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For: Hong SY, Seo PJ, Yang MS, Xiang F, Park CM. Exploring valid reference genes for gene expression studies in Brachypodium distachyon by real-time PCR. BMC Plant Biol 2008;8:112. [PMID: 18992143 PMCID: PMC2588586 DOI: 10.1186/1471-2229-8-112] [Citation(s) in RCA: 283] [Impact Index Per Article: 17.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/29/2008] [Accepted: 11/07/2008] [Indexed: 05/18/2023]
Number Cited by Other Article(s)
1
Soorni A, Rezvani M, Bigdeli H. Transcriptome-guided selection of stable reference genes for expression analysis in spinach. Sci Rep 2024;14:22113. [PMID: 39333266 PMCID: PMC11436919 DOI: 10.1038/s41598-024-73444-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/07/2024] [Accepted: 09/17/2024] [Indexed: 09/29/2024]  Open
2
Machado R, Muchut SE, Dezar C, Reutemann AG, Alesso CA, Günthardt MM, Vegetti AC, Vogel J, Uberti Manassero NG. BdRCN4, a Brachypodium distachyon TFL1 homologue, is involved in regulation of apical meristem fate. PLANT MOLECULAR BIOLOGY 2024;114:81. [PMID: 38940986 DOI: 10.1007/s11103-024-01467-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/04/2023] [Accepted: 05/13/2024] [Indexed: 06/29/2024]
3
Zhang P, Chen S, Chen S, Zhu Y, Lin Y, Xu X, Liu Z, Zou S. Selection and Validation of qRT-PCR Internal Reference Genes to Study Flower Color Formation in Camellia impressinervis. Int J Mol Sci 2024;25:3029. [PMID: 38474274 DOI: 10.3390/ijms25053029] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/16/2024] [Revised: 02/26/2024] [Accepted: 02/27/2024] [Indexed: 03/14/2024]  Open
4
Thieme M, Minadakis N, Himber C, Keller B, Xu W, Rutowicz K, Matteoli C, Böhrer M, Rymen B, Laudencia-Chingcuanco D, Vogel JP, Sibout R, Stritt C, Blevins T, Roulin AC. Transposition of HOPPLA in siRNA-deficient plants suggests a limited effect of the environment on retrotransposon mobility in Brachypodium distachyon. PLoS Genet 2024;20:e1011200. [PMID: 38470914 PMCID: PMC10959353 DOI: 10.1371/journal.pgen.1011200] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/30/2023] [Revised: 03/22/2024] [Accepted: 02/23/2024] [Indexed: 03/14/2024]  Open
5
Jin G, Zhang X, Yu S, Du Y, Wang M, Zhao C, Zhang M. Screening and validation of optimal miRNA reference genes in different developing stages and tissues of Lilium henryi Baker. Sci Rep 2024;14:1545. [PMID: 38233457 PMCID: PMC10794412 DOI: 10.1038/s41598-024-51562-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/24/2023] [Accepted: 01/06/2024] [Indexed: 01/19/2024]  Open
6
El-Azaz J, Moore B, Takeda-Kimura Y, Yokoyama R, Wijesingha Ahchige M, Chen X, Schneider M, Maeda HA. Coordinated regulation of the entry and exit steps of aromatic amino acid biosynthesis supports the dual lignin pathway in grasses. Nat Commun 2023;14:7242. [PMID: 37945591 PMCID: PMC10636026 DOI: 10.1038/s41467-023-42587-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2023] [Accepted: 10/16/2023] [Indexed: 11/12/2023]  Open
7
Chen Y, He Q, Li X, Zhang Y, Li J, Zhang L, Yao X, Zhang X, Liu C, Wang H. Identification of Accurate Reference Genes for qRT-PCR Analysis of Gene Expression in Eremochloa ophiuroides under Multiple Stresses of Phosphorus Deficiency and/or Aluminum Toxicity. PLANTS (BASEL, SWITZERLAND) 2023;12:3751. [PMID: 37960107 PMCID: PMC10649868 DOI: 10.3390/plants12213751] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/10/2023] [Revised: 10/26/2023] [Accepted: 10/31/2023] [Indexed: 11/15/2023]
