and other five unstable QTLs, two of which have already been reported. The Qsd.alrc.5D, identified for the first time within the natural variation of wheat, would be a valuable contribution to breeding after appropriate validation. The proposed platform that used the MSD population derived from the diverse Ae. tauschii gene pool and recombinant inbred lines proved to be a valuable platform for mining new and important QTLs or alleles, such as the novel seed dormancy QTL identified here. Likewise, such a platform harboring genetic diversity from wheat wild relatives could be a useful source for mining agronomically important traits, especially in the era of climate change and the narrow genetic diversity within the current wheat germplasm.
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Affiliation(s)
| | - Yasir Serag Alnor Gorafi
- International Platform for Dryland Research and Education, Tottori University, Tottori, Japan
- Gezira Research Station, Agricultural Research Corporation (ARC), Wad-Medani, Sudan
| | - Nasrein Mohamed Kamal
- Gezira Research Station, Agricultural Research Corporation (ARC), Wad-Medani, Sudan
- Arid Land Research Center, Tottori University, Tottori, Japan
| | - Mohammed Yousif Balla
- Gezira Research Station, Agricultural Research Corporation (ARC), Wad-Medani, Sudan
- Arid Land Research Center, Tottori University, Tottori, Japan
| | - Izzat Sidahmed Ali Tahir
- Gezira Research Station, Agricultural Research Corporation (ARC), Wad-Medani, Sudan
- Arid Land Research Center, Tottori University, Tottori, Japan
| | - Lipeng Zheng
- Department of Life Sciences, School of Agriculture, Meiji University, Kawasaki, Japan
| | - Naoto Kawakami
- Department of Life Sciences, School of Agriculture, Meiji University, Kawasaki, Japan
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Silva BNP, Masetto TE, Zanzi JVS, Souza LCF. Regulation of dormancy break and germination of safflower seeds: the role of GA3, light and cold temperatures. BRAZ J BIOL 2023; 83:e270354. [PMID: 37820205 DOI: 10.1590/1519-6984.270354] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/12/2022] [Accepted: 03/27/2023] [Indexed: 10/13/2023] Open
Abstract
The safflower crop is considered a great alternative for crop rotation since drought tolerance and low production cost are attractive for its choice. However, safflower seeds show dormancy soon after dispersal from the mother plant, making it difficult to successfully establish plants using newly harvested seeds. The influence of temperature, gibberellin and light/dark on dormancy break of safflower seeds during storage were investigated. In a completely randomized design, freshly harvested seeds or stored for 100 and 200 days (paper bag, 20 °C/ 60% UR) were treated with GA3 (0 and 100 µM), at 4, 10 and 25 °C, in the presence and absence of light, during the germination test. Seeds were evaluated for germination percentage, germination speed and seedling survival after 21 days. The temperature of 10 °C, in combination with GA3 (0/100 µM), or light/dark, provided the highest seed germination results, for freshly-harvested seeds and stored seeds. Collectively, these observations indicate that dormancy was not affected by gibberellic acid (100 µM GA3) and the germination results at 21 days were significantly higher, in relation to the use of GA3, under light or dark. Recently harvested seeds could efficiently germinate at 10 °C in the dark, while seeds dry-stored at 20 °C had decreased germination percentages.
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Affiliation(s)
- B N P Silva
- Universidade Federal da Grande Dourados - UFGD, Faculdade de Ciências Agrárias, Dourados, MS, Brasil
| | - T E Masetto
- Universidade Federal da Grande Dourados - UFGD, Faculdade de Ciências Agrárias, Dourados, MS, Brasil
| | - J V S Zanzi
- Universidade Federal da Grande Dourados - UFGD, Faculdade de Ciências Agrárias, Dourados, MS, Brasil
| | - L C F Souza
- Universidade Federal da Grande Dourados - UFGD, Faculdade de Ciências Agrárias, Dourados, MS, Brasil
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Mérai Z, Xu F, Musilek A, Ackerl F, Khalil S, Soto-Jiménez LM, Lalatović K, Klose C, Tarkowská D, Turečková V, Strnad M, Mittelsten Scheid O. Phytochromes mediate germination inhibition under red, far-red, and white light in Aethionema arabicum. PLANT PHYSIOLOGY 2023; 192:1584-1602. [PMID: 36861637 PMCID: PMC10231562 DOI: 10.1093/plphys/kiad138] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/24/2022] [Revised: 11/22/2022] [Accepted: 12/19/2022] [Indexed: 06/01/2023]
Abstract
The view on the role of light during seed germination stems mainly from studies with Arabidopsis (Arabidopsis thaliana), where light is required to initiate this process. In contrast, white light is a strong inhibitor of germination in other plants, exemplified by accessions of Aethionema arabicum, another member of Brassicaceae. Their seeds respond to light with gene expression changes of key regulators converse to that of Arabidopsis, resulting in opposite hormone regulation and prevention of germination. However, the photoreceptors involved in this process in A. arabicum remain unknown. Here, we screened a mutant collection of A. arabicum and identified koy-1, a mutant that lost light inhibition of germination due to a deletion in the promoter of HEME OXYGENASE 1, the gene for a key enzyme in the biosynthesis of the phytochrome chromophore. koy-1 seeds were unresponsive to red- and far-red light and hyposensitive under white light. Comparison of hormone and gene expression between wild type and koy-1 revealed that very low light fluence stimulates germination, while high irradiance of red and far-red light is inhibitory, indicating a dual role of phytochromes in light-regulated seed germination. The mutation also affects the ratio between the 2 fruit morphs of A. arabicum, suggesting that light reception via phytochromes can fine-tune several parameters of propagation in adaptation to conditions in the habitat.
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Affiliation(s)
- Zsuzsanna Mérai
- Gregor Mendel Institute of Molecular Plant Biology (GMI), Austrian Academy of Sciences, Vienna Biocenter (VBC), Vienna 1030, Austria
| | - Fei Xu
- Gregor Mendel Institute of Molecular Plant Biology (GMI), Austrian Academy of Sciences, Vienna Biocenter (VBC), Vienna 1030, Austria
| | - Andreas Musilek
- Technical University of Vienna, TRIGA Center Atominstitut, Vienna 1020, Austria
| | - Florian Ackerl
- Gregor Mendel Institute of Molecular Plant Biology (GMI), Austrian Academy of Sciences, Vienna Biocenter (VBC), Vienna 1030, Austria
| | - Sarhan Khalil
- Gregor Mendel Institute of Molecular Plant Biology (GMI), Austrian Academy of Sciences, Vienna Biocenter (VBC), Vienna 1030, Austria
| | - Luz Mayela Soto-Jiménez
- Gregor Mendel Institute of Molecular Plant Biology (GMI), Austrian Academy of Sciences, Vienna Biocenter (VBC), Vienna 1030, Austria
| | - Katarina Lalatović
- Gregor Mendel Institute of Molecular Plant Biology (GMI), Austrian Academy of Sciences, Vienna Biocenter (VBC), Vienna 1030, Austria
| | - Cornelia Klose
- Institute of Biology II, University of Freiburg, Freiburg D-79104, Germany
| | - Danuše Tarkowská
- Laboratory of Growth Regulators, Palacký University & Institute of Experimental Botany, Czech Academy of Sciences, Olomouc CZ-78371, Czech Republic
| | - Veronika Turečková
- Laboratory of Growth Regulators, Palacký University & Institute of Experimental Botany, Czech Academy of Sciences, Olomouc CZ-78371, Czech Republic
| | - Miroslav Strnad
- Laboratory of Growth Regulators, Palacký University & Institute of Experimental Botany, Czech Academy of Sciences, Olomouc CZ-78371, Czech Republic
| | - Ortrun Mittelsten Scheid
- Gregor Mendel Institute of Molecular Plant Biology (GMI), Austrian Academy of Sciences, Vienna Biocenter (VBC), Vienna 1030, Austria
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Tarnawa Á, Kende Z, Sghaier AH, Kovács GP, Gyuricza C, Khaeim H. Effect of Abiotic Stresses from Drought, Temperature, and Density on Germination and Seedling Growth of Barley ( Hordeum vulgare L.). PLANTS (BASEL, SWITZERLAND) 2023; 12:plants12091792. [PMID: 37176849 PMCID: PMC10181215 DOI: 10.3390/plants12091792] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/03/2023] [Revised: 03/22/2023] [Accepted: 04/24/2023] [Indexed: 05/15/2023]
Abstract
Seed germination and seedling growth are highly sensitive to deficit moisture and temperature stress. This study was designed to investigate barley (Hordeum vulgare L.) seeds' germination and seedling growth under conditions of abiotic stresses. Constant temperature levels of 5, 10, 15, 20, 25, 30, and 35 °C were used for the germination test. Drought and waterlogging stresses using 30 different water levels were examined using two methods: either based at 1 milliliter intervals or, on the other hand, as percentages of thousand kernel weight (TKW). Seedling density in a petri dish and antifungal application techniques were also investigated. Temperature significantly impacted germination time and seedling development with an ideal range of 15-20 °C, with a more comprehensive range to 10 °C. Higher temperatures reversely affected germination percentage, and the lower ones affected the germination and seedling growth rate. Germination commenced at 130% water of the TKW, and the ideal water range for seedling development was greater and more extensive than the range for germination, which means there is a difference between the starting point for germination and the seedling development. Seed size define germination water requirements and provides an objective and more precise basis suggesting an optimal range supply of 720% and 1080% of TKW for barley seedling development. A total of 10 seeds per 9 cm petri dish may be preferable over greater densities. The techniques of priming seeds with an antifungal solution (Bordóilé or Hypo) or antifungal application at even 5 ppm in the media significantly prevented fungal growth. This study is novel regarding the levels and types of abiotic stresses, the crop, the experimental and measurement techniques, and in comparison to the previous studies.
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Affiliation(s)
- Ákos Tarnawa
- Institute of Agronomy, Hungarian University of Agriculture and Life Sciences, Páter Károly u.1, Gödöllő, 2100 Budapest, Hungary
| | - Zoltán Kende
- Institute of Agronomy, Hungarian University of Agriculture and Life Sciences, Páter Károly u.1, Gödöllő, 2100 Budapest, Hungary
| | - Asma Haj Sghaier
- Institute of Agronomy, Hungarian University of Agriculture and Life Sciences, Páter Károly u.1, Gödöllő, 2100 Budapest, Hungary
| | - Gergő Péter Kovács
- Institute of Agronomy, Hungarian University of Agriculture and Life Sciences, Páter Károly u.1, Gödöllő, 2100 Budapest, Hungary
| | - Csaba Gyuricza
- Institute of Agronomy, Hungarian University of Agriculture and Life Sciences, Páter Károly u.1, Gödöllő, 2100 Budapest, Hungary
| | - Hussein Khaeim
- Institute of Agronomy, Hungarian University of Agriculture and Life Sciences, Páter Károly u.1, Gödöllő, 2100 Budapest, Hungary
- Field Crop Department, College of Agriculture, University of Al-Qadisiyah, Al Diwaniyah 58002, Iraq
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Yun F, Liu H, Deng Y, Hou X, Liao W. The Role of Light-Regulated Auxin Signaling in Root Development. Int J Mol Sci 2023; 24:ijms24065253. [PMID: 36982350 PMCID: PMC10049345 DOI: 10.3390/ijms24065253] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2023] [Revised: 03/05/2023] [Accepted: 03/07/2023] [Indexed: 03/12/2023] Open
Abstract
The root is an important organ for obtaining nutrients and absorbing water and carbohydrates, and it depends on various endogenous and external environmental stimulations such as light, temperature, water, plant hormones, and metabolic constituents. Auxin, as an essential plant hormone, can mediate rooting under different light treatments. Therefore, this review focuses on summarizing the functions and mechanisms of light-regulated auxin signaling in root development. Some light-response components such as phytochromes (PHYs), cryptochromes (CRYs), phototropins (PHOTs), phytochrome-interacting factors (PIFs) and constitutive photo-morphorgenic 1 (COP1) regulate root development. Moreover, light mediates the primary root, lateral root, adventitious root, root hair, rhizoid, and seminal and crown root development via the auxin signaling transduction pathway. Additionally, the effect of light through the auxin signal on root negative phototropism, gravitropism, root greening and the root branching of plants is also illustrated. The review also summarizes diverse light target genes in response to auxin signaling during rooting. We conclude that the mechanism of light-mediated root development via auxin signaling is complex, and it mainly concerns in the differences in plant species, such as barley (Hordeum vulgare L.) and wheat (Triticum aestivum L.), changes of transcript levels and endogenous IAA content. Hence, the effect of light-involved auxin signaling on root growth and development is definitely a hot issue to explore in the horticultural studies now and in the future.
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Huang Y, Jiao Y, Yang S, Mao D, Wang F, Chen L, Liang M. SiNCED1, a 9-cis-epoxycarotenoid dioxygenase gene in Setaria italica, is involved in drought tolerance and seed germination in transgenic Arabidopsis. FRONTIERS IN PLANT SCIENCE 2023; 14:1121809. [PMID: 36968367 PMCID: PMC10034083 DOI: 10.3389/fpls.2023.1121809] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/12/2022] [Accepted: 02/24/2023] [Indexed: 06/18/2023]
Abstract
Foxtail millet (Setaria italica L.) is a vital cereal food crop with promising development and utilization potential because of its outstanding ability to resist drought stress. However, the molecular mechanisms underlying its drought stress resistance remain unclear. In this study, we aimed to elucidate the molecular function of a 9-cis-epoxycarotenoid dioxygenase gene, SiNCED1, in the drought stress response of foxtail millet. Expression pattern analysis showed that SiNCED1 expression was significantly induced by abscisic acid (ABA), osmotic stress, and salt stress. Furthermore, ectopic overexpression of SiNCED1 could enhance drought stress resistance by elevating endogenous ABA levels and promoting stomatal closure. Transcript analysis indicated that SiNCED1 modulated ABA-related stress responsive gene expression. In addition, we found that ectopic expression of SiNCED1 delayed seed germination under normal and abiotic stress conditions. Taken together, our results show that SiNCED1 plays a positive role in the drought tolerance and seed dormancy of foxtail millet by modulating ABA biosynthesis. In conclusion, this study revealed that SiNCED1 is an important candidate gene for the improvement of drought stress tolerance in foxtail millet and could be beneficial in the breeding and investigation of drought tolerance in other agronomic crops.
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Affiliation(s)
- Yuan Huang
- College of Pharmacy, Guizhou University of Traditional Chinese Medicine, Guiyang, China
- College of Life Science, Hunan Normal University, Changsha, China
| | - Yang Jiao
- College of Life Science, Hunan Normal University, Changsha, China
| | - Sha Yang
- College of Pharmacy, Guizhou University of Traditional Chinese Medicine, Guiyang, China
| | - Dandan Mao
- College of Life Science, Hunan Normal University, Changsha, China
- Hunan Province Key Laboratory of Crop Sterile Germplasm Resource Innovation and Application, College of Life Science, Hunan Normal University, Changsha, China
| | - Feng Wang
- College of Life Science, Hunan Normal University, Changsha, China
| | - Liangbi Chen
- College of Life Science, Hunan Normal University, Changsha, China
- Hunan Province Key Laboratory of Crop Sterile Germplasm Resource Innovation and Application, College of Life Science, Hunan Normal University, Changsha, China
| | - Manzhong Liang
- College of Life Science, Hunan Normal University, Changsha, China
- Hunan Province Key Laboratory of Crop Sterile Germplasm Resource Innovation and Application, College of Life Science, Hunan Normal University, Changsha, China
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9
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de Oliveira R, Alves FRR, da Rocha Prado E, Gomes LDL, Freschi L, Gaion LA, Carvalho RF. CRYPTOCHROME 1a-mediated blue light perception regulates tomato seed germination via changes in hormonal balance and endosperm-degrading hydrolase dynamics. PLANTA 2023; 257:67. [PMID: 36843173 DOI: 10.1007/s00425-023-04100-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/01/2022] [Accepted: 02/17/2023] [Indexed: 06/18/2023]
Abstract
Blue light exposure delays tomato seed germination by decreasing endosperm-degrading hydrolase activities, a process regulated by CRY1a-dependent signaling and the hormonal balance between ABA and GA. The germination of tomato seeds (Solanum lycopersicum L.) is tightly controlled by an internal hormonal balance, which is also influenced by environmental factors such as light. In this study, we investigated the blue light (BL)-mediated impacts on physiological, biochemical, and molecular processes during the germination of the blue light photoreceptor CRYPTOCHROME 1a loss-of-function mutant (cry1a) and of the hormonal tomato mutants notabilis (not, deficient in ABA) and procera (pro, displaying a GA-constitutive response). Seeds were germinated in a controlled chamber in the dark and under different intensities of continuous BL (ranging from 1 to 25 µmol m-2 s-1). In general, exposure to BL delayed tomato seed germination in a fluency rate-dependent way due to negative impacts on the activities of endosperm-degrading hydrolases, such as endo-β-mannanase, β-mannosidase, and α-galactosidase. However, not and pro mutants presented higher germination speed index (GSI) compared to WT despite the BL influence, associated with higher hydrolase activities, especially evident in pro, indicating that the ABA/GA hormonal balance is important to diminish BL inhibition over tomato germination. The cry1a germination percentage was higher than in WT in the dark but its GSI was lower under BL exposure, suggesting that functional CRY1a is required for BL-dependent germination. BL inhibits the expression of GA-biosynthetic genes, and induces GA-deactivating and ABA-biosynthetic genes. The magnitude of the BL influence over the hormone-related transcriptional profile is also dependent upon CRY1a, highlighting the complex interplay between light and hormonal pathways. These results contribute to a better understanding of BL-induced events behind the photoregulation of tomato seed germination.
