1
|
Eriksson JS, Bacon CD, Bennett DJ, Pfeil BE, Oxelman B, Antonelli A. Gene count from target sequence capture places three whole genome duplication events in Hibiscus L. (Malvaceae). BMC Ecol Evol 2021; 21:107. [PMID: 34078291 PMCID: PMC8170824 DOI: 10.1186/s12862-021-01751-7] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/22/2020] [Accepted: 01/27/2021] [Indexed: 11/24/2022] Open
Abstract
Background The great diversity in plant genome size and chromosome number is partly due to polyploidization (i.e. genome doubling events). The differences in genome size and chromosome number among diploid plant species can be a window into the intriguing phenomenon of past genome doubling that may be obscured through time by the process of diploidization. The genus Hibiscus L. (Malvaceae) has a wide diversity of chromosome numbers and a complex genomic history. Hibiscus is ideal for exploring past genomic events because although two ancient genome duplication events have been identified, more are likely to be found due to its diversity of chromosome numbers. To reappraise the history of whole-genome duplication events in Hibiscus, we tested three alternative scenarios describing different polyploidization events. Results Using target sequence capture, we designed a new probe set for Hibiscus and generated 87 orthologous genes from four diploid species. We detected paralogues in > 54% putative single-copy genes. 34 of these genes were selected for testing three different genome duplication scenarios using gene counting. All species of Hibiscus sampled shared one genome duplication with H. syriacus, and one whole genome duplication occurred along the branch leading to H. syriacus. Conclusions Here, we corroborated the independent genome doubling previously found in the lineage leading to H. syriacus and a shared genome doubling of this lineage and the remainder of Hibiscus. Additionally, we found a previously undiscovered genome duplication shared by the /Pavonia and /Malvaviscus clades (both nested within Hibiscus) with the occurrences of two copies in what were otherwise single-copy genes. Our results highlight the complexity of genomic diversity in some plant groups, which makes orthology assessment and accurate phylogenomic inference difficult.
Collapse
Affiliation(s)
- J S Eriksson
- School of Bioscience, Systems Biology Research Center, 541 45, Skövde, Sweden. .,Gothenburg Global Biodiversity Centre, Box 461, 405 30, Gothenburg, Sweden.
| | - C D Bacon
- Department of Biological and Environmental Sciences, University of Gothenburg, Box 461, 405 30, Gothenburg, Sweden.,Gothenburg Global Biodiversity Centre, Box 461, 405 30, Gothenburg, Sweden
| | - D J Bennett
- Department of Biological and Environmental Sciences, University of Gothenburg, Box 461, 405 30, Gothenburg, Sweden.,Gothenburg Global Biodiversity Centre, Box 461, 405 30, Gothenburg, Sweden
| | - B E Pfeil
- Department of Biological and Environmental Sciences, University of Gothenburg, Box 461, 405 30, Gothenburg, Sweden.,Gothenburg Global Biodiversity Centre, Box 461, 405 30, Gothenburg, Sweden
| | - B Oxelman
- Department of Biological and Environmental Sciences, University of Gothenburg, Box 461, 405 30, Gothenburg, Sweden.,Gothenburg Global Biodiversity Centre, Box 461, 405 30, Gothenburg, Sweden
| | - A Antonelli
- Department of Biological and Environmental Sciences, University of Gothenburg, Box 461, 405 30, Gothenburg, Sweden.,Gothenburg Global Biodiversity Centre, Box 461, 405 30, Gothenburg, Sweden.,Royal Botanic Gardens, Kew, Richmond, Surrey, TW9 3AE, UK.,Department of Plant Sciences, University of Oxford, South Parks Road, Oxford, OX1 3 RB, UK
| |
Collapse
|
2
|
Carter Y, Bennett DJ, Molla V, Wink AE, Collins AJ, Giannaris EL. A case of distal limb arterial tortuosity and dilation: observations and potential clinical significance. Folia Morphol (Warsz) 2021; 81:791-797. [PMID: 34060644 DOI: 10.5603/fm.a2021.0055] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/29/2021] [Revised: 03/30/2021] [Accepted: 04/22/2021] [Indexed: 11/25/2022]
Abstract
Arterial tortuosity describes variation via bending of the arterial wall and has been noted in several arteries throughout the body. Tortuous blood vessels can cause nerve compression, as well as present difficulties to surgeons and radiologists. Here we present an unusual case of multi-vessel arterial tortuosity discovered in 78-year-old Hispanic male cadaver, independent of systemic pathology. The left ulnar and right tibial arteries were dissected, and using calibrated digital calipers, their external and internal diameters were measured both at the origin site and at the site of greatest dilation. Both wall thickness and the number of inflection points were also measured. Six bends were noticed in the ulnar artery and its diameter measured 8.11 mm at its widest, with a wall thickness of 0.88mm. On the lower extremity, the right tibial artery had three bends and its diameter measured 4.86 mm at its widest, with a wall thickness of 1.32 mm. This uncommon tortuosity is not only more prone to laceration during surgery, but the bending and thickening can be mistaken for tumors. Finally, fluid dynamics can be altered, resulting in an impact on blood pressure in the extremities. Thus, raising awareness is crucial to prevent both symptoms and iatrogenic complications.
Collapse
Affiliation(s)
- Y Carter
- Division of Translational Anatomy, Department of Radiology, University of Massachusetts Medical School, Worcester, MA, United States of America.
| | - D J Bennett
- Undergraduate Medical Education, University of Massachusetts Medical School, Worcester, MA, United States of America
| | - V Molla
- Undergraduate Medical Education, University of Massachusetts Medical School, Worcester, MA, United States of America
| | - A E Wink
- Division of Translational Anatomy, Department of Radiology, University of Massachusetts Medical School, Worcester, MA, United States of America
| | - A J Collins
- Division of Translational Anatomy, Department of Radiology, University of Massachusetts Medical School, Worcester, MA, United States of America
| | - E L Giannaris
- Division of Translational Anatomy, Department of Radiology, University of Massachusetts Medical School, Worcester, MA, United States of America
| |
Collapse
|
3
|
Ritter CD, Faurby S, Bennett DJ, Naka LN, Ter Steege H, Zizka A, Haenel Q, Nilsson RH, Antonelli A. The pitfalls of biodiversity proxies: Differences in richness patterns of birds, trees and understudied diversity across Amazonia. Sci Rep 2019; 9:19205. [PMID: 31844092 PMCID: PMC6915760 DOI: 10.1038/s41598-019-55490-3] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/27/2019] [Accepted: 11/25/2019] [Indexed: 01/09/2023] Open
Abstract
Most knowledge on biodiversity derives from the study of charismatic macro-organisms, such as birds and trees. However, the diversity of micro-organisms constitutes the majority of all life forms on Earth. Here, we ask if the patterns of richness inferred for macro-organisms are similar for micro-organisms. For this, we barcoded samples of soil, litter and insects from four localities on a west-to-east transect across Amazonia. We quantified richness as Operational Taxonomic Units (OTUs) in those samples using three molecular markers. We then compared OTU richness with species richness of two relatively well-studied organism groups in Amazonia: trees and birds. We find that OTU richness shows a declining west-to-east diversity gradient that is in agreement with the species richness patterns documented here and previously for birds and trees. These results suggest that most taxonomic groups respond to the same overall diversity gradients at large spatial scales. However, our results show a different pattern of richness in relation to habitat types, suggesting that the idiosyncrasies of each taxonomic group and peculiarities of the local environment frequently override large-scale diversity gradients. Our findings caution against using the diversity distribution of one taxonomic group as an indication of patterns of richness across all groups.
Collapse
Affiliation(s)
- Camila D Ritter
- Department of Eukaryotic Microbiology, University of Duisburg-Essen, Universitätsstrasse 5 S05 R04 H83, D-45141, Essen, Germany. .,Gothenburg Global Biodiversity Centre, Box 461, SE-405 30, Göteborg, Sweden. .,Department of Biological and Environmental Sciences, University of Gothenburg, Box 463, SE-405 30, Göteborg, Sweden.
| | - Søren Faurby
- Gothenburg Global Biodiversity Centre, Box 461, SE-405 30, Göteborg, Sweden.,Department of Biological and Environmental Sciences, University of Gothenburg, Box 463, SE-405 30, Göteborg, Sweden
| | - Dominic J Bennett
- Gothenburg Global Biodiversity Centre, Box 461, SE-405 30, Göteborg, Sweden.,Department of Biological and Environmental Sciences, University of Gothenburg, Box 463, SE-405 30, Göteborg, Sweden
| | - Luciano N Naka
- Laboratório de Ornitologia, Departamento de Zoologia, Universidade Federal de Pernambuco, Recife, PE, Brazil
| | - Hans Ter Steege
- Naturalis Biodiversity Center, Leiden, Netherlands.,Systems Ecology, Free University, Amsterdam, Netherlands
| | - Alexander Zizka
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Deutscher Platz 5e, 04103, Leipzig, Germany
| | - Quiterie Haenel
- Zoological Institute, University of Basel, Vesalgasse 1, CH-4051, Basel, Switzerland
| | - R Henrik Nilsson
- Gothenburg Global Biodiversity Centre, Box 461, SE-405 30, Göteborg, Sweden.,Department of Biological and Environmental Sciences, University of Gothenburg, Box 463, SE-405 30, Göteborg, Sweden
| | - Alexandre Antonelli
- Gothenburg Global Biodiversity Centre, Box 461, SE-405 30, Göteborg, Sweden.,Department of Biological and Environmental Sciences, University of Gothenburg, Box 463, SE-405 30, Göteborg, Sweden.,Royal Botanic Gardens, Kew, TW9 3AE, Richmond, Surrey, UK
| |
Collapse
|
4
|
Bennett DJ, Sutton MD, Turvey ST. How the past impacts the future: modelling the performance of evolutionarily distinct mammals through time. Philos Trans R Soc Lond B Biol Sci 2019; 374:20190210. [PMID: 31679492 DOI: 10.1098/rstb.2019.0210] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
How does past evolutionary performance impact future evolutionary performance? This is an important question not just for macroevolutionary biologists who wish to chart the phenomena that describe deep-time changes in biodiversity but also for conservation biologists, as evolutionarily distinct species-which may be deemed 'low-performing' in our current era-are increasingly the focus of conservation efforts. Contrasting hypotheses exist to account for the history and future of evolutionarily distinct species: on the one hand, they may be relicts of large radiations, potentially 'doomed' to extinction; or they may be slow-evolving, 'living fossils', likely neither to speciate nor go extinct; or they may be seeds of future radiations. Here, we attempt to test these hypotheses in Mammalia by combining a molecular phylogenetic supertree with fossil record occurrences and measuring change in evolutionary distinctness (ED) at different time slices. With these time slices, we modelled future ED as a function of past ED. We find that past evolutionary performance does indeed have an impact on future evolutionary performance: the most evolutionarily isolated clades tend to become more evolutionarily distinct with time, indicating that low-performing clades tend to remain low-performing throughout their evolutionary history. This article is part of a discussion meeting issue 'The past is a foreign country: how much can the fossil record actually inform conservation?'
Collapse
Affiliation(s)
- D J Bennett
- Gothenburg Global Biodiversity Centre, PO Box 461, 405 30 Gothenburg, Sweden.,Department of Biological and Environmental Sciences, University of Gothenburg, PO Box 461, 405 30 Gothenburg, Sweden
| | - M D Sutton
- Department of Earth Sciences and Engineering, Imperial College London, London SW7 2BP, UK
| | - S T Turvey
- Institute of Zoology, Zoological Society of London, London NW1 4RY, UK
| |
Collapse
|
5
|
Bennett DJ, Hettling H, Silvestro D, Zizka A, Bacon CD, Faurby S, Vos RA, Antonelli A. phylotaR: An Automated Pipeline for Retrieving Orthologous DNA Sequences from GenBank in R. Life (Basel) 2018; 8:life8020020. [PMID: 29874797 PMCID: PMC6027284 DOI: 10.3390/life8020020] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/28/2018] [Revised: 05/26/2018] [Accepted: 06/01/2018] [Indexed: 12/04/2022] Open
Abstract
The exceptional increase in molecular DNA sequence data in open repositories is mirrored by an ever-growing interest among evolutionary biologists to harvest and use those data for phylogenetic inference. Many quality issues, however, are known and the sheer amount and complexity of data available can pose considerable barriers to their usefulness. A key issue in this domain is the high frequency of sequence mislabeling encountered when searching for suitable sequences for phylogenetic analysis. These issues include, among others, the incorrect identification of sequenced species, non-standardized and ambiguous sequence annotation, and the inadvertent addition of paralogous sequences by users. Taken together, these issues likely add considerable noise, error or bias to phylogenetic inference, a risk that is likely to increase with the size of phylogenies or the molecular datasets used to generate them. Here we present a software package, phylotaR that bypasses the above issues by using instead an alignment search tool to identify orthologous sequences. Our package builds on the framework of its predecessor, PhyLoTa, by providing a modular pipeline for identifying overlapping sequence clusters using up-to-date GenBank data and providing new features, improvements and tools. We demonstrate and test our pipeline’s effectiveness by presenting trees generated from phylotaR clusters for two large taxonomic clades: Palms and primates. Given the versatility of this package, we hope that it will become a standard tool for any research aiming to use GenBank data for phylogenetic analysis.
Collapse
Affiliation(s)
- Dominic J Bennett
- Gothenburg Global Biodiversity Centre, Box 461, SE-405 30 Gothenburg, Sweden.
- Department of Biological and Environmental Sciences, University of Gothenburg, Box 461, SE-405 30 Gothenburg, Sweden.
| | - Hannes Hettling
- Naturalis Biodiversity Center, P.O. Box 9517, 2300 RA Leiden, The Netherlands.
| | - Daniele Silvestro
- Gothenburg Global Biodiversity Centre, Box 461, SE-405 30 Gothenburg, Sweden.
- Department of Biological and Environmental Sciences, University of Gothenburg, Box 461, SE-405 30 Gothenburg, Sweden.
| | - Alexander Zizka
- Gothenburg Global Biodiversity Centre, Box 461, SE-405 30 Gothenburg, Sweden.