8
Ying S, Scheible WR. REGULATOR OF FLOWERING AND STRESS manipulates stomatal density and size in Brachypodium. PHYSIOLOGIA PLANTARUM 2023;175:e14008. [PMID: 37882269 DOI: 10.1111/ppl.14008] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/26/2023] [Accepted: 08/04/2023] [Indexed: 10/27/2023]
9
Sasi S, Krishnan S, Kodackattumannil P, Shamisi AA, Aldarmaki M, Lekshmi G, Kottackal M, Amiri KMA. DNA-free high-quality RNA extraction from 39 difficult-to-extract plant species (representing seasonal tissues and tissue types) of 32 families, and its validation for downstream molecular applications. PLANT METHODS 2023;19:84. [PMID: 37568159 PMCID: PMC10416385 DOI: 10.1186/s13007-023-01063-5] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/19/2023] [Accepted: 07/24/2023] [Indexed: 08/13/2023]
10
Imperadore P, Cagnin S, Allegretti V, Millino C, Raffini F, Fiorito G, Ponte G. Transcriptome-wide selection and validation of a solid set of reference genes for gene expression studies in the cephalopod mollusk Octopus vulgaris. Front Mol Neurosci 2023;16:1091305. [PMID: 37266373 PMCID: PMC10230085 DOI: 10.3389/fnmol.2023.1091305] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/06/2022] [Accepted: 02/20/2023] [Indexed: 06/03/2023]  Open
11
Selection of reference genes for RT-qPCR analysis of rice with Rhizoctonia solani infection and biocontrol PGPR/KSi application. Mol Biol Rep 2023;50:4225-4237. [PMID: 36894770 DOI: 10.1007/s11033-023-08361-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/09/2022] [Accepted: 02/23/2023] [Indexed: 03/11/2023]
12
Sharma M, Jabaji S. Transcriptional landscape of Brachypodium distachyon roots during interaction with Bacillus velezensis strain B26. Genomics 2023;115:110583. [PMID: 36804269 DOI: 10.1016/j.ygeno.2023.110583] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/19/2022] [Revised: 02/02/2023] [Accepted: 02/11/2023] [Indexed: 02/17/2023]
13
Su SH, Levine HG, Masson PH. Brachypodium distachyon Seedlings Display Accession-Specific Morphological and Transcriptomic Responses to the Microgravity Environment of the International Space Station. Life (Basel) 2023;13:life13030626. [PMID: 36983782 PMCID: PMC10058394 DOI: 10.3390/life13030626] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/28/2022] [Revised: 02/06/2023] [Accepted: 02/16/2023] [Indexed: 03/06/2023]  Open
14
Wang Q, Guo C, Yang S, Zhong Q, Tian J. Screening and Verification of Reference Genes for Analysis of Gene Expression in Garlic (Allium sativum L.) under Cold and Drought Stress. PLANTS (BASEL, SWITZERLAND) 2023;12:763. [PMID: 36840111 PMCID: PMC9963267 DOI: 10.3390/plants12040763] [Citation(s) in RCA: 7] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/22/2022] [Revised: 01/30/2023] [Accepted: 02/01/2023] [Indexed: 06/18/2023]
15
Lin Y, Liu G, Rao Y, Wang B, Tian R, Tan Y, Peng T. Identification and validation of reference genes for qRT-PCR analyses under different experimental conditions in Allium wallichii. JOURNAL OF PLANT PHYSIOLOGY 2023;281:153925. [PMID: 36657231 DOI: 10.1016/j.jplph.2023.153925] [Citation(s) in RCA: 7] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/04/2023] [Accepted: 01/11/2023] [Indexed: 06/17/2023]
16
