1
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Windhagauer M, Doblin MA, Signal B, Kuzhiumparambil U, Fabris M, Abbriano RM. Metabolic response to a heterologous poly-3-hydroxybutyrate (PHB) pathway in Phaeodactylum tricornutum. Appl Microbiol Biotechnol 2024; 108:104. [PMID: 38212969 DOI: 10.1007/s00253-023-12823-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2023] [Revised: 10/25/2023] [Accepted: 10/30/2023] [Indexed: 01/13/2024]
Abstract
The marine diatom Phaeodactylum tricornutum is an emerging host for metabolic engineering, but little is known about how introduced pathways are integrated into the existing metabolic framework of the host or influence transgene expression. In this study, we expressed the heterologous poly-3-hydroxybutyrate (PHB) pathway using episomal expression, which draws on the precursor acetyl coenzyme-A (AcCoA). By experimentally perturbing cultivation conditions, we gained insight into the regulation of the endogenous metabolism in transgenic lines under various environmental scenarios, as well as on alterations in AcCoA flux within the host cell. Biosynthesis of PHB led to distinct shifts in the metabolome of the host, and further analysis revealed a condition-dependent relationship between endogenous and transgenic metabolic pathways. Under N limitation, which induced a significant increase in neutral lipid content, both metabolic and transcriptomic data suggest that AcCoA was preferably shunted into the endogenous pathway for lipid biosynthesis over the transgenic PHB pathway. In contrast, supply of organic carbon in the form of glycerol supported both fatty acid and PHB biosynthesis, suggesting cross-talk between cytosolic and plastidial AcCoA precursors. This is the first study to investigate the transcriptomic and metabolomic response of diatom cell lines expressing a heterologous multi-gene pathway under different environmental conditions, providing useful insights for future engineering attempts for pathways based on the precursor AcCoA. KEY POINTS: • PHB expression had minimal effects on transcription of adjacent pathways. • N limitation favoured native lipid rather than transgenic PHB synthesis. • Glycerol addition allowed simultaneous lipid and PHB accumulation.
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Affiliation(s)
- Matthias Windhagauer
- Climate Change Cluster, University of Technology Sydney, 15 Broadway, Ultimo, NSW, 2007, Australia.
| | - Martina A Doblin
- Climate Change Cluster, University of Technology Sydney, 15 Broadway, Ultimo, NSW, 2007, Australia
| | - Brandon Signal
- School of Medicine, College of Health and Medicine, University of Tasmania, Hobart, TAS, Australia
| | | | - Michele Fabris
- SDU Biotechnology, Faculty of Engineering, University of Southern Denmark, 5230, Odense M, Denmark
| | - Raffaela M Abbriano
- Climate Change Cluster, University of Technology Sydney, 15 Broadway, Ultimo, NSW, 2007, Australia
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2
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Espinoza JL, Phillips A, Prentice MB, Tan GS, Kamath PL, Lloyd KG, Dupont CL. Unveiling the microbial realm with VEBA 2.0: a modular bioinformatics suite for end-to-end genome-resolved prokaryotic, (micro)eukaryotic and viral multi-omics from either short- or long-read sequencing. Nucleic Acids Res 2024; 52:e63. [PMID: 38909293 DOI: 10.1093/nar/gkae528] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/08/2024] [Revised: 05/21/2024] [Accepted: 06/10/2024] [Indexed: 06/24/2024] Open
Abstract
The microbiome is a complex community of microorganisms, encompassing prokaryotic (bacterial and archaeal), eukaryotic, and viral entities. This microbial ensemble plays a pivotal role in influencing the health and productivity of diverse ecosystems while shaping the web of life. However, many software suites developed to study microbiomes analyze only the prokaryotic community and provide limited to no support for viruses and microeukaryotes. Previously, we introduced the Viral Eukaryotic Bacterial Archaeal (VEBA) open-source software suite to address this critical gap in microbiome research by extending genome-resolved analysis beyond prokaryotes to encompass the understudied realms of eukaryotes and viruses. Here we present VEBA 2.0 with key updates including a comprehensive clustered microeukaryotic protein database, rapid genome/protein-level clustering, bioprospecting, non-coding/organelle gene modeling, genome-resolved taxonomic/pathway profiling, long-read support, and containerization. We demonstrate VEBA's versatile application through the analysis of diverse case studies including marine water, Siberian permafrost, and white-tailed deer lung tissues with the latter showcasing how to identify integrated viruses. VEBA represents a crucial advancement in microbiome research, offering a powerful and accessible software suite that bridges the gap between genomics and biotechnological solutions.
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Affiliation(s)
- Josh L Espinoza
- Department of Environment and Sustainability, J. Craig Venter Institute, La Jolla, CA 92037, USA
- Department of Genomic Medicine and Infectious Diseases, J. Craig Venter Institute, La Jolla, CA 92037, USA
| | - Allan Phillips
- Department of Environment and Sustainability, J. Craig Venter Institute, La Jolla, CA 92037, USA
- Department of Genomic Medicine and Infectious Diseases, J. Craig Venter Institute, La Jolla, CA 92037, USA
| | - Melanie B Prentice
- School of Food and Agriculture, University of Maine, Orono, ME 04469, USA
| | - Gene S Tan
- Department of Genomic Medicine and Infectious Diseases, J. Craig Venter Institute, La Jolla, CA 92037, USA
| | - Pauline L Kamath
- School of Food and Agriculture, University of Maine, Orono, ME 04469, USA
- Maine Center for Genetics in the Environment, University of Maine, Orono, ME 04469, USA
| | - Karen G Lloyd
- Microbiology Department, University of Tennessee, Knoxville, TN 37917, USA
| | - Chris L Dupont
- Department of Environment and Sustainability, J. Craig Venter Institute, La Jolla, CA 92037, USA
- Department of Genomic Medicine and Infectious Diseases, J. Craig Venter Institute, La Jolla, CA 92037, USA
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3
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Adetunji AI, Erasmus M. Green Synthesis of Bioplastics from Microalgae: A State-of-the-Art Review. Polymers (Basel) 2024; 16:1322. [PMID: 38794516 PMCID: PMC11124873 DOI: 10.3390/polym16101322] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/09/2024] [Revised: 04/30/2024] [Accepted: 05/04/2024] [Indexed: 05/26/2024] Open
Abstract
The synthesis of conventional plastics has increased tremendously in the last decades due to rapid industrialization, population growth, and advancement in the use of modern technologies. However, overuse of these fossil fuel-based plastics has resulted in serious environmental and health hazards by causing pollution, global warming, etc. Therefore, the use of microalgae as a feedstock is a promising, green, and sustainable approach for the production of biobased plastics. Various biopolymers, such as polyhydroxybutyrate, polyurethane, polylactic acid, cellulose-based polymers, starch-based polymers, and protein-based polymers, can be produced from different strains of microalgae under varying culture conditions. Different techniques, including genetic engineering, metabolic engineering, the use of photobioreactors, response surface methodology, and artificial intelligence, are used to alter and improve microalgae stocks for the commercial synthesis of bioplastics at lower costs. In comparison to conventional plastics, these biobased plastics are biodegradable, biocompatible, recyclable, non-toxic, eco-friendly, and sustainable, with robust mechanical and thermoplastic properties. In addition, the bioplastics are suitable for a plethora of applications in the agriculture, construction, healthcare, electrical and electronics, and packaging industries. Thus, this review focuses on techniques for the production of biopolymers and bioplastics from microalgae. In addition, it discusses innovative and efficient strategies for large-scale bioplastic production while also providing insights into the life cycle assessment, end-of-life, and applications of bioplastics. Furthermore, some challenges affecting industrial scale bioplastics production and recommendations for future research are provided.
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Affiliation(s)
- Adegoke Isiaka Adetunji
- Centre for Mineral Biogeochemistry, University of the Free State, Bloemfontein 9301, South Africa
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4
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Beaver K, Dantanarayana A, Liou W, Babst M, Minteer SD. Extracellular Poly(hydroxybutyrate) Bioplastic Production Using Surface Display Techniques. ACS MATERIALS AU 2024; 4:174-178. [PMID: 38496045 PMCID: PMC10941272 DOI: 10.1021/acsmaterialsau.3c00059] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/19/2023] [Revised: 10/24/2023] [Accepted: 10/25/2023] [Indexed: 03/19/2024]
Abstract
Poly(hydroxybutyrate) is a biocompatible, biodegradable polyester synthesized naturally in a variety of microbial species. A greener alternative to petroleum-based plastics and sought after for biomedical applications, poly(hydroxybutyrate) has failed to break through as a leading material in the plastic industry due to its high cost of production. Specifically, the extraction of this material from within bacterial cells requires lysis of cells, which takes time, uses harsh chemicals, and starts the process again with growing new living cells. Recently, surface display of enzymes on bacterial membranes has become an emerging technique for extracellular biocatalysis. In this work, a fusion protein lpp-ompA-phaC was expressed in Escherichia coli to display the enzyme poly(hydroxyalkanoate) synthase on the cell surface. The resulting poly(hydroxybutyrate) product was chemically characterized by nuclear magnetic resonance and infrared spectroscopy. Finally, the extracellular synthesis of the bioplastic granules was demonstrated qualitatively via microscopy and quantitatively by flow cytometry. The results of this work are the first demonstration of extracellular synthesis of poly(hydroxybutyrate), showing promise for continuous and scalable synthesis of materials using surface display.
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Affiliation(s)
- Kevin Beaver
- Department
of Chemistry, University of Utah, Salt Lake City, Utah 84112, United
States
| | - Ashwini Dantanarayana
- Department
of Chemistry, University of Utah, Salt Lake City, Utah 84112, United
States
| | - Willisa Liou
- Electron
Microscopy Core Laboratory, University of
Utah, Salt Lake City, Utah 84112, United States
| | - Markus Babst
- Center
for Cell & Genome Science, University
of Utah, Salt Lake City, Utah 84112, United States
| | - Shelley D. Minteer
- Department
of Chemistry, University of Utah, Salt Lake City, Utah 84112, United
States
- Kummer
Institute Center for Resource Sustainability, Missouri University of Science and Technology, Rolla, Missouri 65409, United States
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5
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Espinoza JL, Phillips A, Prentice MB, Tan GS, Kamath PL, Lloyd KG, Dupont CL. Unveiling the Microbial Realm with VEBA 2.0: A modular bioinformatics suite for end-to-end genome-resolved prokaryotic, (micro)eukaryotic, and viral multi-omics from either short- or long-read sequencing. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.03.08.583560. [PMID: 38559265 PMCID: PMC10979853 DOI: 10.1101/2024.03.08.583560] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 04/04/2024]
Abstract
The microbiome is a complex community of microorganisms, encompassing prokaryotic (bacterial and archaeal), eukaryotic, and viral entities. This microbial ensemble plays a pivotal role in influencing the health and productivity of diverse ecosystems while shaping the web of life. However, many software suites developed to study microbiomes analyze only the prokaryotic community and provide limited to no support for viruses and microeukaryotes. Previously, we introduced the Viral Eukaryotic Bacterial Archaeal (VEBA) open-source software suite to address this critical gap in microbiome research by extending genome-resolved analysis beyond prokaryotes to encompass the understudied realms of eukaryotes and viruses. Here we present VEBA 2.0 with key updates including a comprehensive clustered microeukaryotic protein database, rapid genome/protein-level clustering, bioprospecting, non-coding/organelle gene modeling, genome-resolved taxonomic/pathway profiling, long-read support, and containerization. We demonstrate VEBA's versatile application through the analysis of diverse case studies including marine water, Siberian permafrost, and white-tailed deer lung tissues with the latter showcasing how to identify integrated viruses. VEBA represents a crucial advancement in microbiome research, offering a powerful and accessible platform that bridges the gap between genomics and biotechnological solutions.
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Affiliation(s)
- Josh L. Espinoza
- Department of Environment and Sustainability, J. Craig Venter Institute, La Jolla, CA 92037, USA
- Department of Genomic Medicine and Infectious Diseases, J. Craig Venter Institute, La Jolla, CA 92037, USA
| | - Allan Phillips
- Department of Environment and Sustainability, J. Craig Venter Institute, La Jolla, CA 92037, USA
- Department of Genomic Medicine and Infectious Diseases, J. Craig Venter Institute, La Jolla, CA 92037, USA
| | | | - Gene S. Tan
- Department of Genomic Medicine and Infectious Diseases, J. Craig Venter Institute, La Jolla, CA 92037, USA
| | - Pauline L. Kamath
- School of Food and Agriculture, University of Maine, Orono, ME 04469, USA
| | - Karen G. Lloyd
- Microbiology Department, University of Tennessee, Knoxville, TN 37917, USA
| | - Chris L. Dupont
- Department of Environment and Sustainability, J. Craig Venter Institute, La Jolla, CA 92037, USA
- Department of Genomic Medicine and Infectious Diseases, J. Craig Venter Institute, La Jolla, CA 92037, USA
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6
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Patel KG, Maynard RK, Ferguson LS, Broich ML, Bledsoe JC, Wood CC, Crane GH, Bramhall JA, Rust JM, Williams-Rhaesa A, Locklin JJ. Experimentally Determined Hansen Solubility Parameters of Biobased and Biodegradable Polyesters. ACS SUSTAINABLE CHEMISTRY & ENGINEERING 2024; 12:2386-2393. [PMID: 38362530 PMCID: PMC10865435 DOI: 10.1021/acssuschemeng.3c07284] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/07/2023] [Revised: 01/11/2024] [Accepted: 01/12/2024] [Indexed: 02/17/2024]
Abstract
Hansen solubility parameters (HSP) of 15 commercially relevant biobased and biodegradable polyesters were experimentally determined by applying a novel approach to the classic solubility study method. In this approach, the extent of swelling in polymer films was determined using a simple equation based on the mass difference between swollen and nonswollen film samples to obtain normalized solvent uptake (N). Using N and HSPiP software, highly accurate HSP values were obtained for all 15 polyesters. Qualitative evaluation of the HSP values was conducted by predicting the miscibility of poly(3-hydroxybutyrate-co-3-hydroxyhexanoate) (PHB-co-HHx, 7 mol % HHx) and poly(lactic acid) (PLA) with a novel lignin-based plasticizer (ethyl 3-(4-ethoxy-3-methoxyphenyl)propanoate, EP) with a relative energy difference (RED) less than 0.4. Additionally, an HSP-predicted plasticizer (di(2-ethylhexyl) adipate, DA) with a larger RED (>0.7) was used to demonstrate the effects of less-miscible additives. Plasticized samples were analyzed by differential scanning calorimetry and polarized optical microscopy (POM) to determine the Tg depression, with EP showing linear Tg depression up to 50% plasticizer loading, whereas DA shows minimal Tg depression past 10% loading. Further analysis by POM reveals that the DA phase separates from both polymers at loadings as low as 2.5% (PHB-co-HHx, 7 mol % HHx) and 5% (PLA), while the EP phase separates at a much higher loading of 50% (PHB-co-HHx, 7 mol% HHx) and 30% (PLA).