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Affiliation(s)
- Reginaldo de Oliveira
- Department of Biology, São Paulo State University (UNESP), Jaboticabal, 14884-900, Brazil
| | - Frederico Rocha Rodrigues Alves
- Department of Systematics and Ecology, Center of Exact and Natural Sciences, Federal University of Paraíba, João Pessoa, PB, 58051-900, Brazil
| | | | | | - Luciano Freschi
- Department of Botany, Institute of Biosciences, University of São Paulo, São Paulo, Brazil
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Su SH, Levine HG, Masson PH. Brachypodium distachyon Seedlings Display Accession-Specific Morphological and Transcriptomic Responses to the Microgravity Environment of the International Space Station. Life (Basel) 2023; 13:life13030626. [PMID: 36983782 PMCID: PMC10058394 DOI: 10.3390/life13030626] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/28/2022] [Revised: 02/06/2023] [Accepted: 02/16/2023] [Indexed: 03/06/2023] Open
Abstract
Plants have been recognized as key components of bioregenerative life support systems for space exploration, and many experiments have been carried out to evaluate their adaptability to spaceflight. Unfortunately, few of these experiments have involved monocot plants, which constitute most of the crops used on Earth as sources of food, feed, and fiber. To better understand the ability of monocot plants to adapt to spaceflight, we germinated and grew Brachypodium distachyon seedlings of the Bd21, Bd21-3, and Gaz8 accessions in a customized growth unit on the International Space Station, along with 1-g ground controls. At the end of a 4-day growth period, seedling organ’s growth and morphologies were quantified, and root and shoot transcriptomic profiles were investigated using RNA-seq. The roots of all three accessions grew more slowly and displayed longer root hairs under microgravity conditions relative to ground control. On the other hand, the shoots of Bd21-3 and Gaz-8 grew at similar rates between conditions, whereas those of Bd21 grew more slowly under microgravity. The three Brachypodium accessions displayed dramatically different transcriptomic responses to microgravity relative to ground controls, with the largest numbers of differentially expressed genes (DEGs) found in Gaz8 (4527), followed by Bd21 (1353) and Bd21-3 (570). Only 47 and six DEGs were shared between accessions for shoots and roots, respectively, including DEGs encoding wall-associated proteins and photosynthesis-related DEGs. Furthermore, DEGs associated with the “Oxidative Stress Response” GO group were up-regulated in the shoots and down-regulated in the roots of Bd21 and Gaz8, indicating that Brachypodium roots and shoots deploy distinct biological strategies to adapt to the microgravity environment. A comparative analysis of the Brachypodium oxidative-stress response DEGs with the Arabidopsis ROS wheel suggests a connection between retrograde signaling, light response, and decreased expression of photosynthesis-related genes in microgravity-exposed shoots. In Gaz8, DEGs were also found to preferentially associate with the “Plant Hormonal Signaling” and “MAP Kinase Signaling” KEGG pathways. Overall, these data indicate that Brachypodium distachyon seedlings exposed to the microgravity environment of ISS display accession- and organ-specific responses that involve oxidative stress response, wall remodeling, photosynthesis inhibition, expression regulation, ribosome biogenesis, and post-translational modifications. The general characteristics of these responses are similar to those displayed by microgravity-exposed Arabidopsis thaliana seedlings. However, organ- and accession-specific components of the response dramatically differ both within and between species. These results suggest a need to directly evaluate candidate-crop responses to microgravity to better understand their specific adaptability to this novel environment and develop cultivation strategies allowing them to strive during spaceflight.
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Affiliation(s)
- Shih-Heng Su
- Laboratory of Genetics, University of Wisconsin-Madison, 425 G Henry Mall, Madison, WI 53706, USA
- Correspondence: (S.-H.S.); (P.H.M.)
| | - Howard G. Levine
- NASA John F. Kennedy Space Center, Kennedy Space Center, Merritt Island, FL 32899, USA
| | - Patrick H. Masson
- Laboratory of Genetics, University of Wisconsin-Madison, 425 G Henry Mall, Madison, WI 53706, USA
- Correspondence: (S.-H.S.); (P.H.M.)
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11
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Influence of Light of Different Spectral Compositions on Growth Parameters, Photosynthetic Pigment Contents and Gene Expression in Scots Pine Plantlets. Int J Mol Sci 2023; 24:ijms24032063. [PMID: 36768383 PMCID: PMC9917036 DOI: 10.3390/ijms24032063] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/05/2022] [Revised: 12/30/2022] [Accepted: 01/18/2023] [Indexed: 01/21/2023] Open
Abstract
The photoreceptors of red light (phytochromes) and blue light (cryptochromes) impact plant growth and metabolism. However, their action has been barely studied, especially in coniferous plants. Therefore, the influence of blue (maximum 450 nm), red (maximum 660 nm), white light (maxima 450 nm + 575 nm), far-red light (maximum 730 nm), white fluorescent light and dark on seed germination, growth, chlorophyll and carotenoid contents, as well as the transcript levels of genes involved in reception, photosynthesis, light and hormonal signaling of Scots pine plantlets, was investigated. The highest values of dry weight, root length and photosynthetic pigment contents were characteristic of 9-day-old plantlets grown under red light, whereas in the dark plantlet length, seed vigor, seed germination, dry weight and pigment contents were decreased. Under blue and white lights, the main studied morphological parameters were decreased or close to red light. The cotyledons were undeveloped under dark conditions, likely due to the reduced content of photosynthetic pigments, which agrees with the low transcript levels of genes encoding protochlorophyllide oxidoreductase (PORA) and phytoene synthase (PSY). The transcript levels of a number of genes involved in phytohormone biosynthesis and signaling, such as GA3ox, RRa, KAO and JazA, were enhanced under red light, unlike under dark conditions. We suggest that the observed phenomena of red light are the most important for the germination of the plantlets and may be based on earlier and enhanced expression of auxin, cytokinin, gibberellin and jasmonate signaling genes activated by corresponding photoreceptors. The obtained results may help to improve reforestation technology; however, this problem needs further study.
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12
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Rehal PK, Tuan PA, Nguyen TN, Cattani DJ, Humphreys DG, Ayele BT. Genetic variation of seed dormancy in wheat (Triticum aestivum L.) is mediated by transcriptional regulation of abscisic acid metabolism and signaling. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2022; 324:111432. [PMID: 36029895 DOI: 10.1016/j.plantsci.2022.111432] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/18/2022] [Revised: 08/09/2022] [Accepted: 08/20/2022] [Indexed: 06/15/2023]
Abstract
Abscisic acid (ABA) regulates seed dormancy and therefore preharvest sprouting (PHS) in wheat. This study investigated the contribution of transcriptional regulation of ABA metabolism and signaling genes to genetic variation in dormancy of wheat seeds. Our results showed that genetic variation in seed dormancy is highly correlated with ABA content (r > 0.86), which, in turn, was closely associated with the expression levels of ABA biosynthesis genes, TaNCED1 (r = 0.78) and TaNCED2 (r = 0.67). A relatively lower correlation was observed between ABA content and the expression levels of ABA catabolism genes, TaCYP707A1 (r = 0.51) and TaCYP707A2 (r = 0.57). The expression level of TaABI5 exhibited strong associations with the levels of ABA (r = 0.8) and seed dormancy (r > 0.9), indicating the importance of seed ABA sensitivity in mediating genetic variation in dormancy. Furthermore, high positive correlations were prevalent between the expression patterns of TaABI5 and TaNCED1 (r = 0.91) or TaNCED2 (r = 0.82). Overall, our results implicated the significance of TaNCEDs and TaABI5 in regulating genetic variation in ABA level and sensitivity and thereby seed dormancy, highlighting the potential use of these genes to develop molecular markers for incorporating PHS resistance in wheat.
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Affiliation(s)
- Pawanpuneet K Rehal
- Department of Plant Science, University of Manitoba, 222 Agriculture Building, Winnipeg, Manitoba R3T 2N2, Canada
| | - Pham Anh Tuan
- Department of Plant Science, University of Manitoba, 222 Agriculture Building, Winnipeg, Manitoba R3T 2N2, Canada
| | - Tran-Nguyen Nguyen
- Department of Plant Science, University of Manitoba, 222 Agriculture Building, Winnipeg, Manitoba R3T 2N2, Canada
| | - Douglas J Cattani
- Department of Plant Science, University of Manitoba, 222 Agriculture Building, Winnipeg, Manitoba R3T 2N2, Canada
| | - D Gavin Humphreys
- Ottawa Research and Development Center, Agriculture and Agri-Food Canada, KW Neatby Building, 960 Carling Avenue, Ottawa, Ontario K1A 0C6, Canada
| | - Belay T Ayele
- Department of Plant Science, University of Manitoba, 222 Agriculture Building, Winnipeg, Manitoba R3T 2N2, Canada.
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13
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Vitale E, Izzo LG, Amitrano C, Velikova V, Tsonev T, Simoniello P, De Micco V, Arena C. Light Quality Modulates Photosynthesis and Antioxidant Properties of B. vulgaris L. Plants from Seeds Irradiated with High-Energy Heavy Ions: Implications for Cultivation in Space. PLANTS (BASEL, SWITZERLAND) 2022; 11:1816. [PMID: 35890451 PMCID: PMC9316636 DOI: 10.3390/plants11141816] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/24/2022] [Revised: 07/06/2022] [Accepted: 07/07/2022] [Indexed: 11/17/2022]
Abstract
Beta vulgaris L. is a crop selected for cultivation in Space for its nutritional properties. However, exposure to ionizing radiation (IR) can alter plant photosynthetic performance and phytochemical production in the extraterrestrial environment. This study investigated if plant growth under different light quality regimes (FL-white fluorescent; RGB-red-green-blue; RB-red-blue) modifies the photosynthetic behavior and bioactive compound synthesis of plants sprouted by dry seeds irradiated with carbon or titanium high-energy ions. The study evidenced that: (i) the plant response depends on the type of heavyion; (ii) control and C-ion-irradiated plants were similar for photosynthetic pigment content and PSII photochemical efficiency, regardless of the LQ regime; (iii) under FL, net photosynthesis (AN) and water use efficiency (iWUE) declined in C- and Ti-ion plants compared to control, while the growth of irradiated plants under RGB and RB regimes offset these differences; (iv) the interaction Ti-ion× RB improved iWUE, and stimulated the production of pigments, carbohydrates, and antioxidants. The overall results highlighted that the cultivation of irradiated plants under specific LQ regimes effectively regulates photosynthesis and bioactive compound amounts in leaf edible tissues. In particular, the interaction Ti-ion × RB improved iWUE and increased pigments, carbohydrates, and antioxidant content.
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Affiliation(s)
- Ermenegilda Vitale
- Department of Biology, University of Naples Federico II, Via Cinthia, 80126 Naples, Italy;
- Department of Agricultural Sciences, University of Naples Federico II, Via Università 100, 80055 Portici, Italy; (L.G.I.); (C.A.); (V.D.M.)
| | - Luigi Gennaro Izzo
- Department of Agricultural Sciences, University of Naples Federico II, Via Università 100, 80055 Portici, Italy; (L.G.I.); (C.A.); (V.D.M.)
| | - Chiara Amitrano
- Department of Agricultural Sciences, University of Naples Federico II, Via Università 100, 80055 Portici, Italy; (L.G.I.); (C.A.); (V.D.M.)
| | - Violeta Velikova
- Institute of Plant Physiology and Genetics, Bulgarian Academy of Sciences, Acad. G. Bonchev Str., bl. 21, 1113 Sofia, Bulgaria; (V.V.); (T.T.)
| | - Tsonko Tsonev
- Institute of Plant Physiology and Genetics, Bulgarian Academy of Sciences, Acad. G. Bonchev Str., bl. 21, 1113 Sofia, Bulgaria; (V.V.); (T.T.)
| | - Palma Simoniello
- Department of Science and Technology, Parthenope University of Naples, Via Acton 38, 80133 Naples, Italy;
| | - Veronica De Micco
- Department of Agricultural Sciences, University of Naples Federico II, Via Università 100, 80055 Portici, Italy; (L.G.I.); (C.A.); (V.D.M.)
| | - Carmen Arena
- Department of Biology, University of Naples Federico II, Via Cinthia, 80126 Naples, Italy;
- BAT Center—Center for Studies on Bioinspired Agro-Environmental Technology, 80055 Portici, Italy
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14
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Bączek-Kwinta R. An Interplay of Light and Smoke Compounds in Photoblastic Seeds. PLANTS (BASEL, SWITZERLAND) 2022; 11:1773. [PMID: 35807725 PMCID: PMC9269607 DOI: 10.3390/plants11131773] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/19/2022] [Revised: 06/28/2022] [Accepted: 06/28/2022] [Indexed: 11/17/2022]
Abstract
Light increases the germinability of positively photoblastic seeds and inhibits the germination of negative ones. In an area where plant-generated smoke from fire is a periodically occurring environmental factor, smoke chemicals can affect the germination of seeds, including those that are photoblastically sensitive. Moreover, as smoke and its compounds, mostly karrikin 1, KAR1, have been used for priming the seeds of many species, including photoblastic ones, a systematic review of papers dealing with the phenomenon was conducted. The review indicates that the unification of experimental treatments (light spectrum, intensity and photoperiod, and KAR1 concentration within the species) could improve the quality of global research on the impact of smoke chemicals on photoblastic seeds, also at the molecular level. The review also reveals that the physiologically active concentration of KAR1 varies in different species. Moreover, the physiological window of KAR's impact on germination can be narrow due to different depths of primary seed dormancy. Another concern is the mode of action of different smoke sources and formulations (aerosol smoke, smoke-saturated water), or pure smoke chemicals. The reason for this concern is the additive or synergetic effect of KARs, cyanohydrins, nitrates and other compounds, and the presence of a germination inhibitor, trimethylbutenolide (TMB) in smoke and its formulations. Obviously, environmental factors that are characteristic of the local environment need to be considered. From a practical perspective, seeds germinating faster in response to smoke chemicals can outcompete other seeds. Hence, a thorough understanding of this phenomenon can be useful in the restoration of plant habitats and the protection of rare species, as well as yielding an improvement in plants that are sown directly to the field. On the other hand, the application of smoke compounds can induce "suicidal germination" in the photoblastic seeds that are buried in the soil and deplete the soil seed bank of the local population of unwanted species.
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Affiliation(s)
- Renata Bączek-Kwinta
- Department of Plant Physiology, Breeding and Seed Science, Faculty of Agriculture and Economics, University of Agriculture in Krakow, Podłużna 3, 30-239 Kraków, Poland
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15
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The Effect of Temperature and Water Stresses on Seed Germination and Seedling Growth of Wheat (Triticum aestivum L.). SUSTAINABILITY 2022. [DOI: 10.3390/su14073887] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
Abstract
Temperature and moisture are essential factors in germination and seedling growth. The purpose of this research was to assess the germination and growth of wheat (Triticum aestivum L.) seeds under various abiotic stressors. It was conducted in the Agronomy Institute of the Hungarian University of Agriculture and Life Sciences, Gödöllő, Hungary. Six distinct temperature levels were used: 5, 10, 15, 20, 25, and 30 °C. Stresses of drought and waterlogging were quantified using 25 water levels based on single-milliliter intervals and as a percentage based on thousand kernel weight (TKW). Seedling density was also tested. Temperature significantly influenced germination duration and seedling development. 20 °C was ideal with optimal range of 15 °C to less than 25 °C. Germination occurred at water amount of 75% of the TKW, and its ideal range was lower and narrower than the range for seedling development. Seed size provided an objective basis for defining germination water requirements. The current study established an optimal water supply range for wheat seedling growth of 525–825 percent of the TKW. Fifteen seeds within a 9 cm Petri dish may be preferred to denser populations.