Gombos M, Hapek N, Kozma-Bognár L, Grezal G, Zombori Z, Kiss E, Györgyey J. Limited water stress modulates expression of circadian clock genes in Brachypodium distachyon roots. Sci Rep 2023;13:1241. [PMID: 36690685 PMCID: PMC9870971 DOI: 10.1038/s41598-022-27287-4] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/13/2022] [Accepted: 12/29/2022] [Indexed: 01/24/2023]  Open
17
Ying S, Scheible WR, Lundquist PK. A stress-inducible protein regulates drought tolerance and flowering time in Brachypodium and Arabidopsis. PLANT PHYSIOLOGY 2023;191:643-659. [PMID: 36264121 PMCID: PMC9806587 DOI: 10.1093/plphys/kiac486] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/24/2022] [Accepted: 09/25/2022] [Indexed: 06/16/2023]
18
Guo J, Liu H, Dai K, Yuan X, Guo P, Shi W, Zhou M. Identification of Brachypodium distachyon B3 genes reveals that BdB3-54 regulates primary root growth. FRONTIERS IN PLANT SCIENCE 2022;13:1050171. [PMID: 36438129 PMCID: PMC9686306 DOI: 10.3389/fpls.2022.1050171] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/21/2022] [Accepted: 10/27/2022] [Indexed: 06/16/2023]
19
Selection of species specific panel of reference genes in peripheral blood mononuclear cells of native livestock species adapted to trans-Himalayan region of Leh-Ladakh. Sci Rep 2022;12:18473. [PMID: 36323741 PMCID: PMC9630269 DOI: 10.1038/s41598-022-22588-0] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/23/2021] [Accepted: 10/17/2022] [Indexed: 01/06/2023]  Open
20
Chen S, Hou J, Fu Y, Li H. Genome-wide identification of YABBY transcription factors in Brachypodium distachyon and functional characterization of Bd DROOPING LEAF. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2022;185:13-24. [PMID: 35640497 DOI: 10.1016/j.plaphy.2022.05.030] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/10/2022] [Revised: 05/17/2022] [Accepted: 05/22/2022] [Indexed: 06/15/2023]
21
Li G, Ma J, Yin J, Guo F, Xi K, Yang P, Cai X, Jia Q, Li L, Liu Y, Zhu Y. Identification of Reference Genes for Reverse Transcription-Quantitative PCR Analysis of Ginger Under Abiotic Stress and for Postharvest Biology Studies. FRONTIERS IN PLANT SCIENCE 2022;13:893495. [PMID: 35734245 PMCID: PMC9207462 DOI: 10.3389/fpls.2022.893495] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/10/2022] [Accepted: 04/27/2022] [Indexed: 06/15/2023]
22
Identification and testing of reference genes for qRT-PCR analysis during pear fruit development. Biologia (Bratisl) 2022. [DOI: 10.1007/s11756-022-01087-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/02/2022]
23
Compatible interaction of Brachypodium distachyon and endophytic fungus Microdochium bolleyi. PLoS One 2022;17:e0265357. [PMID: 35286339 PMCID: PMC8920291 DOI: 10.1371/journal.pone.0265357] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/24/2021] [Accepted: 03/01/2022] [Indexed: 11/19/2022]  Open
24
Fan M, Jensen JK, Zemelis-Durfee S, Kim SJ, Chan JY, Beaudry CM, Brandizzi F, Wilkerson CG. Disruption of Brachypodium lichenase alters metabolism of mixed-linkage glucan and starch. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2022;109:927-939. [PMID: 34845787 DOI: 10.1111/tpj.15603] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/07/2021] [Revised: 11/11/2021] [Accepted: 11/15/2021] [Indexed: 05/21/2023]
25
Liu YP, Zhang Y, Liu F, Liu T, Chen JY, Fu G, Zheng CY, Su DD, Wang YN, Zhou HK, Su X, Aj H, Wang XM. Establishment of reference (housekeeping) genes via quantitative real-time PCR for investigation of the genomic basis of abiotic stress resistance in Psammochloa villosa (Poaceae). JOURNAL OF PLANT PHYSIOLOGY 2022;268:153575. [PMID: 34837885 DOI: 10.1016/j.jplph.2021.153575] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/01/2021] [Revised: 11/18/2021] [Accepted: 11/18/2021] [Indexed: 06/13/2023]
