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Voothuluru P, Wu Y, Sharp RE. Not so hidden anymore: Advances and challenges in understanding root growth under water deficits. THE PLANT CELL 2024; 36:1377-1409. [PMID: 38382086 PMCID: PMC11062450 DOI: 10.1093/plcell/koae055] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/14/2023] [Revised: 02/09/2024] [Accepted: 02/15/2024] [Indexed: 02/23/2024]
Abstract
Limited water availability is a major environmental factor constraining plant development and crop yields. One of the prominent adaptations of plants to water deficits is the maintenance of root growth that enables sustained access to soil water. Despite early recognition of the adaptive significance of root growth maintenance under water deficits, progress in understanding has been hampered by the inherent complexity of root systems and their interactions with the soil environment. We highlight selected milestones in the understanding of root growth responses to water deficits, with emphasis on founding studies that have shaped current knowledge and set the stage for further investigation. We revisit the concept of integrated biophysical and metabolic regulation of plant growth and use this framework to review central growth-regulatory processes occurring within root growth zones under water stress at subcellular to organ scales. Key topics include the primary processes of modifications of cell wall-yielding properties and osmotic adjustment, as well as regulatory roles of abscisic acid and its interactions with other hormones. We include consideration of long-recognized responses for which detailed mechanistic understanding has been elusive until recently, for example hydrotropism, and identify gaps in knowledge, ongoing challenges, and opportunities for future research.
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Affiliation(s)
- Priya Voothuluru
- Division of Plant Science and Technology, University of Missouri, Columbia, MO 65211, USA
- Interdisciplinary Plant Group, University of Missouri, Columbia, MO 65211, USA
| | - Yajun Wu
- Department of Biology and Microbiology, South Dakota State University, Brookings, SD 57007, USA
| | - Robert E Sharp
- Division of Plant Science and Technology, University of Missouri, Columbia, MO 65211, USA
- Interdisciplinary Plant Group, University of Missouri, Columbia, MO 65211, USA
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Petrova A, Ageeva M, Kozlova L. Root growth of monocotyledons and dicotyledons is limited by different tissues. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2023; 116:1462-1476. [PMID: 37646760 DOI: 10.1111/tpj.16440] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/15/2023] [Accepted: 08/16/2023] [Indexed: 09/01/2023]
Abstract
Plant growth and morphogenesis are determined by the mechanical properties of its cell walls. Using atomic force microscopy, we have characterized the dynamics of cell wall elasticity in different tissues in developing roots of several plant species. The elongation growth zone of roots of all species studied was distinguished by a reduced modulus of elasticity of most cell walls compared to the meristem or late elongation zone. Within the individual developmental zones of roots, there were also significant differences in the elasticity of the cell walls of the different tissues, thus identifying the tissues that limit root growth in the different species. In cereals, this is mainly the inner cortex, whereas in dicotyledons this function is performed by the outer tissues-rhizodermis and cortex. These differences result in a different behaviour of the roots of these species during longitudinal dissection. Modelling of longitudinal root dissection using measured properties confirmed the difference shown. Thus, the morphogenesis of monocotyledonous and dicotyledonous roots relies on different tissues as growth limiting, which should be taken into account when analyzing the localization of associated molecular events. At the same time, no matrix polysaccharide was found whose immunolabelling in type I or type II cell walls would predict their mechanical properties. However, assessment of the degree of anisotropy of cortical microtubules showed a striking correlation with the elasticity of the corresponding cell walls in all species studied.
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Affiliation(s)
- Anna Petrova
- Laboratory of Plant Cell Growth Mechanisms, Kazan Institute of Biochemistry and Biophysics, FRC Kazan Scientific Center of RAS, Lobachevsky Str., 2/31, 420111, Kazan, Russia
| | - Marina Ageeva
- Microscopy Cabinet, Kazan Institute of Biochemistry and Biophysics, FRC Kazan Scientific Center of RAS, Lobachevsky Str., 2/31, 420111, Kazan, Russia
| | - Liudmila Kozlova
- Laboratory of Plant Cell Growth Mechanisms, Kazan Institute of Biochemistry and Biophysics, FRC Kazan Scientific Center of RAS, Lobachevsky Str., 2/31, 420111, Kazan, Russia
- Mechanics and Civil Engineering Laboratory, University of Montpellier, 860 Rue de St - Priest, 34090, Montpellier, France
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Kaur H, Teulon JM, Foucher AE, Fenel D, Chen SWW, Godon C, Desnos T, Pellequer JL. Measuring external primary cell wall elasticity of seedling roots using atomic force microscopy. STAR Protoc 2023; 4:102265. [PMID: 37200196 DOI: 10.1016/j.xpro.2023.102265] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/07/2023] [Revised: 03/13/2023] [Accepted: 03/31/2023] [Indexed: 05/20/2023] Open
Abstract
Stiffness plays a central action in plant cell extension. Here, we present a protocol to detect changes in stiffness on the external epidermal cell wall of living plant roots using atomic force microscopy (AFM). We provide generalized instructions for collecting force-distance curves and analysis of stiffness using contact-based mechanical model. With this protocol, and some initial training in AFM, a user is able to perform indentation experiments on 4- and 5-day-old Arabidopsis thaliana and determine stiffness properties. For complete details on the use and execution of this protocol, please refer to Godon et al.1.