- Department of Biological and Environmental Sciences, University of Gothenburg, Box 461, SE-405 30 Gothenburg, Sweden.
| | - Christine D Bacon
- Gothenburg Global Biodiversity Centre, Box 461, SE-405 30 Gothenburg, Sweden.
- Department of Biological and Environmental Sciences, University of Gothenburg, Box 461, SE-405 30 Gothenburg, Sweden.
| | - Søren Faurby
- Gothenburg Global Biodiversity Centre, Box 461, SE-405 30 Gothenburg, Sweden.
- Department of Biological and Environmental Sciences, University of Gothenburg, Box 461, SE-405 30 Gothenburg, Sweden.
| | - Rutger A Vos
- Naturalis Biodiversity Center, P.O. Box 9517, 2300 RA Leiden, The Netherlands.
| | - Alexandre Antonelli
- Gothenburg Global Biodiversity Centre, Box 461, SE-405 30 Gothenburg, Sweden.
- Department of Biological and Environmental Sciences, University of Gothenburg, Box 461, SE-405 30 Gothenburg, Sweden.
- Gothenburg Botanical Garden, Carl Skottsbergsgata 22A, SE-413 19 Gothenburg, Sweden.
- Department of Organismic and Evolutionary Biology, Harvard University, 26 Oxford St., Cambridge, MA 02138 USA.
| |
Collapse
|
6
|
Eiserhardt WL, Antonelli A, Bennett DJ, Botigué LR, Burleigh JG, Dodsworth S, Enquist BJ, Forest F, Kim JT, Kozlov AM, Leitch IJ, Maitner BS, Mirarab S, Piel WH, Pérez-Escobar OA, Pokorny L, Rahbek C, Sandel B, Smith SA, Stamatakis A, Vos RA, Warnow T, Baker WJ. A roadmap for global synthesis of the plant tree of life. Am J Bot 2018; 105:614-622. [PMID: 29603138 DOI: 10.1002/ajb2.1041] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/13/2017] [Accepted: 11/08/2017] [Indexed: 06/08/2023]
Abstract
Providing science and society with an integrated, up-to-date, high quality, open, reproducible and sustainable plant tree of life would be a huge service that is now coming within reach. However, synthesizing the growing body of DNA sequence data in the public domain and disseminating the trees to a diverse audience are often not straightforward due to numerous informatics barriers. While big synthetic plant phylogenies are being built, they remain static and become quickly outdated as new data are published and tree-building methods improve. Moreover, the body of existing phylogenetic evidence is hard to navigate and access for non-experts. We propose that our community of botanists, tree builders, and informaticians should converge on a modular framework for data integration and phylogenetic analysis, allowing easy collaboration, updating, data sourcing and flexible analyses. With support from major institutions, this pipeline should be re-run at regular intervals, storing trees and their metadata long-term. Providing the trees to a diverse global audience through user-friendly front ends and application development interfaces should also be a priority. Interactive interfaces could be used to solicit user feedback and thus improve data quality and to coordinate the generation of new data. We conclude by outlining a number of steps that we suggest the scientific community should take to achieve global phylogenetic synthesis.
Collapse
Affiliation(s)
- Wolf L Eiserhardt
- Royal Botanic Gardens, Kew, TW9 3AE, Richmond, Surrey, UK
- Department of Bioscience, Aarhus University, Ny Munkegade 116, 8000, Aarhus C, Denmark
| | - Alexandre Antonelli
- Gothenburg Global Biodiversity Centre, Box 461, 405 30, Gothenburg, Sweden
- Department of Biological and Environmental Sciences, University of Gothenburg, Box 461, 405 30, Gothenburg, Sweden
- Gothenburg Botanical Garden, Carl Skottsbergs Gata 22B, SE-413 19, Gothenburg, Sweden
| | - Dominic J Bennett
- Gothenburg Global Biodiversity Centre, Box 461, 405 30, Gothenburg, Sweden
- Department of Biological and Environmental Sciences, University of Gothenburg, Box 461, 405 30, Gothenburg, Sweden
- Gothenburg Botanical Garden, Carl Skottsbergs Gata 22B, SE-413 19, Gothenburg, Sweden
| | | | | | | | - Brian J Enquist
- Department of Ecology and Evolutionary Biology, University of Arizona, Tucson, AZ, 85721, USA
- The Santa Fe Institute, Santa Fe, NM, 87501, USA
| | - Félix Forest
- Royal Botanic Gardens, Kew, TW9 3AE, Richmond, Surrey, UK
| | - Jan T Kim
- Royal Botanic Gardens, Kew, TW9 3AE, Richmond, Surrey, UK
| | - Alexey M Kozlov
- Scientific Computing Group, Heidelberg Institute for Theoretical Studies, 69118, Heidelberg, Germany
| | - Ilia J Leitch
- Royal Botanic Gardens, Kew, TW9 3AE, Richmond, Surrey, UK
| | - Brian S Maitner
- Department of Ecology and Evolutionary Biology, University of Arizona, Tucson, AZ, 85721, USA
| | - Siavash Mirarab
- Department of Electrical and Computer Engineering, University of California, San Diego, San Diego, CA, 92093, USA
| | - William H Piel
- Yale-NUS College, 16 College Avenue West, Singapore, 138527, Republic of Singapore
| | | | - Lisa Pokorny
- Royal Botanic Gardens, Kew, TW9 3AE, Richmond, Surrey, UK
| | - Carsten Rahbek
- Center for Macroecology, Evolution and Climate, University of Copenhagen, Universitetsparken 15, DK-2100, Copenhagen O, Denmark
- Imperial College London, Silwood Park, Buckhurst Road, Ascot, Berkshire, SL5 7PY, UK
| | - Brody Sandel
- Department of Biology, Santa Clara University, Santa Clara, CA, 95053, USA
| | - Stephen A Smith
- Department of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, MI, 48109, USA
| | - Alexandros Stamatakis
- Scientific Computing Group, Heidelberg Institute for Theoretical Studies, 69118, Heidelberg, Germany
- Institute for Theoretical Informatics, Karlsruhe Institute of Technology, 76128, Karlsruhe, Germany
| | - Rutger A Vos
- Naturalis Biodiversity Center, P.O. Box 9517, 2300RA, Leiden, The Netherlands
- Institute of Biology Leiden, P.O. Box 9505, 2300RA, Leiden, The Netherlands
| | - Tandy Warnow
- Department of Computer Science, University of Illinois at Urbana-Champaign, Urbana, IL, 61801, USA
| | | |
Collapse
|
7
|
Peniche G, Olson PD, Bennett DJ, Wong L, Sainsbury AW, Durrant C. Protecting Free-Living Dormice: Molecular Identification of Cestode Parasites in Captive Dormice (Muscardinus avellanarius) Destined for Reintroduction. Ecohealth 2017; 14:106-116. [PMID: 26957436 DOI: 10.1007/s10393-016-1108-x] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/21/2015] [Revised: 02/15/2016] [Accepted: 02/20/2016] [Indexed: 06/05/2023]
Abstract
The success of any population translocation programme relies heavily on the measures implemented to control and monitor the spread of disease. Without these measures, programmes run the risk of releasing immunologically naïve species or, more dangerously, introducing novel infectious agents to native populations. As a precaution, a reintroduction programme for the common or hazel dormouse, Muscardinus avellanarius, in England screens dormice before release following captive breeding. Using PCR sequencing of a range of genes, we tested whether the same species of tapeworm(s) were present in captive and free-living dormice. Whilst only Rodentolepis straminea were identified in free-living dormice, cestode ova found in a captive individual produced a molecular match closely related to Hymenolepis microstoma and a previously unrecorded Rodentolepis species. To prevent putting at risk the free-living population, we recommended the continued treatment of dormice showing tapeworm infection before release. Our work demonstrates how molecular techniques can be used to inform reintroduction programmes, reduce risk from disease and increase chances of reintroduction success.
Collapse
Affiliation(s)
- Gabriela Peniche
- Institute of Zoology, Zoological Society of London, Regent's Park, London, NW1 4RY, UK.
| | - Peter D Olson
- Natural History Museum, Cromwell Road, London, SW7 5BD, UK
| | - Dominic J Bennett
- Institute of Zoology, Zoological Society of London, Regent's Park, London, NW1 4RY, UK
| | - Louise Wong
- Institute of Zoology, Zoological Society of London, Regent's Park, London, NW1 4RY, UK
| | - Anthony W Sainsbury
- Institute of Zoology, Zoological Society of London, Regent's Park, London, NW1 4RY, UK
| | - Christopher Durrant
- Institute of Zoology, Zoological Society of London, Regent's Park, London, NW1 4RY, UK
| |
Collapse
|
8
|
Washburne AD, Silverman JD, Leff JW, Bennett DJ, Darcy JL, Mukherjee S, Fierer N, David LA. Phylogenetic factorization of compositional data yields lineage-level associations in microbiome datasets. PeerJ 2017; 5:e2969. [PMID: 28289558 PMCID: PMC5345826 DOI: 10.7717/peerj.2969] [Citation(s) in RCA: 85] [Impact Index Per Article: 12.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/18/2016] [Accepted: 01/09/2017] [Indexed: 01/06/2023] Open
Abstract
Marker gene sequencing of microbial communities has generated big datasets of microbial relative abundances varying across environmental conditions, sample sites and treatments. These data often come with putative phylogenies, providing unique opportunities to investigate how shared evolutionary history affects microbial abundance patterns. Here, we present a method to identify the phylogenetic factors driving patterns in microbial community composition. We use the method, "phylofactorization," to re-analyze datasets from the human body and soil microbial communities, demonstrating how phylofactorization is a dimensionality-reducing tool, an ordination-visualization tool, and an inferential tool for identifying edges in the phylogeny along which putative functional ecological traits may have arisen.
Collapse
Affiliation(s)
- Alex D. Washburne
- Nicholas School of the Environment, Duke University, Durham, NC, United States
| | - Justin D. Silverman
- Program for Computational Biology and Bioinformatics, Duke University, Durham, NC, United States
- Medical Scientist Training Program, Duke University, Durham, NC, United States
- Center for Genomic and Computational Biology, Duke University, Durham, NC, United States
- Department of Molecular Genetics and Microbiology, Duke University, Durham, NC, United States
| | - Jonathan W. Leff
- Cooperative Institute for Research in Environmental Sciences, University of Colorado, Boulder, CO, United States
| | - Dominic J. Bennett
- Department of Earth Science and Engineering, Imperial College London, London, United Kingdom
- Institute of Zoology, Zoological Society of London, London, United Kingdom
| | - John L. Darcy
- Department of Ecology and Evolution, University of Colorado Boulder, Boulder, CO, United States
| | - Sayan Mukherjee
- Program for Computational Biology and Bioinformatics, Duke University, Durham, NC, United States
- Department of Statistical Science, Mathematics, and Computer Science, Duke University, Durham, NC, United States
| | - Noah Fierer
- Cooperative Institute for Research in Environmental Sciences, University of Colorado, Boulder, CO, United States
| | - Lawrence A. David
- Program for Computational Biology and Bioinformatics, Duke University, Durham, NC, United States
- Center for Genomic and Computational Biology, Duke University, Durham, NC, United States
- Department of Molecular Genetics and Microbiology, Duke University, Durham, NC, United States
| |
Collapse
|
9
|
Bennett DJ, Sutton MD, Turvey ST. treeman: an R package for efficient and intuitive manipulation of phylogenetic trees. BMC Res Notes 2017; 10:30. [PMID: 28061884 PMCID: PMC5219798 DOI: 10.1186/s13104-016-2340-8] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/06/2016] [Accepted: 12/13/2016] [Indexed: 11/16/2022] Open
Abstract
Background Phylogenetic trees are hierarchical structures used for representing the inter-relationships between biological entities. They are the most common tool for representing evolution and are essential to a range of fields across the life sciences. The manipulation of phylogenetic trees—in terms of adding or removing tips—is often performed by researchers not just for reasons of management but also for performing simulations in order to understand the processes of evolution. Despite this, the most common programming language among biologists, R, has few class structures well suited to these tasks. Results We present an R package that contains a new class, called TreeMan, for representing the phylogenetic tree. This class has a list structure allowing phylogenetic trees to be manipulated more efficiently. Computational running times are reduced because of the ready ability to vectorise and parallelise methods. Development is also improved due to fewer lines of code being required for performing manipulation processes. Conclusions We present three use cases—pinning missing taxa to a supertree, simulating evolution with a tree-growth model and detecting significant phylogenetic turnover—that demonstrate the new package’s speed and simplicity. Electronic supplementary material The online version of this article (doi:10.1186/s13104-016-2340-8) contains supplementary material, which is available to authorized users.