26
Liao Z, Sun Z, Bi Q, Gong Q, Sun B, Wei Y, Liang M, Xu H. Screening of reference genes in tiger puffer (Takifugu rubripes) across tissues and under different nutritional conditions. FISH PHYSIOLOGY AND BIOCHEMISTRY 2021;47:1739-1758. [PMID: 34482494 DOI: 10.1007/s10695-021-01012-w] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/01/2021] [Accepted: 08/29/2021] [Indexed: 06/13/2023]
27
Selection of the reference genes for quantitative gene expression by RT-qPCR in the desert plant Stipagrostis pennata. Sci Rep 2021;11:21711. [PMID: 34741052 PMCID: PMC8571334 DOI: 10.1038/s41598-021-00833-2] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/15/2021] [Accepted: 10/18/2021] [Indexed: 11/18/2022]  Open
28
Amini S, Arsova B, Gobert S, Carnol M, Bosman B, Motte P, Watt M, Hanikenne M. Transcriptional regulation of ZIP genes is independent of local zinc status in Brachypodium shoots upon zinc deficiency and resupply. PLANT, CELL & ENVIRONMENT 2021;44:3376-3397. [PMID: 34263935 DOI: 10.1111/pce.14151] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/28/2020] [Revised: 07/05/2021] [Accepted: 07/10/2021] [Indexed: 06/13/2023]
29
Yang X, Hill KA, Austin RS, Tian L. Differential Gene Expression of Brachypodium distachyon Roots Colonized by Gluconacetobacter diazotrophicus and the Role of BdCESA8 in the Colonization. MOLECULAR PLANT-MICROBE INTERACTIONS : MPMI 2021;34:1143-1156. [PMID: 34709058 DOI: 10.1094/mpmi-06-20-0170-r] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
30
Smith RA, Cass CL, Petrik DL, Padmakshan D, Ralph J, Sedbrook JC, Karlen SD. Stacking AsFMT overexpression with BdPMT loss of function enhances monolignol ferulate production in Brachypodium distachyon. PLANT BIOTECHNOLOGY JOURNAL 2021;19:1878-1886. [PMID: 33949064 PMCID: PMC8428837 DOI: 10.1111/pbi.13606] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/18/2020] [Revised: 04/09/2021] [Accepted: 04/13/2021] [Indexed: 06/12/2023]
31
Selection and validation of reference genes for RT-qPCR analysis in Desmodium styracifolium Merr. 3 Biotech 2021;11:403. [PMID: 34458065 DOI: 10.1007/s13205-021-02954-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/18/2021] [Accepted: 07/29/2021] [Indexed: 10/20/2022]  Open
32
Jangra R, Brunetti SC, Wang X, Kaushik P, Gulick PJ, Foroud NA, Wang S, Lee JS. Duplicated antagonistic EPF peptides optimize grass stomatal initiation. Development 2021;148:271118. [PMID: 34328169 DOI: 10.1242/dev.199780] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/07/2021] [Accepted: 07/19/2021] [Indexed: 11/20/2022]
33
Sharma S, Vengavasi K, Kumar MN, Yadav SK, Pandey R. Expression of potential reference genes in response to macronutrient stress in rice and soybean. Gene 2021;792:145742. [PMID: 34051336 DOI: 10.1016/j.gene.2021.145742] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/27/2020] [Revised: 05/13/2021] [Accepted: 05/24/2021] [Indexed: 02/04/2023]
34
Identification of the most suitable reference gene for gene expression studies with development and abiotic stress response in Bromus sterilis. Sci Rep 2021;11:13393. [PMID: 34183710 PMCID: PMC8238991 DOI: 10.1038/s41598-021-92780-1] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/27/2021] [Accepted: 06/11/2021] [Indexed: 01/15/2023]  Open