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Affiliation(s)
- Kush G. Patel
- School
of Chemical, Materials, and Biomedical Engineering, College of Engineering, University of Georgia, 597 D.W. Brooks Dr., Athens, Georgia 30602, United States
- New
Materials Institute, University of Georgia, 220 Riverbend R., Athens, Georgia 30602, United States
| | - Ryan K. Maynard
- Department
of Chemistry, Franklin College of Arts and Sciences, University of Georgia, 140 Cedar Street, Athens, Georgia 30602, United States
- New
Materials Institute, University of Georgia, 220 Riverbend R., Athens, Georgia 30602, United States
| | - Lawrence S. Ferguson
- New
Materials Institute, University of Georgia, 220 Riverbend R., Athens, Georgia 30602, United States
| | - Michael L. Broich
- School
of Chemical, Materials, and Biomedical Engineering, College of Engineering, University of Georgia, 597 D.W. Brooks Dr., Athens, Georgia 30602, United States
- New
Materials Institute, University of Georgia, 220 Riverbend R., Athens, Georgia 30602, United States
| | - Joshua C. Bledsoe
- Department
of Chemistry, Franklin College of Arts and Sciences, University of Georgia, 140 Cedar Street, Athens, Georgia 30602, United States
- New
Materials Institute, University of Georgia, 220 Riverbend R., Athens, Georgia 30602, United States
| | - Caitlin C. Wood
- Department
of Chemistry, Franklin College of Arts and Sciences, University of Georgia, 140 Cedar Street, Athens, Georgia 30602, United States
- New
Materials Institute, University of Georgia, 220 Riverbend R., Athens, Georgia 30602, United States
| | - Grant H. Crane
- New
Materials Institute, University of Georgia, 220 Riverbend R., Athens, Georgia 30602, United States
| | - Jessica A. Bramhall
- New
Materials Institute, University of Georgia, 220 Riverbend R., Athens, Georgia 30602, United States
| | - Jonathan M. Rust
- New
Materials Institute, University of Georgia, 220 Riverbend R., Athens, Georgia 30602, United States
| | - Amanda Williams-Rhaesa
- New
Materials Institute, University of Georgia, 220 Riverbend R., Athens, Georgia 30602, United States
| | - Jason J. Locklin
- School
of Chemical, Materials, and Biomedical Engineering, College of Engineering, University of Georgia, 597 D.W. Brooks Dr., Athens, Georgia 30602, United States
- Department
of Chemistry, Franklin College of Arts and Sciences, University of Georgia, 140 Cedar Street, Athens, Georgia 30602, United States
- New
Materials Institute, University of Georgia, 220 Riverbend R., Athens, Georgia 30602, United States
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7
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Oda K, Wlodawer A. Development of Enzyme-Based Approaches for Recycling PET on an Industrial Scale. Biochemistry 2024. [PMID: 38285602 DOI: 10.1021/acs.biochem.3c00554] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/31/2024]
Abstract
Pollution by plastics such as polyethylene (PE), polypropylene (PP), polyvinyl chloride (PVC), polyurethane (PUR), polyamide (PA), polystyrene (PS), and poly(ethylene terephthalate) (PET) is now gaining worldwide attention as a critical environmental issue, closely linked to climate change. Among them, PET is particularly prone to hydrolysis, breaking down into its constituents, ethylene glycol (EG) and terephthalate (TPA). Biorecycling or bioupcycling stands out as one of the most promising methods for addressing PET pollution. For dealing with pollution by the macrosize PET, a French company Carbios has developed a pilot-scale plant for biorecycling waste PET beverage bottles into new bottles using derivatives of thermophilic leaf compost cutinase (LCC). However, this system still provides significant challenges in its practical implementation. For the micro- or nanosize PET pollution that poses significant human health risks, including cancer, no industrial-scale approach has been established so far, despite the need to develop such technologies. In this Perspective, we explore the enhancement of the low activity and thermostability of the enzyme PETase to match that of LCC, along with the potential application of microbes and enzymes for the treatment of waste PET as microplastics. Additionally, we discuss the shortcomings of the current biorecycling protocols from a life cycle assessment perspective, covering aspects such as the diversity of PET-hydrolyzing enzymes in nature, the catalytic mechanism for crystallized PET, and more. We also provide an overview of the Ideonella sakaiensis system, highlighting its ability to operate and grow at moderate temperatures, in contrast to high-temperature processes.
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Affiliation(s)
- Kohei Oda
- Department of Applied Biology, Kyoto Institute of Technology, Matsugasaki, Sakyo-ku, Kyoto 606-8585, Japan
| | - Alexander Wlodawer
- Center for Structural Biology, National Cancer Institute, Frederick, Maryland 21702, United States
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8
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Sudhakar MP, Maurya R, Mehariya S, Karthikeyan OP, Dharani G, Arunkumar K, Pereda SV, Hernández-González MC, Buschmann AH, Pugazhendhi A. Feasibility of bioplastic production using micro- and macroalgae- A review. ENVIRONMENTAL RESEARCH 2024; 240:117465. [PMID: 37879387 DOI: 10.1016/j.envres.2023.117465] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/20/2023] [Revised: 10/03/2023] [Accepted: 10/20/2023] [Indexed: 10/27/2023]
Abstract
Plastic disposal and their degraded products in the environment are global concern due to its adverse effects and persistence in nature. To overcome plastic pollution and its impacts on environment, a sustainable bioplastic production using renewable feedstock's, such as algae, are envisioned. In this review, the production of polymer precursors such as polylactic acid, polyhydroxybutyrates, polyhydroxyalkanoates, agar, carrageenan and alginate from microalgae and macroalgae through direct conversion and fermentation routes are summarized and discussed. The direct conversion of algal biopolymers without any bioprocess (whole algal biomass used emphasizing zero waste discharge concept) favours economic feasibility. Whereas indirect method uses conversion of algal polymers to monomers after pretreatment followed by bioplastic precursor production by fermentation are emphasized. This review paper also outlines the current state of technological developments in the field of algae-based bioplastic, both in industry and in research, and highlights the creation of novel solutions for green bioplastic production employing algal polymers. Finally, the cost economics of the bioplastic production using algal biopolymers are clearly mentioned with future directions of next level bioplastic production. In this review study, the cost estimation was given at laboratory level bioplastic production using casting methods. Further development of bioplastics at pilot scale level may give clear economic feasibility of production at industry. Here, in this review, we emphasized the overview of algal biopolymers for different bioplastic product development and its economic value and also current industries involved in bioplastic production.
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Affiliation(s)
- Muthiyal Prabakaran Sudhakar
- Marine Biopolymers & Advanced Bioactive Materials Research Lab, Department of Prosthodontics, Saveetha Dental College and Hospitals, Saveetha Institute of Medical and Technical Sciences (SIMATS), Saveetha University, Chennai, 600 077, Tamil Nadu, India; Marine Biotechnology Division, Ocean Science and Technology for Islands, National Institute of Ocean Technology, Ministry of Earth Sciences, Govt. of India, Pallikaranai, Chennai, 600100, Tamil Nadu, India.
| | - Rahulkumar Maurya
- Coastal Algae Cultivation, Microbial Biofuels & Biochemicals, Advanced Biofuels Division, The Energy and Resources Institute, Navi Mumbai, 400 708, India
| | | | - Obulisamy Parthiba Karthikeyan
- Department of Engineering Technology, College of Technology, University of Houston, Houston, TX, USA; Institute of Bioresource and Agriculture, Hong Kong Baptist University, Kowloon Tong, Hong Kong, SAR, China; Department of Civil and Environmental Engineering, South Dakota School of Mines and Technology, Rapid City, SD, USA
| | - Gopal Dharani
- Marine Biotechnology Division, Ocean Science and Technology for Islands, National Institute of Ocean Technology, Ministry of Earth Sciences, Govt. of India, Pallikaranai, Chennai, 600100, Tamil Nadu, India
| | - Kulanthiyesu Arunkumar
- Microalgae Group-Phycoscience Laboratory, Department of Plant Science, School of Biological Sciences, Central University of Kerala, Periye, 671 320, Kasaragod, Kerala, India
| | - Sandra V Pereda
- Centro i-mar, CeBiB and Núcleo Milenio MASH, Universidad de Los Lagos, 5480000, Puerto Montt, Región de Los Lagos, Chile
| | - María C Hernández-González
- Centro i-mar, CeBiB and Núcleo Milenio MASH, Universidad de Los Lagos, 5480000, Puerto Montt, Región de Los Lagos, Chile
| | - Alejandro H Buschmann
- Centro i-mar, CeBiB and Núcleo Milenio MASH, Universidad de Los Lagos, 5480000, Puerto Montt, Región de Los Lagos, Chile
| | - Arivalagan Pugazhendhi
- School of Engineering, Lebanese American University, Byblos, Lebanon; Centre for Herbal Pharmacology and Environmental Sustainability, Chettinad Hospital and Research Institute, Chettinad Academy of Research and Education, Kelambakkam, 603103, Tamil Nadu, India.
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9
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Abbriano RM, George J, Kahlke T, Commault AS, Fabris M. Mobilization of a diatom mutator-like element (MULE) transposon inactivates the uridine monophosphate synthase (UMPS) locus in Phaeodactylum tricornutum. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2023; 115:926-936. [PMID: 37147901 DOI: 10.1111/tpj.16271] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/03/2023] [Revised: 04/18/2023] [Accepted: 04/29/2023] [Indexed: 05/07/2023]
Abstract
Diatoms are photosynthetic unicellular microalgae that drive global ecological phenomena in the biosphere and are emerging as sustainable feedstock for an increasing number of industrial applications. Diatoms exhibit enormous taxonomic and genetic diversity, which often results in peculiar biochemical and biological traits. Transposable elements (TEs) represent a substantial portion of diatom genomes and have been hypothesized to exert a relevant role in enriching genetic diversity and making a core contribution to genome evolution. Here, through long-read whole-genome sequencing, we identified a mutator-like element (MULE) in the model diatom Phaeodactylum tricornutum, and we report the direct observation of its mobilization within the course of a single laboratory experiment. Under selective conditions, this TE inactivated the uridine monophosphate synthase (UMPS) gene of P. tricornutum, one of the few endogenous genetic loci currently targeted for selectable auxotrophy for functional genetics and genome-editing applications. We report the observation of a recently mobilized transposon in diatoms with unique features. These include the combined presence of a MULE transposase with zinc-finger SWIM-type domains and a diatom-specific E3 ubiquitin ligase of the zinc-finger UBR type, which are suggestive of a mobilization mechanism. Our findings provide new elements for the understanding of the role of TEs in diatom genome evolution and in the enrichment of intraspecific genetic variability.
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Affiliation(s)
- Raffaela M Abbriano
- Climate Change Cluster, University of Technology, 15 Broadway, Ultimo, NSW, 2007, Australia
| | - Jestin George
- Climate Change Cluster, University of Technology, 15 Broadway, Ultimo, NSW, 2007, Australia
| | - Tim Kahlke
- Climate Change Cluster, University of Technology, 15 Broadway, Ultimo, NSW, 2007, Australia
| | - Audrey S Commault
- Climate Change Cluster, University of Technology, 15 Broadway, Ultimo, NSW, 2007, Australia
| | - Michele Fabris
- Climate Change Cluster, University of Technology, 15 Broadway, Ultimo, NSW, 2007, Australia
- CSIRO Synthetic Biology Future Science Platform, GPO Box 2583, Brisbane, QLD, 4001, Australia
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10
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Arora Y, Sharma S, Sharma V. Microalgae in Bioplastic Production: A Comprehensive Review. ARABIAN JOURNAL FOR SCIENCE AND ENGINEERING 2023; 48:7225-7241. [PMID: 37266400 PMCID: PMC10183103 DOI: 10.1007/s13369-023-07871-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/05/2022] [Accepted: 03/28/2023] [Indexed: 06/03/2023]
Abstract
The current era of industrialization includes a constantly increasing demand for plastic products, but because plastics are rarely recycled and are not biodegradable plastic pollution or "white pollution" has been the result. The consumption of petroleum-based plastics will be 20% of global annual oil by 2050, and thus there is an inevitable need to find an innovative solution to reduce plastic pollution. The biodegradable and environmentally benign bioplastics are suitable alternative to fossil-based plastics in the market due to sustainability, less carbon footprint, lower toxicity and high degradability rate. Microalgal species is an innovative approach to be explored and improved for bioplastic production. Microalgae are generally present in abundant quantity in our ecosystem, and polysaccharide in the algae can be processed and utilized to make biopolymers. Also, these species have a high growth rate and can be easily cultivated in wastewater streams. The review aims to determine the recent status of bioplastic production techniques from microalgal species and also reveal optimization opportunities involved in the process. Several strategies for bioplastic production from algal biomass are being discussed nowadays, and the most prominent are "with blending" (blending of algal biomass with bioplastics and starch) and "without blending" (microalgae as a feedstock for polyhydroxyalkanoates production). The advanced research on modern bioengineering techniques and well-established genetic tools like CRISPR-Cas9 should be encouraged to develop recombinant microalgae strains with elevated levels of PHA/PHB inside the cell.
