General method for determining anaerobic biodegradation potential

Efficient biostimulation of microbial dechlorination of polychlorinated biphenyls by acetate and lactate under nitrate reducing conditions: Insights into dechlorination pathways and functional genes

Microbial-catalyzed reductive dechlorination of polychlorinated biphenyls (PCBs) is largely affected by the indigenous sediment geochemical properties. In this study, the effects of nitrate on PCB dechlorination and microbial community structures were first investigated in Taihu Lake sediment microcosms. And biostimulation study was attempted supplementing acetate/lactate. PCB dechlorination was apparently inhibited under nitrate-reducing conditions. Lower PCB dechlorination rate and less PCB dechlorination extent were observed in nitrate amended sediment microcosms (T-N) than those in non-nitrate amended microcosms (T-1) during 66 weeks of incubation. The total PCB mass reduction in T-N was 17.6% lower than that in T-1. The flanked-para dechlorination was completely inhibited, while the ortho-flanked meta dechlorination was only partially inhibited in T-N. The 7.5 mM of acetate/lactate supplementation recovered PCB dechlorination by resuming ortho-flanked meta dechlorination. Repeated additions of lactate showed more effective biostimulation than acetate. Phylum Chloroflexi, containing most known PCB dechlorinators, was found to play a vital role on stability of the network structures. In T-N, putative dechlorinating Chloroflexi, Dehalococcoides and RDase genes rdh12, pcbA4, pcbA5 all declined. With acetate/lactate supplementation, Dehalococcoides grew by 1-2 orders of magnitude and rdh12, pcbA4, pcbA5 increased by 1-3 orders of magnitude. At Week 66, parent PCBs declined by 86.4% and 80.9% respectively in T-N-LA and T-N-AC compared to 69.9% in T-N. These findings provide insights into acetate/lactate biostimulation as a cost-effective approach for treating PCB contaminated sediments undergoing nitrate inhibition.

Impact of dewatering inorganic coagulants on anaerobic digestion treating food waste leachate

Anaerobic digestion of food waste leachate (FWL) provides a viable solution for waste treatment and energy production. Returning solids from digested sludge to the reactor maintains a high microbial concentration and enhances digestion efficiency. However, this requires coagulants because the digestate has low dewaterability. This study analyzed methane production and microbial communities using biochemical methane potential tests for inorganic coagulants (AlCl3, Al2(SO4)3, FeCl3, and Fe2(SO4)3) in FWL treatment. Cumulative methane production was the highest in the control and decreased in the order of Fe2(SO4)3, AlCl3, FeCl3, and Al2(SO4)3. Iron ions inhibited H2S production while aluminum ions increased it compared to the control group. Despite the absence of significant changes in microbial communities following coagulant injection, a substantial increase in damaged cells was observed. These findings highlight the intricate repercussions of coagulant introduction in anaerobic digestion, emphasizing notable alterations in methane production dynamics and the integrity of microbial cells.

Evaluation of a sequential anaerobic-aerobic membrane bioreactor system for treatment of traditional and insensitive munitions constituents

New energetic formulations containing insensitive high explosives (IHE), such as 2,4-dinitroanisole (DNAN), 3-nitro-1,2,4-triazole-5-one (NTO), and nitroguanidine (NQ) are being developed to provide safer munitions. The addition of IHE to munitions formulations results in complex wastewaters from explosives manufacturing, load and pour operations and demilitarization activities. New technologies are required to treat those wastewaters. The core objective of this research effort was to develop and optimize a dual anaerobic-aerobic membrane bioreactor (MBR) system for treatment of wastewater containing variable mixtures of traditional energetics, IHE, and anions. The combined system proved highly effective for treatment of traditional explosives (TNT, RDX, HMX), IHE (DNAN, NTO, NQ) and anions commonly used as military oxidants (ClO4-, NO3-). The anaerobic MBR, which was operated for more than 500 d, was observed to completely degrade mg L-1 concentrations of TNT, DNAN, ClO4- and NO3- under all operational conditions, including at the lowest hydraulic residence time (HRT) tested (2.2 d). The combined system generally resulted in complete treatment of mg L-1 concentrations of RDX and HMX to <20 μg L-1, with most of the degradation occurring in the anaerobic MBR and polishing in the aerobic system. No common daughter products of DNAN, TNT, RDX, or HMX were detected in the effluent. NTO was completely transformed in the anaerobic MBR, but residual 3-amino-1,2,4-triazole-5-one (ATO) was detected in system effluent. The ATO rapidly decomposed when bleach solution was added to the final effluent. NQ was initially recalcitrant in the system, but microbial populations eventually developed that could degrade >90% of the ∼10 mg L-1 NQ entering the anaerobic MBR, with the remainder degraded to <50 μg L-1 in the aerobic system. The dual MBR system proved to be capable of complete degradation of a wide mixture of munitions constituents and was resilient to changing influent composition.

Short-chain fatty acids facilitated long-term dechlorination of PCBs in Taihu Lake sediment microcosms: Evidence from PCB congener and microbial community analyses

Microbial reductive dechlorination hosts great promise as an in situ bioremediation strategy for polychlorinated biphenyls (PCBs) contamination. However, the slow dechlorination in sediments limits natural attenuation. Short-chain fatty acids, as preferred carbon sources and electron donors for dechlorinating microorganisms, might stimulate PCB dechlorination. Herein, two sets of short-chain fatty acids, sole acetate and a fatty acid mixture (acetate, propionate, and butyrate), were amended periodically into Taihu Lake (China) sediment microcosms containing nine PCB congeners (PCB5, 12, 64, 71, 105, 114, 149, 153, and 170) after 24 weeks of incubation. Short-chain fatty acids facilitated the long-term PCB dechlorination and the promoting effect of the fatty acid mixture compared favorably with that of sole acetate. By the end of 108 weeks, the total PCB mass concentrations in acetate amended and fatty acid mixture amended microcosms significantly declined by 7.6% and 10.3% compared with non-amended microcosms (P < 0.05), respectively. Short-chain fatty acids selectively favored the removal of flanked meta and single-flanked para chlorines. Notably, a rare ortho dechlorination pathway, PCB25 (24-3-CB) to PCB13 (3-4-CB), was enhanced. Supplementary fatty acids significantly increased reductive dehalogenases (RDase) gene pcbA5 instead of improving the growth of Dehalococcoides. These findings highlight the merits of low cost short-chain fatty acids on in situ biostimulation in treating PCBs contamination.

Genome-Resolved Metagenomics and Metatranscriptomics Reveal Insights into the Ecology and Metabolism of Anaerobic Microbial Communities in PCB-Contaminated Sediments

Growth of organohalide-respiring bacteria such as Dehalococcoides mccartyi on halogenated organics (e.g., polychlorinated biphenyls (PCBs)) at contaminated sites or in enrichment culture requires interaction and support from other microbial community members. To evaluate naturally occurring interactions between Dehalococcoides and key supporting microorganisms (e.g., production of H2, acetate, and corrinoids) in PCB-contaminated sediments, metagenomic and metatranscriptomic sequencing was conducted on DNA and RNA extracted from sediment microcosms, showing evidence of both Dehalococcoides growth and PCB dechlorination. Using a genome-resolved approach, 160 metagenome-assembled genomes (MAGs), including three Dehalococcoides MAGs, were recovered. A novel reductive dehalogenase gene, distantly related to the chlorophenol dehalogenase gene cprA (pairwise amino acid identity: 23.75%), was significantly expressed. Using MAG gene expression data, 112 MAGs were assigned functional roles (e.g., corrinoid producers, acetate/H2 producers, etc.). A network coexpression analysis of all 160 MAGs revealed correlations between 39 MAGs and the Dehalococcoides MAGs. The network analysis also showed that MAGs assigned with functional roles that support Dehalococcoides growth (e.g., corrinoid assembly, and production of intermediates required for corrinoid synthesis) displayed significant coexpression correlations with Dehalococcoides MAGs. This work demonstrates the power of genome-resolved metagenomic and metatranscriptomic analyses, which unify taxonomy and function, in investigating the ecology of dehalogenating microbial communities.