Collapse
Affiliation(s)
- Dominic J Bennett
- Department of Earth Science and Engineering, Imperial College London, London, UK. .,Institute of Zoology, Zoological Society of London, London, UK.
| | - Mark D Sutton
- Department of Earth Science and Engineering, Imperial College London, London, UK
| | - Samuel T Turvey
- Institute of Zoology, Zoological Society of London, London, UK
| |
Collapse
|
10
|
Hudson LN, Newbold T, Contu S, Hill SLL, Lysenko I, De Palma A, Phillips HRP, Alhusseini TI, Bedford FE, Bennett DJ, Booth H, Burton VJ, Chng CWT, Choimes A, Correia DLP, Day J, Echeverría‐Londoño S, Emerson SR, Gao D, Garon M, Harrison MLK, Ingram DJ, Jung M, Kemp V, Kirkpatrick L, Martin CD, Pan Y, Pask‐Hale GD, Pynegar EL, Robinson AN, Sanchez‐Ortiz K, Senior RA, Simmons BI, White HJ, Zhang H, Aben J, Abrahamczyk S, Adum GB, Aguilar‐Barquero V, Aizen MA, Albertos B, Alcala EL, del Mar Alguacil M, Alignier A, Ancrenaz M, Andersen AN, Arbeláez‐Cortés E, Armbrecht I, Arroyo‐Rodríguez V, Aumann T, Axmacher JC, Azhar B, Azpiroz AB, Baeten L, Bakayoko A, Báldi A, Banks JE, Baral SK, Barlow J, Barratt BIP, Barrico L, Bartolommei P, Barton DM, Basset Y, Batáry P, Bates AJ, Baur B, Bayne EM, Beja P, Benedick S, Berg Å, Bernard H, Berry NJ, Bhatt D, Bicknell JE, Bihn JH, Blake RJ, Bobo KS, Bóçon R, Boekhout T, Böhning‐Gaese K, Bonham KJ, Borges PAV, Borges SH, Boutin C, Bouyer J, Bragagnolo C, Brandt JS, Brearley FQ, Brito I, Bros V, Brunet J, Buczkowski G, Buddle CM, Bugter R, Buscardo E, Buse J, Cabra‐García J, Cáceres NC, Cagle NL, Calviño‐Cancela M, Cameron SA, Cancello EM, Caparrós R, Cardoso P, Carpenter D, Carrijo TF, Carvalho AL, Cassano CR, Castro H, Castro‐Luna AA, Rolando CB, Cerezo A, Chapman KA, Chauvat M, Christensen M, Clarke FM, Cleary DF, Colombo G, Connop SP, Craig MD, Cruz‐López L, Cunningham SA, D'Aniello B, D'Cruze N, da Silva PG, Dallimer M, Danquah E, Darvill B, Dauber J, Davis ALV, Dawson J, de Sassi C, de Thoisy B, Deheuvels O, Dejean A, Devineau J, Diekötter T, Dolia JV, Domínguez E, Dominguez‐Haydar Y, Dorn S, Draper I, Dreber N, Dumont B, Dures SG, Dynesius M, Edenius L, Eggleton P, Eigenbrod F, Elek Z, Entling MH, Esler KJ, de Lima RF, Faruk A, Farwig N, Fayle TM, Felicioli A, Felton AM, Fensham RJ, Fernandez IC, Ferreira CC, Ficetola GF, Fiera C, Filgueiras BKC, Fırıncıoğlu HK, Flaspohler D, Floren A, Fonte SJ, Fournier A, Fowler RE, Franzén M, Fraser LH, Fredriksson GM, Freire GB, Frizzo TLM, Fukuda D, Furlani D, Gaigher R, Ganzhorn JU, García KP, Garcia‐R JC, Garden JG, Garilleti R, Ge B, Gendreau‐Berthiaume B, Gerard PJ, Gheler‐Costa C, Gilbert B, Giordani P, Giordano S, Golodets C, Gomes LGL, Gould RK, Goulson D, Gove AD, Granjon L, Grass I, Gray CL, Grogan J, Gu W, Guardiola M, Gunawardene NR, Gutierrez AG, Gutiérrez‐Lamus DL, Haarmeyer DH, Hanley ME, Hanson T, Hashim NR, Hassan SN, Hatfield RG, Hawes JE, Hayward MW, Hébert C, Helden AJ, Henden J, Henschel P, Hernández L, Herrera JP, Herrmann F, Herzog F, Higuera‐Diaz D, Hilje B, Höfer H, Hoffmann A, Horgan FG, Hornung E, Horváth R, Hylander K, Isaacs‐Cubides P, Ishida H, Ishitani M, Jacobs CT, Jaramillo VJ, Jauker B, Hernández FJ, Johnson MF, Jolli V, Jonsell M, Juliani SN, Jung TS, Kapoor V, Kappes H, Kati V, Katovai E, Kellner K, Kessler M, Kirby KR, Kittle AM, Knight ME, Knop E, Kohler F, Koivula M, Kolb A, Kone M, Kőrösi Á, Krauss J, Kumar A, Kumar R, Kurz DJ, Kutt AS, Lachat T, Lantschner V, Lara F, Lasky JR, Latta SC, Laurance WF, Lavelle P, Le Féon V, LeBuhn G, Légaré J, Lehouck V, Lencinas MV, Lentini PE, Letcher SG, Li Q, Litchwark SA, Littlewood NA, Liu Y, Lo‐Man‐Hung N, López‐Quintero CA, Louhaichi M, Lövei GL, Lucas‐Borja ME, Luja VH, Luskin MS, MacSwiney G MC, Maeto K, Magura T, Mallari NA, Malone LA, Malonza PK, Malumbres‐Olarte J, Mandujano S, Måren IE, Marin‐Spiotta E, Marsh CJ, Marshall EJP, Martínez E, Martínez Pastur G, Moreno Mateos D, Mayfield MM, Mazimpaka V, McCarthy JL, McCarthy KP, McFrederick QS, McNamara S, Medina NG, Medina R, Mena JL, Mico E, Mikusinski G, Milder JC, Miller JR, Miranda‐Esquivel DR, Moir ML, Morales CL, Muchane MN, Muchane M, Mudri‐Stojnic S, Munira AN, Muoñz‐Alonso A, Munyekenye BF, Naidoo R, Naithani A, Nakagawa M, Nakamura A, Nakashima Y, Naoe S, Nates‐Parra G, Navarrete Gutierrez DA, Navarro‐Iriarte L, Ndang'ang'a PK, Neuschulz EL, Ngai JT, Nicolas V, Nilsson SG, Noreika N, Norfolk O, Noriega JA, Norton DA, Nöske NM, Nowakowski AJ, Numa C, O'Dea N, O'Farrell PJ, Oduro W, Oertli S, Ofori‐Boateng C, Oke CO, Oostra V, Osgathorpe LM, Otavo SE, Page NV, Paritsis J, Parra‐H A, Parry L, Pe'er G, Pearman PB, Pelegrin N, Pélissier R, Peres CA, Peri PL, Persson AS, Petanidou T, Peters MK, Pethiyagoda RS, Phalan B, Philips TK, Pillsbury FC, Pincheira‐Ulbrich J, Pineda E, Pino J, Pizarro‐Araya J, Plumptre AJ, Poggio SL, Politi N, Pons P, Poveda K, Power EF, Presley SJ, Proença V, Quaranta M, Quintero C, Rader R, Ramesh BR, Ramirez‐Pinilla MP, Ranganathan J, Rasmussen C, Redpath‐Downing NA, Reid JL, Reis YT, Rey Benayas JM, Rey‐Velasco JC, Reynolds C, Ribeiro DB, Richards MH, Richardson BA, Richardson MJ, Ríos RM, Robinson R, Robles CA, Römbke J, Romero‐Duque LP, Rös M, Rosselli L, Rossiter SJ, Roth DS, Roulston TH, Rousseau L, Rubio AV, Ruel J, Sadler JP, Sáfián S, Saldaña‐Vázquez RA, Sam K, Samnegård U, Santana J, Santos X, Savage J, Schellhorn NA, Schilthuizen M, Schmiedel U, Schmitt CB, Schon NL, Schüepp C, Schumann K, Schweiger O, Scott DM, Scott KA, Sedlock JL, Seefeldt SS, Shahabuddin G, Shannon G, Sheil D, Sheldon FH, Shochat E, Siebert SJ, Silva FAB, Simonetti JA, Slade EM, Smith J, Smith‐Pardo AH, Sodhi NS, Somarriba EJ, Sosa RA, Soto Quiroga G, St‐Laurent M, Starzomski BM, Stefanescu C, Steffan‐Dewenter I, Stouffer PC, Stout JC, Strauch AM, Struebig MJ, Su Z, Suarez‐Rubio M, Sugiura S, Summerville KS, Sung Y, Sutrisno H, Svenning J, Teder T, Threlfall CG, Tiitsaar A, Todd JH, Tonietto RK, Torre I, Tóthmérész B, Tscharntke T, Turner EC, Tylianakis JM, Uehara‐Prado M, Urbina‐Cardona N, Vallan D, Vanbergen AJ, Vasconcelos HL, Vassilev K, Verboven HAF, Verdasca MJ, Verdú JR, Vergara CH, Vergara PM, Verhulst J, Virgilio M, Vu LV, Waite EM, Walker TR, Wang H, Wang Y, Watling JI, Weller B, Wells K, Westphal C, Wiafe ED, Williams CD, Willig MR, Woinarski JCZ, Wolf JHD, Wolters V, Woodcock BA, Wu J, Wunderle JM, Yamaura Y, Yoshikura S, Yu DW, Zaitsev AS, Zeidler J, Zou F, Collen B, Ewers RM, Mace GM, Purves DW, Scharlemann JPW, Purvis A. The database of the PREDICTS (Projecting Responses of Ecological Diversity In Changing Terrestrial Systems) project. Ecol Evol 2017; 7:145-188. [PMID: 28070282 PMCID: PMC5215197 DOI: 10.1002/ece3.2579] [Citation(s) in RCA: 81] [Impact Index Per Article: 11.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/22/2016] [Revised: 09/10/2016] [Accepted: 09/22/2016] [Indexed: 11/29/2022] Open
Abstract
The PREDICTS project-Projecting Responses of Ecological Diversity In Changing Terrestrial Systems (www.predicts.org.uk)-has collated from published studies a large, reasonably representative database of comparable samples of biodiversity from multiple sites that differ in the nature or intensity of human impacts relating to land use. We have used this evidence base to develop global and regional statistical models of how local biodiversity responds to these measures. We describe and make freely available this 2016 release of the database, containing more than 3.2 million records sampled at over 26,000 locations and representing over 47,000 species. We outline how the database can help in answering a range of questions in ecology and conservation biology. To our knowledge, this is the largest and most geographically and taxonomically representative database of spatial comparisons of biodiversity that has been collated to date; it will be useful to researchers and international efforts wishing to model and understand the global status of biodiversity.
Collapse
Affiliation(s)
| | - Tim Newbold
- United Nations Environment Programme World Conservation Monitoring CentreCambridgeUK
- Department of Genetics, Evolution and EnvironmentCentre for Biodiversity and EnvironmentResearchUniversity College LondonLondonUK
| | - Sara Contu
- Department of Life SciencesNatural History MuseumLondonUK
| | - Samantha L. L. Hill
- Department of Life SciencesNatural History MuseumLondonUK
- United Nations Environment Programme World Conservation Monitoring CentreCambridgeUK
| | - Igor Lysenko
- Department of Life SciencesImperial College LondonAscotUK
| | - Adriana De Palma
- Department of Life SciencesNatural History MuseumLondonUK
- Department of Life SciencesImperial College LondonAscotUK
| | - Helen R. P. Phillips
- Department of Life SciencesNatural History MuseumLondonUK
- Department of Life SciencesImperial College LondonAscotUK
| | | | | | | | - Hollie Booth
- United Nations Environment Programme World Conservation Monitoring CentreCambridgeUK
- Frankfurt Zoological SocietyAfrica Regional OfficeArushaTanzania
| | - Victoria J. Burton
- Department of Life SciencesNatural History MuseumLondonUK
- Science and Solutions for a Changing Planet DTP and the Department of Life SciencesImperial College LondonSouth KensingtonLondonUK
| | | | - Argyrios Choimes
- Department of Life SciencesNatural History MuseumLondonUK
- Department of Life SciencesImperial College LondonAscotUK
| | | | - Julie Day
- Department of Life SciencesImperial College LondonAscotUK
| | - Susy Echeverría‐Londoño
- Department of Life SciencesNatural History MuseumLondonUK
- Department of Life SciencesImperial College LondonAscotUK
| | | | - Di Gao
- Department of Life SciencesNatural History MuseumLondonUK
| | - Morgan Garon
- Department of Life SciencesImperial College LondonAscotUK
| | | | | | - Martin Jung
- School of Life SciencesUniversity of SussexBrightonUK
| | - Victoria Kemp
- School of Biological and Chemical SciencesQueen Mary University of LondonLondonUK
| | - Lucinda Kirkpatrick
- School of Biological and Ecological SciencesUniversity of StirlingStirlingUK
| | - Callum D. Martin
- School of Biological SciencesRoyal Holloway University of LondonEgham, SurreyUK
| | - Yuan Pan
- Department of Animal and Plant SciencesUniversity of SheffieldWestern BankSheffieldUK
| | | | - Edwin L. Pynegar
- School of EnvironmentNatural Resources and GeographyBangor UniversityBangorGwyneddUK
| | | | | | - Rebecca A. Senior
- Department of Animal and Plant SciencesUniversity of SheffieldWestern BankSheffieldUK
| | | | - Hannah J. White
- School of Biological SciencesQueen's University BelfastBelfastUK
| | | | - Job Aben
- Institute of Biological and Environmental SciencesUniversity of AberdeenAberdeenUK
- Evolutionary Ecology GroupUniversity of AntwerpAntwerpBelgium
| | | | - Gilbert B. Adum
- Wildlife and Range Management DepartmentFaculty of Renewable Natural Resources (FRNR)College of Agriculture and Natural Resources (CANR)Kwame Nkrumah University of Science and Technology (KNUST)KumasiGhana
- SAVE THE FROGS! GhanaAdum‐KumasiGhana
| | | | - Marcelo A. Aizen
- Laboratorio Ecotono‐CRUBUniversidad Nacional del Comahue and INIBIOMARío NegroArgentina
| | - Belén Albertos
- Departamento de BotánicaFacultad de FarmaciaUniversidad de ValenciaBurjassot, ValenciaSpain
| | - E. L. Alcala
- Marine LaboratorySilliman University‐Angelo King Center for Research and Environmental ManagementSilliman UniversityDumaguete CityPhilippines
| | - Maria del Mar Alguacil
- Department of Soil and Water ConservationCSIC‐Centro de Edafología y Biología Aplicada del SeguraMurciaSpain
| | - Audrey Alignier
- INRAUR 0980 SAD‐PaysageRennes CedexFrance
- INRAUMR 1201 DYNAFORCastanet Tolosan CedexFrance
| | - Marc Ancrenaz
- HUTAN – Kinabatangan Orang‐utan Conservation ProgrammeKota KinabaluMalaysia
- Borneo FuturesKota KinabaluMalaysia
| | | | - Enrique Arbeláez‐Cortés
- Museo de ZoologíaFacultad de CienciasUniversidad Nacional Autónoma de MéxicoMéxico D.F.Mexico
- Colección de TejidosInstituto de Investigación de Recursos Biológicos Alexander von HumboldtValle del CaucaColombia
| | | | - Víctor Arroyo‐Rodríguez
- Instituto de Investigaciones en Ecosistemas y SustentabilidadUniversidad Nacional Autónoma de MéxicoMoreliaMexico
| | - Tom Aumann
- College of Science, Engineering & HealthRMIT UniversityMelbourneVic.Australia
| | - Jan C. Axmacher
- UCL Department of GeographyUniversity College LondonLondonUK
| | - Badrul Azhar
- Biodiversity UnitInstitute of BioscienceUniversiti Putra MalaysiaSerdangMalaysia