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Affiliation(s)
- Yukta Arora
- Department of Molecular Biology and Genetic Engineering, School of Bioengineering and Biosciences, Lovely Professional University, Phagwara, Jalandhar, Punjab India
| | - Shivika Sharma
- Biochemical Conversion Division, SSS-NIBE, Kapurthala, Punjab India
| | - Vikas Sharma
- Department of Molecular Biology and Genetic Engineering, School of Bioengineering and Biosciences, Lovely Professional University, Phagwara, Jalandhar, Punjab India
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11
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Cheah WY, Er AC, Aiyub K, Yasin NHM, Ngan S, Chew KW, Khoo KS, Ling TC, Juan JC, Ma Z, Show PL. Current status and perspectives of algae-based bioplastics: A reviewed potential for sustainability. ALGAL RES 2023. [DOI: 10.1016/j.algal.2023.103078] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/05/2023]
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12
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Sangtani R, Nogueira R, Yadav AK, Kiran B. Systematizing Microbial Bioplastic Production for Developing Sustainable Bioeconomy: Metabolic Nexus Modeling, Economic and Environmental Technologies Assessment. JOURNAL OF POLYMERS AND THE ENVIRONMENT 2023; 31:2741-2760. [PMID: 36811096 PMCID: PMC9933833 DOI: 10.1007/s10924-023-02787-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Accepted: 01/30/2023] [Indexed: 06/12/2023]
Abstract
The excessive usage of non-renewable resources to produce plastic commodities has incongruously influenced the environment's health. Especially in the times of COVID-19, the need for plastic-based health products has increased predominantly. Given the rise in global warming and greenhouse gas emissions, the lifecycle of plastic has been established to contribute to it significantly. Bioplastics such as polyhydroxy alkanoates, polylactic acid, etc. derived from renewable energy origin have been a magnificent alternative to conventional plastics and reconnoitered exclusively for combating the environmental footprint of petrochemical plastic. However, the economically reasonable and environmentally friendly procedure of microbial bioplastic production has been a hard nut to crack due to less scouted and inefficient process optimization and downstream processing methodologies. Thereby, meticulous employment of computational tools such as genome-scale metabolic modeling and flux balance analysis has been practiced in recent times to understand the effect of genomic and environmental perturbations on the phenotype of the microorganism. In-silico results not only aid us in determining the biorefinery abilities of the model microorganism but also curb our reliance on equipment, raw materials, and capital investment for optimizing the best conditions. Additionally, to accomplish sustainable large-scale production of microbial bioplastic in a circular bioeconomy, extraction, and refinement of bioplastic needs to be investigated extensively by practicing techno-economic analysis and life cycle assessment. This review put forth state-of-the-art know-how on the proficiency of these computational techniques in laying the foundation of an efficient bioplastic manufacturing blueprint, chiefly focusing on microbial polyhydroxy alkanoates (PHA) production and its efficacy in outplacing fossil based plastic products.
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Affiliation(s)
- Rimjhim Sangtani
- Department of Biosciences and Biomedical Engineering, Indian Institute of Technology, 453552, Indore, India
| | - Regina Nogueira
- Institute for Sanitary Engineering and Waste Management, Leibniz Universität Hannover, Hannover, Germany
| | - Asheesh Kumar Yadav
- CSIR-Institute of Minerals and Materials Technology, Bhubaneswar, Odisha 751013 India
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, Uttar Pradesh 201002 India
| | - Bala Kiran
- Department of Biosciences and Biomedical Engineering, Indian Institute of Technology, 453552, Indore, India
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13
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Jung HJ, Kim SH, Cho DH, Kim BC, Bhatia SK, Lee J, Jeon JM, Yoon JJ, Yang YH. Finding of Novel Galactose Utilizing Halomonas sp. YK44 for Polyhydroxybutyrate (PHB) Production. Polymers (Basel) 2022; 14:polym14245407. [PMID: 36559775 PMCID: PMC9782037 DOI: 10.3390/polym14245407] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/03/2022] [Revised: 11/26/2022] [Accepted: 12/08/2022] [Indexed: 12/14/2022] Open
Abstract
Polyhydroxybutyrate (PHB) is a biodegradable bioplastic with potential applications as an alternative to petroleum-based plastics. However, efficient PHB production remains difficult. The main cost of PHB production is attributed to carbon sources; hence, finding inexpensive sources is important. Galactose is a possible substrate for polyhydroxyalkanoate production as it is abundant in marine environments. Marine bacteria that produce PHB from galactose could be an effective resource that can be used for efficient PHB production. In this study, to identify a galactose utilizing PHB producer, we examined 16 Halomonas strains. We demonstrated that Halomonas cerina (Halomonas sp. YK44) has the highest growth and PHB production using a culture media containing 2% galactose, final 4% NaCl, and 0.1% yeast extract. These culture conditions yielded 8.98 g/L PHB (78.1% PHB content (w/w)). When galactose-containing red algae (Eucheuma spinosum) hydrolysates were used as a carbon source, 5.2 g/L PHB was produced with 1.425% galactose after treatment with activated carbon. Since high salt conditions can be used to avoid sterilization, we examined whether Halomonas sp. YK44 could produce PHB in non-sterilized conditions. Culture media in these conditions yielded 72.41% PHB content. Thus, Halomonas sp. YK44 is robust against contamination, allowing for long-term culture and economical PHB production.
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Affiliation(s)
- Hee Ju Jung
- Department of Biological Engineering, College of Engineering, Konkuk University, Seoul 05029, Republic of Korea
| | - Su Hyun Kim
- Department of Biological Engineering, College of Engineering, Konkuk University, Seoul 05029, Republic of Korea
| | - Do Hyun Cho
- Department of Biological Engineering, College of Engineering, Konkuk University, Seoul 05029, Republic of Korea
| | - Byung Chan Kim
- Department of Biological Engineering, College of Engineering, Konkuk University, Seoul 05029, Republic of Korea
| | - Shashi Kant Bhatia
- Department of Biological Engineering, College of Engineering, Konkuk University, Seoul 05029, Republic of Korea
- Institute for Ubiquitous Information Technology and Applications, Konkuk University, Seoul 05029, Republic of Korea
| | - Jongbok Lee
- Department of Biological and Chemical Engineering, Hongik University, Sejong 30016, Republic of Korea
| | - Jong-Min Jeon
- Green & Sustainable Materials R&D Department, Research Institute of Clean Manufacturing System, Korea Institute of Industrial Technology (KITECH), Cheonan 31056, Republic of Korea
| | - Jeong-Jun Yoon
- Green & Sustainable Materials R&D Department, Research Institute of Clean Manufacturing System, Korea Institute of Industrial Technology (KITECH), Cheonan 31056, Republic of Korea
| | - Yung-Hun Yang
- Department of Biological Engineering, College of Engineering, Konkuk University, Seoul 05029, Republic of Korea
- Institute for Ubiquitous Information Technology and Applications, Konkuk University, Seoul 05029, Republic of Korea
- Correspondence: ; Tel.: +82-2-450-2-3936
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14
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Emerging Trends of Nanotechnology and Genetic Engineering in Cyanobacteria to Optimize Production for Future Applications. LIFE (BASEL, SWITZERLAND) 2022; 12:life12122013. [PMID: 36556378 PMCID: PMC9781209 DOI: 10.3390/life12122013] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/02/2022] [Revised: 11/20/2022] [Accepted: 11/28/2022] [Indexed: 12/12/2022]
Abstract
Nanotechnology has the potential to revolutionize various fields of research and development. Multiple nanoparticles employed in a nanotechnology process are the magic elixir that provides unique features that are not present in the component's natural form. In the framework of contemporary research, it is inappropriate to synthesize microparticles employing procedures that include noxious elements. For this reason, scientists are investigating safer ways to produce genetically improved Cyanobacteria, which has many novel features and acts as a potential candidate for nanoparticle synthesis. In recent decades, cyanobacteria have garnered significant interest due to their prospective nanotechnological uses. This review will outline the applications of genetically engineered cyanobacteria in the field of nanotechnology and discuss its challenges and future potential. The evolution of cyanobacterial strains by genetic engineering is subsequently outlined. Furthermore, the recombination approaches that may be used to increase the industrial potential of cyanobacteria are discussed. This review provides an overview of the research undertaken to increase the commercial avenues of cyanobacteria and attempts to explain prospective topics for future research.
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15
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Al-Khairy D, Fu W, Alzahmi AS, Twizere JC, Amin SA, Salehi-Ashtiani K, Mystikou A. Closing the Gap between Bio-Based and Petroleum-Based Plastic through Bioengineering. Microorganisms 2022; 10:microorganisms10122320. [PMID: 36557574 PMCID: PMC9787566 DOI: 10.3390/microorganisms10122320] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/14/2022] [Revised: 11/17/2022] [Accepted: 11/21/2022] [Indexed: 11/25/2022] Open
Abstract
Bioplastics, which are plastic materials produced from renewable bio-based feedstocks, have been investigated for their potential as an attractive alternative to petroleum-based plastics. Despite the harmful effects of plastic accumulation in the environment, bioplastic production is still underdeveloped. Recent advances in strain development, genome sequencing, and editing technologies have accelerated research efforts toward bioplastic production and helped to advance its goal of replacing conventional plastics. In this review, we highlight bioengineering approaches, new advancements, and related challenges in the bioproduction and biodegradation of plastics. We cover different types of polymers, including polylactic acid (PLA) and polyhydroxyalkanoates (PHAs and PHBs) produced by bacterial, microalgal, and plant species naturally as well as through genetic engineering. Moreover, we provide detailed information on pathways that produce PHAs and PHBs in bacteria. Lastly, we present the prospect of using large-scale genome engineering to enhance strains and develop microalgae as a sustainable production platform.
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Affiliation(s)
- Dina Al-Khairy
- Division of Science and Math, New York University Abu Dhabi, Abu Dhabi 129188, United Arab Emirates
| | - Weiqi Fu
- Division of Science and Math, New York University Abu Dhabi, Abu Dhabi 129188, United Arab Emirates
- Department of Marine Science, Ocean College, Zhejiang University & Donghai Laboratory, Zhoushan 316021, China
| | - Amnah Salem Alzahmi
- Division of Science and Math, New York University Abu Dhabi, Abu Dhabi 129188, United Arab Emirates
- Center for Genomics and Systems Biology (CGSB), Institute Abu Dhabi, New York University Abu Dhabi, Abu Dhabi 129188, United Arab Emirates
| | - Jean-Claude Twizere
- Division of Science and Math, New York University Abu Dhabi, Abu Dhabi 129188, United Arab Emirates
- Laboratory of Viral Interactomes Networks, Unit of Molecular Biology of Diseases, Interdisciplinary Cluster for Applied Genoproteomics (GIGA Institute), University of Liège, 4000 Liège, Belgium
| | - Shady A. Amin
- Division of Science and Math, New York University Abu Dhabi, Abu Dhabi 129188, United Arab Emirates
- Center for Genomics and Systems Biology (CGSB), Institute Abu Dhabi, New York University Abu Dhabi, Abu Dhabi 129188, United Arab Emirates
| | - Kourosh Salehi-Ashtiani
- Division of Science and Math, New York University Abu Dhabi, Abu Dhabi 129188, United Arab Emirates
- Center for Genomics and Systems Biology (CGSB), Institute Abu Dhabi, New York University Abu Dhabi, Abu Dhabi 129188, United Arab Emirates
- Correspondence: (K.S.-A.); (A.M.)
| | - Alexandra Mystikou
- Division of Science and Math, New York University Abu Dhabi, Abu Dhabi 129188, United Arab Emirates
- Center for Genomics and Systems Biology (CGSB), Institute Abu Dhabi, New York University Abu Dhabi, Abu Dhabi 129188, United Arab Emirates
- Correspondence: (K.S.-A.); (A.M.)
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Nishshanka GKSH, Anthonio RADP, Nimarshana PHV, Ariyadasa TU, Chang JS. Marine microalgae as sustainable feedstock for multi-product biorefineries. Biochem Eng J 2022. [DOI: 10.1016/j.bej.2022.108593] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/02/2022]
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17
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Nanda N, Bharadvaja N. Algal bioplastics: current market trends and technical aspects. CLEAN TECHNOLOGIES AND ENVIRONMENTAL POLICY 2022; 24:2659-2679. [PMID: 35855786 PMCID: PMC9281343 DOI: 10.1007/s10098-022-02353-7] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/28/2022] [Accepted: 06/16/2022] [Indexed: 06/15/2023]
Abstract
Abstract Plastics are undebatably a hot topic of discussion across international forums due to their huge ecological footprint. The onset of COVID-19 pandemic has exacerbated the issue in an irreversible manner. Bioplastics produced from renewable sources are a result of lookout for sustainable alternatives. Replacing a ton of synthetic plastics with biobased ones reduces 1.8 tons CO2 emissions. Here, we begin with highlighting the problem statement-Plastic accumulation and its associated negative impacts. Microalgae outperforms plants and microbes, when used to produce bioplastic due to superior growth rate, non-competitive nature to food, and simultaneous wastewater remediation. They have minimal nutrient requirements and less dependency on climatic conditions for cultivation. These are the reasons for current boom in the algal bioplastic market. However, it is still not at par in price with the petroleum-based plastics. A brief market research has been done to better evaluate the current global status and future scope of algal bioplastics. The objective of this review is to propose possible solutions to resolve the challenges in scale up of bioplastic industry. Various bioplastic production technologies have been comprehensively discussed along with their optimization strategies. Overall studies discussed show that in order to make it cost competitive adopting a multi-dimensional approach like algal biorefinery is the best way out. A holistic comparison of any bio-based alternative with its conventional counterpart is imperative to assess its impact upon commercialization. Therefore, the review concludes with the life cycle assessment of bioplastics and measures to improve their inclusivity in a circular economy. Graphical Abstract
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Affiliation(s)
- Neha Nanda
- Plant Biotechnology Laboratory, Department of Biotechnology, Delhi Technological University, Shahbad Daulatpur, Main Bawana Road, Delhi, 110042 India
| | - Navneeta Bharadvaja
- Plant Biotechnology Laboratory, Department of Biotechnology, Delhi Technological University, Shahbad Daulatpur, Main Bawana Road, Delhi, 110042 India
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18
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Kumari P, Ravi Kiran B, Venkata Mohan S. Polyhydroxybutyrate production by Chlorella sorokiniana SVMIICT8 under Nutrient-deprived mixotrophy. BIORESOURCE TECHNOLOGY 2022; 354:127135. [PMID: 35405214 DOI: 10.1016/j.biortech.2022.127135] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/04/2022] [Revised: 04/04/2022] [Accepted: 04/05/2022] [Indexed: 06/14/2023]
Abstract
Polyhydroxybutyrates (PHBs) are naturally occurring biopolymeric compounds that accumulate in a variety of microorganisms, including microalgae as energy and carbon storage sources. The present study was designed to evaluate nature-based PHB production using microalgae (Chlorella sorokiniana SVMIICT8) in biphasic (growth (GP) and stress phase (SP)) nutritional mode of cultivation. Microalgal PHB accumulation was driven by nutrient constraint, with a maximal production of 29.5% of PHB from 0.94 gm L-1 of biomass. Fluorescence microscopy revealed PHB granules in the cell cytoplasm, while NMR (1H and 13C), XRD and TGA analysis confirmed the structure. The biopolymer obtained was homopolymer of PHB with carbonyl (C=O) stretch of the aliphatic ester moiety. In GC-MS analysis, major peak representing butyric acid methyl ester also confirmed the PHB. Chlorophyll a fluorescence transients inferred through OJIP, exhibited significant variation in photosynthetic process during growth and nutrient limiting conditions. Mining of bio-based products from microalgae cultivation embrace nature-based approach addressing climate change and sustainability inclusively.