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16
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Ali F, Qanmber G, Li F, Wang Z. Updated role of ABA in seed maturation, dormancy, and germination. J Adv Res 2022; 35:199-214. [PMID: 35003801 PMCID: PMC8721241 DOI: 10.1016/j.jare.2021.03.011] [Citation(s) in RCA: 80] [Impact Index Per Article: 40.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/25/2020] [Revised: 03/03/2021] [Accepted: 03/27/2021] [Indexed: 12/17/2022] Open
Abstract
Functional ABA biosynthesis genes show specific roles for ABA accumulation at different stages of seed development and seedling establishment. De novo ABA biosynthesis during embryogenesis is required for late seed development, maturation, and induction of primary dormancy. ABA plays multiple roles with the key LAFL hub to regulate various downstream signaling genes in seed and seedling development. Key ABA signaling genes ABI3, ABI4, and ABI5 play important multiple functions with various cofactors during seed development such as de-greening, desiccation tolerance, maturation, dormancy, and seed vigor. The crosstalk between ABA and other phytohormones are complicated and important for seed development and seedling establishment.
Background Seed is vital for plant survival and dispersion, however, its development and germination are influenced by various internal and external factors. Abscisic acid (ABA) is one of the most important phytohormones that influence seed development and germination. Until now, impressive progresses in ABA metabolism and signaling pathways during seed development and germination have been achieved. At the molecular level, ABA biosynthesis, degradation, and signaling genes were identified to play important roles in seed development and germination. Additionally, the crosstalk between ABA and other hormones such as gibberellins (GA), ethylene (ET), Brassinolide (BR), and auxin also play critical roles. Although these studies explored some actions and mechanisms by which ABA-related factors regulate seed morphogenesis, dormancy, and germination, the complete network of ABA in seed traits is still unclear. Aim of review Presently, seed faces challenges in survival and viability. Due to the vital positive roles in dormancy induction and maintenance, as well as a vibrant negative role in the seed germination of ABA, there is a need to understand the mechanisms of various ABA regulators that are involved in seed dormancy and germination with the updated knowledge and draw a better network for the underlying mechanisms of the ABA, which would advance the understanding and artificial modification of the seed vigor and longevity regulation. Key scientific concept of review Here, we review functions and mechanisms of ABA in different seed development stages and seed germination, discuss the current progresses especially on the crosstalk between ABA and other hormones and signaling molecules, address novel points and key challenges (e.g., exploring more regulators, more cofactors involved in the crosstalk between ABA and other phytohormones, and visualization of active ABA in the plant), and outline future perspectives for ABA regulating seed associated traits.
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Affiliation(s)
- Faiza Ali
- Zhengzhou Research Base, State Key Laboratory of Cotton Biology, Zhengzhou University, Zhengzhou 450001, China
| | - Ghulam Qanmber
- Zhengzhou Research Base, State Key Laboratory of Cotton Biology, Zhengzhou University, Zhengzhou 450001, China
| | - Fuguang Li
- Zhengzhou Research Base, State Key Laboratory of Cotton Biology, Zhengzhou University, Zhengzhou 450001, China.,State Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang 455000, China
| | - Zhi Wang
- Zhengzhou Research Base, State Key Laboratory of Cotton Biology, Zhengzhou University, Zhengzhou 450001, China.,State Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang 455000, China
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17
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Li P, Zheng T, Zhang Z, Liu W, Qiu L, Wang J, Cheng T, Zhang Q. Integrative Identification of Crucial Genes Associated With Plant Hormone-Mediated Bud Dormancy in Prunus mume. Front Genet 2021; 12:698598. [PMID: 34295354 PMCID: PMC8290171 DOI: 10.3389/fgene.2021.698598] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/21/2021] [Accepted: 06/07/2021] [Indexed: 12/13/2022] Open
Abstract
Prunus mume is an important ornamental woody plant with winter-flowering property, which is closely related to bud dormancy. Despite recent scientific headway in deciphering the mechanism of bud dormancy in P. mume, the overall picture of gene co-expression regulating P. mume bud dormancy is still unclear. Here a total of 23 modules were screened by weighted gene co-expression network analysis (WGCNA), of which 12 modules were significantly associated with heteroauxin, abscisic acid (ABA), and gibberellin (GA), including GA1, GA3, and GA4. The yellow module, which was positively correlated with the content of ABA and negatively correlated with the content of GA, was composed of 1,426 genes, among which 156 transcription factors (TFs) were annotated with transcriptional regulation function. An enrichment analysis revealed that these genes are related to the dormancy process and plant hormone signal transduction. Interestingly, the expression trends of PmABF2 and PmABF4 genes, the core members of ABA signal transduction, were positively correlated with P. mume bud dormancy. Additionally, the PmSVP gene had attracted lots of attention because of its co-expression, function enrichment, and expression level. PmABF2, PmABF4, and PmSVP were the genes with a high degree of expression in the co-expression network, which was upregulated by ABA treatment. Our results provide insights into the underlying molecular mechanism of plant hormone-regulated dormancy and screen the hub genes involved in bud dormancy in P. mume.
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Affiliation(s)
- Ping Li
- Beijing Key Laboratory of Ornamental Plants Germplasm Innovation & Molecular Breeding; National Engineering Research Center for Floriculture; Beijing Laboratory of Urban and Rural Ecological Environment; Engineering Research Center of Landscape Environment of Ministry of Education; Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants of Ministry of Education, Beijing Forestry University, Beijing, China.,School of Landscape Architecture, Beijing Forestry University, Beijing, China
| | - Tangchun Zheng
- Beijing Key Laboratory of Ornamental Plants Germplasm Innovation & Molecular Breeding; National Engineering Research Center for Floriculture; Beijing Laboratory of Urban and Rural Ecological Environment; Engineering Research Center of Landscape Environment of Ministry of Education; Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants of Ministry of Education, Beijing Forestry University, Beijing, China.,School of Landscape Architecture, Beijing Forestry University, Beijing, China
| | - Zhiyong Zhang
- Department of Hematology, The Second Affiliated Hospital, Guangzhou Medical University, Guangzhou, China
| | - Weichao Liu
- Beijing Key Laboratory of Ornamental Plants Germplasm Innovation & Molecular Breeding; National Engineering Research Center for Floriculture; Beijing Laboratory of Urban and Rural Ecological Environment; Engineering Research Center of Landscape Environment of Ministry of Education; Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants of Ministry of Education, Beijing Forestry University, Beijing, China.,School of Landscape Architecture, Beijing Forestry University, Beijing, China
| | - Like Qiu
- Beijing Key Laboratory of Ornamental Plants Germplasm Innovation & Molecular Breeding; National Engineering Research Center for Floriculture; Beijing Laboratory of Urban and Rural Ecological Environment; Engineering Research Center of Landscape Environment of Ministry of Education; Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants of Ministry of Education, Beijing Forestry University, Beijing, China.,School of Landscape Architecture, Beijing Forestry University, Beijing, China
| | - Jia Wang
- Beijing Key Laboratory of Ornamental Plants Germplasm Innovation & Molecular Breeding; National Engineering Research Center for Floriculture; Beijing Laboratory of Urban and Rural Ecological Environment; Engineering Research Center of Landscape Environment of Ministry of Education; Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants of Ministry of Education, Beijing Forestry University, Beijing, China.,School of Landscape Architecture, Beijing Forestry University, Beijing, China
| | - Tangren Cheng
- Beijing Key Laboratory of Ornamental Plants Germplasm Innovation & Molecular Breeding; National Engineering Research Center for Floriculture; Beijing Laboratory of Urban and Rural Ecological Environment; Engineering Research Center of Landscape Environment of Ministry of Education; Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants of Ministry of Education, Beijing Forestry University, Beijing, China.,School of Landscape Architecture, Beijing Forestry University, Beijing, China
| | - Qixiang Zhang
- Beijing Key Laboratory of Ornamental Plants Germplasm Innovation & Molecular Breeding; National Engineering Research Center for Floriculture; Beijing Laboratory of Urban and Rural Ecological Environment; Engineering Research Center of Landscape Environment of Ministry of Education; Key Laboratory of Genetics and Breeding in Forest Trees and Ornamental Plants of Ministry of Education, Beijing Forestry University, Beijing, China.,School of Landscape Architecture, Beijing Forestry University, Beijing, China
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18
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Gómez-Maqueo X, Figueroa-Corona L, Martínez-Villegas JA, Soriano D, Gamboa-deBuen A. The Relevance of a Physiological-Stage Approach Study of the Molecular and Environmental Factors Regulating Seed Germination in Wild Plants. PLANTS 2021; 10:plants10061084. [PMID: 34071163 PMCID: PMC8226667 DOI: 10.3390/plants10061084] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/29/2021] [Revised: 05/21/2021] [Accepted: 05/24/2021] [Indexed: 11/16/2022]
Abstract
Germination represents the culmination of the seed developmental program and is affected by the conditions prevailing during seed maturation in the mother plant. During maturation, the dormancy condition and tolerance to dehydration are established. These characteristics are modulated by the environment to which they are subjected, having an important impact on wild species. In this work, a review was made of the molecular bases of the maturation, the processes of dormancy imposition and loss, as well as the germination process in different wild species with different life histories, and from diverse habitats. It is also specified which of these species present a certain type of management. The impact that the domestication process has had on certain characteristics of the seed is discussed, as well as the importance of determining physiological stages based on morphological characteristics, to face the complexities of the study of these species and preserve their genetic diversity and physiological responses.
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Affiliation(s)
- Ximena Gómez-Maqueo
- Instituto de Ecología, Universidad Nacional Autónoma de México, Mexico City 04510, Mexico; (X.G.-M.); (L.F.-C.); (J.A.M.-V.)
| | - Laura Figueroa-Corona
- Instituto de Ecología, Universidad Nacional Autónoma de México, Mexico City 04510, Mexico; (X.G.-M.); (L.F.-C.); (J.A.M.-V.)
| | - Jorge Arturo Martínez-Villegas
- Instituto de Ecología, Universidad Nacional Autónoma de México, Mexico City 04510, Mexico; (X.G.-M.); (L.F.-C.); (J.A.M.-V.)
| | - Diana Soriano
- Facultad de Ciencias, Universidad Nacional Autónoma de México, Mexico City 04510, Mexico;
| | - Alicia Gamboa-deBuen
- Instituto de Ecología, Universidad Nacional Autónoma de México, Mexico City 04510, Mexico; (X.G.-M.); (L.F.-C.); (J.A.M.-V.)
- Correspondence:
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19
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Sano N, Marion-Poll A. ABA Metabolism and Homeostasis in Seed Dormancy and Germination. Int J Mol Sci 2021; 22:5069. [PMID: 34064729 PMCID: PMC8151144 DOI: 10.3390/ijms22105069] [Citation(s) in RCA: 69] [Impact Index Per Article: 23.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/19/2021] [Revised: 04/29/2021] [Accepted: 05/01/2021] [Indexed: 02/07/2023] Open
Abstract
Abscisic acid (ABA) is a key hormone that promotes dormancy during seed development on the mother plant and after seed dispersal participates in the control of dormancy release and germination in response to environmental signals. The modulation of ABA endogenous levels is largely achieved by fine-tuning, in the different seed tissues, hormone synthesis by cleavage of carotenoid precursors and inactivation by 8'-hydroxylation. In this review, we provide an overview of the current knowledge on ABA metabolism in developing and germinating seeds; notably, how environmental signals such as light, temperature and nitrate control seed dormancy through the adjustment of hormone levels. A number of regulatory factors have been recently identified which functional relationships with major transcription factors, such as ABA INSENSITIVE3 (ABI3), ABI4 and ABI5, have an essential role in the control of seed ABA levels. The increasing importance of epigenetic mechanisms in the regulation of ABA metabolism gene expression is also described. In the last section, we give an overview of natural variations of ABA metabolism genes and their effects on seed germination, which could be useful both in future studies to better understand the regulation of ABA metabolism and to identify candidates as breeding materials for improving germination properties.
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Affiliation(s)
| | - Annie Marion-Poll
- IJPB Institut Jean-Pierre Bourgin, INRAE, AgroParisTech, Université Paris-Saclay, 78000 Versailles, France;
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20
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Allotetraploidization in Brachypodium May Have Led to the Dominance of One Parent's Metabolome in Germinating Seeds. Cells 2021; 10:cells10040828. [PMID: 33917018 PMCID: PMC8067749 DOI: 10.3390/cells10040828] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2021] [Revised: 04/01/2021] [Accepted: 04/02/2021] [Indexed: 11/26/2022] Open
Abstract
Seed germination is a complex process during which a mature seed resumes metabolic activity to prepare for seedling growth. In this study, we performed a comparative metabolomic analysis of the embryo and endosperm using the community standard lines of three annual Brachypodium species, i.e., B. distachyon (Bd) and B. stacei (Bs) and their natural allotetraploid B. hybridum (BdBs) that has wider ecological range than the other two species. We explored how far the metabolomic impact of allotetraploidization would be observable as over-lapping changes at 4, 12, and 24 h after imbibition (HAI) with water when germination was initiated. Metabolic changes during germination were more prominent in Brachypodium embryos than in the endosperm. The embryo and endosperm metabolomes of Bs and BdBs were similar, and those of Bd were distinctive. The Bs and BdBs embryos showed increased levels of sugars and the tricarboxylic acid cycle compared to Bd, which could have been indicative of better nutrient mobilization from the endosperm. Bs and BdBs also showed higher oxalate levels that could aid nutrient transfer through altered cellular events. In Brachypodium endosperm, the thick cell wall, in addition to starch, has been suggested to be a source of nutrients to the embryo. Metabolites indicative of sugar metabolism in the endosperm of all three species were not prominent, suggesting that mobilization mostly occurred prior to 4 HAI. Hydroxycinnamic and monolignol changes in Bs and BdBs were consistent with cell wall remodeling that arose following the release of nutrients to the respective embryos. Amino acid changes in both the embryo and endosperm were broadly consistent across the species. Taking our data together, the formation of BdBs may have maintained much of the Bs metabolome in both the embryo and endosperm during the early stages of germination. In the embryo, this conserved Bs metabolome appeared to include an elevated sugar metabolism that played a vital role in germination. If these observations are confirmed in the future with more Brachypodium accessions, it would substantiate the dominance of the Bs metabolome in BdBs allotetraploidization and the use of metabolomics to suggest important adaptive changes.
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McGinty EM, Murphy KM, Hauvermale AL. Seed Dormancy and Preharvest Sprouting in Quinoa ( Chenopodium quinoa Willd.). PLANTS (BASEL, SWITZERLAND) 2021; 10:458. [PMID: 33670959 PMCID: PMC7997350 DOI: 10.3390/plants10030458] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/24/2020] [Revised: 02/24/2021] [Accepted: 02/24/2021] [Indexed: 01/13/2023]
Abstract
Quinoa (Chenopodium quinoa Willd.) is a culturally significant staple food source that has been grown for thousands of years in South America. Due to its natural drought and salinity tolerance, quinoa has emerged as an agronomically important crop for production in marginal soils, in highly variable climates, and as part of diverse crop rotations. Primary areas of quinoa research have focused on improving resistance to abiotic stresses and disease, improving yields, and increasing nutrition. However, an evolving issue impacting quinoa seed end-use quality is preharvest sprouting (PHS), which is when seeds with little to no dormancy experience a rain event prior to harvest and sprout on the panicle. Far less is understood about the mechanisms that regulate quinoa seed dormancy and seed viability. This review will cover topics including seed dormancy, orthodox and unorthodox dormancy programs, desiccation sensitivity, environmental and hormonal mechanisms that regulate seed dormancy, and breeding and non-breeding strategies for enhancing resistance to PHS in quinoa.