35
Callegari Ferrari R, Pires Bittencourt P, Yumi Nagumo P, Silva Oliveira W, Aurineide Rodrigues M, Hartwell J, Freschi L. Developing Portulaca oleracea as a model system for functional genomics analysis of C4/CAM photosynthesis. FUNCTIONAL PLANT BIOLOGY : FPB 2021;48:666-682. [PMID: 33256895 DOI: 10.1071/fp20202] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/12/2020] [Accepted: 10/20/2020] [Indexed: 06/12/2023]
36
Li M, Li X, Wang C, Li Q, Zhu S, Zhang Y, Li X, Yang F, Zhu X. Selection and Validation of Reference Genes For qRT-PCR Analysis of Rhopalosiphum padi (Hemiptera: Aphididae). Front Physiol 2021;12:663338. [PMID: 33935809 PMCID: PMC8079785 DOI: 10.3389/fphys.2021.663338] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/02/2021] [Accepted: 03/22/2021] [Indexed: 11/23/2022]  Open
37
Linardić M, Braybrook SA. Identification and selection of optimal reference genes for qPCR-based gene expression analysis in Fucus distichus under various abiotic stresses. PLoS One 2021;16:e0233249. [PMID: 33909633 PMCID: PMC8081170 DOI: 10.1371/journal.pone.0233249] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2020] [Accepted: 02/18/2021] [Indexed: 11/19/2022]  Open
38
Changenet V, Macadré C, Boutet-Mercey S, Magne K, Januario M, Dalmais M, Bendahmane A, Mouille G, Dufresne M. Overexpression of a Cytochrome P450 Monooxygenase Involved in Orobanchol Biosynthesis Increases Susceptibility to Fusarium Head Blight. FRONTIERS IN PLANT SCIENCE 2021;12:662025. [PMID: 33868356 PMCID: PMC8048717 DOI: 10.3389/fpls.2021.662025] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/31/2021] [Accepted: 03/11/2021] [Indexed: 05/28/2023]
39
Bai X, Chen T, Wu Y, Tang M, Xu ZF. Selection and Validation of Reference Genes for qRT-PCR Analysis in the Oil-Rich Tuber Crop Tiger Nut (Cyperus esculentus) Based on Transcriptome Data. Int J Mol Sci 2021;22:ijms22052569. [PMID: 33806437 PMCID: PMC7961719 DOI: 10.3390/ijms22052569] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2021] [Revised: 02/24/2021] [Accepted: 02/25/2021] [Indexed: 11/16/2022]  Open
40
Li Y, Liang X, Zhou X, An Y, Li M, Yuan L, Li Y, Wang Y. Spatio-temporal selection of reference genes in the two congeneric species of Glycyrrhiza. Sci Rep 2021;11:1122. [PMID: 33654132 PMCID: PMC7925658 DOI: 10.1038/s41598-020-79298-8] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/21/2020] [Accepted: 12/03/2020] [Indexed: 11/25/2022]  Open
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Brachypodium Phenylalanine Ammonia Lyase (PAL) Promotes Antiviral Defenses against Panicum mosaic virus and Its Satellites. mBio 2021;12:mBio.03518-20. [PMID: 33593968 PMCID: PMC8545123 DOI: 10.1128/mbio.03518-20] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
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Mayer BF, Charron J. Transcriptional memories mediate the plasticity of cold stress responses to enable morphological acclimation in Brachypodium distachyon. THE NEW PHYTOLOGIST 2021;229:1615-1634. [PMID: 32966623 PMCID: PMC7820978 DOI: 10.1111/nph.16945] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/07/2020] [Accepted: 09/04/2020] [Indexed: 05/03/2023]