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Affiliation(s)
- Poonam Kumari
- Bioengineering and Environmental Sciences Lab, Department of Energy and Environmental Engineering, CSIR-Indian Institute of Chemical Technology (CSIR-IICT), Hyderabad 500007, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad 201002, India
| | - Boda Ravi Kiran
- Bioengineering and Environmental Sciences Lab, Department of Energy and Environmental Engineering, CSIR-Indian Institute of Chemical Technology (CSIR-IICT), Hyderabad 500007, India
| | - S Venkata Mohan
- Bioengineering and Environmental Sciences Lab, Department of Energy and Environmental Engineering, CSIR-Indian Institute of Chemical Technology (CSIR-IICT), Hyderabad 500007, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad 201002, India.
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19
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Krohn I, Menanteau‐Ledouble S, Hageskal G, Astafyeva Y, Jouannais P, Nielsen JL, Pizzol M, Wentzel A, Streit WR. Health benefits of microalgae and their microbiomes. Microb Biotechnol 2022; 15:1966-1983. [PMID: 35644921 PMCID: PMC9249335 DOI: 10.1111/1751-7915.14082] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/29/2021] [Revised: 05/10/2022] [Accepted: 05/11/2022] [Indexed: 12/16/2022] Open
Abstract
Microalgae comprise a phylogenetically very diverse group of photosynthetic unicellular pro‐ and eukaryotic organisms growing in marine and other aquatic environments. While they are well explored for the generation of biofuels, their potential as a source of antimicrobial and prebiotic substances have recently received increasing interest. Within this framework, microalgae may offer solutions to the societal challenge we face, concerning the lack of antibiotics treating the growing level of antimicrobial resistant bacteria and fungi in clinical settings. While the vast majority of microalgae and their associated microbiota remain unstudied, they may be a fascinating and rewarding source for novel and more sustainable antimicrobials and alternative molecules and compounds. In this review, we present an overview of the current knowledge on health benefits of microalgae and their associated microbiota. Finally, we describe remaining issues and limitation, and suggest several promising research potentials that should be given attention.
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Affiliation(s)
- Ines Krohn
- Department of Microbiology and Biotechnology University of Hamburg Hamburg Germany
| | | | - Gunhild Hageskal
- Department of Biotechnology and Nanomedicine SINTEF Industry Trondheim Norway
| | - Yekaterina Astafyeva
- Department of Microbiology and Biotechnology University of Hamburg Hamburg Germany
| | | | - Jeppe Lund Nielsen
- Department for Chemistry and Bioscience Aalborg University Aalborg Denmark
| | - Massimo Pizzol
- Department of Planning Aalborg University Aalborg Denmark
| | - Alexander Wentzel
- Department of Biotechnology and Nanomedicine SINTEF Industry Trondheim Norway
| | - Wolfgang R. Streit
- Department of Microbiology and Biotechnology University of Hamburg Hamburg Germany
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20
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Chen J, Huang Y, Shu Y, Hu X, Wu D, Jiang H, Wang K, Liu W, Fu W. Recent Progress on Systems and Synthetic Biology of Diatoms for Improving Algal Productivity. Front Bioeng Biotechnol 2022; 10:908804. [PMID: 35646842 PMCID: PMC9136054 DOI: 10.3389/fbioe.2022.908804] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2022] [Accepted: 04/29/2022] [Indexed: 11/13/2022] Open
Abstract
Microalgae have drawn much attention for their potential applications as a sustainable source for developing bioactive compounds, functional foods, feeds, and biofuels. Diatoms, as one major group of microalgae with high yields and strong adaptability to the environment, have shown advantages in developing photosynthetic cell factories to produce value-added compounds, including heterologous bioactive products. However, the commercialization of diatoms has encountered several obstacles that limit the potential mass production, such as the limitation of algal productivity and low photosynthetic efficiency. In recent years, systems and synthetic biology have dramatically improved the efficiency of diatom cell factories. In this review, we discussed first the genome sequencing and genome-scale metabolic models (GEMs) of diatoms. Then, approaches to optimizing photosynthetic efficiency are introduced with a focus on the enhancement of biomass productivity in diatoms. We also reviewed genome engineering technologies, including CRISPR (clustered regularly interspaced short palindromic repeats) gene-editing to produce bioactive compounds in diatoms. Finally, we summarized the recent progress on the diatom cell factory for producing heterologous compounds through genome engineering to introduce foreign genes into host diatoms. This review also pinpointed the bottlenecks in algal engineering development and provided critical insights into the future direction of algal production.
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Affiliation(s)
- Jiwei Chen
- Department of Marine Science, Ocean College, Zhejiang University, Hangzhou, China
| | - Yifan Huang
- Department of Marine Science, Ocean College, Zhejiang University, Hangzhou, China
| | - Yuexuan Shu
- Department of Marine Science, Ocean College, Zhejiang University, Hangzhou, China
| | - Xiaoyue Hu
- Center for Data Science, Zhejiang University, Hangzhou, China
- School of Mathematical Sciences, Zhejiang University, Hangzhou, China
| | - Di Wu
- Department of Marine Science, Ocean College, Zhejiang University, Hangzhou, China
| | - Hangjin Jiang
- Center for Data Science, Zhejiang University, Hangzhou, China
| | - Kui Wang
- Department of Marine Science, Ocean College, Zhejiang University, Hangzhou, China
| | - Weihua Liu
- School of Mathematical Sciences, Zhejiang University, Hangzhou, China
| | - Weiqi Fu
- Department of Marine Science, Ocean College, Zhejiang University, Hangzhou, China
- Center for Systems Biology and Faculty of Industrial Engineering, Mechanical Engineering and Computer Science, School of Engineering and Natural Sciences, University of Iceland, Reykjavik, Iceland
- *Correspondence: Weiqi Fu,
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21
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Behera S, Priyadarshanee M, Das S. Polyhydroxyalkanoates, the bioplastics of microbial origin: Properties, biochemical synthesis, and their applications. CHEMOSPHERE 2022; 294:133723. [PMID: 35085614 DOI: 10.1016/j.chemosphere.2022.133723] [Citation(s) in RCA: 20] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/24/2021] [Revised: 01/13/2022] [Accepted: 01/20/2022] [Indexed: 06/14/2023]
Abstract
The rising plastic pollution deteriorates the environment significantly as these petroleum-based plastics are not biodegradable, and their production requires natural fuels (energy source) and other resources. Polyhydroxyalkanoates (PHAs) are bioplastic and a sustainable and eco-friendly alternative to synthetic plastics. PHAs can be entirely synthesized using various microorganisms such as bacteria, algae, and fungi. These value-added biopolymers show promising properties such as enhanced biodegradability, biocompatibility, and other chemo-mechanical properties. Further, it has been established that the properties of PHA polymers depend on the substrates and chemical composition (monomer unit) of these polymers. PHAs hold great potential as an alternative to petroleum-based polymers, and further research for economic production and utilization of these biopolymers is required. The review describes the synthesis mechanism and different properties of microbially synthesized PHAs for various applications. The classification of PHAs and the multiple techniques necessary for their detection and evaluation have been discussed. In addition, the synthesis mechanism involving the genetic regulation of these biopolymers in various microbial groups has been described. This review provides information on various commercially available PHAs and their application in multiple sectors. The industrial production of these microbially synthesized polymers and the different extraction methods have been reviewed in detail. Furthermore, the review provides an insight into the potential applications of this biopolymer in environmental, industrial, and biomedical applications.
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Affiliation(s)
- Shivananda Behera
- Laboratory of Environmental Microbiology and Ecology (LEnME), Department of Life Science, National Institute of Technology, Rourkela, 769 008, Odisha, India
| | - Monika Priyadarshanee
- Laboratory of Environmental Microbiology and Ecology (LEnME), Department of Life Science, National Institute of Technology, Rourkela, 769 008, Odisha, India
| | - Surajit Das
- Laboratory of Environmental Microbiology and Ecology (LEnME), Department of Life Science, National Institute of Technology, Rourkela, 769 008, Odisha, India.
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22
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Mal N, Satpati G, Raghunathan S, Davoodbasha M. Current strategies on algae-based biopolymer production and scale-up. CHEMOSPHERE 2022; 289:133178. [PMID: 34890607 DOI: 10.1016/j.chemosphere.2021.133178] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/07/2021] [Revised: 11/15/2021] [Accepted: 12/02/2021] [Indexed: 06/13/2023]
Abstract
The craving for an alternative to the existing plastic products gives rise to the concept of algae-based bioplastic production, which appears to be excellently biodegradable and cost-effective. The significant assortment of algal biopolymers draws great attention to stop the surge of plastic waste and to mitigate the burning problems of environmental pollution. The polyhydroxyalkanoates (PHA) are naturally-occurring biopolymers found in the form of esters accumulated within a number of microbes, which provides the pillar for several biomolecules. This review summarizes the global scenario as well as the precise technique of algae-based PHA extraction and bioplastic production. In addition, different techniques for valorisation of PHA production, its biodegradability and its commercial applications are also taken into consideration.
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Affiliation(s)
- Navonil Mal
- Department of Botany, University of Calcutta, Kolkata, 700019, West Bengal, India
| | - GourGopal Satpati
- Department of Botany, Bangabasi Evening College, University of Calcutta, Kolkata, 700009, West Bengal, India.
| | - Sathya Raghunathan
- School of Life Sciences, B.S. Abdur Rahman Crescent Institute of Science and Technology, Chennai, India.
| | - MubarakAli Davoodbasha
- School of Life Sciences, B.S. Abdur Rahman Crescent Institute of Science and Technology, Chennai, India; Centre for Micro Algal and Nano Biotechnology (CeMANT), Crescent Innovation and Incubation Council (CIIC), B.S. Abdur Rahman Crescent Institute of Science and Technology, Chennai, India; Division of Bioengineering, Incheon National University, Republic of Korea.
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23
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Samadhiya K, Sangtani R, Nogueira R, Bala K. Insightful Advancement and Opportunities for Microbial Bioplastic Production. Front Microbiol 2022; 12:674864. [PMID: 35058887 PMCID: PMC8763809 DOI: 10.3389/fmicb.2021.674864] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/02/2021] [Accepted: 11/11/2021] [Indexed: 12/28/2022] Open
Abstract
Impetuous urbanization and population growth are driving increased demand for plastics to formulate impeccable industrial and biomedical commodities. The everlasting nature and excruciating waste management of petroleum-based plastics have catered to numerous challenges for the environment. However, just implementing various end-of-life management techniques for assimilation and recycling plastics is not a comprehensive remedy; instead, the extensive reliance on finite resources needs to be reduced for sustainable production and plastic product utilization. Microorganisms, such as bacteria and algae, are explored substantially for their bioplastic production repertoire, thus replacing fossil-based plastics sooner or later. Nevertheless, the utilization of pure microbial cultures has led to various operational and economical complications, opening the ventures for the usage of mixed microbial cultures (MMCs) consisting of bacteria and algae for sustainable production of bioplastic. The current review is primarily focuses on elaborating the bioplastic production capabilities of different bacterial and algal strains, followed by discussing the quintessence of MMCs. The present state-of-the-art of bioplastic, different types of bacterial bioplastic, microalgal biocomposites, operational factors influencing the quality and quantity of bioplastic precursors, embracing the potential of bacteria-algae consortia, and the current global status quo of bioplastic production has been summarized extensively.
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Affiliation(s)
- Kanchan Samadhiya
- Department of Biosciences and Biomedical Engineering, Indian Institute of Technology, Indore, India
| | - Rimjhim Sangtani
- Department of Biosciences and Biomedical Engineering, Indian Institute of Technology, Indore, India
| | - Regina Nogueira
- Institute for Sanitary Engineering and Waste Management, Leibniz Universitaet Hannover, Hanover, Germany
| | - Kiran Bala
- Department of Biosciences and Biomedical Engineering, Indian Institute of Technology, Indore, India
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24
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Aswathi Mohan A, Robert Antony A, Greeshma K, Yun JH, Ramanan R, Kim HS. Algal biopolymers as sustainable resources for a net-zero carbon bioeconomy. BIORESOURCE TECHNOLOGY 2022; 344:126397. [PMID: 34822992 DOI: 10.1016/j.biortech.2021.126397] [Citation(s) in RCA: 11] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/12/2021] [Revised: 11/15/2021] [Accepted: 11/17/2021] [Indexed: 06/13/2023]
Abstract
The era for eco-friendly polymers was ushered by the marine plastic menace and with the discovery of emerging pollutants such as micro-, nano-plastics, and plastic leachates from fossil fuel-based polymers. This review investigates algae-derived natural, carbon neutral polysaccharides and polyesters, their structure, biosynthetic mechanisms, biopolymers and biocomposites production process, followed by biodegradability of the polymers. The review proposes acceleration of research in this promising area to address the need for eco-friendly polymers and to increase the cost-effectiveness of algal biorefineries by coupling biofuel, high-value products, and biopolymer production using waste and wastewater-grown algal biomass. Such a strategy improves overall sustainability by lowering costs and carbon emissions in algal biorefineries, eventually contributing towards the much touted circular, net-zero carbon future economies. Finally, this review analyses the evolution of citation networks, which in turn highlight the emergence of a new frontier of sustainable polymers from algae.
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Affiliation(s)
- A Aswathi Mohan
- Sustainable Resources Laboratory, Department of Environmental Science, Central University of Kerala, Tejaswini Hills, Periya, Kasaragod, Kerala 671316, India
| | - Aiswarya Robert Antony
- Sustainable Resources Laboratory, Department of Environmental Science, Central University of Kerala, Tejaswini Hills, Periya, Kasaragod, Kerala 671316, India
| | - Kozhumal Greeshma
- Sustainable Resources Laboratory, Department of Environmental Science, Central University of Kerala, Tejaswini Hills, Periya, Kasaragod, Kerala 671316, India
| | - Jin-Ho Yun
- Cell Factory Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon, Republic of Korea
| | - Rishiram Ramanan
- Sustainable Resources Laboratory, Department of Environmental Science, Central University of Kerala, Tejaswini Hills, Periya, Kasaragod, Kerala 671316, India; Cell Factory Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon, Republic of Korea
| | - Hee-Sik Kim
- Cell Factory Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon, Republic of Korea.