Growth Media Efficacy in Biochemical Methane Potential Assays

The Biochemical Methane Potential (BMP) assay is a vital tool for quantifying the amount of methane that specific biodegradable materials can generate in landfills and similar anaerobic environments. Applications of the protocol are extensive and while simple in design, the BMP assay can use anaerobic seed from many different types of sources to determine the methane potential from most biodegradable substrates. Many researchers use differing protocols for this assay, both including and excluding the use of synthetic growth medias, intended to provide vital nutrients and trace elements that facilitate methanogenesis and leave the substrate being tested as the only limiting factor in methane generation potential. The variety of previous approaches inspired this effort to determine the efficacy of adding synthetic growth media to BMP assays. The presented findings suggest the use of M-1 synthetic growth media, defined in this study, at a volumetric ratio of 10% active sludge: 90% M-1 media yielded optimal results in terms of gas yield and reduced variability.

Lead or cadmium co-contamination alters benzene and toluene degrading bacterial communities

Co-contamination of hydrocarbons with heavy metals in soils often complicates and hinders bioremediation. A comprehensive characterization of site-specific degraders at contaminated sites can help determine if in situ bioremediation processes are sufficient. This study aimed to identify differences in benzene and toluene degradation rates and the microbial communities enriched under aerobic conditions when different concentrations of Cd and Pb are introduced. Microcosms were used to study the degradation of 0.23 mM benzene or 0.19 mM toluene under various concentrations of Pb (up to 240 µM) and Cd (up to 440 µM). Soil collected from a stormwater retention basin receiving runoff from a large parking lot was utilized to seed the microcosms. The hydrocarbon degradation time and rates were measured. After further rounds of amendment and degradation of benzene and toluene, 16S rRNA gene amplicon sequencing and quantitative PCR were used to ascertain the microbial communities enriched under the various concentrations of the heavy metals. The initial degradation time for toluene and benzene was 7 to 9 days and 10 to 13 days, respectively. Degradation rates were similar for each hydrocarbon despite the concentration and presence of metal co-contaminant, however, the enriched microbial communities under each condition differed. Microcosms without metal co-contaminant contained a diversity of putative benzene and toluene degrading bacteria. Cd strongly reduced the richness of the microbial communities. With higher levels of heavy metals, genera such as Ralstonia, Cupriavidus, Azoarcus, and Rhodococcus became more dominant under various conditions. The study finds that highly efficient benzene- and toluene-degrading consortia can develop under variations of heavy metal co-contamination, but the consortia are dependent on the heavy metal type and concentrations.

Degradation of high-strength acrylic acid wastewater with anaerobic granulation technology: A mini-review

The anaerobic granulation technology has been successfully applied full-scale for treating high-strength recalcitrant acrylic acid wastewater. This mini-review highlighted the recalcitrance of acrylic acid and its biological degradation pathways. And then, the full-scale practices using anaerobic granulation technology for acrylic wastewater treatment were outlined. The granules are proposed to provide barriers for high-concentration acrylic acid to the embedded anaerobic microbes, maintaining its high degradation rate without apparent substrate inhibition. Based on this proposal, the prospects of applying anaerobic granulation technology to handle a wide range of high-strength recalcitrant wastewaters, to improve the current process performances, and to recover renewable resources were delineated. The anaerobic granulation for high-strength recalcitrant wastewater treatment is an emergent technology that can assist in fulfilling the appeals of the circular bioeconomy of modern society.

Increasing Anaerobic Digestion Efficiency Using Food-Waste-Based Biochar

The efficiency of methane production by anaerobic digestion (AD), during which energy is generated from organic waste, can be increased in various ways. Recent research developments have increased the volume of gas production during AD using biochar. Previous studies have used food waste itself in AD, or, added wood-biochar or sewage sludge charcoal as an accelerant of the AD process. The application of food-waste biochar in AD using activated sludge has not yet been studied and is considered a potential method of utilizing food waste. Therefore, this study investigated the use of biochar prepared by the thermal decomposition of food waste as an additive to AD tanks to increase methane production. The addition of food-waste biochar at 1% of the digestion tank volume increased the production of digestion gas by approximately 10% and methane by 4%. We found that food-waste biochar served as a medium with trace elements that promoted the proliferation of microorganisms and increased the efficiency of AD.

Combined read- and assembly-based metagenomics to reconstruct a Dehalococcoides mccartyi genome from PCB-contaminated sediments and evaluate functional differences among organohalide-respiring consortia in the presence of different halogenated contaminants

Microbial communities that support respiration of halogenated organic contaminants by Dehalococcoides sp. facilitate full-scale bioremediation of chlorinated ethenes and demonstrate the potential to aid in bioremediation of halogenated aromatics like polychlorinated biphenyls (PCBs). However, it remains unclear if Dehalococcoides-containing microbial community dynamics observed in sediment-free systems quantitatively resemble that of sediment environments. To evaluate that possibility we assembled, annotated, and analyzed a Dehalococcoides sp. metagenome-assembled genome (MAG) from PCB-contaminated sediments. Phylogenetic analysis of reductive dehalogenase gene (rdhA) sequences within the MAG revealed that pcbA1 and pcbA4/5-like rdhA were absent, while several candidate PCB dehalogenase genes and potentially novel rdhA sequences were identified. Using a compositional comparative metagenomics approach, we quantified Dehalococcoides-containing microbial community structure shifts in response to halogenated organics and the presence of sediments. Functional level analysis revealed significantly greater abundances of genes associated with cobamide remodeling and horizontal gene transfer in tetrachloroethene-fed cultures as compared to halogenated aromatic-exposed consortia with or without sediments, despite little evidence of statistically significant differences in microbial community taxonomic structure. Our findings support the use of a generalizable comparative metagenomics workflow to evaluate Dehalococcoides-containing consortia in sediments and sediment-free environments to eludicate functions and microbial interactions that facilitate bioremediation of halogenated organic contaminants.

Valorization of petroleum refinery oil sludges via anaerobic co-digestion with food waste and swine manure

Valorization of oil sludge has been gaining attention to improve the sustainability of the petroleum industry. This study aimed to assess the possibility of anaerobic co-digestion of oil scum and secondary sludge with food waste (or swine manure). Oil scum and secondary sludge were obtained from a wastewater treatment plant (WWTP) of a petrochemical plant. Physicochemical properties, hazardous materials, and microbial community were characterized and biochemical methane potential was performed by a simplex-lattice mixture design. More than 87% (wet wt.) of the oil scum consisted of total petroleum hydrocarbons (TPHs) (21,762 mg/L) that are difficult to be degraded by anaerobes. The secondary sludge showed low TPHs (5 mg/L) and a bacterial community similar to that of municipal WWTPs. The heavy metal (Cu, As, Cr, Ni, Mn, Zn, and V) concentrations in the oil scum and secondary sludge were similar (20-600 mg/L). The maximum methane potentials of the oil sludge and secondary sludges were 20 ± 2 and 56 ± 3 mL CH₄/g-volatile solid, respectively. The co-digestion with food waste or swine manure led to a synergy effect on methane production of the co-digestion substrate (10-40% increase compared to the calculated value; v/v) by balancing the C/N ratio. Due to the high TPH contents, oil scum is not appropriate for co-digestion. The co-digestion of secondary sludge with food waste and/or swine manure is recommended. It is necessary to consider whether the concentration of heavy metals is at a level that inhibits the anaerobic co-digestion depending on the operating conditions such as mixing ratios and solid contents.