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Affiliation(s)
- Emma M. McGinty
- The School of Biological Sciences, Washington State University, P.O. Box 644236, Pullman, WA 99164, USA;
| | - Kevin M. Murphy
- Department of Crop and Soil Science, Washington State University, Pullman, WA 99164, USA;
| | - Amber L. Hauvermale
- Department of Crop and Soil Science, Washington State University, Pullman, WA 99164, USA;
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Kępczyński J, Wójcik A, Dziurka M. Avena fatua caryopsis dormancy release is associated with changes in KAR 1 and ABA sensitivity as well as with ABA reduction in coleorhiza and radicle. PLANTA 2021; 253:52. [PMID: 33507406 PMCID: PMC7843558 DOI: 10.1007/s00425-020-03562-4] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/06/2020] [Accepted: 12/31/2020] [Indexed: 05/07/2023]
Abstract
The dormancy release in Avena fatua caryopses was associated with a reduction in the ABA content in embryos, coleorhiza and radicle. The coleorhiza proved more sensitive to KAR1 and less sensitive to ABA than the radicle. The inability of dormant caryopses and ABA-treated non-dormant caryopses to complete germination is related to inhibition and delayed of cell-cycle activation, respectively. As freshly harvested Avena fatua caryopses are dormant at 20 °C, they cannot complete germination; the radicle is not able to emerge. Both karrikin 1 (KAR1) and dry after-ripening release dormancy, enabling the emergence of, first, the coleorhiza and later the radicle. The after-ripening removes caryopse sensitivity to KAR1 and decreases the sensitivity to abscisic acid (ABA). The coleorhiza was found to be more sensitive to KAR1, and less sensitive to ABA, than radicles. Effects of KAR1 and after-ripening were associated with a reduction of the embryo's ABA content during caryopsis germination. KAR1 was found to decrease the ABA content in the coleorhiza and radicles. Germination of after-ripened caryopses was associated with the progress of cell-cycle activation before coleorhiza emergence. Inhibition of the germination completion due to dormancy or treating the non-dormant caryopses with ABA was associated with a total and partial inhibition of cell-cycle activation, respectively.
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Affiliation(s)
- Jan Kępczyński
- Institute of Biology, University of Szczecin, Wąska 13, 71-415, Szczecin, Poland.
| | - Agata Wójcik
- Institute of Biology, University of Szczecin, Wąska 13, 71-415, Szczecin, Poland
| | - Michał Dziurka
- Institute of Plant Physiology, Polish Academy of Sciences, Niezapominajek 21, 20-239, Krakow, Poland
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Kępczyński J, Wójcik A, Dziurka M. Avena fatua caryopsis dormancy release is associated with changes in KAR 1 and ABA sensitivity as well as with ABA reduction in coleorhiza and radicle. PLANTA 2021; 253:52. [PMID: 33507406 DOI: 10.1007/s00425-020-03562-3564] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Subscribe] [Scholar Register] [Received: 10/06/2020] [Accepted: 12/31/2020] [Indexed: 05/25/2023]
Abstract
The dormancy release in Avena fatua caryopses was associated with a reduction in the ABA content in embryos, coleorhiza and radicle. The coleorhiza proved more sensitive to KAR1 and less sensitive to ABA than the radicle. The inability of dormant caryopses and ABA-treated non-dormant caryopses to complete germination is related to inhibition and delayed of cell-cycle activation, respectively. As freshly harvested Avena fatua caryopses are dormant at 20 °C, they cannot complete germination; the radicle is not able to emerge. Both karrikin 1 (KAR1) and dry after-ripening release dormancy, enabling the emergence of, first, the coleorhiza and later the radicle. The after-ripening removes caryopse sensitivity to KAR1 and decreases the sensitivity to abscisic acid (ABA). The coleorhiza was found to be more sensitive to KAR1, and less sensitive to ABA, than radicles. Effects of KAR1 and after-ripening were associated with a reduction of the embryo's ABA content during caryopsis germination. KAR1 was found to decrease the ABA content in the coleorhiza and radicles. Germination of after-ripened caryopses was associated with the progress of cell-cycle activation before coleorhiza emergence. Inhibition of the germination completion due to dormancy or treating the non-dormant caryopses with ABA was associated with a total and partial inhibition of cell-cycle activation, respectively.
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Affiliation(s)
- Jan Kępczyński
- Institute of Biology, University of Szczecin, Wąska 13, 71-415, Szczecin, Poland.
| | - Agata Wójcik
- Institute of Biology, University of Szczecin, Wąska 13, 71-415, Szczecin, Poland
| | - Michał Dziurka
- Institute of Plant Physiology, Polish Academy of Sciences, Niezapominajek 21, 20-239, Krakow, Poland
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Roso R, Nunes UR, Müller CA, Paranhos JT, Lopes SJ, Dornelles SHB, Bertagnolli CM, Huth C, Forte CT, Menegaes JF. Light quality and dormancy overcoming in seed germination of Echium plantagineum L. (Boraginaceae). BRAZ J BIOL 2020; 81:650-656. [PMID: 32876169 DOI: 10.1590/1519-6984.228777] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/16/2019] [Accepted: 03/03/2020] [Indexed: 11/21/2022] Open
Abstract
Light is considered a factor that influences the seed germination of many weed species, and it can signal whether the environmental conditions are favorable or are not favorable for germination. We aimed to study if there is an influence of light quality and dormancy overcoming in seed germination of Echium plantagineum L. We carried out a 2 x 6 factorial experiment, with and without dormancy overcoming with potassium nitrate followed by immersion in gibberellic acid; six light qualities, obtained through the light filters: blue, green, red, far-red, white light and absence of light. The evaluations performed were germination speed index (GSI), average germination time (AGT), germination at the four and 14 days after seeding (DAS), accumulated germination and relative frequency of germination. We observed significant interaction among the light qualities and seed dormancy overcoming or not for the studied variables. There was no significant effect of light qualities, in the evaluated variables, when performing dormancy overcoming, presenting germination above 90% in all the light qualities. However, without dormancy overcoming, we observed greater GSI, germination at four and 14 DAS for the red light filter with 5, 4, 29 and 45%, respectively. When the seeds were submitted to the absence of light, and without dormancy overcoming, there was only 7% of germination at 14 DAS. The seeds of E. plantagineum presented greater germination under incidence of red light, without dormancy overcoming, being classified as preferably positively photoblastics, provided that the dormancy is not overcome.
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Affiliation(s)
- R Roso
- Departamento de Fitotecnia, Universidade Federal de Santa Maria - UFSM, Av. Roraima, 1000, CEP 97105-900, Santa Maria, RS, Brasil
| | - U R Nunes
- Departamento de Fitotecnia, Universidade Federal de Santa Maria - UFSM, Av. Roraima, 1000, CEP 97105-900, Santa Maria, RS, Brasil
| | - C A Müller
- Departamento de Fitotecnia, Universidade Federal de Santa Maria - UFSM, Av. Roraima, 1000, CEP 97105-900, Santa Maria, RS, Brasil
| | - J T Paranhos
- Departamento de Biologia, Universidade Federal de Santa Maria - UFSM, Av. Roraima, 1000, CEP 97105-900, Santa Maria, RS, Brasil
| | - S J Lopes
- Departamento de Fitotecnia, Universidade Federal de Santa Maria - UFSM, Av. Roraima, 1000, CEP 97105-900, Santa Maria, RS, Brasil
| | - S H B Dornelles
- Departamento de Biologia, Universidade Federal de Santa Maria - UFSM, Av. Roraima, 1000, CEP 97105-900, Santa Maria, RS, Brasil
| | - C M Bertagnolli
- Ciências e Tecnologia de Sementes, Instituto Federal Farroupilha - IFFar, Campus de Júlio de Castilhos, RS 527, Bairro São João do Barro Preto, s/n, CEP 98130-000, Júlio de Castilhos, RS, Brasil
| | - C Huth
- Departamento de Fitotecnia, Universidade Federal de Santa Maria - UFSM, Av. Roraima, 1000, CEP 97105-900, Santa Maria, RS, Brasil
| | - C T Forte
- Departamento de Fitotecnia, Universidade Federal de Santa Maria - UFSM, Av. Roraima, 1000, CEP 97105-900, Santa Maria, RS, Brasil
| | - J F Menegaes
- Departamento de Fitotecnia, Universidade Federal de Santa Maria - UFSM, Av. Roraima, 1000, CEP 97105-900, Santa Maria, RS, Brasil
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Yang L, Liu S, Lin R. The role of light in regulating seed dormancy and germination. JOURNAL OF INTEGRATIVE PLANT BIOLOGY 2020; 62:1310-1326. [PMID: 32729981 DOI: 10.1111/jipb.13001] [Citation(s) in RCA: 57] [Impact Index Per Article: 14.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/13/2020] [Accepted: 07/29/2020] [Indexed: 05/22/2023]
Abstract
Seed dormancy is an adaptive trait in plants. Breaking seed dormancy determines the timing of germination and is, thereby essential for ensuring plant survival and agricultural production. Seed dormancy and the subsequent germination are controlled by both internal cues (mainly hormones) and environmental signals. In the past few years, the roles of plant hormones in regulating seed dormancy and germination have been uncovered. However, we are only beginning to understand how light signaling pathways modulate seed dormancy and interaction with endogenous hormones. In this review, we summarize current views of the molecular mechanisms by which light controls the induction, maintenance and release of seed dormancy, as well as seed germination, by regulating hormone metabolism and signaling pathways.
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Affiliation(s)
- Liwen Yang
- Key Laboratory of Photobiology, Institute of Botany, the Chinese Academy of Sciences, Beijing, 100093, China
| | - Shuangrong Liu
- Key Laboratory of Photobiology, Institute of Botany, the Chinese Academy of Sciences, Beijing, 100093, China
- University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Rongcheng Lin
- Key Laboratory of Photobiology, Institute of Botany, the Chinese Academy of Sciences, Beijing, 100093, China
- University of Chinese Academy of Sciences, Beijing, 100049, China
- CAS Center for Excellence in Molecular Plant Sciences, the Chinese Academy of Sciences, Beijing, 100093, China
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Wei L, You W, Gong Y, El Hajjami M, Liang W, Xu J, Poetsch A. Transcriptomic and proteomic choreography in response to light quality variation reveals key adaption mechanisms in marine Nannochloropsis oceanica. THE SCIENCE OF THE TOTAL ENVIRONMENT 2020; 720:137667. [PMID: 32325597 DOI: 10.1016/j.scitotenv.2020.137667] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/11/2019] [Revised: 02/04/2020] [Accepted: 02/29/2020] [Indexed: 06/11/2023]
Abstract
Photosynthetic organisms need to respond frequently to the fluctuation of light quality and light quantity in their habitat. In response to the fluctuation of different single wavelength lights, these organisms have to adjust and optimize the employment of light energy by redistributing excitation energy and remodeling photosystem stoichiometry or light complex structure. However, the response of whole cellular processes to fluctuations in single wavelength light is mostly unknown. Here, we report the transcriptomic and proteomic dynamics and metabolic adaptation mechanisms of Nannochloropsis oceanica to blue and red light. Preferential exposure to different light spectra induces massive reprogramming of the Nannochloropsis transcriptome and proteome. Combined with physiological and biochemical investigation, the rewiring of many cellular processes was observed, including carbon/nitrogen assimilation, photosynthesis, chlorophyll and cartenoid biosynthesis, reactive oxygen species (ROS) scavenging systems, and chromatin state regulation. A strong and rapid regulation of genes or proteins related to nitrogen metabolism, photosynthesis, chlorophyll synthesis, ROS scavenging system, and carotenoid metabolism were observed during 12 h and 24 h of exposure under red light. Additionally, two light harvesting complex proteins induced by blue light and one by red light were observed. The differential responses of N. oceanica to red and blue irradiation reveal how marine microalgae adapt to change in light quality and can be exploited for biofuel feedstock development.
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Affiliation(s)
- Li Wei
- Single-Cell Center, CAS Key Laboratory of Biofuels and Shandong Key Laboratory of Energy Genetics, Qingdao Institute of BioEnergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao, Shandong 266101, China; University of Chinese Academy of Sciences, Beijing 100049, China.
| | - Wuxin You
- Single-Cell Center, CAS Key Laboratory of Biofuels and Shandong Key Laboratory of Energy Genetics, Qingdao Institute of BioEnergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao, Shandong 266101, China; Department of Plant Biochemistry, Ruhr University Bochum, Bochum, Germany
| | - Yanhai Gong
- Single-Cell Center, CAS Key Laboratory of Biofuels and Shandong Key Laboratory of Energy Genetics, Qingdao Institute of BioEnergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao, Shandong 266101, China
| | - Mohamed El Hajjami
- Department of Plant Biochemistry, Ruhr University Bochum, Bochum, Germany
| | - Wensi Liang
- Single-Cell Center, CAS Key Laboratory of Biofuels and Shandong Key Laboratory of Energy Genetics, Qingdao Institute of BioEnergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao, Shandong 266101, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Jian Xu
- Single-Cell Center, CAS Key Laboratory of Biofuels and Shandong Key Laboratory of Energy Genetics, Qingdao Institute of BioEnergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao, Shandong 266101, China; University of Chinese Academy of Sciences, Beijing 100049, China.
| | - Ansgar Poetsch
- Department of Plant Biochemistry, Ruhr University Bochum, Bochum, Germany; Laboratory for Marine Biology and Biotechnology, Qingdao National Laboratory for Marine Science and Technology, Qingdao 266237, China; College of Marine Life Sciences, Ocean University of China, Qingdao 266003, China.
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Yu G, Wang J, Miao L, Xi M, Wang Q, Wang K. Optimization of Mature Embryo-Based Tissue Culture and Agrobacterium-Mediated Transformation in Model Grass Brachypodium distachyon. Int J Mol Sci 2019; 20:E5448. [PMID: 31683725 PMCID: PMC6862288 DOI: 10.3390/ijms20215448] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/03/2019] [Revised: 10/22/2019] [Accepted: 10/23/2019] [Indexed: 01/01/2023] Open
Abstract
Agrobacterium-mediated genetic transformation is well established in the model grass Brachypodium distachyon. However, most protocols employ immature embryos because of their better regenerative capacity. A major problem associated with the immature embryo system is that they are available only during a limited time window of growing plants. In this study, we have developed an optimized Agrobacterium-mediated genetic transformation protocol that utilizes mature embryos. We have adopted seed shearing and photoautotrophic rooting (PR) in callus induction and root regeneration, respectively, with evident significant improvement in these aspects. We have also revealed that the newly developed chemical inducer Fipexide (FPX) had the ability to induce callus, shoots, and roots. By comparison, we have demonstrated that FPX shows higher efficiency in shoot generation than other frequently used chemicals in our mature embryo-based system. In addition, we demonstrated that the age of embryogenetic callus severely affects the transformation efficiency (TE), with the seven-week-old embryogenetic callus having the highest TE reaching 52.6%, which is comparable with that in immature embryo transformation. The new methodologies reported here will advance the development and utilization of Brachypodium as a new model system for grass genomics.
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Affiliation(s)
- Guangrun Yu
- Key Laboratory of Genetics, Breeding and Multiple Utilization of Crops, Ministry of Education, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Center for Genomics and Biotechnology, Fujian Agriculture and Forestry University, Fuzhou 350002, Fujian, China.
| | - Jianyong Wang
- Co-Innovation Center for Sustainable Forestry in Southern China/Key Laboratory of Forest Genetics and Biotechnology of Ministry of Education, Nanjing Forestry University, Nanjing 210037, Jiangsu, China.
| | - Li Miao
- Key Laboratory of Genetics, Breeding and Multiple Utilization of Crops, Ministry of Education, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Center for Genomics and Biotechnology, Fujian Agriculture and Forestry University, Fuzhou 350002, Fujian, China.
| | - Mengli Xi
- Co-Innovation Center for Sustainable Forestry in Southern China/Key Laboratory of Forest Genetics and Biotechnology of Ministry of Education, Nanjing Forestry University, Nanjing 210037, Jiangsu, China.
| | - Qiongli Wang
- Key Laboratory of Genetics, Breeding and Multiple Utilization of Crops, Ministry of Education, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Center for Genomics and Biotechnology, Fujian Agriculture and Forestry University, Fuzhou 350002, Fujian, China.
| | - Kai Wang
- Key Laboratory of Genetics, Breeding and Multiple Utilization of Crops, Ministry of Education, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Center for Genomics and Biotechnology, Fujian Agriculture and Forestry University, Fuzhou 350002, Fujian, China.
- National Engineering Research Center of Sugarcane, Fujian Agriculture and Forestry University, Fuzhou 350002, Fujian, China.