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Udayan A, Sirohi R, Sreekumar N, Sang BI, Sim SJ. Mass cultivation and harvesting of microalgal biomass: Current trends and future perspectives. BIORESOURCE TECHNOLOGY 2022; 344:126406. [PMID: 34826565 DOI: 10.1016/j.biortech.2021.126406] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/13/2021] [Revised: 11/16/2021] [Accepted: 11/18/2021] [Indexed: 06/13/2023]
Abstract
Microalgae are unicellular photosynthetic organisms capable of producing high-value metabolites like carbohydrates, lipids, proteins, polyunsaturated fatty acids, vitamins, pigments, and other high-value metabolites. Microalgal biomass gained more interest for the production of nutraceuticals, pharmaceuticals, therapeutics, food supplements, feed, biofuel, bio-fertilizers, etc. due to its high lipid and other high-value metabolite content. Microalgal biomass has the potential to convert trapped solar energy to organic materials and potential metabolites of nutraceutical and industrial interest. They have higher efficiency to fix carbon dioxide (CO2) and subsequently convert it into biomass and compounds of potential interest. However, to make microalgae a potential industrial candidate, cost-effective cultivation systems and harvesting methods for increasing biomass yield and reducing the cost of downstream processing have become extremely urgent and important. In this review, the current development in different microalgal cultivation systems and harvesting methods has been discussed.
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Affiliation(s)
- Aswathy Udayan
- Department of Chemical Engineering, Hanyang University, Seoul, South Korea
| | - Ranjna Sirohi
- Department of Chemical and Biological Engineering, Korea University, Seoul South Korea; Centre for Energy and Environmental Sustainability, Lucknow 226 029, Uttar Pradesh, India
| | - Nidhin Sreekumar
- Accubits Invent, Accubits Technologies Inc., Thiruvananthapuram 695 004, Kerala, India
| | - Byoung-In Sang
- Department of Chemical Engineering, Hanyang University, Seoul, South Korea
| | - Sang Jun Sim
- Department of Chemical and Biological Engineering, Korea University, Seoul South Korea.
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Mishra P, Kiran NS, Romanholo Ferreira LF, Mulla SI. Algae bioprocess to deal with cosmetic chemical pollutants in natural ecosystems: A comprehensive review. J Basic Microbiol 2021; 62:1083-1097. [PMID: 34913513 DOI: 10.1002/jobm.202100467] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/01/2021] [Revised: 11/01/2021] [Accepted: 12/03/2021] [Indexed: 01/07/2023]
Abstract
Elevated demand and extensive exploitation of cosmetics in day-to-day life have hiked up its industrial productions worldwide. Organic and inorganic chemicals like parabens, phthalates, sulfates, and so forth are being applied as constituents towards the formulations, which tend to be the mainspring ecological complication due to their enduring nature and accumulation properties in various sections of the ecosystem. These cosmetic chemicals get accrued into the terrestrial and aquatic systems on account of various anthropogenic activities involving agricultural runoff, industrial discharge, and domestic effluents. Recently, the use of microbes for remediating persistent cosmetic chemicals has gained immense interest. Among different forms of the microbial community being applied as an environmental beneficiary, algae play a vital role in both terrestrial and aquatic ecosystems by their biologically beneficial metabolites and molecules, resulting in the biobenign and efficacious consequences. The use of various bacterial, fungal, and higher plant species has been studied intensely for their bioremediation elements. The bioremediating property of the algal cells through biosorption, bioassimilation, biotransformation, and biodegradation has made it favorable for the removal of persistent and toxic pollutants from the environment. However, the research investigation concerned with the bioremediation potential of the algal kingdom is limited. This review summarizes and provides updated and comprehensive insights into the potential remediation capabilities of algal species against ecologically hazardous pollutants concerning cosmetic chemicals.
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Affiliation(s)
- Prabhakar Mishra
- Department of Biotechnology, School of Applied Sciences, REVA University, Bengaluru, Karnataka, India
| | - N S Kiran
- Department of Biotechnology, School of Applied Sciences, REVA University, Bengaluru, Karnataka, India
| | - Luiz Fernando Romanholo Ferreira
- Graduate Program in Process Engineering, Tiradentes University (UNIT), Aracaju, Sergipe, Brazil.,Waste and Effluent Treatment Laboratory, Institute of Technology and Research (ITP), Aracaju, Sergipe, Brazil
| | - Sikandar I Mulla
- Department of Biochemistry, School of Applied Sciences, REVA University, Bengaluru, Karnataka, India
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Hamed I, Jakobsen AN, Lerfall J. Sustainable edible packaging systems based on active compounds from food processing byproducts: A review. Compr Rev Food Sci Food Saf 2021; 21:198-226. [PMID: 34907649 DOI: 10.1111/1541-4337.12870] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/26/2021] [Revised: 10/15/2021] [Accepted: 10/19/2021] [Indexed: 12/25/2022]
Abstract
The global food processing industries represent a challenge and a risk to the environment due to the poor handling of residues, which are often discarded as waste without being used in further sidestreams. Although some part of this biomass is utilized, large quantities are, however, still under- or unutilized despite these byproducts being a rich resource of valuable compounds. These biowastes contain biopolymers and other compounds such as proteins, polysaccharides, lipids, pigments, micronutrients, and minerals with good nutritional values and active biological properties with applications in various fields including the development of sustainable food packaging. This review offers an update on the recent advancement of food byproducts recycling and upgrading toward the production of food packaging materials, which could be edible, (bio)degradable, and act as carriers of biobased active agents such as antimicrobials, antioxidants, flavoring additives, and health-promoting compounds. This should be a global initiative to promote the well-being of humans and achieve sustainability while respecting the ecological boundaries of our planet. Edible films and coatings formulations based on biopolymers and active compounds extracted from biowastes offer great opportunities to decrease the devastating overuse of plastic-based packaging. It has become evident that a transition from a fuel-based to a circular bio-based economy is potentially beneficial. Therefore, the exploitation of food discards within the context of a zero-waste biorefinery approach would improve waste management by minimizing its generation, reduce pollution, and provide value-added compounds. Most importantly, the development of edible packaging materials from food byproducts does not compete with food resources, and it also helps decrease our dependency on petroleum-based products. Practical Application Almost 99% of current plastics are petroleum-based, and their continuous use has been devastating to the planet as plastic-derived components have been detected in all trophic levels. Besides, the increasing amounts of food by-products are a socioeconomic and environmental challenge, and halving food loss and waste and turning it into valuable products has become necessary to achieve sustainability and economic circularity. The development of new packaging systems such as edible materials could be one of the solutions to limit the use of persistent plastics. Edible films and coatings by-products-based could also enhance food packaging performance due to their compounds' bioactivities.
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Affiliation(s)
- Imen Hamed
- Department of Biotechnology and Food Science, NTNU - Norwegian University of Science and Technology, Trondheim, Norway
| | - Anita Nordeng Jakobsen
- Department of Biotechnology and Food Science, NTNU - Norwegian University of Science and Technology, Trondheim, Norway
| | - Jørgen Lerfall
- Department of Biotechnology and Food Science, NTNU - Norwegian University of Science and Technology, Trondheim, Norway
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Sirohi R, Lee JS, Yu BS, Roh H, Sim SJ. Sustainable production of polyhydroxybutyrate from autotrophs using CO 2 as feedstock: Challenges and opportunities. BIORESOURCE TECHNOLOGY 2021; 341:125751. [PMID: 34416655 DOI: 10.1016/j.biortech.2021.125751] [Citation(s) in RCA: 29] [Impact Index Per Article: 9.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/23/2021] [Revised: 08/05/2021] [Accepted: 08/07/2021] [Indexed: 05/05/2023]
Abstract
Due to industrialization and rapid increase in world population, the global energy consumption has increased dramatically. As a consequence, there is increased consumption of fossil fuels, leading to a rapid increase in CO2 concentration in the atmosphere. This accumulated CO2 can be efficiently used by autotrophs as a carbon source to produce chemicals and biopolymers. There has been increasing attention on the production of polyhydroxybutyrate (PHB), a biopolymer, with focus on reducing the production cost. For this, cheaper renewable feedstocks, molecular tools, including metabolic and genetic engineering have been explored to improve microbial strains along with process engineering aspects for scale-up of PHB production. This review discusses the recent advents on the utilization of CO2 as feedstock especially by engineered autotrophs, for sustainable production of PHB. The review also discusses the innovations in cultivation technology and process monitoring while understanding the underlying mechanisms for CO2 to biopolymer conversion.
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Affiliation(s)
- Ranjna Sirohi
- Department of Chemical & Biological Engineering, Korea University, Seoul 136713, Republic of Korea
| | - Jeong Seop Lee
- Department of Chemical & Biological Engineering, Korea University, Seoul 136713, Republic of Korea
| | - Byung Sun Yu
- Department of Chemical & Biological Engineering, Korea University, Seoul 136713, Republic of Korea
| | - Hyejin Roh
- Department of Chemical & Biological Engineering, Korea University, Seoul 136713, Republic of Korea
| | - Sang Jun Sim
- Department of Chemical & Biological Engineering, Korea University, Seoul 136713, Republic of Korea.
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Defrel G, Marsaud N, Rifa E, Martins F, Daboussi F. Identification of Loci Enabling Stable and High-Level Heterologous Gene Expression. Front Bioeng Biotechnol 2021; 9:734902. [PMID: 34660556 PMCID: PMC8517075 DOI: 10.3389/fbioe.2021.734902] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/01/2021] [Accepted: 09/08/2021] [Indexed: 11/17/2022] Open
Abstract
Efficient and reliable genome engineering technologies have yet to be developed for diatoms. The delivery of DNA in diatoms results in the random integration of multiple copies, quite often leading to heterogeneous gene activity, as well as host instability. Transgenic diatoms are generally selected on the basis of transgene expression or high enzyme activity, without consideration of the copy number or the integration locus. Here, we propose an integrated pipeline for the diatom, Phaeodactylum tricornutum, that accurately quantifies transgene activity using a β-glucuronidase assay and the number of transgene copies integrated into the genome through Droplet Digital PCR (ddPCR). An exhaustive and systematic analysis performed on 93 strains indicated that 42% of them exhibited high β-glucuronidase activity. Though most were attributed to high transgene copy numbers, we succeeded in isolating single-copy clones, as well as sequencing the integration loci. In addition to demonstrating the impact of the genomic integration site on gene activity, this study identifies integration sites for stable transgene expression in Phaeodactylum tricornutum.
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Affiliation(s)
- Gilles Defrel
- Toulouse Biotechnology Institute (TBI), Université de Toulouse, CNRS, INRAE, INSA, Toulouse, France
| | - Nathalie Marsaud
- Toulouse Biotechnology Institute (TBI), Plateforme Genome et Transcriptome (GeT-Biopuces) Université de Toulouse, CNRS, INRAE, INSA, Toulouse, France
| | - Etienne Rifa
- Toulouse Biotechnology Institute (TBI), Plateforme Genome et Transcriptome (GeT-Biopuces) Université de Toulouse, CNRS, INRAE, INSA, Toulouse, France
| | - Frédéric Martins
- Institut des Maladies Métaboliques et Cardiovasculaires (I2MC), UMR1297, INSERM, UPS, Toulouse, France
- Plateforme Genome et Transcriptome (GeT), Genopole Toulouse, Toulouse, France
| | - Fayza Daboussi
- Toulouse Biotechnology Institute (TBI), Université de Toulouse, CNRS, INRAE, INSA, Toulouse, France
- Toulouse White Biotechnology (TWB), INSA, Toulouse, France
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Kumar AN, Katakojwala R, Amulya K, Mohan SV. Polyhydroxybutyrate production from dark-fermentative effluent and composite grafting with bagasse derived α-cellulose in a biorefinery approach. CHEMOSPHERE 2021; 279:130563. [PMID: 34134408 DOI: 10.1016/j.chemosphere.2021.130563] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/26/2020] [Revised: 03/20/2021] [Accepted: 04/07/2021] [Indexed: 06/12/2023]
Abstract
The study evaluated the preparation of a biocomposite using waste-derived polyhydroxybutyrate (PHB) and bagasse cellulose (α-cellulose) in a biorefinery approach. PHB was produced using dark fermentation effluent rich in volatile fatty acids (VFA) derived from vegetable waste and α-cellulose was extracted from sugarcane bagasse (SCB). Nutrient limitation induced microbial PHB accumulation, wherein maximum production of 0.28 ± 0.06 g PHB/g DCW (28%) was observed. Confocal examination showed the deposition of PHB granules in the cell cytoplasm and NMR spectrum exhibited a structural correlation. α-Cellulose (0.22 ± 0.02 g α-cellulose/g SCB) was extracted through SCB pretreatment. Thereafter, grafting α-cellulose with PHB offered intermolecular bonding, which resulted in enhanced thermal stability of the biocomposite than corresponding pristine PHB. FE-SEM morphological examination of biocomposite depicted that α-cellulose functioned as a filler to PHB. XRD profiles showed significant decrement in PHB crystallinity, signifying the functional role of α-cellulose as an effective reinforcing agent. Additionally, ether functional group of α-cellulose and ester group of PHB also appeared in XPS analysis of the composite, thus authorizing the effective blending of α-cellulose and PHB. Utilization of bagasse-derived cellulose for strengthening biologically produced PHB expands its applications, while simultaneously addressing the plastic pollution issues. Additional value from this process was further achieved by incorporating the concept of biorefinery, wherein acidogenic fermentation effluents were used for the production of PHA, which enabled the re-entry of products (VFA) to the production cycle, thus achieving circularity.