Effects of Sludge Concentration and Disintegration/Solubilization Pretreatment Methods on Increasing Anaerobic Biodegradation Efficiency and Biogas Production

It is urgent to determine suitable municipal sludge treatment solutions to simultaneously minimize the environmental negative impacts and achieve sustainable energy benefits. In this study, different sludge pretreatment techniques were applied and investigated to enhance the sludge solubility and, subsequently, facilitate the anaerobic biodegradation performance of the mixed sludge under different sludge concentrations and pretreatment techniques. The sludge characteristics before and after pretreatment and batch experiments of anaerobic digestion of sludge samples under different conditions were analyzed and discussed. The results showed that the mechanical pretreatment method, alone and in combination with low-temperature heat treatment, significantly improved the sludge solubility, with the highest solubility at 39.23%. The maximum biomethane yield achieved was 0.43 m3/kg after 10 d of anaerobic digestion of a 3% sludge sample subjected to mechanical and thermal pretreatment prior to anaerobic biodegradation. In comparison, it took more than 28 d to achieve the same biomethane production with the unpretreated sludge sample. Mechanical pretreatment and subsequent heat treatment showed a high ability to dissolve sludge and, subsequently, accelerate anaerobic digestion, thereby providing promising prospects for increasing the treatment capacity of existing and new sludge treatment plants.

Effects of iron-carbon materials on microbial-catalyzed reductive dechlorination of polychlorinated biphenyls in Taihu Lake sediment microcosms: Enhanced chlorine removal, detoxification and shifts of microbial community

Nano zero-valent iron particles (nZVI, 0.09 wt%), micro zero-valent iron particles (mZVI, 0.09 wt%), granular activated carbon (GAC, 3.03 wt%), GAC supported nZVI (nZVI/GAC, 3.12 wt%) and nZVI&GAC (nZVI 0.09 wt%, GAC 3.03 wt%) were evaluated for their effects on polychlorinated biphenyls (PCBs) anaerobic reductive dechlorination, detoxification, as well as microbial community structure in Taihu Lake (China) sediment microcosms. The results showed that all of these five materials could stimulate PCBs reductive dechlorination, especially for dioxin-like PCB congeners, and nZVI&GAC had the best removal effect on PCBs. The reduction of total PCBs increased from 13.5% to 33.2%. H₂ generated by zero-valent iron corrosion was utilized by organohalide-respiring bacteria (OHRB) to enhance the dechlorination of PCBs predominantly via meta chlorine removal in the short term. The addition of ZVI had little impact on the total bacterial abundance and the microbial community structure. The adsorption of GAC and potential bioremediation properties of attached biofilm could promote the long-term removal of PCBs. GAC, nZVI/GAC, nZVI&GAC had different influences on the microbial structure. These findings provide insights into the biostimulation technique for in situ remediations of PCBs contaminated sediments.

New insights into the evaluation of anaerobic properties of sludge: Biodegradability and stabilization

Evaluating anaerobic biodegradability of sludge and then identifying the stabilization of digestate is necessary in sludge treatment and disposal. 48 sludge samples from 24 typical waste water treatment plants (WWTPs) in 11 provinces in China were selected to investigate the relationship between Biochemical Acidogenic Potential (BAP) test and Biochemical Methane Potential (BMP) test. The volatile fatty acid (VFA) production obtained from BAP tests was found linearly related to the ultimate methane production from corresponding BMP tests. Satisfying results were obtained with Pearson correlation coefficient as 0.929 and R² value as 0.76. Furthermore, the physio-chemical characteristics (FCI, SUVA₂₅₄, E₄/E₆) of supernatant, which were associated with humic-like substances (HS), were investigated before and after BMP tests. Through which a new criterion (FCI>1.50, SUVA₂₅₄>1.10, E₄/E₆<4.0) was proposed to evaluate the stabilization level of anaerobic digested sludge.

Long-term enrichment of anaerobic propionate-oxidizing consortia: Syntrophic culture development and growth optimization

Propionate is a quantitatively important methanogenic intermediate in anaerobic digesters and only limited number of microbes can utilize it under syntrophic association with methanogens. The syntrophic propionate oxidizing bacterias are known to be slow growers due to the low energy yield. Thus, propionate get accumulated frequently in anaerobic digesters and it negatively affect digester performance. In this study, propionate degrading consortia from four different seeding sources were enriched in sequential bath mode in two phases; first adaption phase with 1 g/L of propionate concentration and later, high-strength phase with 3 g/L. From 16s rRNA gene based metagenomics analysis of the former phase, four syntrophic microbial groups, Syntrophaceae, Syntrophomonadaceae, Methanobacterium and Methanosaeta were found to be dominant with complete degradation of propionate. The substrate accelerated microbial shifts were observed at high-strength phase with significant decrease of Syntrophaceae up to 26.9 %. Using Response Surface Methodology, pH 6.8-6.9 and temperature 34.5-34.9 °C were found to be optimum growth conditions for the propionate degradation culture. Observed results could be useful to improve degradation efficiencies and obtained enriched culture can be used to recover propionate-accumulated digesters by bio-augmentation.

Impact of hydrothermal pretreatment on anaerobic digestion efficiency for lignocellulosic biomass: Influence of pretreatment temperature on the formation of biomass-degrading byproducts

Anaerobic digestion (AD) of lignocellulosic biomass is appealing because of the abundance and ease of obtaining the biomass locally. However, the recalcitrance of lignocellulosic biomass presents an obstacle in the hydrolysis step of AD and lowers the process efficiency. In this study, sunflower, which is a model lignocellulosic biomass, was pretreated by thermal (hydrothermal pretreatment, HTP) and non-thermal (milling) methods; the methane yield and biodegradability of the pretreated biomass were determined using a series of batch tests. The thermal pretreatment method showed a significantly higher methane yield (213.87-289.47 mL g^-1 VS) and biodegradability (43-63%) than those of the non-thermally pretreated biomass, and the optimum pretreatment effect was observed at an HTP temperature of 180 °C. However, at an HTP temperature exceeding 200 °C, the induced formation of 5-hydroxymethylfurfural and furfural significantly lowered the methane yield and biodegradability. This study revealed that the HTP temperature is closely related to the formation of lignocellulosic biomass-degrading byproducts, which potentially hinder the methanogenesis step in AD; severe HTP conditions may have the opposite effect on the AD performance of lignocellulosic biomass.