- Faculty of ForestryUniversiti Putra MalaysiaSerdangMalaysia
| | - Adrián B. Azpiroz
- Departamento de Biodiversidad y GenéticaInstituto de Investigaciones Biológicas Clemente EstableMontevideoUruguay
| | - Lander Baeten
- Forest & Nature LabDepartment of Forest and Water ManagementGhent UniversityGontrodeBelgium
- Terrestrial Ecology UnitDepartment of BiologyGhent UniversityGhentBelgium
| | - Adama Bakayoko
- UFR Science de la NatureUniversité Naangui AbrogouaAbidjanIvory Coast
- Centre Suisse de Recherches Scientifiques en Côte d'IvoireAbidjanIvory Coast
| | - András Báldi
- MTA Centre for Ecological ResearchVácrátótHungary
| | | | | | - Jos Barlow
- Lancaster Environment CentreLancaster UniversityLancasterUK
- MCT/Museu Paraense Emílio GoeldiBelémBrazil
| | | | - Lurdes Barrico
- Centre for Functional EcologyDepartment of Life SciencesUniversity of CoimbraCoimbraPortugal
| | | | - Diane M. Barton
- AgResearch LimitedInvermay Agricultural CentrePuddle Alley, MosgielNew Zealand
| | - Yves Basset
- Smithsonian Tropical Research InstituteBalboaAnconPanama CityRepublic of Panama
| | - Péter Batáry
- AgroecologyDepartment of Crop SciencesGeorg‐August UniversityGöttingenGermany
| | - Adam J. Bates
- BiosciencesSchool of Science & TechnologyNottingham Trent UniversityClifton, NottinghamUK
- University of BirminghamEdgbaston, BirminghamUK
| | - Bruno Baur
- Section of Conservation BiologyDepartment of Environmental SciencesUniversity of BaselBaselSwitzerland
| | - Erin M. Bayne
- Department of Biological SciencesUniversity of AlbertaEdmontonABCanada
| | - Pedro Beja
- CIBIO/InBioCentro de Investigação em Biodiversidade e Recursos GenéticosUniversidade do PortoVairãoPortugal
| | - Suzan Benedick
- Faculty of Sustainable AgricultureUniversiti Malaysia SabahSandakanMalaysia
| | - Åke Berg
- The Swedish University of Agricultural SciencesThe Swedish Biodiversity CentreUppsalaSweden
| | - Henry Bernard
- Institute for Tropical Biology and ConservationUniversiti Malaysia Sabah, Jalan UMSKota KinabaluMalaysia
| | | | - Dinesh Bhatt
- Department of Zoology & Environmental ScienceGurukula Kangri UniversityHaridwarIndia
| | - Jake E. Bicknell
- Durrell Institute of Conservation and Ecology (DICE)School of Anthropology and ConservationUniversity of KentCanterburyUK
- Iwokrama International Centre for Rainforest Conservation and DevelopmentGeorgetownGuyana
| | - Jochen H. Bihn
- Department of Ecology‐Animal EcologyFaculty of BiologyPhilipps‐Universität MarburgMarburgGermany
| | - Robin J. Blake
- Compliance Services InternationalPentlands Science ParkPenicuik, EdinburghUK
- Centre for Agri‐Environmental ResearchSchool of Agriculture, Policy and DevelopmentUniversity of ReadingReadingUK
| | - Kadiri S. Bobo
- School for the Training of Wildlife Specialists GarouaGarouaCameroon
- Department of ForestryFaculty of Agronomy and Agricultural SciencesUniversity of DschangDschangCameroon
| | - Roberto Bóçon
- Mater Natura – Instituto de Estudos AmbientaisCuritibaBrazil
| | - Teun Boekhout
- CBS Fungal Biodiversity Centre (CBS‐KNAW)UtrechtThe Netherlands
| | - Katrin Böhning‐Gaese
- Senckenberg Biodiversity and Climate Research Centre (BiK‐F)Frankfurt am MainGermany
- Institute for Ecology, Evolution & DiversityGoethe University FrankfurtBiologicum, Frankfurt am MainGermany
| | - Kevin J. Bonham
- School of Land and FoodUniversity of TasmaniaSandy BayTas.Australia
| | - Paulo A. V. Borges
- Departamento de Ciências AgráriascE3c – Centre for Ecology, Evolution and Environmental Changes/Azorean Biodiversity Group and Universidade dos AçoresAngra do Heroísmo, AçoresPortugal
| | | | - Céline Boutin
- Environment and Climate Change Canada, Science & Technology BranchCarleton UniversityOttawaONCanada
| | - Jérémy Bouyer
- Unité Mixte de Recherche Contrôle des Maladies Animales Exotiques et EmergentesCentre de Coopération Internationale en Recherche Agronomique pour le Développement (CIRAD)MontpellierFrance
- Unité Mixte de Recherche 1309 Contrôle des Maladies Animales Exotiques et EmergentesInstitut national de la recherche agronomique (INRA)MontpellierFrance
| | - Cibele Bragagnolo
- Departamento de ZoologiaInstituto de BiociênciasUniversidade de São PauloSão PauloBrazil
| | - Jodi S. Brandt
- Human Environment Systems CenterBoise State UniversityBoiseIDUSA
| | - Francis Q. Brearley
- School of Science and the EnvironmentManchester Metropolitan UniversityManchesterUK
| | | | - Vicenç Bros
- Natural Parks Technical OfficeDiputació de BarcelonaBarcelonaSpain
- Natural History Museum of BarcelonaBarcelona, CataloniaSpain
| | - Jörg Brunet
- Swedish University of Agricultural SciencesSouthern Swedish Forest Research CentreAlnarpSweden
| | | | | | - Rob Bugter
- Alterra, part of Wageningen University and ResearchRB WageningenThe Netherlands
| | - Erika Buscardo
- Departamento de Ciências da VidaCentro de Ecologia FuncionalUniversidade de CoimbraCoimbraPortugal
- Departamento de Biologia VegetalInstituto de BiologiaUniversidade Estadual de CampinasCampinasBrazil
- Department of BotanySchool of Natural SciencesTrinity College DublinDublin 2Ireland
| | - Jörn Buse
- Institute for Environmental SciencesUniversity Koblenz‐LandauLandauGermany
| | - Jimmy Cabra‐García
- Departamento de ZoologiaInstituto de BiociênciasUniversidade de São PauloSão PauloBrazil
- Departamento de BiologíaGrupo de investigación en BiologíaEcología y Manejo de HormigasSección de EntomologíaUniversidad del ValleCaliColombia
| | - Nilton C. Cáceres
- Department of BiologyFederal University of Santa Maria, CCNESanta MariaBrazil
| | | | - María Calviño‐Cancela
- Department of Ecology and Animal BiologyFaculty of SciencesUniversity of VigoVigoSpain
| | - Sydney A. Cameron
- Department of EntomologyUniversity of IllinoisUrbanaILUSA
- Program in Ecology, Evolution and Conservation BiologyUniversity of IllinoisUrbanaILUSA
| | | | - Rut Caparrós
- Departamento de BotánicaFacultad de FarmaciaUniversidad de ValenciaBurjassot, ValenciaSpain
- Departamento de Biología (Botánica)Facultad de CienciasUniversidad Autonoma de MadridMadridSpain
| | - Pedro Cardoso
- Departamento de Ciências AgráriascE3c – Centre for Ecology, Evolution and Environmental Changes/Azorean Biodiversity Group and Universidade dos AçoresAngra do Heroísmo, AçoresPortugal
- Finnish Museum of Natural HistoryUniversity of HelsinkiHelsinkiFinland
| | - Dan Carpenter
- Parks and CountrysideBracknell Forest CouncilBracknellUK
- Soil Biodiversity GroupLife Sciences DepartmentNatural History MuseumLondonUK
| | | | | | - Camila R. Cassano
- Laboratório de Ecologia Aplicada à ConservaçãoUniversidade Estadual de Santa CruzIlhéusBrazil
| | - Helena Castro
- Centre for Functional EcologyDepartment of Life SciencesUniversity of CoimbraCoimbraPortugal
| | | | - Cerda B. Rolando
- Centro Agronómico Tropical de Investigación y Enseñanza (CATIE)Tropical Agricultural Research and Higher Education CenterTurrialbaCosta Rica
| | - Alexis Cerezo
- Department of Quantitative Methods and Information SystemsFaculty of AgronomyUniversity of Buenos AiresBuenos AiresArgentina
| | | | - Matthieu Chauvat
- Normandie UnivEA 1293 ECODIV‐RouenSFR SCALEUFR Sciences et TechniquesMont Saint Aignan CedexFrance
| | | | - Francis M. Clarke
- Institute of Biological and Environmental SciencesUniversity of AberdeenAberdeenUK
| | | | - Giorgio Colombo
- Dipartimento di BiologiaUniversità degli Studi di MilanoMilanoItaly
| | - Stuart P. Connop
- Sustainability Research InstituteUniversity of East LondonLondonUK
| | - Michael D. Craig
- Centre of Excellence for Environmental DecisionsSchool of Plant BiologyUniversity of Western AustraliaNedlandsWAAustralia
- School of Veterinary and Life SciencesMurdoch UniversityMurdochWAAustralia
| | - Leopoldo Cruz‐López
- Grupo Ecología de Artrópodos y Manejo de PlagasEl Colegio de la Frontera SurTapachulaMexico
| | | | - Biagio D'Aniello
- Dipartimento di BiologiaUniversità di Napoli Federico IINapoliItaly
| | - Neil D'Cruze
- Wildlife Conservation Research UnitDepartment of ZoologyUniversity of OxfordRecanati‐Kaplan CentreTubneyUK
| | - Pedro Giovâni da Silva
- Programa de Pós‐Graduação em EcologiaUniversidade Federal de Santa CatarinaFlorianópolisBrazil
| | - Martin Dallimer
- Sustainability Research InstituteSchool of Earth and EnvironmentUniversity of LeedsLeedsUK
| | - Emmanuel Danquah
- Wildlife and Range Management DepartmentFaculty of Renewable Natural Resources (FRNR)College of Agriculture and Natural Resources (CANR)Kwame Nkrumah University of Science and Technology (KNUST)KumasiGhana
| | | | - Jens Dauber
- Thünen Institute of BiodiversityBraunschweigGermany
| | - Adrian L. V. Davis
- Scarab Research GroupDepartment of Zoology & EntomologyUniversity of PretoriaHatfieldSouth Africa
| | - Jeff Dawson
- Durrell Wildlife Conservation TrustTrinityJersey
| | | | | | - Olivier Deheuvels
- CIRADUMR SystemMontpellierFrance
- ICRAFRegional Office for Latin AmericaLimaPeru
| | - Alain Dejean
- UPSINPLaboratoire Écologie Fonctionnelle et EnvironnementUniversité de ToulouseToulouseFrance
- CNRS – UMR 5245EcolabToulouseFrance
- CNRS – UMR 8172Écologie des Forêts de GuyaneKourou cedexFrance
| | | | - Tim Diekötter
- Department of Landscape EcologyInstitute of Natural Resource ConservationKiel UniversityKielGermany
- Department of Biology, Nature ConservationUniversity MarburgMarburgGermany
- Institute of Integrative BiologyETH ZürichZürichSwitzerland
| | - Jignasu V. Dolia
- Post Graduate Program in Wildlife Biology and ConservationNational Centre for Biological SciencesBangaloreIndia
- Wildlife Conservation Society (India Program)Centre for Wildlife StudiesBangaloreIndia
| | - Erwin Domínguez
- Instituto de Investigaciones Agropecuarias – INIA – CRI – KampenaikePunta ArenasChile
| | | | - Silvia Dorn
- Applied EntomologyETH ZürichZürichSwitzerland
| | - Isabel Draper
- Departamento de Biología (Botánica)Facultad de CienciasUniversidad Autonoma de MadridMadridSpain
| | - Niels Dreber
- Unit for Environmental Sciences and ManagementNorth‐West UniversityPotchefstroomSouth Africa
- Department of Ecosystem ModellingBüsgen‐InstituteGeorg‐August‐University of GöttingenGöttingenGermany
| | | | - Simon G. Dures
- Department of Life SciencesImperial College LondonAscotUK
- Institute of ZoologyZoological Society of London, Regents ParkLondonUK
| | - Mats Dynesius
- Department of Ecology and Environmental ScienceUmeå UniversityUmeåSweden
| | - Lars Edenius
- Department of Wildlife, Fish and Environmental StudiesSwedish University of Agricultural SciencesUmeaSweden
| | - Paul Eggleton
- Department of Life SciencesNatural History MuseumLondonUK
| | - Felix Eigenbrod
- Centre for Biological SciencesUniversity of SouthamptonSouthamptonUK
| | - Zoltán Elek
- MTA‐ELTE‐MTM Ecology Research GroupHungarian Academy of Sciencesc/o Biological InstituteEötvös Lóránd UniversityBudapestHungary
- Hungarian Natural History MuseumBudapestHungary
| | - Martin H. Entling
- Institute for Environmental SciencesUniversity of Koblenz‐LandauLandauGermany
| | - Karen J. Esler
- Department of Conservation Ecology and EntomologyStellenbosch UniversityMatielandSouth Africa
- Centre for Invasion BiologyStellenbosch UniversityMatielandSouth Africa
| | - Ricardo F. de Lima
- CE3C – Centre for Ecology, Evolution and Environmental ChangesFaculdade de CiênciasUniversidade de LisboaLisboaPortugal
- Associação Monte PicoMonte CaféMé ZóchiSão Tomé and Príncipe
| | - Aisyah Faruk
- Kew GardensWakehurstArdingly, Haywards Heath, SussexUK
- Wild AsiaUpper PenthouseWisma RKTKuala LumpurMalaysia
| | - Nina Farwig
- Conservation EcologyFaculty of BiologyPhilipps‐Universität MarburgMarburgGermany
| | - Tom M. Fayle
- Department of Life SciencesImperial College LondonAscotUK
- Institute of EntomologyBiology Centre of Academy of Sciences Czech RepublicČeské BudějoviceCzech Republic
- Institute for Tropical Biology and ConservationUniversiti Malaysia SabahKota KinabaluMalaysia
| | | | | | - Roderick J. Fensham
- Department of Biological SciencesUniversity of QueenslandSt LuciaQldAustralia
- Queensland Herbarium (DSITIA)ToowongQldAustralia
| | | | | | | | - Cristina Fiera
- Institute of Biology Bucharest of Romanian AcademyBucharestRomania
| | | | | | - David Flaspohler
- School of Forest Resources and Environmental ScienceMichigan Technological UniversityHoughtonMIUSA
| | - Andreas Floren
- Department of Animal Ecology and Tropical BiologyBiocenterUniversity of WürzburgWürzburgGermany