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Affiliation(s)
| | | | | | - Daphna Fenel
- Univ. Grenoble Alpes, CEA, CNRS, IBS, 38000 Grenoble, France
| | - Shu-Wen W Chen
- Univ. Grenoble Alpes, CEA, CNRS, IBS, 38000 Grenoble, France; Rue Cyprien Jullin, 38470 Vinay, France
| | - Christian Godon
- Aix Marseille Université, CNRS, CEA, Institut de Biosciences et Biotechnologies Aix-Marseille, CEA Cadarache, 13115 Saint-Paul lez-Durance, France
| | - Thierry Desnos
- Aix Marseille Université, CNRS, CEA, Institut de Biosciences et Biotechnologies Aix-Marseille, Equipe Bioénergies et Microalgues, CEA Cadarache, 13115 Saint-Paul-lez-Durance, France.
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Kikuchi S, Sakamoto T, Matsunaga S, Iwamoto A. Novel whole-mount FISH analysis for intact root of Arabidopsis thaliana with spatial reference to 3D visualization. JOURNAL OF PLANT RESEARCH 2023; 136:423-428. [PMID: 36719512 DOI: 10.1007/s10265-023-01438-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/05/2022] [Accepted: 01/22/2023] [Indexed: 06/18/2023]
Abstract
Whole-mount fluorescent in situ hybridization (WM-FISH) is an effective tool to observe chromosome behavior in tissues or organs. However, it is difficult to obtain a precise spatial profile of fluorescent signals in roots using conventional WM-FISH mainly because of the severe damage caused during the processing. To address this problem, we established a novel WM-FISH analysis for intact roots of Arabidopsis thaliana and successfully obtained a precise spatial profile of nuclear size and centromere signals. The two main improvements in the novel WM-FISH analysis are: (i) hybridization was performed directly on MAS-coated glass slides covered with silicon wells and (ii) conditions for enzyme treatment were optimized (37 °C, 45 s). After the WM-FISH using a centromere probe, we analyzed the results by 3D data processing to quantify the nuclear volume and number of centromere signals of the obtained cortical cell files and determined the position of each nucleus in intact roots. Then we plotted the nuclear volume and number of centromere signals versus distance from the quiescent center to evaluate the precise spatial profile of each parameter.
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Affiliation(s)
- Suzuka Kikuchi
- Department of Biological Sciences, Graduate School of Science, Kanagawa University, 2946, 259-1293, Tsuchiya, Hiratsuka, Kanagawa, Japan.
| | - Takuya Sakamoto
- Department of Applied Biological Science, Faculty of Science and Technology, Tokyo University of Science, 2641 Yamazaki, 278-8510, Noda, Chiba, Japan
| | - Sachihiro Matsunaga
- Department of Integrated Biosciences, Graduate School of Frontier Sciences, University of Tokyo, 5-1-5 Kashiwanoha, 277-8561, Kashiwa, Chiba, Japan
| | - Akitoshi Iwamoto
- Department of Biological Sciences, Graduate School of Science, Kanagawa University, 2946, 259-1293, Tsuchiya, Hiratsuka, Kanagawa, Japan
- Department of Biological Science, Faculty of Science, Kanagawa University, 2946, 259-1293, Tsuchiya, Hiratsuka, Kanagawa, Japan
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Petrova A, Gorshkova T, Kozlova L. Gradients of cell wall nano-mechanical properties along and across elongating primary roots of maize. JOURNAL OF EXPERIMENTAL BOTANY 2021; 72:1764-1781. [PMID: 33247728 DOI: 10.1093/jxb/eraa561] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/19/2020] [Accepted: 11/23/2020] [Indexed: 06/12/2023]
Abstract
To test the hypothesis that particular tissues can control root growth, we analysed the mechanical properties of cell walls belonging to different tissues of the apical part of the maize root using atomic force microscopy. The dynamics of properties during elongation growth were characterized in four consecutive zones of the root. Extensive immunochemical characterization and quantification were used to establish the polysaccharide motif(s) related to changes in cell wall mechanics. Cell transition from division to elongation was coupled to the decrease in the elastic modulus in all root tissues. Low values of moduli were retained in the elongation zone and increased in the late elongation zone. No relationship between the immunolabelling pattern and mechanical properties of the cell walls was revealed. When measured values of elastic moduli and turgor pressure were used in the computational simulation, this resulted in an elastic response of the modelled root and the distribution of stress and strain similar to those observed in vivo. In all analysed root zones, cell walls of the inner cortex displayed moduli of elasticity that were maximal or comparable with the maximal values among all tissues. Thus, we propose that the inner cortex serves as a growth-limiting tissue in maize roots.
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Affiliation(s)
- Anna Petrova
- Kazan Institute of Biochemistry and Biophysics, FRC Kazan Scientific Center of RAS, Kazan, Russia
| | - Tatyana Gorshkova
- Kazan Institute of Biochemistry and Biophysics, FRC Kazan Scientific Center of RAS, Kazan, Russia
| | - Liudmila Kozlova
- Kazan Institute of Biochemistry and Biophysics, FRC Kazan Scientific Center of RAS, Kazan, Russia
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ROBINSON SARAH, DURAND‐SMET PAULINE. Combining tensile testing and microscopy to address a diverse range of questions. J Microsc 2020; 278:145-153. [DOI: 10.1111/jmi.12863] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2019] [Revised: 12/20/2019] [Accepted: 01/08/2020] [Indexed: 12/23/2022]
Affiliation(s)
- SARAH ROBINSON
- The Sainsbury Laboratory Cambridge University Bateman Street Cambridge UK
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