Interactions between substrate characteristics and microbial communities on biogas production yield and rate

In this study, leather fleshing waste (LFW) and a complementary substrate (food waste leachate; FWL) were co-digested. The main focus of research was to study effects on biogas production caused by interactions between co-substrates when combined in different mixing ratios and changes on microbial community structures. Due to a positive effect of co-digestion (i.e., establishing nutrient equilibrium), the adjusted substrates for optimum C/N ratio by blending LFW and FWL resulted in significantly higher biodegradability and biomethane production (375.5-520.8 mL CH₄ g^-1 VS) than the mono-digestion of each substrate. According to co-digestion of LFW and FWL, microbial communities became more diverse and the changes of microbial structure influenced the biomethane production performance. Among the co-digesting conditions, the biomethane production yield and rate of the samples were in reverse order and the results were firmly associated with the relative richness of lipids (yield-related) and proteins (rate-related) in the co-substrates.

Metagenome-Guided Proteomic Quantification of Reductive Dehalogenases in the Dehalococcoides mccartyi-Containing Consortium SDC-9

At groundwater sites contaminated with chlorinated ethenes, fermentable substrates are often added to promote reductive dehalogenation by indigenous or augmented microorganisms. Contemporary bioremediation performance monitoring relies on nucleic acid biomarkers of key organohalide-respiring bacteria, such as Dehalococcoides mccartyi (Dhc). Metagenome sequencing of the commercial, Dhc-containing consortium, SDC-9, identified 12 reductive dehalogenase (RDase) genes, including pceA (two copies), vcrA, and tceA, and allowed for specific detection and quantification of RDase peptides using liquid chromatography coupled with tandem mass spectrometry (LC-MS/MS). Shotgun (i.e., untargeted) proteomics applied to the SDC-9 consortium grown with tetrachloroethene (PCE) and lactate identified 143 RDase peptides, and 36 distinct peptides that covered greater than 99% of the protein-coding sequences of the PceA, TceA, and VcrA RDases. Quantification of RDase peptides using multiple reaction monitoring (MRM) assays with ¹³C-/¹⁵N-labeled peptides determined 1.8 × 10³ TceA and 1.2 × 10² VcrA RDase molecules per Dhc cell. The MRM mass spectrometry approach allowed for sensitive detection and accurate quantification of relevant Dhc RDases and has potential utility in bioremediation monitoring regimes.

Enhancing anaerobic oxidation of methane in municipal solid waste landfill cover soil

Landfills are the third largest anthropogenic source of the greenhouse gas methane worldwide. In the upper portions of landfill covers, methane is oxidized aerobically by microorganisms to form the less-potent greenhouse gas carbon dioxide; however, because of the low permeability of oxygen, no aerobic oxidation occurs in deeper portions of the cover. Therefore, the goal of this study was to enhance anaerobic oxidation of methane (AOM) in the deeper parts of landfill covers, to increase overall methane removal, via addition of electron acceptors besides oxygen. In batch tests, landfill cover soil was amended using five alternate electron acceptors: iron(III), nitrate, nitrite, sulfate, and manganese. AOM was then measured via column tests, which included realistic conditions of gas flow, cover thickness, and compaction. In the batch tests, soils amended with nitrate, sulfate, and the combination of sulfate + hematite removed more methane compared to control soil. Methane generation inhibitor had no impact on net methane removal. Adding nutrients to the soil significantly enhanced methane removal only for the case of soil without electron acceptors. Greater methane removal was observed for reactors with higher initial methane concentration. Results of the column tests showed that soil amended with sulfate + iron had the highest (around 10%) removal of methane in the anoxic zone, followed by soil amended with sulfate. Hydrogen sulfide (H₂S) gas was measured in the headspace of these two columns, which indicated that sulfate-reducing bacteria were likely responsible for methane removal.

Growth of Dehalococcoides spp. and increased abundance of reductive dehalogenase genes in anaerobic PCB-contaminated sediment microcosms

Polychlorinated biphenyls (PCBs) contaminate 19% of US Superfund sites and represent a serious risk to human and environmental health. One promising strategy to remediate PCB-contaminated sediments utilizes organohalide-respiring bacteria (OHRB) that dechlorinate PCBs.However, functional genes that act as biomarkers for PCB dechlorination processes (i.e., reductive dehalogenase genes) are poorly understood. Here, we developed anaerobic sediment microcosms that harbor an OHRB community dominated by the genus Dehalococcoides. During the 430-day microcosm incubation, Dehalococcoides 16S rRNA sequences increased two orders of magnitude to 10⁷ copies/g of sediment, and at the same time, PCB118 decreased by as much as 70%. In addition, the OHRB community dechlorinated a range of penta- and tetra-chlorinated PCB congeners including PCBs 66, 70 + 74 + 76, 95, 90 + 101, and PCB110 without exogenous electron donor. We quantified candidate reductive dehalogenase (RDase) genes over a 430-day incubation period and found rd14, a reductive dehalogenase that belongs to Dehalococcoides mccartyi strain CG5, was enriched to 10⁷ copies/g of sediment. At the same time, pcbA5 was enriched to only 10⁵ copies/g of sediment. A survey for additional RDase genes revealed sequences similar to strain CG5's rd4 and rd8. In addition to demonstrating the PCB dechlorination potential of native microbial communities in contaminated freshwater sediments, our results suggest candidate functional genes with previously unexplored potential could serve as biomarkers of PCB dechlorination processes.

Diverse dechlorinators and dechlorination genes enriched through amendment of chlorinated natural organic matter fractions

In uncontaminated environments, chlorinated natural organic matter (Cl-NOM) can act as an electron acceptor for organohalide-respiring bacteria. It is unknown, however, whether different types of Cl-NOM are preferentially dechlorinated or whether enrichment with Cl-NOM affects the ability of bacteria to dechlorinate contaminants. In this research NOM was extracted from sediment, fractionated based on hydrophobicity, and either amended to polychlorinated biphenyl-contaminated soil directly or chlorinated and then amended to soil. Amendments of the least hydrophobic Cl-NOM fraction were dechlorinated most rapidly, followed by the moderately hydrophobic Cl-NOM fraction. Soil that had been enriched on the moderately hydrophobic fraction of Cl-NOM was also capable of faster dechlorination of the contaminants trichloroethene and tetrachlorobenzene. Community analysis of the soil during enrichment showed that some known organohalide-respiring bacteria were present and may have played a role in dechlorination; nevertheless, many bacteria appeared to be enriched during both Cl-NOM and contaminant dechlorination. In addition, the quantities of two haloalkane dehalogenase genes increased during enrichment on Cl-NOM. These results show for the first time that Cl-NOM can prime contaminant dechlorination and also suggest that hydrolytic dechlorination processes were involved in both Cl-NOM and contaminant dechlorination.

Evaluation of Anaerobic Co-Digestion to Enhance the Efficiency of Livestock Manure Anaerobic Digestion

In this paper, the anaerobic co-digestion of three different organic wastes, including livestock manure, slaughterhouse waste, and agricultural by-products (ABs), was carried out to enhance the efficiency of mono-digestion of livestock manure. The characteristics of co-digestion were evaluated at different mixing ratios. The experiment was performed using the Batch test and was divided into two parts. The first experimental section (EXP. 1) was designed to evaluate the seasonal characteristics of ABs, which are the different ratios of fruits and vegetables, where the mixing ratio of spring (fruits:vegetables = 3:7) showed the highest biogas yield (0.24 m3/kg volatile solids). The second experiment (EXP. 2) was conducted by using ABs in the ratio that gave the highest biogas yield in EXP. 1 in combinations of three wastes livestock manure, slaughterhouse waste, and ABs. The highest CH4 yield was 0.84 m3/kg volatile solids (VS), which was obtained with a mixing ratio that had even amounts of the three feedstocks. In addition, the results of the second biochemical methane potential test, which assessed the digestive efficiency according to the mixing ratio of the three types of organic waste, showed that the CH4 production rate of the merged digestion was approximately 1.03–1.29 times higher than that of the mono-digestion of livestock manure. The results of our experiment were verified using the modified Gompertz model, the results of which were relatively similar to the experimental results.