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Affiliation(s)
- A Naresh Kumar
- Bioengineering and Environmental Sciences Lab, Department of Energy and Environmental Engineering, CSIR-Indian Institute of Chemical Technology (CSIR-IICT), Hyderabad, 500007, India
| | - Ranaprathap Katakojwala
- Bioengineering and Environmental Sciences Lab, Department of Energy and Environmental Engineering, CSIR-Indian Institute of Chemical Technology (CSIR-IICT), Hyderabad, 500007, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, 201002, India
| | - K Amulya
- Bioengineering and Environmental Sciences Lab, Department of Energy and Environmental Engineering, CSIR-Indian Institute of Chemical Technology (CSIR-IICT), Hyderabad, 500007, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, 201002, India
| | - S Venkata Mohan
- Bioengineering and Environmental Sciences Lab, Department of Energy and Environmental Engineering, CSIR-Indian Institute of Chemical Technology (CSIR-IICT), Hyderabad, 500007, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, 201002, India.
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Chong JWR, Yew GY, Khoo KS, Ho SH, Show PL. Recent advances on food waste pretreatment technology via microalgae for source of polyhydroxyalkanoates. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2021; 293:112782. [PMID: 34052610 DOI: 10.1016/j.jenvman.2021.112782] [Citation(s) in RCA: 28] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/16/2021] [Revised: 05/07/2021] [Accepted: 05/12/2021] [Indexed: 06/12/2023]
Abstract
Polyhydroxyalkanoates (PHAs) are biodegradable and biocompatible polyester which are biosynthesized from the intracellular cells of microalgae through the cultivation of organic food waste medium. Before cultivation process, food waste must undergo several pre-treatment techniques such as chemical, biological, physical or mechanical in order to solubilize complex food waste matter into simpler micro- and macronutrients in which allow bio-valorisation of microalgae and food waste compound during the cultivation process. This work reviews four microalgae genera namely Chlamydomonas, Chlorella, Spirulina, and Botryococcus, are selected as suitable species due to rapid growth rate, minimal nutrient requirement, greater adaptability and flexibility prior to lower the overall production cost and maximized the production of PHAs. This study also focuses on the different mode of cultivation for the accumulation of PHAs followed by cell wall destabilization, extraction, and purification. Nonetheless, this review provides future insights into enhancing the productivity of bioplastic derived from microalgae towards low-cost, large-scale, and higher productivity of PHAs.
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Affiliation(s)
- Jun Wei Roy Chong
- State Key Laboratory of Urban Water Resources and Environment, School of Environment, Harbin Institute of Technology, Harbin 150090, P.R. China; Department of Chemical and Environmental Engineering, Faculty of Science and Engineering, University of Nottingham Malaysia, Jalan Broga, 43500, Semenyih, Selangor Darul Ehsan, Malaysia
| | - Guo Yong Yew
- Department of Chemical and Environmental Engineering, Faculty of Science and Engineering, University of Nottingham Malaysia, Jalan Broga, 43500, Semenyih, Selangor Darul Ehsan, Malaysia
| | - Kuan Shiong Khoo
- Department of Chemical and Environmental Engineering, Faculty of Science and Engineering, University of Nottingham Malaysia, Jalan Broga, 43500, Semenyih, Selangor Darul Ehsan, Malaysia
| | - Shih-Hsin Ho
- State Key Laboratory of Urban Water Resources and Environment, School of Environment, Harbin Institute of Technology, Harbin 150090, P.R. China
| | - Pau Loke Show
- Department of Chemical and Environmental Engineering, Faculty of Science and Engineering, University of Nottingham Malaysia, Jalan Broga, 43500, Semenyih, Selangor Darul Ehsan, Malaysia.
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Madadi R, Maljaee H, Serafim LS, Ventura SPM. Microalgae as Contributors to Produce Biopolymers. Mar Drugs 2021; 19:md19080466. [PMID: 34436305 PMCID: PMC8398342 DOI: 10.3390/md19080466] [Citation(s) in RCA: 35] [Impact Index Per Article: 11.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/08/2021] [Revised: 08/09/2021] [Accepted: 08/16/2021] [Indexed: 12/15/2022] Open
Abstract
Biopolymers are very favorable materials produced by living organisms, with interesting properties such as biodegradability, renewability, and biocompatibility. Biopolymers have been recently considered to compete with fossil-based polymeric materials, which rase several environmental concerns. Biobased plastics are receiving growing interest for many applications including electronics, medical devices, food packaging, and energy. Biopolymers can be produced from biological sources such as plants, animals, agricultural wastes, and microbes. Studies suggest that microalgae and cyanobacteria are two of the promising sources of polyhydroxyalkanoates (PHAs), cellulose, carbohydrates (particularly starch), and proteins, as the major components of microalgae (and of certain cyanobacteria) for producing bioplastics. This review aims to summarize the potential of microalgal PHAs, polysaccharides, and proteins for bioplastic production. The findings of this review give insight into current knowledge and future direction in microalgal-based bioplastic production considering a circular economy approach. The current review is divided into three main topics, namely (i) the analysis of the main types and properties of bioplastic monomers, blends, and composites; (ii) the cultivation process to optimize the microalgae growth and accumulation of important biobased compounds to produce bioplastics; and (iii) a critical analysis of the future perspectives on the field.
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Affiliation(s)
- Rozita Madadi
- Department of Agricultural Biotechnology, University College of Agriculture and Natural Resources, University of Tehran, Karaj 77871-31587, Iran;
| | - Hamid Maljaee
- CICECO—Aveiro Institute of Materials, University of Aveiro, Campus Universitário de Santiago, 3810-193 Aveiro, Portugal; (H.M.); (L.S.S.)
| | - Luísa S. Serafim
- CICECO—Aveiro Institute of Materials, University of Aveiro, Campus Universitário de Santiago, 3810-193 Aveiro, Portugal; (H.M.); (L.S.S.)
- Chemistry Department, University of Aveiro, Campus Universitário de Santiago, 3810-193 Aveiro, Portugal
| | - Sónia P. M. Ventura
- CICECO—Aveiro Institute of Materials, University of Aveiro, Campus Universitário de Santiago, 3810-193 Aveiro, Portugal; (H.M.); (L.S.S.)
- Chemistry Department, University of Aveiro, Campus Universitário de Santiago, 3810-193 Aveiro, Portugal
- Correspondence:
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Selvaraj K, Vishvanathan N, Dhandapani R. Screening, optimization and characterization of poly hydroxy butyrate from fresh water microalgal isolates. INTERNATIONAL JOURNAL OF BIOBASED PLASTICS 2021. [DOI: 10.1080/24759651.2021.1926621] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
Affiliation(s)
- Kanaga Selvaraj
- Fermentation Research Laboratory, Department of Microbiology, Periyar University, Salem, India
| | - Nandhini Vishvanathan
- Fermentation Research Laboratory, Department of Microbiology, Periyar University, Salem, India
| | - Ramamurthy Dhandapani
- Fermentation Research Laboratory, Department of Microbiology, Periyar University, Salem, India
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Mishra B, Manmode S, Walke G, Chakraborty S, Neralkar M, Hotha S. Synthesis of the hyper-branched core tetrasaccharide motif of chloroviruses. Org Biomol Chem 2021; 19:1315-1328. [PMID: 33459320 DOI: 10.1039/d0ob02176h] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
Abstract
Chemical synthesis of complex oligosaccharides, especially those possessing hyper-branched structures with one or multiple 1,2-cis glycosidic bonds, is a challenging task. Complementary reactivity of glycosyl donors and acceptors and proper tuning of the solvent/temperature/activator coupled with compromised glycosylation yields for sterically congested glycosyl acceptors are among several factors that make such syntheses daunting. Herein, we report the synthesis of a semi-conserved hyper-branched core tetrasaccharide motif from chloroviruses which are associated with reduced cognitive function in humans as well as in mouse models. The target tetrasaccharide contains four different sugar residues in which l-fucose is connected to d-xylose and l-rhamnose via a 1,2-trans glycosidic bond, whereas with the d-galactose residue is connected through a 1,2-cis glycosidic bond. A thorough and comprehensive study of various accountable factors enabled us to install a 1,2-cis galactopyranosidic linkage in a stereoselective fashion under [Au]/[Ag]-catalyzed glycosidation conditions en route to the target tetrasaccharide motif in 14 steps.
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Affiliation(s)
- Bijoyananda Mishra
- Department of Chemistry, Indian Institute of Science Education and Research, Pune - 411 008, MH, India.
| | - Sujit Manmode
- Department of Chemistry, Indian Institute of Science Education and Research, Pune - 411 008, MH, India.
| | - Gulab Walke
- Department of Chemistry, Indian Institute of Science Education and Research, Pune - 411 008, MH, India.
| | - Saptashwa Chakraborty
- Department of Chemistry, Indian Institute of Science Education and Research, Pune - 411 008, MH, India.
| | - Mahesh Neralkar
- Department of Chemistry, Indian Institute of Science Education and Research, Pune - 411 008, MH, India.
| | - Srinivas Hotha
- Department of Chemistry, Indian Institute of Science Education and Research, Pune - 411 008, MH, India.
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Roh H, Lee JS, Choi HI, Sung YJ, Choi SY, Woo HM, Sim SJ. Improved CO 2-derived polyhydroxybutyrate (PHB) production by engineering fast-growing cyanobacterium Synechococcus elongatus UTEX 2973 for potential utilization of flue gas. BIORESOURCE TECHNOLOGY 2021; 327:124789. [PMID: 33556769 DOI: 10.1016/j.biortech.2021.124789] [Citation(s) in RCA: 26] [Impact Index Per Article: 8.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/09/2020] [Revised: 01/24/2021] [Accepted: 01/26/2021] [Indexed: 06/12/2023]
Abstract
Industrial application of cyanobacterial poly-β-hydroxybutyrate (PHB) production from CO2 is currently challenged by slow growth rate and low photoautotrophic PHB productivity of existing cyanobacteria species. Herein, a novel PHB-producing cyanobacterial strain was developed by harnessing fast-growing cyanobacteria Synechococcus elongatus UTEX 2973 with introduction of heterologous phaCAB genes. Under photoautotrophic condition, the engineered strain produced 420 mg L-1 (16.7% of dry cell weight) with the highest specific productivity of 75.2 mg L-1 d-1. When compared with a native PHB producer Synechocystis PCC 6803 under nitrogen deprivation, the engineered strain exhibited 2.4-fold higher PHB productivity. The performance of the engineered strain was further demonstrated in large scale cultivation using photobioreactor and outdoor cultivation employing industrial flue gas as the sole carbon source. This study can provide a promising solution to address petroleum-based plastic waste and contribute to CO2 mitigation.
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Affiliation(s)
- Hyejin Roh
- Department of Chemical and Biological Engineering, Korea University, 145, Anam-ro, Seongbuk-gu, Seoul 02841, South Korea
| | - Jeong Seop Lee
- Department of Chemical and Biological Engineering, Korea University, 145, Anam-ro, Seongbuk-gu, Seoul 02841, South Korea
| | - Hong Il Choi
- Department of Chemical and Biological Engineering, Korea University, 145, Anam-ro, Seongbuk-gu, Seoul 02841, South Korea
| | - Young Joon Sung
- Department of Chemical and Biological Engineering, Korea University, 145, Anam-ro, Seongbuk-gu, Seoul 02841, South Korea
| | - Sun Young Choi
- SOL inc, 2BK Tower 2F, 28 Beopwon-ro 11-gil, Songpa-gu, Seoul, Seoul 0583, South Korea
| | - Han Min Woo
- Department of Food Science and Biotechnology, Sungkyunkwan University (SKKU), 2066 Seobu-ro, Jangan-gu, Suwon 16419, South Korea; BioFoundry Research Center, Institute of Biotechnology and Bioengineering, Sungkyunkwan University (SKKU), 2066 Seobu-ro, Jangan-gu, Suwon 16419, South Korea
| | - Sang Jun Sim
- Department of Chemical and Biological Engineering, Korea University, 145, Anam-ro, Seongbuk-gu, Seoul 02841, South Korea.
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Rai P, Mehrotra S, Priya S, Gnansounou E, Sharma SK. Recent advances in the sustainable design and applications of biodegradable polymers. BIORESOURCE TECHNOLOGY 2021; 325:124739. [PMID: 33509643 DOI: 10.1016/j.biortech.2021.124739] [Citation(s) in RCA: 124] [Impact Index Per Article: 41.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/26/2020] [Revised: 01/12/2021] [Accepted: 01/14/2021] [Indexed: 06/12/2023]
Abstract
The progression of plastic pollution is a global concern. "Reuse, reduce and recycle" offers a solution to the burdening issue, although not enough to curb the rampant use of plastics. Biodegradable plastics are gaining acceptability in agriculture and food packaging industries; nevertheless, they occupy a rather small section of the plastic market. This review summarizes recent advances in the development of biodegradable plastics and their safe degradation potentials. Here, biodegradable plastics have been categorized and technology and developments in the field of biopolymers, their applicability, degradation and role in sustainable development has been reviewed. Also, the use of natural polymers with improved mechanical and physical properties that brings them at par with their counterparts has been discussed. Biodegradable polymers add value to the industries that would help in achieving sustainable development and consequently reinforce green economy, reducing the burden of greenhouse gases in the environment and valorisation of waste biomass.
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Affiliation(s)
- Pawankumar Rai
- Food, Drug & Chemical Toxicology Group, CSIR-Indian Institute of Toxicology Research, Lucknow 226001, Uttar Pradesh, India
| | - Srishti Mehrotra
- Food, Drug & Chemical Toxicology Group, CSIR-Indian Institute of Toxicology Research, Lucknow 226001, Uttar Pradesh, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad 201002, India
| | - Smriti Priya
- Systems Toxicology & Health Risk Assessment Group, CSIR-Indian Institute of Toxicology Research, Lucknow 226001, Uttar Pradesh, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad 201002, India
| | - Edgard Gnansounou
- Bioenergy and Energy Planning Research Group, Ecole Polytechnique Federale de Lausanne (EFPL), Lausanne, Switzerland
| | - Sandeep K Sharma
- Food, Drug & Chemical Toxicology Group, CSIR-Indian Institute of Toxicology Research, Lucknow 226001, Uttar Pradesh, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad 201002, India.