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A Two-Stage Culture Method for Zygotic Embryos Effectively Overcomes Constraints Imposed by Hypocotyl and Epicotyl Seed Dormancy in Paeonia ostii 'Fengdan'. PLANTS 2019; 8:plants8100356. [PMID: 31547000 PMCID: PMC6843118 DOI: 10.3390/plants8100356] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/15/2019] [Revised: 08/30/2019] [Accepted: 09/18/2019] [Indexed: 11/17/2022]
Abstract
The effect of the exogenous hormone and light quality on breaking hypocotyl and epicotyl dormancy was studied. The results showed that the greatest percentage of hypocotyl dormancy breaking was observed with the Murashige and Skoog (MS) medium supplemented with or without 1.0 mg·L-1 gibberellin 3 (GA3), while ABA and endosperm greatly inhibited hypocotyl dormancy breaking. This suggests that hypocotyl dormancy of the Paeonia ostii 'Fengdan' embryo could be easily overcome by removing constraints of the surrounding endosperm, and ABA may be one of the constraint factors contained in the endosperm. The percentage of epicotyl dormancy breaking was also greatly affected by the concentration of 6-benzylaminopurine (BA) and GA3. Compared to BA by itself, adding GA3 to the medium containing BA highly enhanced epicotyl dormancy breaking, with the greatest percentage of epicotyl dormancy breaking in MS medium supplemented with both 0.5 mg·L-1 BA and 0.5-1.0 mg·L-1 GA3. The percentage of hypocotyl and epicotyl dormancy breaking was also affected by light and its quality. Red light-emitting diodes (LEDs) had the same effect as a dark condition on the hypocotyl dormancy breaking, while blue LEDs and a combination of red and blue LEDs had a negative effect on the hypocotyl dormancy breaking. Unexpectedly, blue LEDs greatly enhanced, whereas red LEDs inhibited, epicotyl dormancy breaking. Conclusively, a two-stage culture method was recommended for breaking the hypocotyl and epicotyl dormancy: hypocotyl dormancy was broken first using the MS medium without any plant growth regulators in the dark (25 °C), and epicotyl dormancy was subsequently broken with the MS medium supplemented with both 1.0 mg·L-1 GA3 and 0.5 mg·L-1 BA under blue light.
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El-Keblawy A, Elgabra M, Mosa KA, Fakhry A, Soliman S. Roles of Hardened Husks and Membranes Surrounding Brachypodium hybridum Grains on Germination and Seedling Growth. PLANTS 2019; 8:plants8090322. [PMID: 31484325 PMCID: PMC6784022 DOI: 10.3390/plants8090322] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/10/2019] [Revised: 08/31/2019] [Accepted: 09/01/2019] [Indexed: 01/05/2023]
Abstract
Several studies have assessed the function and significance of the presence of dead, hardened husks on germination and seedling growth in several grass species and reached to inconsistent results. Here, we assess the roles of husks (dead lemma and palea) and an inner membrane surrounding the grains on germination behaviour and seedling growth of Brachypodium hybridum, one of three species of the genetic model B. distachyon complex, in an arid mountain of Arabia. The interactive effects between temperature and the incubation light were assessed on germination of husked and dehusked-demembraned grains. Germination and seedling growth were assessed for different combinations of grain treatments (soaked and non-soaked husked, dehusked-membraned and dehusked-demembraned). Dehusked-demembraned grains were also germinated in different dormancy regulating compounds (DRCs) and light qualities (light, dark and different red: far red [R: FR] ratios). The results indicated an insignificant difference between husked and dehusked-membraned grains on final germination and the germination rate index (GRI), with the former producing significantly bigger seedlings. Removal of the inner-membrane resulted in a significant reduction in all traits. Soaking grains in water resulted in significant enhancements in germination and seedling growth of only husked grains. Husked-membraned and demembraned grains germinated more significantly and faster at lower rather than higher temperatures. None of different concentrations of several DRCs succeeded in enhancing final germination of dehusked-demembraned grains. Red-rich light significantly enhanced germination of dehusked-membraned grains in comparison to other light qualities. It could be concluded that the role of husks is to mainly enhance seedling growth, while the major role of the membrane is to increase final germination. The ability of red-rich light in enhancing the germination of dehusked-membraned but not dehusked-demembraned grains suggest a role for the inner membrane in regulating dormancy through differential filtering of light properties.
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Affiliation(s)
- Ali El-Keblawy
- Department of Applied Biology, College of Sciences, University of Sharjah, Sharjah PO Box 27272, UAE.
| | - Masarra Elgabra
- Department of Applied Biology, College of Sciences, University of Sharjah, Sharjah PO Box 27272, UAE.
| | - Kareem A Mosa
- Department of Applied Biology, College of Sciences, University of Sharjah, Sharjah PO Box 27272, UAE.
- Department of Biotechnology, Faculty of Agriculture, Al-Azhar University, Cairo 11651, Egypt.
| | - Amal Fakhry
- Department of Botany and Microbiology, Faculty of Science, Alexandria University, Alexandria 21568, Egypt.
| | - Sameh Soliman
- Department of Medicinal Chemistry, College of Pharmacy, University of Sharjah, Sharjah PO Box 27272, UAE.
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Li M, Kennedy A, Huybrechts M, Dochy N, Geuten K. The Effect of Ambient Temperature on Brachypodium distachyon Development. FRONTIERS IN PLANT SCIENCE 2019; 10:1011. [PMID: 31497030 PMCID: PMC6712961 DOI: 10.3389/fpls.2019.01011] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/12/2019] [Accepted: 07/18/2019] [Indexed: 05/05/2023]
Abstract
Due to climate change, the effect of temperature on crops has become a global concern. It has been reported that minor changes in temperature can cause large decreases in crop yield. While not a crop, the model Brachypodium distachyon can help to efficiently investigate ambient temperature responses of temperate grasses, which include wheat and barley. Here, we use different accessions to explore the effect of ambient temperature on Brachypodium phenology. We recorded leaf initiation, heading time, leaf and branch number at heading, seed set time, seed weight, seed size, seed dormancy, and seed germination at different temperatures. We found that warmer temperatures promote leaf initiation so that leaf number at heading is positively correlated to temperature. Heading time is not correlated to temperature but accessions show an optimal temperature at which heading is earliest. Cool temperatures prolong seed maturation which increases seed weight. The progeny seeds of plants grown at these cool ambient temperatures show stronger dormancy, while imbibition of seeds at low temperature improves germination. Among all developmental stages, it is the duration of seed maturation that is most sensitive to temperature. The results we found reveal that temperature responses in Brachypodium are highly conserved with temperate cereals, which makes Brachypodium a good model to explore temperature responsive pathways in temperate grasses.
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Affiliation(s)
| | | | | | | | - Koen Geuten
- Department of Biology, KU Leuven, Leuven, Belgium
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Mérai Z, Graeber K, Wilhelmsson P, Ullrich KK, Arshad W, Grosche C, Tarkowská D, Turečková V, Strnad M, Rensing SA, Leubner-Metzger G, Mittelsten Scheid O. Aethionema arabicum: a novel model plant to study the light control of seed germination. JOURNAL OF EXPERIMENTAL BOTANY 2019; 70:3313-3328. [PMID: 30949700 PMCID: PMC6598081 DOI: 10.1093/jxb/erz146] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/19/2018] [Accepted: 03/08/2019] [Indexed: 05/07/2023]
Abstract
The timing of seed germination is crucial for seed plants and is coordinated by internal and external cues, reflecting adaptations to different habitats. Physiological and molecular studies with lettuce and Arabidopsis thaliana have documented a strict requirement for light to initiate germination and identified many receptors, signaling cascades, and hormonal control elements. In contrast, seed germination in several other plants is inhibited by light, but the molecular basis of this alternative response is unknown. We describe Aethionema arabicum (Brassicaceae) as a suitable model plant to investigate the mechanism of germination inhibition by light, as this species has accessions with natural variation between light-sensitive and light-neutral responses. Inhibition of germination occurs in red, blue, or far-red light and increases with light intensity and duration. Gibberellins and abscisic acid are involved in the control of germination, as in Arabidopsis, but transcriptome comparisons of light- and dark-exposed A. arabicum seeds revealed that, upon light exposure, the expression of genes for key regulators undergo converse changes, resulting in antipodal hormone regulation. These findings illustrate that similar modular components of a pathway in light-inhibited, light-neutral, and light-requiring germination among the Brassicaceae have been assembled in the course of evolution to produce divergent pathways, likely as adaptive traits.
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Affiliation(s)
- Zsuzsanna Mérai
- Gregor Mendel Institute of Molecular Plant Biology, Austrian Academy of Sciences, Vienna BioCenter (VBC), Dr. Bohr-Gasse, Vienna, Austria
| | - Kai Graeber
- School of Biological Sciences, Plant Molecular Science and Centre for Systems and Synthetic Biology, Royal Holloway University of London, Egham, Surrey, UK
| | - Per Wilhelmsson
- Plant Cell Biology, Faculty of Biology, University of Marburg, Karl-von-Frisch-Str., Marburg, Germany
| | - Kristian K Ullrich
- Plant Cell Biology, Faculty of Biology, University of Marburg, Karl-von-Frisch-Str., Marburg, Germany
| | - Waheed Arshad
- School of Biological Sciences, Plant Molecular Science and Centre for Systems and Synthetic Biology, Royal Holloway University of London, Egham, Surrey, UK
| | - Christopher Grosche
- Plant Cell Biology, Faculty of Biology, University of Marburg, Karl-von-Frisch-Str., Marburg, Germany
| | - Danuše Tarkowská
- Laboratory of Growth Regulators, The Czech Academy of Sciences, Institute of Experimental Botany & Palacký University, Šlechtitelů, Olomouc, Czech Republic
| | - Veronika Turečková
- Laboratory of Growth Regulators, The Czech Academy of Sciences, Institute of Experimental Botany & Palacký University, Šlechtitelů, Olomouc, Czech Republic
| | - Miroslav Strnad
- Laboratory of Growth Regulators, The Czech Academy of Sciences, Institute of Experimental Botany & Palacký University, Šlechtitelů, Olomouc, Czech Republic
| | - Stefan A Rensing
- Plant Cell Biology, Faculty of Biology, University of Marburg, Karl-von-Frisch-Str., Marburg, Germany
| | - Gerhard Leubner-Metzger
- School of Biological Sciences, Plant Molecular Science and Centre for Systems and Synthetic Biology, Royal Holloway University of London, Egham, Surrey, UK
- Laboratory of Growth Regulators, The Czech Academy of Sciences, Institute of Experimental Botany & Palacký University, Šlechtitelů, Olomouc, Czech Republic
| | - Ortrun Mittelsten Scheid
- Gregor Mendel Institute of Molecular Plant Biology, Austrian Academy of Sciences, Vienna BioCenter (VBC), Dr. Bohr-Gasse, Vienna, Austria
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Alakärppä E, Taulavuori E, Valledor L, Marttila T, Jokipii-Lukkari S, Karppinen K, Nguyen N, Taulavuori K, Häggman H. Early growth of Scots pine seedlings is affected by seed origin and light quality. JOURNAL OF PLANT PHYSIOLOGY 2019; 237:120-128. [PMID: 31078909 DOI: 10.1016/j.jplph.2019.03.012] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/19/2018] [Revised: 03/22/2019] [Accepted: 03/22/2019] [Indexed: 06/09/2023]
Abstract
Plants have evolved a suite of photoreceptors to perceive information from the surrounding light conditions. The aim of this study was to examine photomorphogenic effects of light quality on the growth of Scots pine (Pinus sylvestris L.) seedlings representing southern (60 °N) and northern (68 °N) origins in Finland. We measured the growth characteristics and the expression of light-responsive genes from seedlings grown under two LED light spectra: (1) Retarder (blue and red wavelengths in ratio 0.7) inducing compact growth, and (2) Booster (moderate in blue, green and far-red wavelengths, and high intensity of red light) promoting shoot elongation. The results show that root elongation, biomass, and branching were reduced under Retarder spectrum in the seedlings representing both origins, while inhibition in seed germination and shoot elongation was mainly detected in the seedlings of northern origin. The expression of ZTL and HY5 was related to Scots pine growth under both light spectra. Moreover, the expression of PHYN correlated with growth when exposed to Retarder, whereas CRY2 expression was associated with growth under Booster. Our data indicates that blue light and the deficiency of far-red light limit the growth of Scots pine seedlings and that northern populations are more sensitive to blue light than southern populations. Furthermore, the data analyses suggest that ZTL and HY5 broadly participate in the light-mediated growth regulation of Scots pine, whereas PHYN responses to direct sunlight and the role of CRY2 is in shade avoidance. Altogether, our study extends the knowledge of light quality and differential gene expression affecting the early growth of Scots pines representing different latitudinal origins.
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Affiliation(s)
- Emmi Alakärppä
- Ecology and Genetics Research Unit, University of Oulu, P.O. Box 3000, FI-90014, Oulu, Finland.
| | - Erja Taulavuori
- Ecology and Genetics Research Unit, University of Oulu, P.O. Box 3000, FI-90014, Oulu, Finland.
| | - Luis Valledor
- Plant Physiology, Faculty of Biology, University of Oviedo, Cat. Rodrígo Uría s/n, E-33071, Oviedo, Spain.
| | - Toni Marttila
- Ecology and Genetics Research Unit, University of Oulu, P.O. Box 3000, FI-90014, Oulu, Finland.
| | - Soile Jokipii-Lukkari
- Department of Agricultural Sciences, Viikki Plant Science Centre, University of Helsinki, P.O. Box 27, FI-00014, Helsinki, Finland.
| | - Katja Karppinen
- Ecology and Genetics Research Unit, University of Oulu, P.O. Box 3000, FI-90014, Oulu, Finland.
| | - Nga Nguyen
- Ecology and Genetics Research Unit, University of Oulu, P.O. Box 3000, FI-90014, Oulu, Finland.
| | - Kari Taulavuori
- Ecology and Genetics Research Unit, University of Oulu, P.O. Box 3000, FI-90014, Oulu, Finland.
| | - Hely Häggman
- Ecology and Genetics Research Unit, University of Oulu, P.O. Box 3000, FI-90014, Oulu, Finland.
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Khan Z, Karamahmutoğlu H, Elitaş M, Yüce M, Budak H. THROUGH THE LOOKING GLASS: Real-Time Imaging in Brachypodium Roots and Osmotic Stress Analysis. PLANTS (BASEL, SWITZERLAND) 2019; 8:E14. [PMID: 30625995 PMCID: PMC6358813 DOI: 10.3390/plants8010014] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/17/2018] [Revised: 12/23/2018] [Accepted: 01/04/2019] [Indexed: 01/01/2023]
Abstract
To elucidate dynamic developmental processes in plants, live tissues and organs must be visualised frequently and for extended periods. The development of roots is studied at a cellular resolution not only to comprehend the basic processes fundamental to maintenance and pattern formation but also study stress tolerance adaptation in plants. Despite technological advancements, maintaining continuous access to samples and simultaneously preserving their morphological structures and physiological conditions without causing damage presents hindrances in the measurement, visualisation and analyses of growing organs including plant roots. We propose a preliminary system which integrates the optical real-time visualisation through light microscopy with a liquid culture which enables us to image at the tissue and cellular level horizontally growing Brachypodium roots every few minutes and up to 24 h. We describe a simple setup which can be used to track the growth of the root as it grows including the root tip growth and osmotic stress dynamics. We demonstrate the system's capability to scale down the PEG-mediated osmotic stress analysis and collected data on gene expression under osmotic stress.
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Affiliation(s)
- Zaeema Khan
- Molecular Biology, Genetics and Bioengineering Program, Faculty of Engineering and Natural Sciences, Sabanci University, Istanbul 34956, Turkey.
| | - Hande Karamahmutoğlu
- Mechatronics Program, Faculty of Engineering and Natural Sciences, Sabanci University, Istanbul 34956, Turkey.
| | - Meltem Elitaş
- Mechatronics Program, Faculty of Engineering and Natural Sciences, Sabanci University, Istanbul 34956, Turkey.
| | - Meral Yüce
- Sabanci University SUNUM Nanotechnology Research and Application Centre, Istanbul 34956, Turkey.
| | - Hikmet Budak
- Cereal Genomics Lab, Department of Plant Sciences and Plant Pathology, Montana State University, Bozeman, MT 59717, USA.