Aqueous film forming foam and associated perfluoroalkyl substances inhibit methane production and Co-contaminant degradation in an anaerobic microbial community

Aqueous film forming foams (AFFF) can contain gram per liter concentrations of per- and polyfluoroalkyl substances (PFAS) and are often released in large quantities directly to the environment as they are used to fight fires. AFFF composition is complex and contains many unknown PFAS in addition to ingredients such as hydrocarbons, solvents, and corrosion inhibitors. While biological effects of single PFAS have been studied, the effects of PFAS-containing mixtures, such as AFFF, are unknown. The effect of PFAS on microorganisms is also not well understood; nevertheless, we rely on microorganisms in locations containing elevated PFAS concentrations to perform certain functions, such as carbon cycling and co-contaminant degradation. This study focused on determining the functional consequences of AFFF and PFAS exposure in a microbial community in both the presence and the absence of a co-contaminant. AFFF, select PFAS, and a PFAS mixture were tested to determine the effect of AFFF on an anaerobic microbial community and the characteristics of the PFAS that drive toxicity in such mixtures. To study this, anaerobic digester communities were exposed to PFAS and a co-contaminant (2,4-dichlorophenol, DCP); methane production, as an indicator of toxicity and the community's ability to cycle carbon, and co-contaminant degradation were monitored. Results showed that PFAS and AFFF can alter the toxicity of DCP, inhibit DCP degradation, decrease the number of methanogens present, and change the microbial community structure. DCP was also able to decrease the toxicity of the PFAS perfluorooctane sulfonate (PFOS), possibly by changing the sorption of PFOS to the microorganisms present. Additionally, it was determined that while PFOS was responsible for AFFF toxicity, no single PFAS or simple PFAS mixture accurately accounted for the inhibition of DCP degradation caused by AFFF exposure.

Reduction in sulfate inhibition of microbial dechlorination of polychlorinated biphenyls in Hudson and Grasse River sediments through fatty acid supplementation

Microbial dechlorination of polychlorinated biphenyls (PCBs) in aquatic sediments may reduce the need for dredging for remediation. To better understand this biotransformation route under different geochemical conditions, the influence of sulfate on dechlorination in sediments from the Hudson River and the Grasse River spiked with two PCB mixtures (PCB 5/12, 64/71, 105/114 and 149/153/170 in Mixture 1 and PCB 5/12, 64/71, 82/97/99, 144/170 in Mixture 2) was investigated. The results showed that PCB dechlorination was partially inhibited in the sulfate-amended sediment microcosms. The rate, extent and preference of dechlorination were mainly controlled by the indigenous differences (sulfate, carbon content etc.) in sediment, but also affected by the PCB mixture composition. An increase of Dehalococcoides 16S rRNA genes coincided with the resumption of dechlorination. Dechlorination preferences were identified using a modified dechlorination pathway analysis approach. The low carbon content and high background sulfate Hudson sediment exhibited more para dechlorination targeting flanked para chlorines. The high carbon content and low background sulfate Grasse sediment preferentially removed more para-flanked meta chlorines than flanked para chlorines. The supplementation of fatty acids (acetate or a mixture of acetate, propionate and butyrate) dramatically increased PCB dechlorination in the Grasse sediment by resuming ortho-flanked meta dechlorination. Rare ortho removals were found in the Grasse sediment after adding fatty acids. This study suggests that supplementary fatty acids might be used to stimulate PCB dechlorination under sulfate reducing conditions, but the effectiveness largely depends on sediment geochemistry.

Presence, Diversity, and Enrichment of Respiratory Reductive Dehalogenase and Non-respiratory Hydrolytic and Oxidative Dehalogenase Genes in Terrestrial Environments

Organohalide-respiring bacteria have been linked to the cycling and possible respiration of chlorinated natural organic matter (Cl-NOM) in uncontaminated soils and sediments. The importance of non-respiratory hydrolytic/oxidative dechlorination processes in the cycling of Cl-NOM in terrestrial soil and sediment, however, is still not understood. This research analyzes the dechlorination potential of terrestrial systems through analysis of the metagenomes of urban lake sediments and cultures enriched with Cl-NOM. Even with the variability in sample type and enrichment conditions, the potential to dechlorinate was universal, with reductive dehalogenase genes and hydrolytic or oxidative dehalogenase genes found in all samples analyzed. The reductive dehalogenase genes detected grouped taxonomically with those from organohalide-respiring bacteria with broad metabolic capabilities, as opposed to those that obligately respire organohalides. Furthermore, reductive dehalogenase genes and two haloacid dehalogenase genes increased in abundance when sediment was enriched with high concentrations of Cl-NOM. Our data suggests that both respiratory and non-respiratory dechlorination processes are important for Cl-NOM cycling, and that non-obligate organohalide-respiring bacteria are most likely involved in these processes.

Systematic error in manometric measurement of biochemical methane potential: Sources and solutions

This work focused on identification and quantification of systematic sources of error in manometric measurement of biochemical methane potential (BMP). Error was determined by comparison to gravimetric measurements and direct measurement of leakage. One out of three types of septa leaked above 1 bar (gauge) headspace pressure, losing 25 to 30% of biogas produced. But manometric BMP showed a negative bias even in the absence of leakage. Maximum error was 24% from 160 mL bottles with 40 mL of headspace (headspace fraction of 0.25). Error decreased with increasing headspace fraction, and was small (3%) for a headspace fraction of 0.75, showing that a high headspace volume is the best approach for minimizing error. Relative error in CH₄ production measurement increased with headspace pressure as well, but controlling pressure alone is not sufficient for minimizing error. Calculations showed that observed error may be due to volatilization of CH₄ during venting as well as inaccurate headspace volume determination, although these sources do not completely explain the magnitude of error observed. Measurement of biogas composition before and after venting showed that CO₂ volatilization can occur, but is probably a minor source of error. Calculations showed that error in estimation of ambient pressure or headspace temperature had only minor effects (<3%). Gravimetric measurements, which were unaffected by leakage and insensitive to error in estimation of headspace pressure, temperature or volume, can provide a simple check on manometric results, or a complete replacement.

Biochemical Methane Potential (BMP) Assay Method for Anaerobic Digestion Research

Biochemical methane potential (BMP) tests are widely used for characterizing a substrate’s influence on the anaerobic digestion process. As of 2018, there continues to be a lack of standardization of units and techniques, which impacts the comparability and validity of BMP results. However, BMP methods continue to evolve, and key aspects are studied to further eliminate systematic errors. This paper aims to update these key aspects with the latest research progress both to introduce the importance of each variable to those new to BMP measurements and to show the complexity required to design an accurate BMP test.

Thermophilic anaerobic digestion of model organic wastes: Evaluation of biomethane production and multiple kinetic models analysis

The main aim of this work was to test various organic wastes, i.e. from a livestock farm, a cattle slaughterhouse and agricultural waste streams, for its ability to produce methane under thermophilic anaerobic digestion (AD) conditions. The stability of the digestion, potential biomethane production and biomethane production rate for each waste were assessed. The highest methane yield (110.83 mL CH₄/g VS_added day) was found in the AD of crushed animal carcasses on day 4. The experimental results were analyzed using four kinetic models and it was observed that the Cone model described the biomethane yield as well as the methane production rate of each substrate. The results from this study showed the good potential of model organic wastes to produce biomethane.