| | - Steven J. Fonte
- Department of Plant SciencesUniversity of CaliforniaDavisCAUSA
- Department of Soil and Crop SciencesColorado State UniversityFort CollinsCOUSA
| | | | | | - Markus Franzén
- Department of Community EcologyUFZHelmholtz Centre for Environmental ResearchHalleGermany
| | - Lauchlan H. Fraser
- Department of Natural Resource SciencesThompson Rivers UniversityKamloopsBCCanada
| | - Gabriella M. Fredriksson
- Institute for Biodiversity and Ecosystem Dynamics (IBED)University of AmsterdamGE AmsterdamThe Netherlands
- PanEco/Yayasan Ekosistem LestariSumatran Orangutan Conservation ProgrammeMedanIndonesia
| | - Geraldo B. Freire
- Programa de Pós Graduação em EcologiaUniversidade de BrasíliaBrasília, Distrito FederalBrazil
| | - Tiago L. M. Frizzo
- Programa de Pós Graduação em EcologiaUniversidade de BrasíliaBrasília, Distrito FederalBrazil
| | | | - Dario Furlani
- Dipartimento di BiologiaUniversità degli Studi di MilanoMilanoItaly
| | - René Gaigher
- Department of Conservation Ecology and EntomologyStellenbosch UniversityMatielandSouth Africa
| | | | - Karla P. García
- Departamento de ZoologíaFacultad de Ciencias Naturales y OceanográficasUniversidad de ConcepciónConcepciónChile
- Departamento de Planificación TerritorialFacultad de Ciencias AmbientalesCentro EULA‐ChileUniversidad de ConcepciónConcepciónChile
| | | | - Jenni G. Garden
- Seed Consulting ServicesAdelaideSAAustralia
- Environmental Futures Research InstituteGriffith UniversityBrisbaneQldAustralia
- Barbara Hardy InstituteUniversity of South AustraliaMawson LakesSAAustralia
| | - Ricardo Garilleti
- Departamento de BotánicaFacultad de FarmaciaUniversidad de ValenciaBurjassot, ValenciaSpain
| | - Bao‐Ming Ge
- Jiangsu Key Laboratory for Bioresources of Saline SoilsYancheng Teachers UniversityYanchengChina
| | - Benoit Gendreau‐Berthiaume
- Département des sciences biologiquesCentre d’études de la forêt Université du Québec à Montréal Succursale Centre‐villeMontréalQCCanada
| | | | - Carla Gheler‐Costa
- Ecologia Aplicada/Applied EcologyUniversidade Sagrado Coração (USC)BauruBrazil
| | - Benjamin Gilbert
- Department of Ecology and Evolutionary BiologyUniversity of TorontoTorontoONCanada
| | | | | | | | | | - Rachelle K. Gould
- Rubenstein School of Natural ResourcesUniversity of VermontBurlingtonVTUSA
| | - Dave Goulson
- School of Life SciencesUniversity of SussexBrightonUK
| | - Aaron D. Gove
- Astron Environmental ServicesEast PerthWAAustralia
- Department of Environment and AgricultureCurtin UniversityPerthWAAustralia
| | - Laurent Granjon
- Centre de Biologie pour la Gestion des Populations (CBGP)INRAIRDCIRADSUPAGROMontferrier‐sur‐Lez cedexFrance
| | - Ingo Grass
- AgroecologyDepartment of Crop SciencesGeorg‐August UniversityGöttingenGermany
- Conservation EcologyFaculty of BiologyPhilipps‐Universität MarburgMarburgGermany
| | - Claudia L. Gray
- School of Life SciencesUniversity of SussexBrightonUK
- Department of ZoologyUniversity of OxfordOxfordUK
| | - James Grogan
- Department of Biological SciencesMount Holyoke CollegeSouth HadleyMAUSA
| | - Weibin Gu
- China International Engineering Consulting CorporationHaidian DistrictBeijingChina
| | | | | | - Alvaro G. Gutierrez
- Departamento de Ciencias Ambientales y Recursos Naturales RenovablesFacultad de Ciencias AgronómicasUniversidad de ChileLa PintanaChile
| | | | - Daniela H. Haarmeyer
- Biodiversity, Evolution and Ecology of Plants (BEE)Biocentre Klein Flottbek and Botanical GardenUniversity of HamburgHamburgGermany
| | - Mick E. Hanley
- School of Biological ScienceUniversity of PlymouthPlymouthUK
| | | | - Nor R. Hashim
- International University of Malaya‐Wales, Jalan Tun IsmailKuala LumpurMalaysia
| | - Shombe N. Hassan
- Department of Wildlife ManagementSokoine University of AgricultureMorogoroTanzania
| | | | - Joseph E. Hawes
- Animal & Environment Research GroupDepartment of Life SciencesAnglia Ruskin UniversityCambridgeUK
| | - Matt W. Hayward
- Walter Sisulu UniversityMthatha, TranskeiSouth Africa
- Centre for African Conservation EcologyNelson Mandela Metropolitan UniversityPort ElizabethSouth Africa
- College of Natural SciencesBangor UniversityBangor, GwyneddUK
| | - Christian Hébert
- Natural Resources CanadaCanadian Forest ServiceLaurentian Forestry CentreQuébecQCCanada
| | - Alvin J. Helden
- Animal & Environment Research GroupDepartment of Life SciencesAnglia Ruskin UniversityCambridgeUK
| | - John‐André Henden
- Department of Arctic and Marine BiologyUniversity of TromsøTromsøNorway
| | | | - Lionel Hernández
- Universidad Nacional Experimental de GuayanaPuerto OrdazVenezuela
| | - James P. Herrera
- Richard Gilder Graduate SchoolAmerican Museum of Natural HistoryNew YorkNYUSA
| | - Farina Herrmann
- AgroecologyDepartment of Crop SciencesGeorg‐August UniversityGöttingenGermany
| | | | | | - Branko Hilje
- Earth and Atmospheric Sciences DepartmentUniversity of AlbertaEdmontonABCanada
| | - Hubert Höfer
- State Museum of Natural History Karlsruhe (SMNK)BiosciencesKarlsruheGermany
| | - Anke Hoffmann
- Museum für Naturkunde – Leibniz Institute for Evolution and Biodiversity ScienceBerlinGermany
| | - Finbarr G. Horgan
- University of Technology SydneySydneyNSWAustralia
- University of New BrunswickFrederictonNBCanada
| | - Elisabeth Hornung
- Department of EcologyFaculty of Veterinary ScienceSZIE UniversityBudapestHungary
| | - Roland Horváth
- Department of EcologyUniversity of DebrecenDebrecenHungary
| | - Kristoffer Hylander
- Department of Ecology, Environment and Plant SciencesStockholm UniversityStockholmSweden
| | - Paola Isaacs‐Cubides
- Instituto de Investigaciones y Recursos Biológicos Alexander von HumboldtBogotá, Colombia
| | - Hiroaki Ishida
- Institute of Natural and Environmental SciencesUniversity of HyogoHyogoJapan
| | | | - Carmen T. Jacobs
- Scarab Research GroupDepartment of Zoology & EntomologyUniversity of PretoriaHatfieldSouth Africa
| | - Víctor J. Jaramillo
- Instituto de Investigaciones en Ecosistemas y SustentabilidadUniversidad Nacional Autónoma de MéxicoMoreliaMéxico C.P.Mexico
| | - Birgit Jauker
- Department of Animal EcologyJustus‐Liebig‐UniversityGiessenGermany
| | | | | | - Virat Jolli
- Biodiversity and Environmental SustainabilityRohiniIndia
- Department of Environmental StudiesShivaji College (University of Delhi)New DelhiIndia
| | - Mats Jonsell
- Department of EcologySwedish University of Agricultural SciencesUppsalaSweden
| | - S. Nur Juliani
- School of Biological SciencesUniversiti Sains MalaysiaMindenMalaysia
| | | | | | - Heike Kappes
- Cologne BiocenterZoological InstituteUniversity of CologneKölnGermany
| | - Vassiliki Kati
- Department of Environmental & Natural Resources ManagementUniversity of PatrasAgrinioGreece
| | - Eric Katovai
- Centre for Tropical Environmental and Sustainability Science (TESS) & College of Marine and Environmental SciencesJames Cook UniversityCairnsQldAustralia
- School of Science and TechnologyPacific Adventist UniversityPort MoresbyPapua New Guinea
| | - Klaus Kellner
- Unit for Environmental Sciences and ManagementNorth‐West UniversityPotchefstroomSouth Africa
| | - Michael Kessler
- Department of Systematic and Evolutionary BotanyUniversity of ZürichZürichSwitzerland
| | - Kathryn R. Kirby
- Department of Ecology and Evolutionary Biology and Department of Geography and PlanningUniversity of TorontoTorontoONCanada
| | | | | | - Eva Knop
- Institute of Ecology and EvolutionUniversity of BernBernSwitzerland
| | - Florian Kohler
- Section EnvironnementDéveloppement durable et TerritoireDivision Environnement et TerritoireBundesamt für StatistikNeuchâtelSwitzerland
| | - Matti Koivula
- School of Forest SciencesUniversity of Eastern FinlandJoensuuFinland
| | - Annette Kolb
- Institute of Ecology, FB2University of BremenBremenGermany
| | - Mouhamadou Kone
- Université Peleforo Gon CoulibalyKorhogoIvory Coast
- Station d'Ecologie de LamtoN'DouciIvory Coast
| | - Ádám Kőrösi
- MTA‐ELTE‐MTM Ecology Research GroupHungarian Academy of Sciencesc/o Biological InstituteEötvös Lóránd UniversityBudapestHungary
- Theoretical Evolutionary Ecology GroupDepartment of Animal Ecology and Tropical BiologyBiocenterUniversity of WürzburgWürzburgGermany
| | - Jochen Krauss
- Department of Animal Ecology and Tropical BiologyBiocenterUniversity of WürzburgWürzburgGermany
| | - Ajith Kumar
- Wildlife Conservation Society‐IndiaNational Centre for Biological SciencesBangaloreIndia
| | | | - David J. Kurz
- Department of Environmental Science, Policy, and ManagementUniversity of CaliforniaBerkeleyCAUSA
| | - Alex S. Kutt
- School of BioSciencesUniversity of MelbourneMelbourneVic.Australia
| | - Thibault Lachat
- School of Agricultural, Forest and Food Sciences HAFLBern University of Applied SciencesZollikofenSwitzerland
- Swiss Federal Institute for ForestSnow and Landscape Research WSLBirmensdorfSwitzerland
| | - Victoria Lantschner
- Instituto Nacional de Tecnología AgropecuariaEEA BarilocheBarilocheArgentina
| | - Francisco Lara
- Departamento de Biología (Botánica)Facultad de CienciasUniversidad Autonoma de MadridMadridSpain
| | - Jesse R. Lasky
- Department of BiologyPennsylvania State UniversityUniversity ParkPAUSA
| | | | - William F. Laurance
- Centre for Tropical Environmental and Sustainability SciencesCollege of Marine and Environmental ScienceJames Cook UniversityCairnsQldAustralia
| | - Patrick Lavelle
- Université Pierre‐et‐Marie‐CurieParisFrance
- Institute of Ecology and Environmental SciencesParisFrance
| | | | - Gretchen LeBuhn
- Department of BiologySan Francisco State UniversitySan FranciscoCAUSA
| | - Jean‐Philippe Légaré
- Laboratoire de diagnostic en phytoprotectionMinistère de l'agriculture, des pêcheries et de l'alimentation du QuébecVille de QuébecQCCanada
| | - Valérie Lehouck
- Research Unit Terrestrial EcologyGhent UniversityGhentBelgium
| | - María V. Lencinas
- Laboratorio de Recursos AgroforestalesCentro Austral de Investigaciones Científicas (CADIC)Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET)UshuaiaArgentina
| | - Pia E. Lentini
- School of BiosciencesUniversity of MelbourneParkvilleVic.Australia
| | | | - Qi Li
- Institute of Applied EcologyChinese Academy of SciencesShenyangChina
| | - Simon A. Litchwark
- School of Biological SciencesUniversity of CanterburyChristchurchNew Zealand
| | | | - Yunhui Liu
- College of Resources and Environmental SciencesChina Agricultural UniversityBeijingChina
| | | | | | - Mounir Louhaichi
- International Center for Agricultural Research in the Dry Areas (ICARDA)Amman OfficeAmmanJordan
- Animal and Rangeland Sciences DepartmentOregon State UniversityCorvallisORUSA
| | - Gabor L. Lövei
- Department of AgroecologyFlakkebjerg Research CentreAarhus UniversitySlagelseDenmark
| | - Manuel Esteban Lucas‐Borja
- Department of Agroforestry Technology and Science and GeneticsSchool of Advanced Agricultural EngineeringCastilla La Mancha UniversityAlbaceteSpain
| | - Victor H. Luja
- Unidad Académica de TurismoCoordinación de Investigación y PosgradoUniversidad Autónoma de NayaritTepicMexico
| | - Matthew S. Luskin
- Department of Environmental Science, Policy, and ManagementUniversity of CaliforniaBerkeleyCAUSA
| | | | - Kaoru Maeto
- Graduate School of Agricultural ScienceKobe UniversityKobeJapan
| | - Tibor Magura
- Department of EcologyUniversity of DebrecenDebrecenHungary
| | - Neil Aldrin Mallari
- Center for Conservation InnovationSan Jose Tagaytay CityPhilippines
- Biology DepartmentDe La Salle UniversityManilaPhilippines
| | - Louise A. Malone
- The New Zealand Institute for Plant & Food Research LimitedAucklandNew Zealand
| | | | - Jagoba Malumbres‐Olarte
- Center for Macroecology, Evolution and ClimateNatural History Museum of DenmarkUniversity of CopenhagenCopenhagen ØDenmark
| | - Salvador Mandujano
- Red de Biología y Conservación de VertebradosInstituto de Ecología A.C.XalapaMexico
| | | | | | | | | | - Eliana Martínez
- Universidad Nacional de Colombia, Ciudad UniversitariaBogotáColombia
| | - Guillermo Martínez Pastur
- Laboratorio de Recursos AgroforestalesCentro Austral de Investigaciones Científicas (CADIC)Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET)UshuaiaArgentina
| | | | | | - Vicente Mazimpaka
- Departamento de Biología (Botánica)Facultad de CienciasUniversidad Autonoma de MadridMadridSpain
| | | | - Kyle P. McCarthy
- Department of Entomology and Wildlife EcologyUniversity of DelawareNewarkDEUSA