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Pyrih J, Žárský V, Fellows JD, Grosche C, Wloga D, Striepen B, Maier UG, Tachezy J. The iron-sulfur scaffold protein HCF101 unveils the complexity of organellar evolution in SAR, Haptista and Cryptista. BMC Ecol Evol 2021; 21:46. [PMID: 33740894 PMCID: PMC7980591 DOI: 10.1186/s12862-021-01777-x] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2020] [Accepted: 03/08/2021] [Indexed: 11/22/2022] Open
Abstract
Background Nbp35-like proteins (Nbp35, Cfd1, HCF101, Ind1, and AbpC) are P-loop NTPases that serve as components of iron-sulfur cluster (FeS) assembly machineries. In eukaryotes, Ind1 is present in mitochondria, and its function is associated with the assembly of FeS clusters in subunits of respiratory Complex I, Nbp35 and Cfd1 are the components of the cytosolic FeS assembly (CIA) pathway, and HCF101 is involved in FeS assembly of photosystem I in plastids of plants (chHCF101). The AbpC protein operates in Bacteria and Archaea. To date, the cellular distribution of these proteins is considered to be highly conserved with only a few exceptions. Results We searched for the genes of all members of the Nbp35-like protein family and analyzed their targeting sequences. Nbp35 and Cfd1 were predicted to reside in the cytoplasm with some exceptions of Nbp35 localization to the mitochondria; Ind1was found in the mitochondria, and HCF101 was predicted to reside in plastids (chHCF101) of all photosynthetically active eukaryotes. Surprisingly, we found a second HCF101 paralog in all members of Cryptista, Haptista, and SAR that was predicted to predominantly target mitochondria (mHCF101), whereas Ind1 appeared to be absent in these organisms. We also identified a few exceptions, as apicomplexans possess mHCF101 predicted to localize in the cytosol and Nbp35 in the mitochondria. Our predictions were experimentally confirmed in selected representatives of Apicomplexa (Toxoplasma gondii), Stramenopila (Phaeodactylum tricornutum, Thalassiosira pseudonana), and Ciliophora (Tetrahymena thermophila) by tagging proteins with a transgenic reporter. Phylogenetic analysis suggested that chHCF101 and mHCF101 evolved from a common ancestral HCF101 independently of the Nbp35/Cfd1 and Ind1 proteins. Interestingly, phylogenetic analysis supports rather a lateral gene transfer of ancestral HCF101 from bacteria than its acquisition being associated with either α-proteobacterial or cyanobacterial endosymbionts. Conclusion Our searches for Nbp35-like proteins across eukaryotic lineages revealed that SAR, Haptista, and Cryptista possess mitochondrial HCF101. Because plastid localization of HCF101 was only known thus far, the discovery of its mitochondrial paralog explains confusion regarding the presence of HCF101 in organisms that possibly lost secondary plastids (e.g., ciliates, Cryptosporidium) or possess reduced nonphotosynthetic plastids (apicomplexans). Supplementary Information The online version contains supplementary material available at 10.1186/s12862-021-01777-x.
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Affiliation(s)
- Jan Pyrih
- Department of Parasitology, Faculty of Science, Charles University, BIOCEV, Průmyslová 595, 25250, Vestec, Czech Republic
| | - Vojtěch Žárský
- Department of Parasitology, Faculty of Science, Charles University, BIOCEV, Průmyslová 595, 25250, Vestec, Czech Republic
| | - Justin D Fellows
- Department of Cellular Biology, University of Georgia, Athens, GA, USA
| | - Christopher Grosche
- Laboratory for Cell Biology, Philipps University Marburg, Karl-von-Frisch-Str. 8, 35032, Marburg, Germany.,LOEWE Center for Synthetic Microbiology (Synmikro), Hans-Meerwein-Str. 6, 35032, Marburg, Germany
| | - Dorota Wloga
- Laboratory of Cytoskeleton and Cilia Biology, Nencki Institute of Experimental Biology of Polish Academy of Sciences, 3 Pasteur Street, 02-093, Warsaw, Poland
| | - Boris Striepen
- Department of Cellular Biology, University of Georgia, Athens, GA, USA.,Department of Pathobiology, School of Veterinary Medicine, University of Pennsylvania, 380 South University Avenue, Philadelphia, PA, 19104, USA
| | - Uwe G Maier
- Laboratory for Cell Biology, Philipps University Marburg, Karl-von-Frisch-Str. 8, 35032, Marburg, Germany.,LOEWE Center for Synthetic Microbiology (Synmikro), Hans-Meerwein-Str. 6, 35032, Marburg, Germany
| | - Jan Tachezy
- Department of Parasitology, Faculty of Science, Charles University, BIOCEV, Průmyslová 595, 25250, Vestec, Czech Republic.
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Characterisation of novel regulatory sequences compatible with modular assembly in the diatom Phaeodactylum tricornutum. ALGAL RES 2021. [DOI: 10.1016/j.algal.2020.102159] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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Amadu AA, Qiu S, Ge S, Addico GND, Ameka GK, Yu Z, Xia W, Abbew AW, Shao D, Champagne P, Wang S. A review of biopolymer (Poly-β-hydroxybutyrate) synthesis in microbes cultivated on wastewater. THE SCIENCE OF THE TOTAL ENVIRONMENT 2021; 756:143729. [PMID: 33310224 DOI: 10.1016/j.scitotenv.2020.143729] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/24/2020] [Revised: 11/04/2020] [Accepted: 11/05/2020] [Indexed: 06/12/2023]
Abstract
The large quantities of non-degradable single use plastics, production and disposal, in addition to increasing amounts of municipal and industrial wastewaters are among the major global issues known today. Biodegradable plastics from biopolymers such as Poly-β-hydroxybutyrates (PHB) produced by microorganisms are potential substitutes for non-degradable petroleum-based plastics. This paper reviews the current status of wastewater-cultivated microbes utilized in PHB production, including the various types of wastewaters suitable for either pure or mixed culture PHB production. PHB-producing strains that have the potential for commercialization are also highlighted with proposed selection criteria for choosing the appropriate PHB microbe for optimization of processes. The biosynthetic pathways involved in producing microbial PHB are also discussed to highlight the advancements in genetic engineering techniques. Additionally, the paper outlines the factors influencing PHB production while exploring other metabolic pathways and metabolites simultaneously produced along with PHB in a bio-refinery context. Furthermore, the paper explores the effects of extraction methods on PHB yield and quality to ultimately facilitate the commercial production of biodegradable plastics. This review uniquely discusses the developments in research on microbial biopolymers, specifically PHB and also gives an overview of current commercial PHB companies making strides in cutting down plastic pollution and greenhouse gases.
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Affiliation(s)
- Ayesha Algade Amadu
- Jiangsu Key Laboratory of Chemical Pollution Control and Resources Reuse, School of Environmental and Biological Engineering, Nanjing University of Science and Technology, Xiao Ling Wei 200, Nanjing 210094, PR China
| | - Shuang Qiu
- Jiangsu Key Laboratory of Chemical Pollution Control and Resources Reuse, School of Environmental and Biological Engineering, Nanjing University of Science and Technology, Xiao Ling Wei 200, Nanjing 210094, PR China
| | - Shijian Ge
- Jiangsu Key Laboratory of Chemical Pollution Control and Resources Reuse, School of Environmental and Biological Engineering, Nanjing University of Science and Technology, Xiao Ling Wei 200, Nanjing 210094, PR China.
| | - Gloria Naa Dzama Addico
- Council for Scientific and Industrial Research (CSIR) - Water Research Institute (WRI), P.O. Box AH 38, Achimota Greater Accra, Ghana
| | - Gabriel Komla Ameka
- Department of Botany, University of Ghana, P.O. Box LG55, Legon, Accra, Ghana
| | - Ziwei Yu
- Jiangsu Key Laboratory of Chemical Pollution Control and Resources Reuse, School of Environmental and Biological Engineering, Nanjing University of Science and Technology, Xiao Ling Wei 200, Nanjing 210094, PR China
| | - Wenhao Xia
- Jiangsu Key Laboratory of Chemical Pollution Control and Resources Reuse, School of Environmental and Biological Engineering, Nanjing University of Science and Technology, Xiao Ling Wei 200, Nanjing 210094, PR China
| | - Abdul-Wahab Abbew
- Jiangsu Key Laboratory of Chemical Pollution Control and Resources Reuse, School of Environmental and Biological Engineering, Nanjing University of Science and Technology, Xiao Ling Wei 200, Nanjing 210094, PR China
| | - Dadong Shao
- Jiangsu Key Laboratory of Chemical Pollution Control and Resources Reuse, School of Environmental and Biological Engineering, Nanjing University of Science and Technology, Xiao Ling Wei 200, Nanjing 210094, PR China
| | - Pascale Champagne
- Department of Civil Engineering, Queen's University, Kingston, Ontario K7L 3N6, Canada
| | - Sufeng Wang
- School of Economics and Management, Anhui Jianzhu University, Hefei, Anhui 230601, PR China
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Improvement of Photoautotrophic Algal Biomass Production after Interrupted CO2 Supply by Urea and KH2PO4 Injection. ENERGIES 2021. [DOI: 10.3390/en14030778] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Abstract
Microalgae-derived biomass is currently considered a sustainable feedstock for making biofuels, including biodiesel and direct combustion fuel. The photoautotrophic cultivation of microalgae using flue gas from power plants has been continuously investigated to improve the economic feasibility of microalgae processes. The utilization of waste CO2 from power plants is advantageous in reducing carbon footprints and the cost of carbon sources. Nonetheless, the sudden interruption of CO2 supply during microalgal cultivation leads to a severe reduction in biomass productivity. Herein, chemical fertilizers including urea and KH2PO4 were added to the culture medium when CO2 supply was halted. Urea (5 mM) and KH2PO4 (5 mM) were present in the culture medium in the form of CO2/NH4+ and K+/H2PO4−, respectively, preventing cell growth inhibition. The culture with urea and KH2PO4 supplementation exhibited 10.02-fold higher and 7.28-fold higher biomass and lipid productivity, respectively, compared to the culture with ambient CO2 supply due to the maintenance of a stable pH and dissolved inorganic carbon in the medium. In the mass cultivation of microalgae using flue gas from coal-fired power plants, urea and KH2PO4 were supplied while the flue gas supply was shut off. Consequently, the microalgae were grown successfully without cell death.
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Moog D, Zarzycki J, Rexer KH, Erb TJ, Maier UG. Engineering microalgae as a whole cell catalyst for PET degradation. Methods Enzymol 2021; 648:435-455. [PMID: 33579415 DOI: 10.1016/bs.mie.2020.12.023] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
Abstract
Plastic pollution has become a serious issue on Earth. Although efficient industrial recycling processes exist, a significant fraction of plastic waste still ends up in nature, where it can endure for centuries. Slow mechanical and chemical decay lead to the formation of micro- and nanoplastics, which are washed from land into rivers and finally end up in the oceans. As such particles cannot be efficiently removed from the environment, biological degradation mechanisms are highly desirable. Several enzymes have been described that are capable of degrading certain plastic materials such as polyethylene terephthalate (PET). Such enzymes have a huge potential for future biotechnology applications. However, they require model systems that can be efficiently adapted to very specific conditions. Here, we present detailed instructions, how to convert the model diatom Phaeodactylum into a solar-fueled microbial cell factory for PETase expression, resulting in a whole cell catalyst for PET degradation at moderate temperatures under saltwater conditions.
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Affiliation(s)
- Daniel Moog
- Laboratory for Cell Biology, University of Marburg, Marburg, Germany; SYNMIKRO Research Center, Marburg, Germany.
| | - Jan Zarzycki
- Max Planck Institute for Terrestrial Microbiology, Marburg, Germany
| | - Karl-Heinz Rexer
- Department for Evolutionary Ecology of Plants, University of Marburg, Marburg, Germany
| | - Tobias J Erb
- SYNMIKRO Research Center, Marburg, Germany; Max Planck Institute for Terrestrial Microbiology, Marburg, Germany
| | - Uwe G Maier
- Laboratory for Cell Biology, University of Marburg, Marburg, Germany; SYNMIKRO Research Center, Marburg, Germany
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Mittermair S, Richter J, Doppler P, Trenzinger K, Nicoletti C, Forsich C, Spadiut O, Herwig C, Lackner M. Impact ofexoDgene knockout on the polyhydroxybutyrate overaccumulating mutant Mt_a24. INTERNATIONAL JOURNAL OF BIOBASED PLASTICS 2021. [DOI: 10.1080/24759651.2020.1863020] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
Affiliation(s)
- Sandra Mittermair
- Department of Chemistry and Biology, University of Applied Sciences Upper Austria, AG Biosciences , Wels, Austria
| | - Juliane Richter
- Department of Chemistry and Biology, University of Applied Sciences Upper Austria, AG Biosciences , Wels, Austria
| | - Philipp Doppler
- Institute of Chemical, Environmental and Bioscience Engineering, Research Area Biochemical Engineering, Technische Universität Wien , Vienna, Austria
| | - Kevin Trenzinger
- Department of Chemistry and Biology, University of Applied Sciences Upper Austria, AG Biosciences , Wels, Austria
| | - Cecilia Nicoletti
- Department of Chemistry and Biology, University of Applied Sciences Upper Austria, AG Biosciences , Wels, Austria
| | - Christian Forsich
- Department of Materials Technology, University of Applied Sciences Upper Austria , Wels, Austria
| | - Oliver Spadiut
- Institute of Chemical, Environmental and Bioscience Engineering, Research Area Biochemical Engineering, Technische Universität Wien , Vienna, Austria
| | - Christoph Herwig
- Institute of Chemical, Environmental and Bioscience Engineering, Research Area Biochemical Engineering, Technische Universität Wien , Vienna, Austria
| | - Maximilian Lackner
- Lackner Ventures & Consulting GmbH , Vienna, Austria
- University of Applied Sciences Technikum Wien , Vienna, Austria
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Zhong J, Mori T, Kashiwagi T, Yamashiro M, Kusunose S, Mimami H, Tsujimoto M, Tanaka T, Kawashima H, Nakagawa S, Ito J, Kijima M, Iji M, Watanabe MM, Kadowaki K. Characteristic terahertz absorption spectra of paramylon and paramylon-ester compounds. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2021; 244:118828. [PMID: 32882654 DOI: 10.1016/j.saa.2020.118828] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/06/2020] [Revised: 07/26/2020] [Accepted: 08/08/2020] [Indexed: 06/11/2023]
Abstract
Paramylon is a long-chain polysaccharide, composed of glucose units connected via β-(1,3) glycosidic bonds, that spontaneously forms a three-strand helical bundle. Paramylon-esters can be made by partially or fully replacing saccharide chain hydroxide groups with carboxylic functional groups, such as stearoyl (CH3(CH2)16CO) and palmitoyl (CH3(CH2)24CO). The paramylon-ester with carboxylic acids has superior characteristics, including high thermal resistance, stability and transparency under visible light, which are necessary for thermoplastic applications. In this study, the absorption coefficient α(ν) and absorbance spectra of paramylons and paramylon-esters were measured in the 0.3-8.0 THz range and compared with the corresponding spectra of glucose and cellulose. Paramylon and paramylon-ester molecules were found to exhibit unique, so-called fingerprint, α(ν)peaks at 4.0, 6.0 and 8.0 THz, and 2.5 and 5.0 THz, respectively. We speculate that the spectral features observed are owing to intermolecular interaction modes of the weakly coupled polysaccharide chains. The paramylons with different molecular weights show very similar absorption features in the low-frequency side, both in spectral shapes and intensities, indicating that absorption is independent of molecular size. The paramylon-esters with varying degrees of substitution (DS) are similar spectral shapes but different intensities. A linear correlation between α(ν) peak intensity and the DS of paramylon-esters was established with the R2 value above 0.99. This behavior can be used for the detection and identification of novel paramylon-ester molecules.