Anaerobic digestion as an alternative disposal for phytoremediated biomass from heavy metal contaminated sites

It is desirable to establish an environmentally benign platform for disposing biomass from the phytoremediation process while recovering energy is of importance. To this end, the biochemical methane potential (BMP) tests were conducted using four different biomass samples (i.e., sunflower: Helianthus annuus) that were obtained from the different remediation sites. In particular, this study laid great emphasis on evaluating the inhibition for the anaerobic digestion (AD) process induced by endogenous heavy metal (Cd, Cu, Ni, Pb, and Zn) content in biomass. Despite the high levels of heavy metal contents (Cd: 58.4, Cu: 23.0, Ni: 2.01, Pb: 9.88, and Zn: 146 mg kg^-1) in the substrate for the AD process, the overall performance was comparable relative to the case of the references. Therefore, this study signified that the inhibition derived from heavy metals was nearly negligible, which suggested that biomass from the phytoremediation site could be used as a substrate for the AD process.

Effects of Ferric Oxyhydroxide on Anaerobic Microbial Dechlorination of Polychlorinated Biphenyls in Hudson and Grasse River Sediment Microcosms: Dechlorination Extent, Preferences, Ortho Removal, and Its Enhancement

Microbial reductive dechlorination of polychlorinated biphenyls (PCBs) has been observed in many PCB-impacted sediments. However, this biodegradation is relatively site-specific and can be affected by PCB compositions and sediment geochemical conditions. To better understand the influence of a common competing electron acceptor, ferric oxyhydroxide (FeOOH), on dechlorination, two sediments (Hudson River and Grasse River sediments), and two PCB mixtures (PCB 5/12, 64/71, 105/114, and 149/153/170 in Mixture 1 and PCB 5/12, 64/71, 82/97/99, 144/170 in Mixture 2) were used for this microcosm study. The addition of 40 mmole/kg FeOOH completely inhibited PCB dechlorination in the Hudson sediment, but only moderately inhibited PCB dechlorination in the Grasse sediment with a 3-week longer lag time. The inhibitory effect in the Grasse sediment was mainly due to the loss of unflanked para dechlorination activity. Fe(II) analysis showed that dechlorination started prior to the consumption of Fe(III), which indicates PCB reduction and Fe(III) reduction were able to take place concurrently. Dehalococcoides 16S rRNA genes increased with the commencement of dechlorination in the Grasse sediment, but not in the completely inhibited Hudson sediment. Rare ortho dechlorination pathways were identified in FeOOH-amended Grasse sediment microcosms, dominated by transformations of PCB 25(24-3-CB) to PCB 13(3-4-CB) and PCB 28(24-4-CB) to PCB 15(4-4-CB). The addition of carbon sources (acetate or a fatty acid mixture with acetate, propionate, and butyrate) after 27 weeks of incubation reinitiated dechlorination in FeOOH-amended Hudson sediment microcosms. Also, the addition of carbon sources greatly enhanced ortho dechlorination in FeOOH-amended Grasse microcosms, indicating the utilization of acetate and/or the fatty acid mixture for ortho dechlorination-related microorganisms. A dechlorination pathway analysis approach revealed that para-flanked meta dechlorination was primarily preferred followed by ortho-/double-flanked meta dechlorination and single-/double-flanked para dechlorination in the Grasse sediment.

The antihistamine diphenhydramine is demethylated by anaerobic wastewater microorganisms

While emerging pharmaceutical contaminants are monitored in wastewater treatment and the environment, there is little information concerning their microbial metabolites. The transformation of diphenhydramine by microorganisms in anaerobic digester sludge was investigated using anaerobic cultures amended with 1 mM diphenhydramine as the sole carbon source. Complete transformation of the parent compound to a persistent metabolite occurred within 191 days. Using GC/MS analysis, the metabolite was identified as N-desmethyl diphenhydramine. Loss of the parent compound diphenhydramine followed a first order rate constant of 0.013 day^-1. There was no observed decrease in metabolite concentration even after a further 12 months of incubation, suggesting that the metabolite resists further degradation during wastewater treatment. Bacterial community diversity in the diphenhydramine transforming assay cultures showed enrichment in Comamonadaceae, Symbiobacteriaceae, Anaerolineaceae, and Prevotellaceae relative to unamended background controls. An anaerobic toxicity assay demonstrated that diphenhydramine has an inhibitory effect on both fermentative bacteria and methanogenic archaea in the wastewater community. In contrast, the metabolite N-desmethyl diphenhydramine partially suppressed methanogens but did not impact the fermenting community. To our knowledge, this is the first report of diphenhydramine metabolism by a bacterial community. The limited transformation of diphenhydramine by wastewater microorganisms indicates that N-desmethyl diphenhydramine will enter the environment along with unmetabolized diphenhydramine.

Towards developing a representative biochemical methane potential (BMP) assay for landfilled municipal solid waste - A review

The applicability of slurry-based (semi-liquids) BMP assay in determining biodegradation kinetic parameters of landfilled waste is critically reviewed. Factors affecting the amount and rate of methane (CH₄) production during anaerobic degradation of municipal solid waste (MSW) and optimal values of these factors specific to landfill conditions are presented. The history of conventional BMP, and some existing procedures are reviewed. A landfill BMP (LBMP) assay is proposed that manipulates some of the key factors, such as moisture content, particle and sample size, that affects the rate of CH₄ production and the CH₄ generation potential of landfilled MSW (LMSW). By selecting proper conditions for these factors, a representative BMP assay could be conducted to ensure accurate determinations of CH₄ potential and the kinetic parameters k; first order rate coefficient and L_o; methane generation potential.

Methods for determining the methane generation potential and methane generation rate constant for the FOD model: a review

In the first order decay (FOD) model of landfill methane generation, the methane generation potential ( L₀) and methane generation rate constant ( k) for both bulk municipal solid waste (MSW) and individual waste components have been determined by a variety of approaches throughout various literature. Differences in the determination methods for L₀ and k are related to differences in our understanding of the waste decomposition dynamics. A thorough understanding of the various available methods for determining L₀ and k values is critical for comparative study and the drawing of valid conclusions. The aim of this paper is to review the literature on the available determining methods and the ranges for L₀ and k values of both bulk MSW and individual waste components, while focusing on understanding the decomposition of waste, including the role of lignin. L₀ estimates in the literature are highly variable and have been derived from theoretical stoichiometric calculations, laboratory experiments, or actual field measurements. The lignin concentration in waste is correlated with the fraction of total degradable organic carbon (DOC_f) that will actually anaerobically degrade in the landfill. The k value has been determined by precipitation rates, laboratory simulations, aged-defined waste sample, and model fitting or regression analysis using actual gas data. However, the lignin concentration does not correlate well with the k value, presumably due to the impact of lignin arrangement and structure on cellulose bioavailability and degradation rate. In sum, this review summarizes the literature on the measurement of L₀ and k values, including the dynamics and decomposition of bulk MSW and individual waste components within landfills.