| | | | - Sean McNamara
- Centre for Mined Land RehabilitationThe University of QueenslandBrisbaneQldAustralia
| | - Nagore G. Medina
- Departamento de Biología (Botánica)Facultad de CienciasUniversidad Autonoma de MadridMadridSpain
- Departamento de Biogeografía y Cambio GlobalMuseo Nacional de Ciencias Naturales (CSIC)MadridSpain
| | - Rafael Medina
- Ecology and Evolutionary BiologyUniversity of ConnecticutStorrsCTUSA
| | - Jose L. Mena
- Museo de Historia Natural “Vera Alleman Haeghebaert”Universidad Ricardo PalmaLima 33Peru
| | - Estefania Mico
- Centro Iberoamericano de la Biodiversidad (CIBIO)Universidad de AlicanteAlicanteSpain
| | - Grzegorz Mikusinski
- Department of EcologySwedish University of Agricultural Sciences, Grimsö Wildlife Research StationRiddarhyttanSweden
| | - Jeffrey C. Milder
- Rainforest AllianceNew YorkNYUSA
- Department of Natural ResourcesCornell UniversityIthacaNYUSA
| | - James R. Miller
- Department of Natural Resources & Environmental SciencesUniversity of IllinoisUrbanaILUSA
| | | | - Melinda L. Moir
- School of BiosciencesUniversity of MelbourneParkvilleVic.Australia
- School of Plant BiologyUniversity of Western AustraliaCrawleyWAAustralia
| | - Carolina L. Morales
- Lab. EcotonoINIBIOMA (Universidad Nacional del Comahue‐CONICET)BarilocheArgentina
| | | | - Muchai Muchane
- Department of Wildlife ManagementUniversity of EldoretEldoretKenya
| | - Sonja Mudri‐Stojnic
- Department of Biology and EcologyFaculty of SciencesUniversity of Novi SadNovi SadSerbia
| | - A. Nur Munira
- School of Biological SciencesUniversiti Sains MalaysiaPenangMalaysia
| | - Antonio Muoñz‐Alonso
- El Colegio de la Frontera SurEcología Evolutiva y ConservaciónSan Cristóbal de las CasasMexico
| | | | | | - A. Naithani
- Independent Research ScholarNew DelhiIndia
- Avian Diversity and Bioacoustic LabDepartment of ZoologyGurukula Kangri UniversityHaridwarIndia
| | - Michiko Nakagawa
- Graduate School of Bioagricultural SciencesNagoya UniversityNagoyaJapan
| | - Akihiro Nakamura
- Key Laboratory of Tropical Forest EcologyXishuangbanna Tropical Botanical GardenChinese Academy of SciencesMenglunChina
- Environmental Futures Research Institute, and Griffith School of EnvironmentGriffith UniversityNathanBrisbaneQldAustralia
| | | | - Shoji Naoe
- Forestry and Forest Products Research InstituteTsukubaJapan
| | - Guiomar Nates‐Parra
- Laboratorio de Investigaciones en Abejas (Departamento de Biología)Universidad Nacional de ColombiaBogotáColombia
| | | | | | - Paul K. Ndang'ang'a
- BirdLife International – Africa Partnership SecretariatNairobiKenya
- Ornithology SectionNational Museums of KenyaNairobiKenya
| | - Eike L. Neuschulz
- Senckenberg Biodiversity and Climate Research Centre (BiK‐F)Frankfurt am MainGermany
| | | | - Violaine Nicolas
- Institut de Systématique, Évolution, BiodiversitéISYEB – UMR 7205 – CNRS, MNHN, UPMC, EPHEMuséum national d'Histoire naturelleSorbonne UniversitésParisFrance
| | | | - Norbertas Noreika
- Department of BiosciencesUniversity of HelsinkiHelsinkiFinland
- Department of Environmental SciencesUniversity of HelsinkiHelsinkiFinland
| | - Olivia Norfolk
- School of BiologyThe University of NottinghamUniversity ParkNottinghamUK
| | - Jorge Ari Noriega
- Laboratorio de Zoología y Ecología Acuática – LAZOEAUniversidad de Los AndesBogotáColombia
| | - David A. Norton
- School of ForestryUniversity of CanterburyChristchurchNew Zealand
| | | | - A. Justin Nowakowski
- Department of Wildlife, Fish and Conservation BiologyUniversity of California, DavisDavisCAUSA
| | - Catherine Numa
- IUCN‐Centre for Mediterranean CooperationCampanillas, MálagaSpain
| | - Niall O'Dea
- Oxford University Centre for the EnvironmentUniversity of OxfordOxfordUK
| | - Patrick J. O'Farrell
- Natural Resources and the EnvironmentCSIRStellenboschSouth Africa
- Plant Conservation UnitBiological SciencesUniversity of Cape TownRondeboschSouth Africa
| | - William Oduro
- Wildlife and Range Management DepartmentFaculty of Renewable Natural Resources (FRNR)College of Agriculture and Natural Resources (CANR)Kwame Nkrumah University of Science and Technology (KNUST)KumasiGhana
- International Programme Office (IPO)Vice Chancellor's OfficeKwame Nkrumah University of Science and Technology (KNUST)KumasiGhana
| | - Sabine Oertli
- Naturschutz – Planung und BeratungWiesendangenSwitzerland
| | - Caleb Ofori‐Boateng
- Department of Wildlife and Range ManagementKwame Nkrumah University of Science and TechnologyKumasiGhana
- Forestry Research Institute of GhanaKumasiGhana
| | | | - Vicencio Oostra
- Department of Genetics, Evolution and EnvironmentUniversity College LondonLondonUK
| | | | - Samuel Eduardo Otavo
- Laboratorio de Ecología del PaisajeFacultad de Ciencias ForestalesUniversidad de ConcepciónConcepciónChile
| | | | - Juan Paritsis
- Laboratorio EcotonoCONICET–INIBIOMAUniversidad Nacional del ComahueBarilocheArgentina
| | - Alejandro Parra‐H
- Laboratorio de Investigaciones en AbejasLABUNUniversidad Nacional de ColombiaBogotá D.C.Colombia
| | - Luke Parry
- Lancaster Environment CentreLancaster UniversityLancasterUK
- Universidade Federal do Pará (UFPA)Núcleo de Altos Estudos Amazonicos (NAEA)BelémBrazil
| | - Guy Pe'er
- Department of Community EcologyUFZHelmholtz Centre for Environmental ResearchHalleGermany
- German Centre for Integrative Biodiversity Research (iDiv)Halle‐Jena‐LeipzigLeipzigGermany
| | - Peter B. Pearman
- Department of Plant Biology and EcologyFaculty of Science and TechnologyUniversity of the Basque CountryLeioaSpain
- IKERBASQUE. Basque Foundation for ScienceBilbaoSpain
| | - Nicolás Pelegrin
- Instituto de Diversidad y Ecología Animal (IDEA, CONICET‐UNC) and Centro de Zoología AplicadaFCEFyNUniversidad Nacional de CórdobaCórdobaArgentina
| | - Raphaël Pélissier
- IRDUMR AMAPTA A51/PS2Montpellier cedex 05France
- French Institute of PondicherryUMIFRE 21 CNRS‐MAEEPuducherryIndia
| | - Carlos A. Peres
- School of Environmental SciencesUniversity of East AngliaNorwichUK
| | - Pablo L. Peri
- National Institute of Agricultural Technology (INTA)Río GallegosArgentina
- National University of Southern Patagonia (UNPA)Río GallegosArgentina
- National Commission of Scientist Research and Technology (CONICET)Buenos Aires, Argentina
| | | | - Theodora Petanidou
- Laboratory of Biogeography & EcologyDepartment of GeographyUniversity of the AegeanMytileneGreece
| | - Marcell K. Peters
- Department of Animal Ecology and Tropical BiologyBiocenterUniversity of WürzburgWürzburgGermany
| | | | - Ben Phalan
- Conservation Science GroupDepartment of ZoologyUniversity of CambridgeCambridgeUK
| | - T. Keith Philips
- Systematics and Evolution LaboratoryDepartment of BiologyWestern Kentucky UniversityBowling GreenKYUSA
| | - Finn C. Pillsbury
- Department of Natural Resource Ecology and ManagementIowa State UniversityAmesIAUSA
| | - Jimmy Pincheira‐Ulbrich
- Departamento de ZoologíaFacultad de Ciencias Naturales y OceanográficasUniversidad de ConcepciónConcepciónChile
- Facultad de Recursos NaturalesEscuela de Ciencias AmbientalesLaboratorio de Planificación TerritorialUniversidad Católica de TemucoTemucoChile
| | - Eduardo Pineda
- Biología y Conservación de VertebradosInstituto de Ecología A.C.El Haya, XalapaMexico
| | - Joan Pino
- CREAFCerdanyola del Vallès, CataloniaSpain
- Universitat Autònoma de BarcelonaCerdanyola del VallèsSpain
| | - Jaime Pizarro‐Araya
- Laboratorio de Entomología EcológicaDepartamento de BiologíaFacultad de CienciasUniversidad de La SerenaLa SerenaChile
| | - A. J. Plumptre
- Albertine Rift ProgramWildlife Conservation SocietyKampalaUganda
| | - Santiago L. Poggio
- IFEVA/Cátedra de Producción VegetalDepartamento de Producción VegetalFacultad de AgronomíaUniversidad de Buenos Aires/CONICET.Buenos AiresArgentina
| | - Natalia Politi
- Directora del Programa Conservación de Biodiversidad en Bosques SubtropicalesCátedra de Desarrollo Sustentable y BiodiversidadFacultad de Ciencias AgrariasUniversidad Nacional de JujuyCIT‐Jujuy CONICET, Fundaciòn CEBioSan Salvador de Jujuy, Argentina
| | - Pere Pons
- Departament de Ciències AmbientalsUniversitat de GironaGironaSpain
| | | | - Eileen F. Power
- BotanySchool of Natural SciencesTrinity College DublinDublin 2Ireland
| | - Steven J. Presley
- Center for Environmental Sciences and Engineering & Department of Ecology and Evolutionary BiologyUniversity of ConnecticutStorrsCTUSA
| | - Vânia Proença
- MARETEC, Instituto Superior TécnicoUniversidade de LisboaLisbonPortugal
| | - Marino Quaranta
- CREA‐ABP, Consiglio per la ricerca in agricoltura e l'analisi dell'economia agraria, Centro di ricerca per l'agrobiologia e la pedologiaFirenzeItaly
| | - Carolina Quintero
- Laboratorio EcotonoCONICET–INIBIOMAUniversidad Nacional del ComahueBarilocheArgentina
| | - Romina Rader
- Ecosystem Management, School of Environment and Rural ScienceUniversity of New EnglandArmidaleNSWAustralia
| | - B. R. Ramesh
- French Institute of PondicherryUMIFRE 21 CNRS‐MAEEPuducherryIndia
| | | | - Jai Ranganathan
- National Center for Ecological Analysis and SynthesisUniversity of California, Santa BarbaraSanta BarbaraCAUSA
| | | | | | - J. Leighton Reid
- Center for Conservation and Sustainable DevelopmentMissouri Botanical GardenSaint LouisMOUSA
| | - Yana T. Reis
- Departamento de BiologiaUniversidade Federal de SergipeSão Cristóvão/SeBrazil
| | | | - Juan Carlos Rey‐Velasco
- Entomology Colletion, Systematics and Biogeography LaboratorySchool of BiologyIndustrial University of SantanderBucaramangaColombia
| | - Chevonne Reynolds
- Percy FitzPatrick Institute of African OrnithologyDST/NRF Centre of ExcellenceUniversity of Cape TownRondeboschCape TownSouth Africa
- School of Animal, Plant and Environmental SciencesUniversity of the WitwatersrandWitsSouth Africa
| | - Danilo Bandini Ribeiro
- Centro de Ciências Biológicas e da SaúdeUniversidade Federal de Mato Grosso do SulCampo GrandeBrazil
| | | | - Barbara A. Richardson
- EdinburghUK
- Luquillo LTER, Institute for Tropical Ecosystem Studies, College of Natural SciencesUniversity of Puerto Rico at Rio PiedrasSan JuanPRUSA
| | - Michael J. Richardson
- EdinburghUK
- Luquillo LTER, Institute for Tropical Ecosystem Studies, College of Natural SciencesUniversity of Puerto Rico at Rio PiedrasSan JuanPRUSA
| | - Rodrigo Macip Ríos
- Escuela Nacional de Estudios SuperioresUniversidad Nacional Autónoma de MéxicoMoreliaMexico
| | - Richard Robinson
- Science and Conservation DivisionDepartment of Parks and WildlifeManjimupWAAustralia
| | - Carolina A. Robles
- PROPLAME‐PRHIDEB‐CONICETDepartamento de Biodiversidad y Biología ExperimentalFacultad de Ciencias Exactas y NaturalesUniversidad de Buenos Aires, Ciudad Universitaria(CP1428EHA) Ciudad Autónoma de Buenos AiresArgentina
| | - Jörg Römbke
- ECT Oekotoxikologie GmbHFlörsheim am MainGermany
- LOEWE Biodiversity and Climate Research Centre BiK‐FFrankfurt/MainGermany
| | - Luz Piedad Romero‐Duque
- Facultad de Ciencias AmbientalesUniversidad de Ciencias Aplicadas y Ambientales U.D.C.ABogotáColombia
| | - Matthias Rös
- Catedras CONACYTCIIDIR, Unidad Oaxaca, IPNSanta Cruz Xoxocotlán, Mexico
| | - Loreta Rosselli
- Universidad de Ciencias Aplicadas y Ambientales U.D.C.A.BogotáColombia
| | - Stephen J. Rossiter
- School of Biological and Chemical SciencesQueen Mary University of LondonLondonUK
| | - Dana S. Roth
- School of Natural Resources and EnvironmentUniversity of MichiganAnn ArborMIUSA
| | - T'ai H. Roulston
- Department of Environmental SciencesUniversity of VirginiaCharlottesvilleVAUSA
- Blandy Experimental FarmBoyceVAUSA
| | - Laurent Rousseau
- Département des sciences biologiques (SB)Universitédu Québec à Montréal (UQÀM)MontréalQCCanada
| | | | | | - Jonathan P. Sadler
- School of Geography, Earth and Environmental SciencesUniversity of BirminghamBirminghamUK
| | - Szabolcs Sáfián
- Institute of Silviculture and Forest ProtectionUniversity of West HungarySopronHungary
| | - Romeo A. Saldaña‐Vázquez
- Red de Ecología FuncionalInstituto de Ecología A.C. Carretera antigua a CoatepecEl Haya, XalapaMexico
| | - Katerina Sam
- Environmental Futures Research InstituteGriffith UniversityBrisbaneQldAustralia
- Biology Centre CASInstitute of EntomologyCeske BudejoviceCzech Republic
- Faculty of ScienceUniversity of South BohemiaCeske BudejoviceCzech Republic
| | - Ulrika Samnegård
- Department of Ecology, Environment and Plant SciencesStockholm UniversityStockholmSweden