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34
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Gurrea-Ysasi G, Blanca-Gimenez V, Fita IC, Fita A, Prohens J, Rodriguez-Burruezo A. Spectral comparison of diffuse PAR irradiance under different tree and shrub shading conditions and in cloudy days. JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY. B, BIOLOGY 2018; 189:274-282. [PMID: 30428450 DOI: 10.1016/j.jphotobiol.2018.10.023] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/28/2018] [Revised: 10/25/2018] [Accepted: 10/29/2018] [Indexed: 06/09/2023]
Abstract
Spectral Solar Photosynthetically Photon Flux Density (PPFD) (380 to 780 nm) reaching the surface of a plant in different lighting conditions has been analyzed in order to better understand the different photosynthetic performance of plants depending on their spatial situation and the vegetation surrounding. A comparison between the shadow of several trees in a sunny day and the case of a cloudy day in an open space has been studied. Three isolated trees (a palm tree, an olive tree and a shrub oleander) and a tipuana grove have been studied. The study has been developed in Valencia (Spain) during January and February 2017. A portable Asensetek Standard ALP-01 spectrometer with a measurement wavelength range of 380 to 780 nm, has been used. Conditions with higher PPFD received are found to be, apart from those of a sunny day, those for cloudy day (with a spectral maximum in the Green region of the spectrum), and those for individual trees and shrub shadows in a sunny day (with a spectral maximum in the Blue region). The case in which less amount of PPFD is received is that under the shadow of tipuana grove (with a spectral maximum in the Infrared region of the spectrum). In fact the order of magnitude in which the PPFD in a cloudy day exceeds the PPFD under the tipuana grove shade is up to 20.
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Affiliation(s)
- G Gurrea-Ysasi
- Instituto COMAV, Edif. 8E, Acceso J, Ciudad Politécnica de la Innovación, Universitat Politècnica de València, Camino de Vera s/n, C.P. 46022, Valencia, Spain.
| | - V Blanca-Gimenez
- Instituto COMAV, Edif. 8E, Acceso J, Ciudad Politécnica de la Innovación, Universitat Politècnica de València, Camino de Vera s/n, C.P. 46022, Valencia, Spain
| | - I C Fita
- Instituto COMAV, Edif. 8E, Acceso J, Ciudad Politécnica de la Innovación, Universitat Politècnica de València, Camino de Vera s/n, C.P. 46022, Valencia, Spain
| | - A Fita
- Instituto COMAV, Edif. 8E, Acceso J, Ciudad Politécnica de la Innovación, Universitat Politècnica de València, Camino de Vera s/n, C.P. 46022, Valencia, Spain
| | - J Prohens
- Instituto COMAV, Edif. 8E, Acceso J, Ciudad Politécnica de la Innovación, Universitat Politècnica de València, Camino de Vera s/n, C.P. 46022, Valencia, Spain
| | - A Rodriguez-Burruezo
- Instituto COMAV, Edif. 8E, Acceso J, Ciudad Politécnica de la Innovación, Universitat Politècnica de València, Camino de Vera s/n, C.P. 46022, Valencia, Spain
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Germination and the Early Stages of Seedling Development in Brachypodium distachyon. Int J Mol Sci 2018; 19:ijms19102916. [PMID: 30257527 PMCID: PMC6212949 DOI: 10.3390/ijms19102916] [Citation(s) in RCA: 27] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/22/2018] [Revised: 09/21/2018] [Accepted: 09/22/2018] [Indexed: 01/27/2023] Open
Abstract
Successful germination and seedling development are crucial steps in the growth of a new plant. In this study, we investigated the course of the cell cycle during germination in relation to grain hydration in the model grass Brachypodium distachyon (Brachypodium) for the first time. Flow cytometry was performed to monitor the cell cycle progression during germination and to estimate DNA content in embryo tissues. The analyses of whole zygotic embryos revealed that the relative DNA content was 2C, 4C, 8C, and 16C. Endoreplicated nuclei were detected in the scutellum and coleorhiza cells, whereas the rest of the embryo tissues only had nuclei with a 2C and 4C DNA content. This study was accompanied by a spatiotemporal profile analysis of the DNA synthetic activity in the organs of Brachypodium embryos during germination using EdU labelling. Upon imbibition, nuclear DNA replication was initiated in the radicle within 11 h and subsequently spread towards the plumule. The first EdU-labelled prophases were observed after 14 h of imbibition. Analysis of selected genes that are involved in the regulation of the cell cycle, such as those encoding cyclin-dependent kinases and cyclins, demonstrated an increase in their expression profiles.
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Fidler J, Grabowska A, Prabucka B, Więsyk A, Góra-Sochacka A, Bielawski W, Pojmaj M, Zdunek-Zastocka E. The varied ability of grains to synthesize and catabolize ABA is one of the factors affecting dormancy and its release by after-ripening in imbibed triticale grains of cultivars with different pre-harvest sprouting susceptibilities. JOURNAL OF PLANT PHYSIOLOGY 2018; 226:48-55. [PMID: 29698912 DOI: 10.1016/j.jplph.2018.03.021] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/31/2017] [Revised: 03/01/2018] [Accepted: 03/15/2018] [Indexed: 06/08/2023]
Abstract
Abscisic acid (ABA) is a phytohormone involved in the acquisition of primary dormancy during seeds maturation as well as dormancy maintenance in imbibed seeds. After imbibition, the ABA content decreased to a much lower level in embryos of freshly harvested triticale grains of the Leontino cultivar, which is more susceptible to pre-harvest sprouting (PHS) than embryos of the Fredro cultivar. Lower ABA content in the Leontino cultivar resulted from increased expression of TsABA8'OH1 and TsABA8'OH2, which encode ABA 8'-hydroxylase and are involved in ABA catabolism. Higher ABA content and maintenance of dormancy in Fredro grains were correlated with intensified ABA biosynthesis, which resulted from higher expression of TsNCED1, which encodes 9-cis-epoxycarotenoid dioxygenase. These results suggest that grains of triticale cultivars with different resistance to PHS vary in their ability to metabolize ABA after imbibition. After-ripening did not affect the ABA content in embryos of dry grains of either triticale cultivar. However, after-ripening caused dormancy release in Fredro grains and significantly affected the ABA content and the rate of its metabolism after imbibition. A more rapid decline in ABA content in imbibed Fredro grains was accompanied by decreased transcript levels of TsNCED1 as well as increased expression of TsABA8'OH1 and TsABA8'OH2. Thus, after-ripening may affect dormancy of grains through reduction of the ABA biosynthesis rate and intensified ABA catabolism. Overexpression of TsNCED1 in tobacco increases ABA content and delays germination, while overexpression of TsABA8'OH2 decreases ABA content, accelerates germination, and reduces the sensitivity to ABA of transgenic seeds compared to seeds of wild-type plants. Therefore, these genes might play an important role in the regulation of triticale grain dormancy, thus affecting susceptibility to PHS.
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Affiliation(s)
- Justyna Fidler
- Department of Biochemistry, Warsaw University of Life Sciences - SGGW, Nowoursynowska 159, 02-776 Warsaw, Poland
| | - Agnieszka Grabowska
- Department of Biochemistry, Warsaw University of Life Sciences - SGGW, Nowoursynowska 159, 02-776 Warsaw, Poland
| | - Beata Prabucka
- Department of Biochemistry, Warsaw University of Life Sciences - SGGW, Nowoursynowska 159, 02-776 Warsaw, Poland
| | - Aneta Więsyk
- Institute of Biochemistry and Biophysics, Polish Academy of Sciences, Pawińskiego 5A, 02-106 Warsaw, Poland
| | - Anna Góra-Sochacka
- Institute of Biochemistry and Biophysics, Polish Academy of Sciences, Pawińskiego 5A, 02-106 Warsaw, Poland
| | - Wiesław Bielawski
- Department of Biochemistry, Warsaw University of Life Sciences - SGGW, Nowoursynowska 159, 02-776 Warsaw, Poland
| | | | - Edyta Zdunek-Zastocka
- Department of Biochemistry, Warsaw University of Life Sciences - SGGW, Nowoursynowska 159, 02-776 Warsaw, Poland.
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Izydorczyk C, Nguyen TN, Jo S, Son S, Tuan PA, Ayele BT. Spatiotemporal modulation of abscisic acid and gibberellin metabolism and signalling mediates the effects of suboptimal and supraoptimal temperatures on seed germination in wheat (Triticum aestivum L.). PLANT, CELL & ENVIRONMENT 2018; 41:1022-1037. [PMID: 28349595 DOI: 10.1111/pce.12949] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/07/2016] [Accepted: 02/27/2017] [Indexed: 05/02/2023]
Abstract
Seed germination is a complex process regulated by intrinsic hormonal cues such as abscisic acid (ABA) and gibberellin (GA), and environmental signals including temperature. Using pharmacological, molecular and metabolomics approaches, we show that supraoptimal temperature delays wheat seed germination through maintaining elevated embryonic ABA level via increased expression of ABA biosynthetic genes (TaNCED1 and TaNCED2), increasing embryo ABA sensitivity through upregulation of genes regulating ABA signalling positively (TaPYL5, TaSnRK2, ABI3 and ABI5) and decreasing embryo GA sensitivity via induction of TaRHT1 that regulates GA signalling negatively. Endospermic ABA and GA appeared to have minimal roles in regulating germination at supraoptimal temperature. Germination inhibition by suboptimal temperature is associated with elevated ABA level in the embryo and endosperm tissues, mediated by induction of TaNCEDs and decreased expression of endospermic ABA catabolic genes (TaCYP707As), and increased ABA sensitivity in both tissues via upregulation of TaPYL5, TaSnRK2, ABI3 and ABI5 in the embryo and TaSnRK2 and ABI5 in the endosperm. Furthermore, suboptimal temperature suppresses GA synthesis in both tissues and GA sensitivity in the embryo via repressing GA biosynthetic genes (TaGA20ox and TaGA3ox2) and inducing TaRHT1, respectively. These results highlight that spatiotemporal modulation of ABA and GA metabolism and signalling in wheat seeds underlies germination response to temperature.
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Affiliation(s)
- Conrad Izydorczyk
- Department of Plant Science, University of Manitoba, 222 Agriculture Building, Winnipeg, Manitoba, R3T 2N2, Canada
| | - Tran-Nguyen Nguyen
- Department of Plant Science, University of Manitoba, 222 Agriculture Building, Winnipeg, Manitoba, R3T 2N2, Canada
| | - SeoHyun Jo
- Department of Plant Science, University of Manitoba, 222 Agriculture Building, Winnipeg, Manitoba, R3T 2N2, Canada
| | - SeungHyun Son
- Department of Plant Science, University of Manitoba, 222 Agriculture Building, Winnipeg, Manitoba, R3T 2N2, Canada
| | - Pham Anh Tuan
- Department of Plant Science, University of Manitoba, 222 Agriculture Building, Winnipeg, Manitoba, R3T 2N2, Canada
| | - Belay T Ayele
- Department of Plant Science, University of Manitoba, 222 Agriculture Building, Winnipeg, Manitoba, R3T 2N2, Canada
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Tuan PA, Kumar R, Rehal PK, Toora PK, Ayele BT. Molecular Mechanisms Underlying Abscisic Acid/Gibberellin Balance in the Control of Seed Dormancy and Germination in Cereals. FRONTIERS IN PLANT SCIENCE 2018; 9:668. [PMID: 29875780 PMCID: PMC5974119 DOI: 10.3389/fpls.2018.00668] [Citation(s) in RCA: 133] [Impact Index Per Article: 22.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/11/2018] [Accepted: 04/30/2018] [Indexed: 05/18/2023]
Abstract
Seed dormancy is an adaptive trait that does not allow the germination of an intact viable seed under favorable environmental conditions. Non-dormant seeds or seeds with low level of dormancy can germinate readily under optimal environmental conditions, and such a trait leads to preharvest sprouting, germination of seeds on the mother plant prior to harvest, which significantly reduces the yield and quality of cereal crops. High level of dormancy, on the other hand, may lead to non-uniform germination and seedling establishment. Therefore, intermediate dormancy is considered to be a desirable trait as it prevents the problems of sprouting and allows uniformity of postharvest germination of seeds. Induction, maintenance, and release of seed dormancy are complex physiological processes that are influenced by a wide range of endogenous and environmental factors. Plant hormones, mainly abscisic acid (ABA) and gibberellin (GA), are the major endogenous factors that act antagonistically in the control of seed dormancy and germination; ABA positively regulates the induction and maintenance of dormancy, while GA enhances germination. Significant progress has been made in recent years in the elucidation of molecular mechanisms regulating ABA/GA balance and thereby dormancy and germination in cereal seeds, and this review summarizes the current state of knowledge on the topic.
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Yamasaki Y, Gao F, Jordan MC, Ayele BT. Seed maturation associated transcriptional programs and regulatory networks underlying genotypic difference in seed dormancy and size/weight in wheat (Triticum aestivum L.). BMC PLANT BIOLOGY 2017; 17:154. [PMID: 28915785 PMCID: PMC5603048 DOI: 10.1186/s12870-017-1104-5] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/15/2017] [Accepted: 09/08/2017] [Indexed: 05/18/2023]
Abstract
BACKGROUND Maturation forms one of the critical seed developmental phases and it is characterized mainly by programmed cell death, dormancy and desiccation, however, the transcriptional programs and regulatory networks underlying acquisition of dormancy and deposition of storage reserves during the maturation phase of seed development are poorly understood in wheat. The present study performed comparative spatiotemporal transcriptomic analysis of seed maturation in two wheat genotypes with contrasting seed weight/size and dormancy phenotype. RESULTS The embryo and endosperm tissues of maturing seeds appeared to exhibit genotype-specific temporal shifts in gene expression profile that might contribute to the seed phenotypic variations. Functional annotations of gene clusters suggest that the two tissues exhibit distinct but genotypically overlapping molecular functions. Motif enrichment predicts genotypically distinct abscisic acid (ABA) and gibberellin (GA) regulated transcriptional networks contribute to the contrasting seed weight/size and dormancy phenotypes between the two genotypes. While other ABA responsive element (ABRE) motifs are enriched in both genotypes, the prevalence of G-box-like motif specifically in tissues of the dormant genotype suggests distinct ABA mediated transcriptional mechanisms control the establishment of dormancy during seed maturation. In agreement with this, the bZIP transcription factors that co-express with ABRE enriched embryonic genes differ with genotype. The enrichment of SITEIIATCYTC motif specifically in embryo clusters of maturing seeds irrespective of genotype predicts a tissue specific role for the respective TCP transcription factors with no or minimal contribution to the variations in seed dormancy. CONCLUSION The results of this study advance our understanding of the seed maturation associated molecular mechanisms underlying variation in dormancy and weight/size in wheat seeds, which is a critical step towards the designing of molecular strategies for enhancing seed yield and quality.