Rapid Enrichment of Dehalococcoides-Like Bacteria by Partial Hydrophobic Separation

Organohalide-respiring bacteria can be difficult to enrich and isolate, which can limit research on these important organisms. The goal of this research was to develop a method to rapidly (minutes to days) enrich these organisms from a mixed community. The method presented is based on the hypothesis that organohalide-respiring bacteria would be more hydrophobic than other bacteria as they dehalogenate hydrophobic compounds. The method developed tests this hypothesis by separating a portion of putative organohalide-respiring bacteria, those phylogenetically related to Dehalococcoides mccartyi, at the interface between a hydrophobic organic solvent and an aqueous medium. This novel partial separation technique was tested with a polychlorinated biphenyl-enriched sediment-free culture, a tetrachloroethene-enriched digester sludge culture, and uncontaminated lake sediment. Significantly higher fractions, up to 20.4 times higher, of putative organohalide-respiring bacteria were enriched at the interface between the medium and either hexadecane or trichloroethene. The selective partial separation of these putative organohalide-respiring bacteria occurred after 20 min, strongly suggesting that the separation was a result of physical-chemical interactions between the cell surface and hydrophobic solvent. Dechlorination activity postseparation was verified by the production of cis-dichloroethene when amended with tetrachloroethene. A longer incubation time of 6 days prior to separation with trichloroethene increased the total number of putative organohalide-respiring bacteria. This method provides a way to quickly separate some of the putative organohalide-respiring bacteria from other bacteria, thereby improving our ability to study multiple and different bacteria of potential interest and improving knowledge of these bacteria.IMPORTANCE Organohalide-respiring bacteria, bacteria capable of respiring chlorinated contaminants, can be difficult to enrich, which can limit their predictable use for the bioremediation of contaminated sites. This paper describes a method to quickly separate Dehalococcoides-like bacteria, a group of organisms containing organohalide-respiring bacteria, from other bacteria in a mixed community. From this work, Dehalococcoides-like bacteria appear to have a hydrophobic cell surface, facilitating a rapid (20 min) partial separation from a mixed culture at the surface of a hydrophobic liquid. This method was verified in a polychlorinated biphenyl-enriched sediment-free culture, an anaerobic digester sludge, and uncontaminated sediment. The method described can drastically reduce the amount of time required to partially separate Dehalococcoides-like bacteria from a complex mixed culture, improving researchers' ability to study these important bacteria.

Assessment of models for anaerobic biodegradation of a model bioplastic: Poly(hydroxybutyrate-co-hydroxyvalerate)

Kinetic models of anaerobic digestion (AD) are widely applied to soluble and particulate substrates, but have not been systematically evaluated for bioplastics. Here, five models are evaluated to determine their suitability for modeling of anaerobic biodegradation of the bioplastic poly(hydroxybutyrate-co-hydroxyvalerate) (PHBV): (1) first-order kinetics with and without a lag phase, (2) two-step first-order, (3) Monod (4) Contois, and (5) Gompertz. Three models that couple biomass growth with substrate hydrolysis (Monod, Contois, and Gompertz) gave the best overall fits for the data (R²>0.98), with reasonable estimates of ultimate CH₄ production. The particle size limits of these models were then evaluated. Below a particle size of 0.8mm, rates of hydrolysis and acetogenesis exceeded rates of methanogenesis with accumulation of intermediates leading to a temporary inhibition of CH₄ production. Based on model fit and simplicity, the Gompertz model is recommended for applications in which particle size is greater than 0.8mm.

Microbial-Catalyzed Reductive Dechlorination of Polychlorinated Biphenyls in Hudson and Grasse River Sediment Microcosms: Determination of Dechlorination Preferences and Identification of Rare Ortho Removal Pathways

Biodegradation of polychlorinated biphenyls (PCBs) is an important transformation and detoxification route in the environment. To better understand the influence of PCB congener compositions on dechlorination, sediments from two rivers, Hudson and Grasse, and two PCB mixtures (PCB 5/12, 64/71, 105/114, and 149/153/170 in Mixture 1 and PCB 5/12, 64/71, 82/97/99, and 144/170 in Mixture 2) were used for this microcosm study. The Grasse River sediment microcosms exhibited more extensive dechlorination than the Hudson River sediment microcosms. The extent of dechlorination was predominantly controlled by sediment itself, not by the PCB compositions. Rare ortho dechlorination, targeting mono-ortho PCB congeners was observed in Grasse sediment, indicating a potential for full dechlorination of some PCBs in this sediment. The identified ortho dechlorination pathways were PCB 28 (24-4-CB) to PCB 15 (4-4-CB) and PCB 25 (24-3-CB) to PCB 13(3-4-CB). The relative abundances of Dehalococcoides were much higher in both sediments spiked with PCBs. An apparent increase of Dehalococcoides 16S rRNA genes coincided with the commencement of dechlorination. The dechlorination preferences were identified using a modified data analysis approach focusing on chlorine neighboring conditions. In both sediments, the overall dechlorination preferred meta > para > ortho. Specially, ortho-/double-flanked meta-chlorines were primarily targeted followed by single-/double-flanked para-chlorines.

Detection of acidification limit in anaerobic membrane bioreactors at ambient temperature

High-volume, low-strength industrial wastewaters constitute a large potential for biogas production, which could be realized by membrane bioreactors operating at the ambient temperature of the wastewater. However, the start-up of low-temperature anaerobic processes using unadapted inoculum can be sensitive to overloading, which results in acidification. This study assessed if a novel acidification limit test can be used to identify stable organic loading rates as well as process over-loading. The test is based on easy-to-apply batch experiments for determination of the hydrolysis rate constant and the specific methanogenic activity of the acetotrophic and hydrogenotrophic pathways. For evaluation, two anaerobic membrane bioreactors, treating synthetic dairy wastewater at an ambient temperature of 24 °C, were used with a slow or a rapid start-up regime, respectively. Tests for hydrolysis rate and methanogenic activity were performed throughout the experiment and were used to calculate acidification limits for each system throughout the start-up. The acidification limit test was able to successfully identify both stable operation of one reactor and process failure of the other reactor as the organic loading rate increased. The reactor failure was caused by over-loading the acetotrophic pathway and coincided with microbial changes observed in real-time PCR and moving window analysis. Overall, the acidification limit tests seem promising as an easy applicable method for estimating what organic loading rate can be utilized, without risking acidification of anaerobic systems.

Relating Carbon and Nitrogen Isotope Effects to Reaction Mechanisms during Aerobic or Anaerobic Degradation of RDX (Hexahydro-1,3,5-Trinitro-1,3,5-Triazine) by Pure Bacterial Cultures

Kinetic isotopic fractionation of carbon and nitrogen during RDX (hexahydro-1,3,5-trinitro-1,3,5-triazine) biodegradation was investigated with pure bacterial cultures under aerobic and anaerobic conditions. Relatively large bulk enrichments in (15)N were observed during biodegradation of RDX via anaerobic ring cleavage (ε(15)N = -12.7‰ ± 0.8‰) and anaerobic nitro reduction (ε(15)N = -9.9‰ ± 0.7‰), in comparison to smaller effects during biodegradation via aerobic denitration (ε(15)N = -2.4‰ ± 0.2‰). (13)C enrichment was negligible during aerobic RDX biodegradation (ε(13)C = -0.8‰ ± 0.5‰) but larger during anaerobic degradation (ε(13)C = -4.0‰ ± 0.8‰), with modest variability among genera. Dual-isotope ε(13)C/ε(15)N analyses indicated that the three biodegradation pathways could be distinguished isotopically from each other and from abiotic degradation mechanisms. Compared to the initial RDX bulk δ(15)N value of +9‰, δ(15)N values of the NO2 (-) released from RDX ranged from -7‰ to +2‰ during aerobic biodegradation and from -42‰ to -24‰ during anaerobic biodegradation. Numerical reaction models indicated that N isotope effects of NO2 (-) production were much larger than, but systematically related to, the bulk RDX N isotope effects with different bacteria. Apparent intrinsic ε(15)N-NO2 (-) values were consistent with an initial denitration pathway in the aerobic experiments and more complex processes of NO2 (-) formation associated with anaerobic ring cleavage. These results indicate the potential for isotopic analysis of residual RDX for the differentiation of degradation pathways and indicate that further efforts to examine the isotopic composition of potential RDX degradation products (e.g., NOx) in the environment are warranted.