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Affiliation(s)
- Junlan Zhong
- Graduate School of Life and Environment Sciences, University of Tsukuba, Tsukuba, Ibaraki, Japan
| | - Tatsuya Mori
- Division of Materials Science, Faculty of Pure & Applied Sciences, University of Tsukuba, Tsukuba, Ibaraki, Japan
| | - Takanari Kashiwagi
- Division of Materials Science, Faculty of Pure & Applied Sciences, University of Tsukuba, Tsukuba, Ibaraki, Japan
| | - Midori Yamashiro
- System Platform Research Laboratories NEC Corporation, 34 Miyukigaoka, Tsukuba, Ibaraki, Japan
| | - Shinji Kusunose
- Graduate School of Pure & Applied Sciences, University of Tsukuba, Ibaraki, Japan
| | - Hidetoshi Mimami
- Division of Materials Science, Faculty of Pure & Applied Sciences, University of Tsukuba, Tsukuba, Ibaraki, Japan
| | - Manabu Tsujimoto
- Division of Materials Science, Faculty of Pure & Applied Sciences, University of Tsukuba, Tsukuba, Ibaraki, Japan
| | - Teruhiko Tanaka
- Division of Materials Science, Faculty of Pure & Applied Sciences, University of Tsukuba, Tsukuba, Ibaraki, Japan
| | - Hidehisa Kawashima
- Division of Materials Science, Faculty of Pure & Applied Sciences, University of Tsukuba, Tsukuba, Ibaraki, Japan
| | - Shin Nakagawa
- Division of Materials Science, Faculty of Pure & Applied Sciences, University of Tsukuba, Tsukuba, Ibaraki, Japan
| | - Junko Ito
- Algae Biomass and Energy System (ABES) Research and Development Center, University of Tsukuba, Tsukuba, Ibaraki, Japan
| | - Masashi Kijima
- Division of Materials Science, Faculty of Pure & Applied Sciences, University of Tsukuba, Tsukuba, Ibaraki, Japan; Algae Biomass and Energy System (ABES) Research and Development Center, University of Tsukuba, Tsukuba, Ibaraki, Japan
| | - Masatoshi Iji
- Algae Biomass and Energy System (ABES) Research and Development Center, University of Tsukuba, Tsukuba, Ibaraki, Japan
| | - Makoto M Watanabe
- Algae Biomass and Energy System (ABES) Research and Development Center, University of Tsukuba, Tsukuba, Ibaraki, Japan
| | - Kazuo Kadowaki
- Division of Materials Science, Faculty of Pure & Applied Sciences, University of Tsukuba, Tsukuba, Ibaraki, Japan; Algae Biomass and Energy System (ABES) Research and Development Center, University of Tsukuba, Tsukuba, Ibaraki, Japan.
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Revalorization of adsorbed residual oil in spent bleaching clay as a sole carbon source for polyhydroxyalkanoate (PHA) accumulation in Cupriavidus necator Re2058/pCB113. Polym J 2020. [DOI: 10.1038/s41428-020-00418-2] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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Chia WY, Ying Tang DY, Khoo KS, Kay Lup AN, Chew KW. Nature's fight against plastic pollution: Algae for plastic biodegradation and bioplastics production. ENVIRONMENTAL SCIENCE AND ECOTECHNOLOGY 2020; 4:100065. [PMID: 36157709 PMCID: PMC9488055 DOI: 10.1016/j.ese.2020.100065] [Citation(s) in RCA: 83] [Impact Index Per Article: 20.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/08/2020] [Revised: 10/30/2020] [Accepted: 10/31/2020] [Indexed: 05/11/2023]
Abstract
The increased global demand for plastic materials has led to severe plastic waste pollution, particularly to the marine environment. This critical issue affects both sea life and human beings since microplastics can enter the food chain and cause several health impacts. Plastic recycling, chemical treatments, incineration and landfill are apparently not the optimum solutions for reducing plastic pollution. Hence, this review presents two newly identified environmentally friendly approaches, plastic biodegradation and bioplastic production using algae, to solve the increased global plastic waste. Algae, particularly microalgae, can degrade the plastic materials through the toxins systems or enzymes synthesized by microalgae itself while using the plastic polymers as carbon sources. Utilizing algae for plastic biodegradation has been critically reviewed in this paper to demonstrate the mechanism and how microplastics affect the algae. On the other hand, algae-derived bioplastics have identical properties and characteristics as petroleum-based plastics, while remarkably being biodegradable in nature. This review provides new insights into different methods of producing algae-based bioplastics (e.g., blending with other materials and genetic engineering), followed by the discussion on the challenges and further research direction to increase their commercial feasibility.
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Affiliation(s)
- Wen Yi Chia
- School of Energy and Chemical Engineering, Xiamen University Malaysia, Selangor Darul Ehsan, 43900, Malaysia
- College of Chemistry and Chemical Engineering, Xiamen University, Xiamen, 361005, Fujian, China
| | - Doris Ying Ying Tang
- Department of Chemical and Environmental Engineering, Faculty of Science and Engineering, University of Nottingham Malaysia, Jalan Broga, 43500, Semenyih, Selangor Darul Ehsan, Malaysia
| | - Kuan Shiong Khoo
- Department of Chemical and Environmental Engineering, Faculty of Science and Engineering, University of Nottingham Malaysia, Jalan Broga, 43500, Semenyih, Selangor Darul Ehsan, Malaysia
| | - Andrew Ng Kay Lup
- School of Energy and Chemical Engineering, Xiamen University Malaysia, Selangor Darul Ehsan, 43900, Malaysia
- College of Chemistry and Chemical Engineering, Xiamen University, Xiamen, 361005, Fujian, China
| | - Kit Wayne Chew
- School of Energy and Chemical Engineering, Xiamen University Malaysia, Selangor Darul Ehsan, 43900, Malaysia
- College of Chemistry and Chemical Engineering, Xiamen University, Xiamen, 361005, Fujian, China
- Corresponding author. School of Energy and Chemical Engineering, Xiamen University Malaysia, Selangor Darul Ehsan, 43900, Malaysia.
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Sethi D, Butler TO, Shuhaili F, Vaidyanathan S. Diatoms for Carbon Sequestration and Bio-Based Manufacturing. BIOLOGY 2020; 9:E217. [PMID: 32785088 PMCID: PMC7464044 DOI: 10.3390/biology9080217] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/24/2020] [Revised: 08/03/2020] [Accepted: 08/05/2020] [Indexed: 12/12/2022]
Abstract
Carbon dioxide (CO2) is a major greenhouse gas responsible for climate change. Diatoms, a natural sink of atmospheric CO2, can be cultivated industrially in autotrophic and mixotrophic modes for the purpose of CO2 sequestration. In addition, the metabolic diversity exhibited by this group of photosynthetic organisms provides avenues to redirect the captured carbon into products of value. These include lipids, omega-3 fatty acids, pigments, antioxidants, exopolysaccharides, sulphated polysaccharides, and other valuable metabolites that can be produced in environmentally sustainable bio-manufacturing processes. To realize the potential of diatoms, expansion of our knowledge of carbon supply, CO2 uptake and fixation by these organisms, in conjunction with ways to enhance metabolic routing of the fixed carbon to products of value is required. In this review, current knowledge is explored, with an evaluation of the potential of diatoms for carbon capture and bio-based manufacturing.
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Affiliation(s)
- Deepak Sethi
- Department of Chemical and Biological Engineering, The University of Sheffield, Sheffield S1 3JD, UK; (F.S.); (S.V.)
| | - Thomas O. Butler
- Department of Chemical and Biological Engineering, The University of Sheffield, Sheffield S1 3JD, UK; (F.S.); (S.V.)
| | - Faqih Shuhaili
- Department of Chemical and Biological Engineering, The University of Sheffield, Sheffield S1 3JD, UK; (F.S.); (S.V.)
- School of Bioprocess Engineering, Universiti Malaysia Perlis (UniMAP), Arau 02600, Perlis, Malaysia
| | - Seetharaman Vaidyanathan
- Department of Chemical and Biological Engineering, The University of Sheffield, Sheffield S1 3JD, UK; (F.S.); (S.V.)
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George J, Kahlke T, Abbriano RM, Kuzhiumparambil U, Ralph PJ, Fabris M. Metabolic Engineering Strategies in Diatoms Reveal Unique Phenotypes and Genetic Configurations With Implications for Algal Genetics and Synthetic Biology. Front Bioeng Biotechnol 2020; 8:513. [PMID: 32582656 PMCID: PMC7290003 DOI: 10.3389/fbioe.2020.00513] [Citation(s) in RCA: 19] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2019] [Accepted: 04/30/2020] [Indexed: 12/23/2022] Open
Abstract
Diatoms are photosynthetic microeukaryotes that dominate phytoplankton populations and have increasing applicability in biotechnology. Uncovering their complex biology and elevating strains to commercial standards depends heavily on robust genetic engineering tools. However, engineering microalgal genomes predominantly relies on random integration of transgenes into nuclear DNA, often resulting in detrimental “position-effects” such as transgene silencing, integration into transcriptionally-inactive regions, and endogenous sequence disruption. With the recent development of extrachromosomal transgene expression via independent episomes, it is timely to investigate both strategies at the phenotypic and genomic level. Here, we engineered the model diatom Phaeodactylum tricornutum to produce the high-value heterologous monoterpenoid geraniol, which, besides applications as fragrance and insect repellent, is a key intermediate of high-value pharmaceuticals. Using high-throughput phenotyping we confirmed the suitability of episomes for synthetic biology applications and identified superior geraniol-yielding strains following random integration. We used third generation long-read sequencing technology to generate a complete analysis of all transgene integration events including their genomic locations and arrangements associated with high-performing strains at a genome-wide scale with subchromosomal detail, never before reported in any microalga. This revealed very large, highly concatenated insertion islands, offering profound implications on diatom functional genetics and next generation genome editing technologies, and is key for developing more precise genome engineering approaches in diatoms, including possible genomic safe harbour locations to support high transgene expression for targeted integration approaches. Furthermore, we have demonstrated that exogenous DNA is not integrated inadvertently into the nuclear genome of extrachromosomal-expression clones, an important characterisation of this novel engineering approach that paves the road to synthetic biology applications.
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Affiliation(s)
- Jestin George
- University of Technology Sydney, Climate Change Cluster, Faculty of Science, Ultimo, NSW, Australia
| | - Tim Kahlke
- University of Technology Sydney, Climate Change Cluster, Faculty of Science, Ultimo, NSW, Australia
| | - Raffaela M Abbriano
- University of Technology Sydney, Climate Change Cluster, Faculty of Science, Ultimo, NSW, Australia
| | | | - Peter J Ralph
- University of Technology Sydney, Climate Change Cluster, Faculty of Science, Ultimo, NSW, Australia
| | - Michele Fabris
- University of Technology Sydney, Climate Change Cluster, Faculty of Science, Ultimo, NSW, Australia.,CSIRO Synthetic Biology Future Science Platform, Brisbane, QLD, Australia
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Bioplastic Production from Microalgae: A Review. INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH 2020; 17:ijerph17113842. [PMID: 32481700 PMCID: PMC7312682 DOI: 10.3390/ijerph17113842] [Citation(s) in RCA: 60] [Impact Index Per Article: 15.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/17/2020] [Revised: 05/22/2020] [Accepted: 05/26/2020] [Indexed: 11/23/2022]
Abstract
Plastic waste production around the world is increasing, which leads to global plastic waste pollution. The need for an innovative solution to reduce this pollution is inevitable. Increased recycling of plastic waste alone is not a comprehensive solution. Furthermore, decreasing fossil-based plastic usage is an important aspect of sustainability. As an alternative to fossil-based plastics in the market, bio-based plastics are gaining in popularity. According to the studies conducted, products with similar performance characteristics can be obtained using biological feedstocks instead of fossil-based sources. In particular, bioplastic production from microalgae is a new opportunity to be explored and further improved. The aim of this study is to determine the current state of bioplastic production technologies from microalgae species and reveal possible optimization opportunities in the process and application areas. Therefore, the species used as resources for bioplastic production, the microalgae cultivation methods and bioplastic material production methods from microalgae were summarized.
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Nematollahi MA, Laird DW, Hughes LJ, Raeisossadati M, Moheimani NR. Effect of organic carbon source and nutrient depletion on the simultaneous production of a high value bioplastic and a specialty pigment by Arthrospira platensis. ALGAL RES 2020. [DOI: 10.1016/j.algal.2020.101844] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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A review of high value-added molecules production by microalgae in light of the classification. Biotechnol Adv 2020; 41:107545. [PMID: 32272160 DOI: 10.1016/j.biotechadv.2020.107545] [Citation(s) in RCA: 157] [Impact Index Per Article: 39.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/09/2020] [Revised: 03/06/2020] [Accepted: 03/27/2020] [Indexed: 12/17/2022]
Abstract
This work reviews applications of high added value molecules produced from microalgae. Older forms of valorization - health food and quality feed, polyunsaturated fatty acids, pigments, carbohydrates - are currently penetrating their markets. They are driven by desirable properties: texturer and dye for food industry, antioxidant for cosmetics and the appetite of the general public for biosourced compounds. Most recent developments, such as peptides, vitamins, polyphenols, phytosterols and phytohormones, are struggling to meet their market and reach economical competitiveness. Still they are pushed forward by the very powerful driver that is pharmaceutical industry. In addition this work also proposes to link microalgae phyla and related potential applications. This is done through highlighting of which bioactive compounds can be found in which phyla. While some seem to be restricted to aquaculture, Cyanobacteria, Chlorophyta and Rhodophyta show great promises.
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