- Department of Biology/BiodiversityLund UniversityLundSweden
| | - Joana Santana
- CIBIO/InBioCentro de Investigação em Biodiversidade e Recursos GenéticosUniversidade do PortoVairãoPortugal
| | - Xavier Santos
- CIBIO/InBioCentro de Investigação em Biodiversidade e Recursos GenéticosUniversidade do PortoVairãoPortugal
| | | | | | - Menno Schilthuizen
- Naturalis Biodiversity CenterCR LeidenThe Netherlands
- Institute for Tropical Biology and ConservationUniversiti Malaysia Sabah, Jalan UMSKota KinabaluMalaysia
| | - Ute Schmiedel
- Biocentre Klein Flottbek & Botanical GardenUniversity of HamburgHamburgGermany
| | - Christine B. Schmitt
- Center for Development Research (ZEF)University of BonnBonnGermany
- Chair for Landscape ManagementUniversity of FreiburgFreiburgGermany
| | - Nicole L. Schon
- AgResearch LimitedLincoln Research CentreChristchurchNew Zealand
| | - Christof Schüepp
- Institute of Ecology and EvolutionUniversity of BernBernSwitzerland
| | - Katharina Schumann
- Institute for Ecology, Evolution and DiversityGoethe University FrankfurtFrankfurt am MainGermany
| | - Oliver Schweiger
- Department of Community EcologyUFZHelmholtz Centre for Environmental ResearchHalleGermany
| | - Dawn M. Scott
- Biology and Biomedical Sciences DivisionUniversity of BrightonBrightonUK
| | | | | | - Steven S. Seefeldt
- School of Natural Resources and ExtensionUniversity of Alaska FairbanksFairbanksAKUSA
| | | | - Graeme Shannon
- College of Natural SciencesBangor UniversityBangor, GwyneddUK
- School of Life SciencesUniversity of KwaZulu‐NatalDurbanSouth Africa
| | - Douglas Sheil
- Department of Ecology and Natural Resource Management (INA)Norwegian University of Life Sciences (NMBU)ÅsNorway
| | - Frederick H. Sheldon
- Museum of Natural Science and Department of Biological SciencesLouisiana State UniversityBaton RougeLAUSA
- Baton RougeLAUSA
| | - Eyal Shochat
- Department of Life SciencesBen‐Gurion University of the NegevBe'er ShevaIsrael
- The Yerucham Center of Ornithology and EcologyYeruchamIsrael
| | - Stefan J. Siebert
- Unit for Environmental Sciences and ManagementNorth‐West UniversityPotchefstroomSouth Africa
| | | | | | | | - Jo Smith
- Organic Research CentreElm FarmNewburyUK
| | - Allan H. Smith‐Pardo
- United States Department of AgricultureSouth San FranciscoCAUSA
- Universidad Nacional de ColombiaSede MedellinMedellinColombia
| | - Navjot S. Sodhi
- Department of Biological SciencesNational University of SingaporeSingaporeSingapore
| | - Eduardo J. Somarriba
- Centro Agronómico Tropical de Investigación y Enseñanza (CATIE)Tropical Agricultural Research and Higher Education CenterTurrialbaCosta Rica
| | - Ramón A. Sosa
- Ecología de Comunidades Ãridas y Semiaridas (EComAS)Departamento de RecursosFacultad de Ciencias Exactas y NaturalesUNLPam.Santa rosaLa PampaUruguay
| | - Grimaldo Soto Quiroga
- Centro Agronómico Tropical de Investigación y Enseñanza (CATIE)Tropical Agricultural Research and Higher Education CenterTurrialbaCosta Rica
- Gobierno Autónomo Departamental Santa CruzSanta Cruz de la SierraBolivia
| | - Martin‐Hugues St‐Laurent
- Université du Québec à RimouskiCentre for Northern Research, Centre for Forest StudiesRimouskiQCCanada
| | | | - Constanti Stefanescu
- CREAFCerdanyola del Vallès, CataloniaSpain
- Universitat Autònoma de BarcelonaCerdanyola del VallèsSpain
- Museu de Ciències Naturals de GranollersGranollersBarcelonaSpain
| | - Ingolf Steffan‐Dewenter
- Department of Animal Ecology and Tropical BiologyBiocenterUniversity of WürzburgWürzburgGermany
| | - Philip C. Stouffer
- School of Renewable Natural ResourcesLouisiana State University Agricultural CenterBaton RougeLAUSA
- Biological Dynamics of Forest Fragments ProjectInstituto Nacional de Pesquisas da AmazôniaManausBrazil
| | - Jane C. Stout
- BotanySchool of Natural SciencesTrinity College DublinDublin 2Ireland
| | - Ayron M. Strauch
- Department of Natural Resources and Environmental ManagementUniversity of HawaiiManoaHonoluluHIUSA
| | - Matthew J. Struebig
- Durrell Institute of Conservation and Ecology (DICE)School of Anthropology and ConservationUniversity of KentCanterburyUK
| | - Zhimin Su
- Key Laboratory of Zoological Systematics and EvolutionInstitute of ZoologyChinese Academy of SciencesChaoyang DistrictBeijingChina
- State Key Laboratory of Urban and Regional EcologyResearch Center for Eco‐Environmental SciencesChinese Academy of SciencesHaidian DistrictBeijingChina
| | - Marcela Suarez‐Rubio
- Institute of ZoologyUniversity of Natural Resources and Life SciencesViennaAustria
| | - Shinji Sugiura
- Graduate School of Agricultural ScienceKobe UniversityKobeJapan
| | | | - Yik‐Hei Sung
- Department of BiologyHong Kong Baptist UniversityKowloon Tong, Hong Kong SARChina
| | - Hari Sutrisno
- Zoological DivisionResearch Center For BiologyThe Indonesian Institute of SciencesCibinongBogorIndonesia
| | - Jens‐Christian Svenning
- Section for Ecoinformatics & BiodiversityDepartment of BioscienceAarhus UniversityAarhus CDenmark
| | - Tiit Teder
- Department of Zoology, Institute of Ecology and Earth SciencesUniversity of TartuTartuEstonia
| | - Caragh G. Threlfall
- School of Ecosystem and Forest Science, Faculty of ScienceThe University of MelbourneRichmondVic.Australia
| | - Anu Tiitsaar
- Department of Zoology, Institute of Ecology and Earth SciencesUniversity of TartuTartuEstonia
| | - Jacqui H. Todd
- The New Zealand Institute for Plant & Food Research LimitedAucklandNew Zealand
| | | | - Ignasi Torre
- Museu de Ciències Naturals de GranollersGranollersBarcelonaSpain
| | - Béla Tóthmérész
- MTA‐DE Biodiversity and Ecosystem Services Research GroupDebrecenHungary
| | - Teja Tscharntke
- AgroecologyDepartment of Crop SciencesGeorg‐August UniversityGöttingenGermany
| | - Edgar C. Turner
- Insect Ecology GroupDepartment of ZoologyUniversity of CambridgeCambridgeUK
| | - Jason M. Tylianakis
- Department of Life SciencesImperial College LondonAscotUK
- Centre for Integrative Ecology, School of Biological SciencesUniversity of CanterburyChristchurchNew Zealand
| | | | - Nicolas Urbina‐Cardona
- Department of Ecology and TerritorySchool of Environmental and Rural StudiesPontificia Universidad JaverianaBogotaColombia
| | - Denis Vallan
- Naturhistorisches Museum BaselLeiter BiowissenschaftenBaselSwitzerland
| | | | | | - Kiril Vassilev
- Institute of Biodiversity and Ecosystem ResearchBulgarian Academy of ScienceSofiaBulgaria
| | - Hans A. F. Verboven
- Division Forest, Nature, and LandscapeDepartment of Earth & Environmental SciencesKU LeuvenLeuvenBelgium
| | - Maria João Verdasca
- Museu Nacional de História Natural e da CiênciaBorboletário – Depart. ZoologiaLisboaPortugal
| | - José R. Verdú
- Centro Iberoamericano de la Biodiversidad (CIBIO)Universidad de AlicanteAlicanteSpain
| | - Carlos H. Vergara
- Departamento de Ciencias Químico‐BiológicasUniversidad de las Américas PueblaCholulaMexico
| | - Pablo M. Vergara
- Departamento de Gestión AgrariaUniversidad de Santiago de ChileSantiagoChile
| | | | | | - Lien Van Vu
- Vietnam National Museum of NatureVietnam Academy of Science and TechnologyCau GiayHanoiVietnam
| | | | - Tony R. Walker
- School of BiologyThe University of NottinghamUniversity ParkNottinghamUK
- School for Resource and Environmental StudiesFaculty of ManagementDalhousie UniversityHalifaxNSCanada
| | - Hua‐Feng Wang
- Key Laboratory of Protection and Development Utilization of Tropical Crop Germplasm Resource, Ministry of Education, College of Horticulture and Landscape AgricultureHainan UniversityHaikouChina
| | - Yanping Wang
- College of Life SciencesZhejiang UniversityHangzhouChina
| | - James I. Watling
- Department of BiologyJohn Carroll UniversityUniversity HeightsOHUSA
| | - Britta Weller
- Biocentre GrindelUniversity of HamburgHamburgGermany
| | - Konstans Wells
- The Environment Institute and School of Earth and Environmental SciencesThe University of AdelaideAdelaideSAAustralia
- Environmental Futures Research InstituteGriffith UniversityBrisbaneQldAustralia
| | - Catrin Westphal
- AgroecologyDepartment of Crop SciencesGeorg‐August UniversityGöttingenGermany
| | - Edward D. Wiafe
- Department of Environmental and Natural ResourcesPresbyterian University CollegeAkropong AkuapemGhana
| | | | - Michael R. Willig
- Center for Environmental Sciences & EngineeringUniversity of ConnecticutStorrsCTUSA
- Department of Ecology & Evolutionary BiologyUniversity of ConnecticutStorrsCTUSA
| | | | - Jan H. D. Wolf
- Institute for Biodiversity and Ecosystem Dynamics (IBED)University of AmsterdamGE AmsterdamThe Netherlands
| | - Volkmar Wolters
- Department of Animal EcologyJustus‐Liebig‐UniversityGiessenGermany
| | - Ben A. Woodcock
- NERC Centre for Ecology & HydrologyCrowmarsh GiffordWallingfordUK
| | - Jihua Wu
- Institute of Biodiversity Science, School of Life SciencesFudan UniversityShanghaiChina
| | - Joseph M. Wunderle
- International Institute of Tropical ForestryUSDA Forest Service, Sabana Field Research StationLuquilloPRUSA
| | - Yuichi Yamaura
- Forestry and Forest Products Research InstituteTsukubaJapan
| | | | - Douglas W. Yu
- School of Biological SciencesUniversity of East AngliaNorwich Research ParkNorwichUK
- State Key Laboratory of Genetic Resources and Evolution, Kunming Institute of ZoologyChinese Academy of SciencesKunmingChina
| | - Andrey S. Zaitsev
- Department of Animal EcologyJustus‐Liebig‐UniversityGiessenGermany
- A. N. Severtsov Institute of Ecology and EvolutionMoscowRussia
| | - Juliane Zeidler
- Integrated Environmental Consultants Namibia (IECN)WindhoekNamibia
| | - Fasheng Zou
- Guangdong Entomological Institute/South China Institute of Endangered AnimalsGuangzhouChina
| | - Ben Collen
- Department of Genetics, Evolution and EnvironmentCentre for Biodiversity and EnvironmentResearchUniversity College LondonLondonUK
| | - Rob M. Ewers
- Department of Life SciencesImperial College LondonAscotUK
| | - Georgina M. Mace
- Department of Genetics, Evolution and EnvironmentCentre for Biodiversity and EnvironmentResearchUniversity College LondonLondonUK
| | - Drew W. Purves
- Computational Ecology and Environmental ScienceMicrosoft ResearchCambridgeUK
| | - Jörn P. W. Scharlemann
- United Nations Environment Programme World Conservation Monitoring CentreCambridgeUK
- School of Life SciencesUniversity of SussexBrightonUK
| | - Andy Purvis
- Department of Life SciencesNatural History MuseumLondonUK
- Department of Life SciencesImperial College LondonAscotUK
| |
Collapse
|
11
|
Bueker B, Eberlein C, Gladieux P, Schaefer A, Snirc A, Bennett DJ, Begerow D, Hood ME, Giraud T. Distribution and population structure of the anther smut Microbotryum silenes-acaulis parasitizing an arctic-alpine plant. Mol Ecol 2016; 25:811-24. [PMID: 26671732 DOI: 10.1111/mec.13512] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/08/2015] [Revised: 11/02/2015] [Accepted: 11/26/2015] [Indexed: 12/18/2022]
Abstract
Cold-adapted organisms with current arctic-alpine distributions have persisted during the last glaciation in multiple ice-free refugia, leaving footprints in their population structure that contrast with temperate plants and animals. However, pathogens that live within hosts having arctic-alpine distributions have been little studied. Here, we therefore investigated the geographical range and population structure of a fungus parasitizing an arctic-alpine plant. A total of 1437 herbarium specimens of the plant Silene acaulis were examined, and the anther smut pathogen Microbotryum silenes-acaulis was present throughout the host's geographical range. There was significantly greater incidence of anther smut disease in more northern latitudes and where the host locations were less dense, indicating a major influence of environmental factors and/or host demographic structure on the pathogen distribution. Genetic analyses with seven microsatellite markers on recent collections of 195 M. silenes-acaulis individuals revealed three main genetic clusters, in North America, northern Europe and southern Europe, likely corresponding to differentiation in distinct refugia during the last glaciation. The lower genetic diversity in northern Europe indicates postglacial recolonization northwards from southern refugia. This study combining herbarium surveys and population genetics thus uniquely reveals the effects of climate and environmental factors on a plant pathogen species with an arctic-alpine distribution.