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Affiliation(s)
- Yuji Yamasaki
- Department of Plant Science, University of Manitoba, 222 Agriculture Building, Winnipeg, MB R3T 2N2 Canada
| | - Feng Gao
- Department of Plant Science, University of Manitoba, 222 Agriculture Building, Winnipeg, MB R3T 2N2 Canada
| | - Mark C. Jordan
- Morden Research and Development Centre, Agriculture and Agri-Food Canada, Morden, MB R6M 1Y5 Canada
| | - Belay T. Ayele
- Department of Plant Science, University of Manitoba, 222 Agriculture Building, Winnipeg, MB R3T 2N2 Canada
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40
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Kanjana W, Suzuki T, Ishii K, Kozaki T, Iigo M, Yamane K. Transcriptome analysis of seed dormancy after rinsing and chilling in ornamental peaches (Prunus persica (L.) Batsch). BMC Genomics 2016; 17:575. [PMID: 27501791 PMCID: PMC4977653 DOI: 10.1186/s12864-016-2973-y] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2016] [Accepted: 07/28/2016] [Indexed: 11/24/2022] Open
Abstract
Background Ornamental peaches cv. ‘Yaguchi’ (Prunus persica (L.) Batsch) can be propagated via seeds. The establishment of efficient seed treatments for early germination and seedling growth is required to shorten nursery and breeding periods. It is important, therefore, to identify potential candidate genes responsible for the effects of rinsing and chilling on seed germination. We hypothesized that longer rinsing combined with chilling of seeds can alter the genes expression in related to dormancy and then raise the germination rate in the peach. To date, most molecular studies in peaches have involved structural genomics, and few transcriptome studies of seed germination have been conducted. In this study, we investigated the function of key seed dormancy-related genes using next-generation sequencing to profile the transcriptomes involved in seed dormancy in peaches. De novo assembly and analysis of the transcriptome identified differentially expressed and unique genes present in this fruit. Results De novo RNA-sequencing of peach was performed using the Illumina Miseq 2000 system. Paired-end sequence from mRNAs generated high quality sequence reads (9,049,964, 10,026,362 and 10,101,918 reads) from ‘Yaguchi’ peach seeds before rinsed (BR) and after rinsed for 2 or 7 days with a chilling period of 4 weeks (termed 2D4W and 7D4W), respectively. The germination rate of 7D4W was significantly higher than that of 2D4W. In total, we obtained 51,366 unique sequences. Differential expression analysis identified 7752, 8469 and 506 differentially expressed genes from BR vs 2D4W, BR vs 7D4W and 2D4W vs 7D4W libraries respectively, filtered based on p-value and an adjusted false discovery rate of less than 0.05. This study identified genes associated with the rinsing and chilling process that included those associated with phytohormones, the stress response and transcription factors. 7D4W treatment downregulated genes involved in ABA synthesis, catabolism and signaling pathways, which eventually suppressed abscisic acid activity and consequently promoted germination and seedling growth. Stress response genes were also downregulated by the 7D4W treatment, suggesting that this treatment released seeds from endodormancy. Transcription factors were upregulated by the BR and 2D4W treatment, suggesting that they play important roles in maintaining seed dormancy. Conclusions This work indicated that longer rinsing combined with chilling affects gene expression and germination rate, and identified potential candidate genes responsible for dormancy progression in seeds of ‘Yaguchi’ peach. The results could be used to develop breeding programs and will aid future functional genomic research in peaches and other fruit trees. Electronic supplementary material The online version of this article (doi:10.1186/s12864-016-2973-y) contains supplementary material, which is available to authorized users.
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Affiliation(s)
- Worarad Kanjana
- United Graduate School of Agricultural Science, Tokyo University of Agriculture and Technology, Fuchu, Tokyo, 183-8509, Japan.,Faculty of Agriculture, Utsunomiya University, Utsunomiya, Tochigi, 321-8505, Japan
| | - Tomohiro Suzuki
- Bioscience Education and Research Center, Utsunomiya University, Utsunomiya, Tochigi, 321-8505, Japan
| | - Kazuo Ishii
- Department of Applied Biological Science, Faculty of Agriculture, Tokyo University of Agriculture and Technology, Fuchu, Tokyo, 183-8509, Japan
| | - Toshinori Kozaki
- Department of Applied Biological Science, Faculty of Agriculture, Tokyo University of Agriculture and Technology, Fuchu, Tokyo, 183-8509, Japan
| | - Masayuki Iigo
- Bioscience Education and Research Center, Utsunomiya University, Utsunomiya, Tochigi, 321-8505, Japan.,Faculty of Agriculture, Utsunomiya University, Utsunomiya, Tochigi, 321-8505, Japan
| | - Kenji Yamane
- Bioscience Education and Research Center, Utsunomiya University, Utsunomiya, Tochigi, 321-8505, Japan. .,Faculty of Agriculture, Utsunomiya University, Utsunomiya, Tochigi, 321-8505, Japan.
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Vesty EF, Saidi Y, Moody LA, Holloway D, Whitbread A, Needs S, Choudhary A, Burns B, McLeod D, Bradshaw SJ, Bae H, King BC, Bassel GW, Simonsen HT, Coates JC. The decision to germinate is regulated by divergent molecular networks in spores and seeds. THE NEW PHYTOLOGIST 2016; 211:952-66. [PMID: 27257104 PMCID: PMC4950004 DOI: 10.1111/nph.14018] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/09/2016] [Accepted: 04/16/2016] [Indexed: 05/15/2023]
Abstract
Dispersal is a key step in land plant life cycles, usually via formation of spores or seeds. Regulation of spore- or seed-germination allows control over the timing of transition from one generation to the next, enabling plant dispersal. A combination of environmental and genetic factors determines when seed germination occurs. Endogenous hormones mediate this decision in response to the environment. Less is known about how spore germination is controlled in earlier-evolving nonseed plants. Here, we present an in-depth analysis of the environmental and hormonal regulation of spore germination in the model bryophyte Physcomitrella patens (Aphanoregma patens). Our data suggest that the environmental signals regulating germination are conserved, but also that downstream hormone integration pathways mediating these responses in seeds were acquired after the evolution of the bryophyte lineage. Moreover, the role of abscisic acid and diterpenes (gibberellins) in germination assumed much greater importance as land plant evolution progressed. We conclude that the endogenous hormone signalling networks mediating germination in response to the environment may have evolved independently in spores and seeds. This paves the way for future research about how the mechanisms of plant dispersal on land evolved.
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Affiliation(s)
- Eleanor F. Vesty
- School of BiosciencesUniversity of BirminghamEdgbastonBirminghamB15 2TTUK
| | - Younousse Saidi
- School of BiosciencesUniversity of BirminghamEdgbastonBirminghamB15 2TTUK
| | - Laura A. Moody
- School of BiosciencesUniversity of BirminghamEdgbastonBirminghamB15 2TTUK
| | - Daniel Holloway
- School of BiosciencesUniversity of BirminghamEdgbastonBirminghamB15 2TTUK
| | - Amy Whitbread
- School of BiosciencesUniversity of BirminghamEdgbastonBirminghamB15 2TTUK
| | - Sarah Needs
- School of BiosciencesUniversity of BirminghamEdgbastonBirminghamB15 2TTUK
| | - Anushree Choudhary
- School of BiosciencesUniversity of BirminghamEdgbastonBirminghamB15 2TTUK
| | - Bethany Burns
- School of BiosciencesUniversity of BirminghamEdgbastonBirminghamB15 2TTUK
| | - Daniel McLeod
- School of BiosciencesUniversity of BirminghamEdgbastonBirminghamB15 2TTUK
| | - Susan J. Bradshaw
- School of BiosciencesUniversity of BirminghamEdgbastonBirminghamB15 2TTUK
| | - Hansol Bae
- Department of Systems BiologyTechnical University of DenmarkSøltofts Plads, 2800 KgsLyngbyDenmark
| | - Brian Christopher King
- Department of Plant and Environmental SciencesUniversity of CopenhagenThorvaldsensvej 40Frederiksberg C1871Denmark
| | - George W. Bassel
- School of BiosciencesUniversity of BirminghamEdgbastonBirminghamB15 2TTUK
| | - Henrik Toft Simonsen
- Department of Systems BiologyTechnical University of DenmarkSøltofts Plads, 2800 KgsLyngbyDenmark
| | - Juliet C. Coates
- School of BiosciencesUniversity of BirminghamEdgbastonBirminghamB15 2TTUK
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Son S, Chitnis VR, Liu A, Gao F, Nguyen TN, Ayele BT. Abscisic acid metabolic genes of wheat (Triticum aestivum L.): identification and insights into their functionality in seed dormancy and dehydration tolerance. PLANTA 2016; 244:429-47. [PMID: 27091738 DOI: 10.1007/s00425-016-2518-2] [Citation(s) in RCA: 35] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/26/2016] [Accepted: 04/01/2016] [Indexed: 05/23/2023]
Abstract
The three homeologues of wheat NCED2 were identified; the wheat NCED2A and CYP707A1B affect seed ABA level and dormancy but not leaf ABA level and transpirational water loss in Arabidopsis. Biosynthesis and catabolism of abscisic acid (ABA) in plants are primarily regulated by 9-cis-epoxycarotenoid dioxygenases (NCEDs) and ABA 8'-hydroxylase (ABA8'OH), respectively. The present study identified the complete coding sequences of a second NCED gene, designated as TaNCED2, and its homeologues (TaNCED2A, TaNCED2B and TaNCED2D) in hexaploid wheat, and characterized its functionality in seed dormancy and leaf dehydration tolerance using the TaNCED2A homeologue. The study also investigated the role of the B genome copy of the cytochrome P450 monooxygenase 707A1 (CYP707A1) gene of hexaploid wheat (TaCYP707A1B), which encodes ABA8'OH, in regulating the two traits as this has not been studied before. Ectopic expression of TaNCED2A and TaCYP707A1B in Arabidopsis resulted in altered seed ABA level and dormancy with no effect on leaf ABA content and transpirational water loss. To gain insights into the physiological roles of TaNCED2 and TaCYP707A1 in wheat, the study examined their spatiotemporal expression patterns and determined the genomic contributions of transcripts to their total expression.
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Affiliation(s)
- SeungHyun Son
- Department of Plant Science, 222 Agriculture Building, University of Manitoba, Winnipeg, MB, R3T 2N2, Canada
| | - Vijaya R Chitnis
- Department of Plant Science, 222 Agriculture Building, University of Manitoba, Winnipeg, MB, R3T 2N2, Canada
| | - Aihua Liu
- Department of Plant Science, 222 Agriculture Building, University of Manitoba, Winnipeg, MB, R3T 2N2, Canada
| | - Feng Gao
- Department of Plant Science, 222 Agriculture Building, University of Manitoba, Winnipeg, MB, R3T 2N2, Canada
| | - Tran-Nguyen Nguyen
- Department of Plant Science, 222 Agriculture Building, University of Manitoba, Winnipeg, MB, R3T 2N2, Canada
| | - Belay T Ayele
- Department of Plant Science, 222 Agriculture Building, University of Manitoba, Winnipeg, MB, R3T 2N2, Canada.
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Cass CL, Lavell AA, Santoro N, Foster CE, Karlen SD, Smith RA, Ralph J, Garvin DF, Sedbrook JC. Cell Wall Composition and Biomass Recalcitrance Differences Within a Genotypically Diverse Set of Brachypodium distachyon Inbred Lines. FRONTIERS IN PLANT SCIENCE 2016; 7:708. [PMID: 27303415 PMCID: PMC4880586 DOI: 10.3389/fpls.2016.00708] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/23/2015] [Accepted: 05/09/2016] [Indexed: 05/09/2023]
Abstract
Brachypodium distachyon (Brachypodium) has emerged as a useful model system for studying traits unique to graminaceous species including bioenergy crop grasses owing to its amenability to laboratory experimentation and the availability of extensive genetic and germplasm resources. Considerable natural variation has been uncovered for a variety of traits including flowering time, vernalization responsiveness, and above-ground growth characteristics. However, cell wall composition differences remain underexplored. Therefore, we assessed cell wall-related traits relevant to biomass conversion to biofuels in seven Brachypodium inbred lines that were chosen based on their high level of genotypic diversity as well as available genome sequences and recombinant inbred line (RIL) populations. Senesced stems plus leaf sheaths from these lines exhibited significant differences in acetyl bromide soluble lignin (ABSL), cell wall polysaccharide-derived sugars, hydroxycinnamates content, and syringyl:guaiacyl:p-hydroxyphenyl (S:G:H) lignin ratios. Free glucose, sucrose, and starch content also differed significantly in senesced stems, as did the amounts of sugars released from cell wall polysaccharides (digestibility) upon exposure to a panel of thermochemical pretreatments followed by hydrolytic enzymatic digestion. Correlations were identified between inbred line lignin compositions and plant growth characteristics such as biomass accumulation and heading date (HD), and between amounts of cell wall polysaccharides and biomass digestibility. Finally, stem cell wall p-coumarate and ferulate contents and free-sugars content changed significantly with increased duration of vernalization for some inbred lines. Taken together, these results show that Brachypodium displays substantial phenotypic variation with respect to cell wall composition and biomass digestibility, with some compositional differences correlating with growth characteristics. Moreover, besides influencing HD and biomass accumulation, vernalization was found to affect cell wall composition and free sugars accumulation in some Brachypodium inbred lines, suggesting genetic differences in how vernalization affects carbon flux to polysaccharides. The availability of related RIL populations will allow for the genetic and molecular dissection of this natural variation, the knowledge of which may inform ways to genetically improve bioenergy crop grasses.
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Affiliation(s)
- Cynthia L. Cass
- School of Biological Sciences, Illinois State University, NormalIL, USA
- U.S. Department of Energy Great Lakes Bioenergy Research Center, University of Wisconsin-Madison, MadisonWI, USA
| | - Anastasiya A. Lavell
- Department of Agronomy and Plant Genetics, University of Minnesota, St. PaulMN, USA
- Plant Science Research Unit, United States Department of Agriculture, Agricultural Research Service, St. PaulMN, USA
| | - Nicholas Santoro
- U.S. Department of Energy Great Lakes Bioenergy Research Center, Michigan State University, East LansingMI, USA
| | - Cliff E. Foster
- U.S. Department of Energy Great Lakes Bioenergy Research Center, Michigan State University, East LansingMI, USA
| | - Steven D. Karlen
- U.S. Department of Energy Great Lakes Bioenergy Research Center, University of Wisconsin-Madison, MadisonWI, USA
| | - Rebecca A. Smith
- U.S. Department of Energy Great Lakes Bioenergy Research Center, University of Wisconsin-Madison, MadisonWI, USA
| | - John Ralph
- U.S. Department of Energy Great Lakes Bioenergy Research Center, University of Wisconsin-Madison, MadisonWI, USA
- Department of Biochemistry, University of Wisconsin-Madison, MadisonWI, USA
| | - David F. Garvin
- Department of Agronomy and Plant Genetics, University of Minnesota, St. PaulMN, USA
- Plant Science Research Unit, United States Department of Agriculture, Agricultural Research Service, St. PaulMN, USA
| | - John C. Sedbrook
- School of Biological Sciences, Illinois State University, NormalIL, USA
- U.S. Department of Energy Great Lakes Bioenergy Research Center, University of Wisconsin-Madison, MadisonWI, USA
- *Correspondence: John C. Sedbrook,
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D’Orso F, De Leonardis AM, Salvi S, Gadaleta A, Ruberti I, Cattivelli L, Morelli G, Mastrangelo AM. Conservation of AtTZF1, AtTZF2, and AtTZF3 homolog gene regulation by salt stress in evolutionarily distant plant species. FRONTIERS IN PLANT SCIENCE 2015; 6:394. [PMID: 26136754 PMCID: PMC4468379 DOI: 10.3389/fpls.2015.00394] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/29/2015] [Accepted: 05/18/2015] [Indexed: 05/20/2023]
Abstract
Arginine-rich tandem zinc-finger proteins (RR-TZF) participate in a wide range of plant developmental processes and adaptive responses to abiotic stress, such as cold, salt, and drought. This study investigates the conservation of the genes AtTZF1-5 at the level of their sequences and expression across plant species. The genomic sequences of the two RR-TZF genes TdTZF1-A and TdTZF1-B were isolated in durum wheat and assigned to chromosomes 3A and 3B, respectively. Sequence comparisons revealed that they encode proteins that are highly homologous to AtTZF1, AtTZF2, and AtTZF3. The expression profiles of these RR-TZF durum wheat and Arabidopsis proteins support a common function in the regulation of seed germination and responses to abiotic stress. In particular, analysis of plants with attenuated and overexpressed AtTZF3 indicate that AtTZF3 is a negative regulator of seed germination under conditions of salt stress. Finally, comparative sequence analyses establish that the RR-TZF genes are encoded by lower plants, including the bryophyte Physcomitrella patens and the alga Chlamydomonas reinhardtii. The regulation of the Physcomitrella AtTZF1-2-3-like genes by salt stress strongly suggests that a subgroup of the RR-TZF proteins has a function that has been conserved throughout evolution.