IMPORTANCE

This work provides the first systematic evaluation of the isotopic fractionation of carbon and nitrogen in the organic explosive RDX during degradation by different pathways. It also provides data on the isotopic effects observed in the nitrite produced during RDX biodegradation. Both of these results could lead to better understanding of the fate of RDX in the environment and help improve monitoring and remediation technologies.

A batch assay to measure microbial hydrogen sulfide production from sulfur-containing solid wastes

Large volumes of sulfur-containing wastes enter municipal solid waste landfills each year. Under the anaerobic conditions that prevail in landfills, oxidized forms of sulfur, primarily sulfate, are converted to sulfide. Hydrogen sulfide (H2S) is corrosive to landfill gas collection and treatment systems, and its presence in landfill gas often necessitates the installation of expensive removal systems. For landfill operators to understand the cost of managing sulfur-containing wastes, an estimate of the H2S production potential is needed. The objective of this study was to develop and demonstrate a biochemical sulfide potential (BSP) test to measure the amount of H2S produced by different types of sulfur-containing wastes in a relatively fast (30days) and inexpensive (125mL serum bottles) batch assay. This study confirmed the toxic effect of H2S on both sulfate reduction and methane production in batch systems, and demonstrated that removing accumulated H2S by base adsorption was effective for mitigating inhibition. H2S production potentials of coal combustion fly ash, flue gas desulfurization residual, municipal solid waste combustion ash, and construction and demolition waste were determined in BSP assays. After 30days of incubation, most of the sulfate in the wastes was converted to gaseous or aqueous phase sulfide, with BSPs ranging from 0.8 to 58.8mLH2S/g waste, depending on the chemical composition of the samples. Selected samples contained solid phase sulfide which contributed to the measured H2S yield. A 60day incubation in selected samples resulted in 39-86% additional sulfide production. H2S production measured in BSP assays was compared with that measured in simulated landfill reactors and that calculated from chemical analyses. H2S production in BSP assays and in reactors was lower than the stoichiometric values calculated from chemical composition for all wastes tested, demonstrating the importance of assays to estimate the microbial sulfide production potential of sulfur-containing wastes.

Bioaugmentation Mitigates the Impact of Estrogen on Coliform-Grazing Protozoa in Slow Sand Filters

Exposure to endocrine-disrupting chemicals (EDCs), such as estrogens, is a growing issue for human and animal health as they have been shown to cause reproductive and developmental abnormalities in wildlife and plants and have been linked to male infertility disorders in humans. Intensive farming and weather events, such as storms, flash flooding, and landslides, contribute estrogen to waterways used to supply drinking water. This paper explores the impact of estrogen exposure on the performance of slow sand filters (SSFs) used for water treatment. The feasibility and efficacy of SSF bioaugmentation with estrogen-degrading bacteria was also investigated, to determine whether removal of natural estrogens (estrone, estradiol, and estriol) and overall SSF performance for drinking water treatment could be improved. Strains for SSF augmentation were isolated from full-scale, municipal SSFs so as to optimize survival in the laboratory-scale SSFs used. Concentrations of the natural estrogens, determined by gas chromatography coupled with mass spectrometry (GC-MS), revealed augmented SSFs reduced the overall estrogenic potency of the supplied water by 25% on average and removed significantly more estrone and estradiol than nonaugmented filters. A negative correlation was found between coliform removal and estrogen concentration in nonaugmented filters. This was due to the toxic inhibition of protozoa, indicating that high estrogen concentrations can have functional implications for SSFs (such as impairing coliform removal). Consequently, we suggest that high estrogen concentrations could impact significantly on water quality production and, in particular, on pathogen removal in biological water filters.

The Effect of Perfluorooctane Sulfonate, Exposure Time, and Chemical Mixtures on Methanogenic Community Structure and Function

A plethora of organic micropollutant mixtures are found in untreated municipal wastewater. Anaerobic digesters receive large loadings of hydrophobic micropollutants that sorb to wastewater biosolids. Despite micropollutants being pervasive as mixtures, little research is available to explain the impact that mixtures of compounds, as well as exposure time, have on microbial communities in anaerobic digesters. Perfluorooctane sulfonate (PFOS) was added to anaerobic enrichment cultures in both short-term (14 days) and long-term (140 days) studies to determine the impact of exposure time. Additionally, triclosan was added during the experiments to investigate the impact of mixtures on community structure and function. PFOS did not alter methane production in short-term studies, but in long-term studies, methane production increased, consistent with our hypothesis that PFOS may act as a metabolic uncoupler. The impact of triclosan on methane production was exacerbated when PFOS was already present in the anaerobic enrichment cultures. Triclosan also had greater impacts on microbial community structures in the bottles that had been exposed to PFOS long-term. These results demonstrate that both chemical mixtures and exposure time are important parameters to address when trying to define the impacts of micropollutants on anaerobic microbial communities.

Acceleration of aged-landfill stabilization by combining partial nitrification and leachate recirculation: a field-scale study

Leachate recirculation for rapid landfill stabilization can result in the accumulation of high-strength ammonium. An on-site sequencing batch reactor (SBR) was therefore, applied to oxidize the ammonium to nitrite, which was then recirculated to the landfill for denitrification to nitrogen gas. At relatively higher ammonium levels, nitrite accumulated well in the SBR; the nitrite was denitrified stably in the landfill, despite an insufficient biodegradable carbon source in the leachate. As the leachate was recirculated, the methane and carbon dioxide contents produced from the landfill fluctuated, implying that the organic acids and hydrogen produced in the acid production phase acted as the carbon source for denitrification in the landfill. Leachate recirculation combined with ex-situ partial nitrification of the leachate may enhance the biodegradation process by: (a) removing the nitrogen that is contained with the leachate, and (b) accelerating landfill stabilization, because the biodegradation efficiency of landfill waste is increased by supplying sufficient moisture and its byproducts are used as the carbon source for denitrification. In addition, partial nitrification using an SBR has advantages for complete denitrification in the landfill, since the available carbon source is in short supply in aged landfills.

Biohydrogen production from industrial wastewaters

The feasibility of producing hydrogen from various industrial wastes, such as vinasses (sugar and tequila industries), and raw and physicochemical-treated wastewater from the plastic industry and toilet aircraft wastewater, was evaluated. The results showed that the tequila vinasses presented the maximum hydrogen generation potential, followed by the raw plastic industry wastewater, aircraft wastewater, and physicochemical-treated wastewater from the plastic industry and sugar vinasses, respectively. The hydrogen production from the aircraft wastewater was increased by the adaptation of the microorganisms in the anaerobic sequencing batch reactor.