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Reilly A, Karki SJ, Twamley A, Tiley AMM, Kildea S, Feechan A. Isolate-Specific Responses of the Nonhost Grass Brachypodium distachyon to the Fungal Pathogen Zymoseptoria tritici Compared with Wheat. PHYTOPATHOLOGY 2021;111:356-368. [PMID: 32720875 DOI: 10.1094/phyto-02-20-0041-r] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
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Hou S, Zhao T, Yang D, Li Q, Liang L, Wang G, Ma Q. Selection and Validation of Reference Genes for Quantitative RT-PCR Analysis in Corylus heterophylla Fisch. × Corylus avellana L. PLANTS 2021;10:plants10010159. [PMID: 33467497 PMCID: PMC7830083 DOI: 10.3390/plants10010159] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/08/2020] [Revised: 01/07/2021] [Accepted: 01/08/2021] [Indexed: 11/16/2022]
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Peng W, Song N, Li W, Yan M, Huang C, Yang Y, Duan K, Dai L, Wang B. Integrated Analysis of MicroRNA and Target Genes in Brachypodium distachyon Infected by Magnaporthe oryzae by Small RNA and Degradome Sequencing. FRONTIERS IN PLANT SCIENCE 2021;12:742347. [PMID: 34659311 PMCID: PMC8517397 DOI: 10.3389/fpls.2021.742347] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/16/2021] [Accepted: 09/09/2021] [Indexed: 05/06/2023]
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Guo J, Bai X, Dai K, Yuan X, Guo P, Zhou M, Shi W, Hao C. Identification of GATA Transcription Factors in Brachypodium distachyon and Functional Characterization of BdGATA13 in Drought Tolerance and Response to Gibberellins. FRONTIERS IN PLANT SCIENCE 2021;12:763665. [PMID: 34745195 PMCID: PMC8567175 DOI: 10.3389/fpls.2021.763665] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/24/2021] [Accepted: 09/30/2021] [Indexed: 05/13/2023]
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Guo X, Wang Q, Liu Y, Zhang X, Zhang L, Fan S. Screening of Salt Stress Responsive Genes in Brachypodium distachyon (L.) Beauv. by Transcriptome Analysis. PLANTS (BASEL, SWITZERLAND) 2020;9:E1522. [PMID: 33182395 PMCID: PMC7697870 DOI: 10.3390/plants9111522] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/02/2020] [Revised: 10/31/2020] [Accepted: 11/06/2020] [Indexed: 12/11/2022]
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Li Y, Liang X, Zhou X, Wu Z, Yuan L, Wang Y, Li Y. Selection of Reference Genes for qRT-PCR Analysis in Medicinal Plant Glycyrrhiza under Abiotic Stresses and Hormonal Treatments. PLANTS (BASEL, SWITZERLAND) 2020;9:E1441. [PMID: 33114570 PMCID: PMC7692165 DOI: 10.3390/plants9111441] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/20/2020] [Revised: 10/18/2020] [Accepted: 10/22/2020] [Indexed: 11/16/2022]
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Sharma M, Saleh D, Charron JB, Jabaji S. A Crosstalk Between Brachypodium Root Exudates, Organic Acids, and Bacillus velezensis B26, a Growth Promoting Bacterium. Front Microbiol 2020;11:575578. [PMID: 33123106 PMCID: PMC7573104 DOI: 10.3389/fmicb.2020.575578] [Citation(s) in RCA: 18] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/23/2020] [Accepted: 09/10/2020] [Indexed: 12/23/2022]  Open
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Krzeszowiec W, Novokreshchenova M, Gabryś H. Chloroplasts in C3 grasses move in response to blue-light. PLANT CELL REPORTS 2020;39:1331-1343. [PMID: 32661816 PMCID: PMC7497455 DOI: 10.1007/s00299-020-02567-3] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/08/2020] [Accepted: 07/08/2020] [Indexed: 05/13/2023]
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