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Affiliation(s)
- Fabio D’Orso
- Food and Nutrition Research Centre, Council for Agricultural Research and EconomicsRome, Italy
| | - Anna M. De Leonardis
- Cereal Research Centre, Council for Agricultural Research and EconomicsFoggia, Italy
- Department of the Sciences of Agriculture, Food and Environment, University of FoggiaFoggia, Italy
| | - Sergio Salvi
- Food and Nutrition Research Centre, Council for Agricultural Research and EconomicsRome, Italy
| | - Agata Gadaleta
- Department of Soil, Plant and Food Sciences, “Aldo Moro” University of BariBari, Italy
| | - Ida Ruberti
- Institute of Molecular Biology and Pathology, National Research CouncilRome, Italy
| | - Luigi Cattivelli
- Cereal Research Centre, Council for Agricultural Research and EconomicsFoggia, Italy
- Genomics Research Centre, Council for Agricultural Research and EconomicsFiorenzuola d’Arda, Italy
| | - Giorgio Morelli
- Food and Nutrition Research Centre, Council for Agricultural Research and EconomicsRome, Italy
- *Correspondence: Anna M. Mastrangelo, Cereal Research Centre, Council for Agricultural Research and Economics, SS 16 Km 675, 71122 Foggia, Italy ; Giorgio Morelli, Food and Nutrition Research Centre, Council for Agricultural Research and Economics, Via Ardeatina 546, 00178 Rome, Italy
| | - Anna M. Mastrangelo
- Cereal Research Centre, Council for Agricultural Research and EconomicsFoggia, Italy
- *Correspondence: Anna M. Mastrangelo, Cereal Research Centre, Council for Agricultural Research and Economics, SS 16 Km 675, 71122 Foggia, Italy ; Giorgio Morelli, Food and Nutrition Research Centre, Council for Agricultural Research and Economics, Via Ardeatina 546, 00178 Rome, Italy
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Girin T, David LC, Chardin C, Sibout R, Krapp A, Ferrario-Méry S, Daniel-Vedele F. Brachypodium: a promising hub between model species and cereals. JOURNAL OF EXPERIMENTAL BOTANY 2014; 65:5683-96. [PMID: 25262566 DOI: 10.1093/jxb/eru376] [Citation(s) in RCA: 32] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/18/2023]
Abstract
Brachypodium distachyon was proposed as a model species for genetics and molecular genomics in cereals less than 10 years ago. It is now established as a standard for research on C3 cereals on a variety of topics, due to its close phylogenetic relationship with Triticeae crops such as wheat and barley, and to its simple genome, its minimal growth requirement, and its short life cycle. In this review, we first highlight the tools and resources for Brachypodium that are currently being developed and made available by the international community. We subsequently describe how this species has been used for comparative genomic studies together with cereal crops, before illustrating major research fields in which Brachypodium has been successfully used as a model: cell wall synthesis, plant-pathogen interactions, root architecture, and seed development. Finally, we discuss the usefulness of research on Brachypodium in order to improve nitrogen use efficiency in cereals, with the aim of reducing the amount of applied fertilizer while increasing the grain yield. Several paths are considered, namely an improvement of either nitrogen remobilization from the vegetative organs, nitrate uptake from the soil, or nitrate assimilation by the plant. Altogether, these examples position the research on Brachypodium as at an intermediate stage between basic research, carried out mainly in Arabidopsis, and applied research carried out on wheat and barley, enabling a complementarity of the studies and reciprocal benefits.
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Affiliation(s)
- Thomas Girin
- Institut National de la Recherche Agronomique (INRA), UMR1318, Institut Jean-Pierre Bourgin, Saclay Plant Sciences, RD10, F-78000 Versailles, France AgroParisTech, Institut Jean-Pierre Bourgin, RD10, F-78000 Versailles, France
| | - Laure C David
- Institut National de la Recherche Agronomique (INRA), UMR1318, Institut Jean-Pierre Bourgin, Saclay Plant Sciences, RD10, F-78000 Versailles, France AgroParisTech, Institut Jean-Pierre Bourgin, RD10, F-78000 Versailles, France
| | - Camille Chardin
- Institut National de la Recherche Agronomique (INRA), UMR1318, Institut Jean-Pierre Bourgin, Saclay Plant Sciences, RD10, F-78000 Versailles, France AgroParisTech, Institut Jean-Pierre Bourgin, RD10, F-78000 Versailles, France
| | - Richard Sibout
- Institut National de la Recherche Agronomique (INRA), UMR1318, Institut Jean-Pierre Bourgin, Saclay Plant Sciences, RD10, F-78000 Versailles, France AgroParisTech, Institut Jean-Pierre Bourgin, RD10, F-78000 Versailles, France
| | - Anne Krapp
- Institut National de la Recherche Agronomique (INRA), UMR1318, Institut Jean-Pierre Bourgin, Saclay Plant Sciences, RD10, F-78000 Versailles, France AgroParisTech, Institut Jean-Pierre Bourgin, RD10, F-78000 Versailles, France
| | - Sylvie Ferrario-Méry
- Institut National de la Recherche Agronomique (INRA), UMR1318, Institut Jean-Pierre Bourgin, Saclay Plant Sciences, RD10, F-78000 Versailles, France AgroParisTech, Institut Jean-Pierre Bourgin, RD10, F-78000 Versailles, France
| | - Françoise Daniel-Vedele
- Institut National de la Recherche Agronomique (INRA), UMR1318, Institut Jean-Pierre Bourgin, Saclay Plant Sciences, RD10, F-78000 Versailles, France AgroParisTech, Institut Jean-Pierre Bourgin, RD10, F-78000 Versailles, France
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Mollard FPO, Naeth MA. Photoinhibition of germination in grass seed--implications for prairie revegetation. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2014; 142:1-9. [PMID: 24794519 DOI: 10.1016/j.jenvman.2014.04.007] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/28/2013] [Revised: 03/07/2014] [Accepted: 04/12/2014] [Indexed: 06/03/2023]
Abstract
Germination photoinhibition is not a recognized cause of revegetation failure; yet prolonged sunlight exposure can inhibit germination of several grass species. This research addressed susceptibility to photoinhibition of selected native grass species used to restore Canadian prairies, and reclamation treatments to alter environmental conditions in order to release seeds from photoinhibition. Under laboratory conditions effects of photoinhibition were tested on the ability of seeds to germinate at low water potential and effects of daily alternating temperatures and nitrates to break photoinhibition. Whether surficial mulch can release seeds from photoinhibition was assessed in a field experiment. Germination photoinhibition was evident in Festuca hallii and Koeleria macrantha seeds even under very low irradiances. The prolonged exposure to light decreased germination rates and ability of seeds to germinate at low water potentials. Daily fluctuating temperatures released a fraction of Bromus carinatus and Elymus trachycaulus seeds from photoinhibition yet did not improve F. hallii or K. macrantha germinability. Nitrates failed to break seed photoinhibition in all species tested. In the field experiment, mulched F. hallii seeds (covered with an erosion control blanket) showed a tenfold increase in germination percentages relative to seeds exposed to direct sunlight, indicating the facilitative effects of mulching on attenuation of the light environment. We conclude that germination photoinhibition as a cause of emergence failures in land reclamation where seed is broadcast or shallow seeded should be recognized and germination photoinhibition included in the decision making process to select revegetation seeding techniques.
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Affiliation(s)
- Federico P O Mollard
- Department of Renewable Resources, University of Alberta, 751 GSB, Edmonton, AB T6G 2H1, Canada; Land Reclamation International Graduate School, University of Alberta, 751 GSB, Edmonton, AB T6G 2H1, Canada; Departamento de Biología Aplicada y Alimentos, Facultad de Agronomía, Universidad de Buenos Aires, Av. San Martín 4453, Capital Federal 1417, Argentina.
| | - M Anne Naeth
- Department of Renewable Resources, University of Alberta, 751 GSB, Edmonton, AB T6G 2H1, Canada; Land Reclamation International Graduate School, University of Alberta, 751 GSB, Edmonton, AB T6G 2H1, Canada.
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Woods DP, Ream TS, Minevich G, Hobert O, Amasino RM. PHYTOCHROME C is an essential light receptor for photoperiodic flowering in the temperate grass, Brachypodium distachyon. Genetics 2014; 198:397-408. [PMID: 25023399 PMCID: PMC4174950 DOI: 10.1534/genetics.114.166785] [Citation(s) in RCA: 56] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/02/2014] [Accepted: 07/03/2014] [Indexed: 12/30/2022] Open
Abstract
We show that in the temperate grass, Brachypodium distachyon, PHYTOCHROME C (PHYC), is necessary for photoperiodic flowering. In loss-of-function phyC mutants, flowering is extremely delayed in inductive photoperiods. PHYC was identified as the causative locus by utilizing a mapping by sequencing pipeline (Cloudmap) optimized for identification of induced mutations in Brachypodium. In phyC mutants the expression of Brachypodium homologs of key flowering time genes in the photoperiod pathway such as GIGANTEA (GI), PHOTOPERIOD 1 (PPD1/PRR37), CONSTANS (CO), and florigen/FT are greatly attenuated. PHYC also controls the day-length dependence of leaf size as the effect of day length on leaf size is abolished in phyC mutants. The control of genes upstream of florigen production by PHYC was likely to have been a key feature of the evolution of a long-day flowering response in temperate pooid grasses.
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Affiliation(s)
- Daniel P Woods
- Laboratory of Genetics, University of Wisconsin, Madison, Wisconsin 53706 United States Department of Energy Great Lakes Bioenergy Research Center, University of Wisconsin, Madison, Wisconsin 53706 Department of Biochemistry, University of Wisconsin, Madison, Wisconsin 53706
| | - Thomas S Ream
- United States Department of Energy Great Lakes Bioenergy Research Center, University of Wisconsin, Madison, Wisconsin 53706 Department of Biochemistry, University of Wisconsin, Madison, Wisconsin 53706
| | - Gregory Minevich
- Department of Biochemistry and Molecular Biophysics, Howard Hughes Medical Institute, Columbia University Medical Center, New York, New York 10032
| | - Oliver Hobert
- Department of Biochemistry and Molecular Biophysics, Howard Hughes Medical Institute, Columbia University Medical Center, New York, New York 10032
| | - Richard M Amasino
- Laboratory of Genetics, University of Wisconsin, Madison, Wisconsin 53706 United States Department of Energy Great Lakes Bioenergy Research Center, University of Wisconsin, Madison, Wisconsin 53706 Department of Biochemistry, University of Wisconsin, Madison, Wisconsin 53706
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48
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Wolny E, Braszewska-Zalewska A, Hasterok R. Spatial distribution of epigenetic modifications in Brachypodium distachyon embryos during seed maturation and germination. PLoS One 2014; 9:e101246. [PMID: 25006668 PMCID: PMC4090163 DOI: 10.1371/journal.pone.0101246] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/04/2014] [Accepted: 06/04/2014] [Indexed: 11/18/2022] Open
Abstract
Seed development involves a plethora of spatially and temporally synchronised genetic and epigenetic processes. Although it has been shown that epigenetic mechanisms, such as DNA methylation and chromatin remodelling, act on a large number of genes during seed development and germination, to date the global levels of histone modifications have not been studied in a tissue-specific manner in plant embryos. In this study we analysed the distribution of three epigenetic markers, i.e. H4K5ac, H3K4me2 and H3K4me1 in ‘matured’, ‘dry’ and ‘germinating’ embryos of a model grass, Brachypodium distachyon (Brachypodium). Our results indicate that the abundance of these modifications differs considerably in various organs and tissues of the three types of Brachypodium embryos. Embryos from matured seeds were characterised by the highest level of H4K5ac in RAM and epithelial cells of the scutellum, whereas this modification was not observed in the coleorhiza. In this type of embryos H3K4me2 was most evident in epithelial cells of the scutellum. In ‘dry’ embryos H4K5ac was highest in the coleorhiza but was not present in the nuclei of the scutellum. H3K4me1 was the most elevated in the coleoptile but absent from the coleorhiza, whereas H3K4me2 was the most prominent in leaf primordia and RAM. In embryos from germinating seeds H4K5ac was the most evident in the scutellum but not present in the coleoptile, similarly H3K4me1 was the highest in the scutellum and very low in the coleoptile, while the highest level of H3K4me2 was observed in the coleoptile and the lowest in the coleorhiza. The distinct patterns of epigenetic modifications that were observed may be involved in the switch of the gene expression profiles in specific organs of the developing embryo and may be linked with the physiological changes that accompany seed desiccation, imbibition and germination.
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Affiliation(s)
- Elzbieta Wolny
- Department of Plant Anatomy and Cytology, Faculty of Biology and Environmental Protection, University of Silesia in Katowice, Katowice, Poland
| | - Agnieszka Braszewska-Zalewska
- Department of Plant Anatomy and Cytology, Faculty of Biology and Environmental Protection, University of Silesia in Katowice, Katowice, Poland
| | - Robert Hasterok
- Department of Plant Anatomy and Cytology, Faculty of Biology and Environmental Protection, University of Silesia in Katowice, Katowice, Poland
- * E-mail:
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49
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Hoang HH, Sechet J, Bailly C, Leymarie J, Corbineau F. Inhibition of germination of dormant barley (Hordeum vulgare L.) grains by blue light as related to oxygen and hormonal regulation. PLANT, CELL & ENVIRONMENT 2014; 37:1393-403. [PMID: 24256416 DOI: 10.1111/pce.12239] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/29/2013] [Revised: 11/13/2013] [Accepted: 11/13/2013] [Indexed: 05/24/2023]
Abstract
Germination of primary dormant barley grains is promoted by darkness and temperatures below 20 °C, but is strongly inhibited by blue light. Exposure under blue light at 10 °C for periods longer than five days, results in a progressive inability to germinate in the dark, considered as secondary dormancy. We demonstrate that the inhibitory effect of blue light is reinforced in hypoxia. The inhibitory effect of blue light is associated with an increase in embryo abscisic acid (ABA) content (by 3.5- to 3.8-fold) and embryo sensitivity to both ABA and hypoxia. Analysis of expression of ABA metabolism genes shows that increase in ABA mainly results in a strong increase in HvNCED1 and HvNCED2 expression, and a slight decrease in HvABA8'OH-1. Among the gibberellins (GA) metabolism genes examined, blue light decreases the expression of HvGA3ox2, involved in GA synthesis, increases that of GA2ox3 and GA2ox5, involved in GA catabolism, and reduces the GA signalling evaluated by the HvExpA11 expression. Expression of secondary dormancy is associated with maintenance of high embryo ABA content and a low HvExpA11 expression. The partial reversion of the inhibitory effect of blue light by green light also suggests that cryptochrome might be involved in this hormonal regulation.
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Affiliation(s)
- Hai Ha Hoang
- UR5-EAC 7180 CNRS, PCMP, UPMC Univ Paris 06, Boîte courrier 156, Bat C, 4 place Jussieu, F-75005, Paris, France
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50
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Carrillo-Barral N, Matilla AJ, Rodríguez-Gacio MDC, Iglesias-Fernández R. Nitrate affects sensu-stricto germination of after-ripened Sisymbrium officinale seeds by modifying expression of SoNCED5, SoCYP707A2 and SoGA3ox2 genes. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2014; 217-218:99-108. [PMID: 24467901 DOI: 10.1016/j.plantsci.2013.12.009] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/11/2013] [Revised: 11/18/2013] [Accepted: 12/09/2013] [Indexed: 06/03/2023]
Abstract
The influence of nitrate upon the germination of Sisymbrium officinale seeds is not entirely controlled by after-ripening (AR), a process clearly influenced by nitrate. Recently, we have reported that nitrate affects sensu-stricto germination of non-AR (AR0) seeds by modifying the expression of crucial genes involved in the metabolism of GA and ABA. In this study, we demonstrate that nitrate affects also the germination of AR seeds because: (i) the AR negatively alters the ABA sensitivity being the seed more ABA-sensible as the AR is farthest from optimal (AR0 and AR20 versus AR7); in the presence of diniconazole (DZ), a competitive inhibitor of ABA 8'-hydroxylase, testa rupture is affected while the endosperm rupture is not. (ii) AR7 seed-coat rupture is not inhibited by paclobutrazol (PBZ) suggesting that nitrate can act by a mechanism GA-independent. (iii) The germination process is accelerated by nitrate, most probably by the increase in the expression of SoNCED5, SoCYP707A2 and SoGA3ox2 genes. Taken together, these and previous results demonstrate that nitrate promotes germination of AR and non-AR seeds through transcriptional changes of different genes involved in ABA and GA metabolism.
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Affiliation(s)
- Néstor Carrillo-Barral
- Departamento de Fisiología Vegetal, Facultad de Farmacia, Universidad de Santiago de Compostela, 15782 Santiago de Compostela, Spain
| | - Angel J Matilla
- Departamento de Fisiología Vegetal, Facultad de Farmacia, Universidad de Santiago de Compostela, 15782 Santiago de Compostela, Spain.
| | - María del Carmen Rodríguez-Gacio
- Departamento de Fisiología Vegetal, Facultad de Farmacia, Universidad de Santiago de Compostela, 15782 Santiago de Compostela, Spain
| | - Raquel Iglesias-Fernández
- Centro de Biotecnología y Genómica de Plantas (UPM-INIA), ETSI Agrónomos, Universidad Politécnica de Madrid, Campus de Montegancedo, 28223 Pozuelo de Alarcón, Madrid, Spain
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