Collapse
Affiliation(s)
- Britta Bueker
- Lehrstuhl für Evolution und Biodiversität der Pflanzen, AG Geobotanik, Ruhr-Universität Bochum, Universitätsstraße 150, 44780, Bochum, Germany.,Department of Biology, Amherst College, 220 South Pleasant Street, Amherst, MA, 01002, USA
| | - Chris Eberlein
- Lehrstuhl für Evolution und Biodiversität der Pflanzen, AG Geobotanik, Ruhr-Universität Bochum, Universitätsstraße 150, 44780, Bochum, Germany.,Institut de Biologie Intégrative et des Systèmes, Département de Biologie, PROTEO, Université Laval, Pavillon Charles-Eugène-Marchand, 1030 Avenue de la Médicine, Quebec City, Quebec, Canada, G1V 0A6
| | - Pierre Gladieux
- Ecologie Systématique Evolution, CNRS, Univ. Paris-Sud, AgroParisTech, Université Paris-Saclay, 91400, Orsay, France.,INRA, UMR BGPI, Bâtiment K, Campus International de Baillarguet, F-34398, Montpellier, France.,CIRAD, F-34398, Montpellier, France
| | - Angela Schaefer
- Lehrstuhl für Evolution und Biodiversität der Pflanzen, AG Geobotanik, Ruhr-Universität Bochum, Universitätsstraße 150, 44780, Bochum, Germany
| | - Alodie Snirc
- Ecologie Systématique Evolution, CNRS, Univ. Paris-Sud, AgroParisTech, Université Paris-Saclay, 91400, Orsay, France
| | - Dominic J Bennett
- Ecologie Systématique Evolution, CNRS, Univ. Paris-Sud, AgroParisTech, Université Paris-Saclay, 91400, Orsay, France.,Department of Life Sciences, Imperial College London, London, SW7 2AZ, UK
| | - Dominik Begerow
- Lehrstuhl für Evolution und Biodiversität der Pflanzen, AG Geobotanik, Ruhr-Universität Bochum, Universitätsstraße 150, 44780, Bochum, Germany
| | - Michael E Hood
- Department of Biology, Amherst College, 220 South Pleasant Street, Amherst, MA, 01002, USA
| | - Tatiana Giraud
- Ecologie Systématique Evolution, CNRS, Univ. Paris-Sud, AgroParisTech, Université Paris-Saclay, 91400, Orsay, France
| |
Collapse
|
12
|
Newbold T, Hudson LN, Hill SLL, Contu S, Lysenko I, Senior RA, Börger L, Bennett DJ, Choimes A, Collen B, Day J, De Palma A, Díaz S, Echeverria-Londoño S, Edgar MJ, Feldman A, Garon M, Harrison MLK, Alhusseini T, Ingram DJ, Itescu Y, Kattge J, Kemp V, Kirkpatrick L, Kleyer M, Correia DLP, Martin CD, Meiri S, Novosolov M, Pan Y, Phillips HRP, Purves DW, Robinson A, Simpson J, Tuck SL, Weiher E, White HJ, Ewers RM, Mace GM, Scharlemann JPW, Purvis A. Global effects of land use on local terrestrial biodiversity. Nature 2015; 520:45-50. [PMID: 25832402 DOI: 10.1038/nature14324] [Citation(s) in RCA: 1256] [Impact Index Per Article: 139.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/09/2014] [Accepted: 02/12/2015] [Indexed: 11/09/2022]
Abstract
Human activities, especially conversion and degradation of habitats, are causing global biodiversity declines. How local ecological assemblages are responding is less clear--a concern given their importance for many ecosystem functions and services. We analysed a terrestrial assemblage database of unprecedented geographic and taxonomic coverage to quantify local biodiversity responses to land use and related changes. Here we show that in the worst-affected habitats, these pressures reduce within-sample species richness by an average of 76.5%, total abundance by 39.5% and rarefaction-based richness by 40.3%. We estimate that, globally, these pressures have already slightly reduced average within-sample richness (by 13.6%), total abundance (10.7%) and rarefaction-based richness (8.1%), with changes showing marked spatial variation. Rapid further losses are predicted under a business-as-usual land-use scenario; within-sample richness is projected to fall by a further 3.4% globally by 2100, with losses concentrated in biodiverse but economically poor countries. Strong mitigation can deliver much more positive biodiversity changes (up to a 1.9% average increase) that are less strongly related to countries' socioeconomic status.
Collapse
Affiliation(s)
- Tim Newbold
- 1] United Nations Environment Programme World Conservation Monitoring Centre, 219 Huntingdon Road, Cambridge CB3 0DL, UK. [2] Computational Science Laboratory, Microsoft Research Cambridge, 21 Station Road, Cambridge CB1 2FB, UK
| | - Lawrence N Hudson
- Department of Life Sciences, Natural History Museum, Cromwell Road, London SW7 5BD, UK
| | - Samantha L L Hill
- 1] United Nations Environment Programme World Conservation Monitoring Centre, 219 Huntingdon Road, Cambridge CB3 0DL, UK. [2] Department of Life Sciences, Natural History Museum, Cromwell Road, London SW7 5BD, UK
| | - Sara Contu
- Department of Life Sciences, Natural History Museum, Cromwell Road, London SW7 5BD, UK
| | - Igor Lysenko
- Department of Life Sciences, Imperial College London, Silwood Park, London SL5 7PY, UK
| | - Rebecca A Senior
- United Nations Environment Programme World Conservation Monitoring Centre, 219 Huntingdon Road, Cambridge CB3 0DL, UK
| | - Luca Börger
- Department of Biosciences, College of Science, Swansea University, Singleton Park, Swansea SA2 8PP, UK
| | - Dominic J Bennett
- Department of Life Sciences, Imperial College London, Silwood Park, London SL5 7PY, UK
| | - Argyrios Choimes
- 1] Department of Life Sciences, Natural History Museum, Cromwell Road, London SW7 5BD, UK. [2] Department of Life Sciences, Imperial College London, Silwood Park, London SL5 7PY, UK
| | - Ben Collen
- Department of Genetics, Evolution and Environment, Centre for Biodiversity and Environment Research, University College London, Gower Street, London WC1E 6BT, UK
| | - Julie Day
- Department of Life Sciences, Imperial College London, Silwood Park, London SL5 7PY, UK
| | - Adriana De Palma
- 1] Department of Life Sciences, Natural History Museum, Cromwell Road, London SW7 5BD, UK. [2] Department of Life Sciences, Imperial College London, Silwood Park, London SL5 7PY, UK
| | - Sandra Díaz
- Instituto Multidisciplinario de Biología Vegetal (CONICET-UNC) and FCEFyN, Universidad Nacional de Córdoba, Casilla de Correo 495, 5000 Córdoba, Argentina
| | | | - Melanie J Edgar
- Department of Life Sciences, Natural History Museum, Cromwell Road, London SW7 5BD, UK
| | - Anat Feldman
- Deptartment of Zoology, Faculty of Life Sciences, Tel-Aviv University, 6997801 Tel Aviv, Israel
| | - Morgan Garon
- Department of Life Sciences, Imperial College London, Silwood Park, London SL5 7PY, UK
| | - Michelle L K Harrison
- Department of Life Sciences, Imperial College London, Silwood Park, London SL5 7PY, UK
| | - Tamera Alhusseini
- Department of Life Sciences, Imperial College London, Silwood Park, London SL5 7PY, UK
| | - Daniel J Ingram
- Department of Life Sciences, Imperial College London, Silwood Park, London SL5 7PY, UK
| | - Yuval Itescu
- Deptartment of Zoology, Faculty of Life Sciences, Tel-Aviv University, 6997801 Tel Aviv, Israel
| | - Jens Kattge
- 1] Max Planck Institute for Biogeochemistry, Hans Knöll Straße 10, 07743 Jena, Germany. [2] German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Deutscher Platz 5e, 04103 Leipzig, Germany
| | - Victoria Kemp
- Department of Life Sciences, Imperial College London, Silwood Park, London SL5 7PY, UK
| | - Lucinda Kirkpatrick
- Department of Life Sciences, Imperial College London, Silwood Park, London SL5 7PY, UK
| | - Michael Kleyer
- Landscape Ecology Group, Institute of Biology and Environmental Sciences, University of Oldenburg, D-26111 Oldenburg, Germany
| | | | - Callum D Martin
- Department of Life Sciences, Imperial College London, Silwood Park, London SL5 7PY, UK
| | - Shai Meiri
- Deptartment of Zoology, Faculty of Life Sciences, Tel-Aviv University, 6997801 Tel Aviv, Israel
| | - Maria Novosolov
- Deptartment of Zoology, Faculty of Life Sciences, Tel-Aviv University, 6997801 Tel Aviv, Israel
| | - Yuan Pan
- Department of Life Sciences, Imperial College London, Silwood Park, London SL5 7PY, UK
| | - Helen R P Phillips
- 1] Department of Life Sciences, Natural History Museum, Cromwell Road, London SW7 5BD, UK. [2] Department of Life Sciences, Imperial College London, Silwood Park, London SL5 7PY, UK
| | - Drew W Purves
- Computational Science Laboratory, Microsoft Research Cambridge, 21 Station Road, Cambridge CB1 2FB, UK
| | - Alexandra Robinson
- Department of Life Sciences, Imperial College London, Silwood Park, London SL5 7PY, UK
| | - Jake Simpson
- Department of Life Sciences, Imperial College London, Silwood Park, London SL5 7PY, UK
| | - Sean L Tuck
- Department of Plant Sciences, University of Oxford, Oxford OX1 3RB, UK
| | - Evan Weiher
- Biology Department, University of Wisconsin-Eau Claire, Eau Claire, Wisconsin 54701, USA
| | - Hannah J White
- Department of Life Sciences, Imperial College London, Silwood Park, London SL5 7PY, UK
| | - Robert M Ewers
- Department of Life Sciences, Imperial College London, Silwood Park, London SL5 7PY, UK
| | - Georgina M Mace
- Department of Genetics, Evolution and Environment, Centre for Biodiversity and Environment Research, University College London, Gower Street, London WC1E 6BT, UK
| | - Jörn P W Scharlemann
- 1] United Nations Environment Programme World Conservation Monitoring Centre, 219 Huntingdon Road, Cambridge CB3 0DL, UK. [2] School of Life Sciences, University of Sussex, Brighton BN1 9QG, UK
| | - Andy Purvis
- 1] Department of Life Sciences, Natural History Museum, Cromwell Road, London SW7 5BD, UK. [2] Department of Life Sciences, Imperial College London, Silwood Park, London SL5 7PY, UK
| |
Collapse
|
13
|
Hudson LN, Newbold T, Contu S, Hill SLL, Lysenko I, De Palma A, Phillips HRP, Senior RA, Bennett DJ, Booth H, Choimes A, Correia DLP, Day J, Echeverría-Londoño S, Garon M, Harrison MLK, Ingram DJ, Jung M, Kemp V, Kirkpatrick L, Martin CD, Pan Y, White HJ, Aben J, Abrahamczyk S, Adum GB, Aguilar-Barquero V, Aizen MA, Ancrenaz M, Arbeláez-Cortés E, Armbrecht I, Azhar B, Azpiroz AB, Baeten L, Báldi A, Banks JE, Barlow J, Batáry P, Bates AJ, Bayne EM, Beja P, Berg Å, Berry NJ, Bicknell JE, Bihn JH, Böhning-Gaese K, Boekhout T, Boutin C, Bouyer J, Brearley FQ, Brito I, Brunet J, Buczkowski G, Buscardo E, Cabra-García J, Calviño-Cancela M, Cameron SA, Cancello EM, Carrijo TF, Carvalho AL, Castro H, Castro-Luna AA, Cerda R, Cerezo A, Chauvat M, Clarke FM, Cleary DFR, Connop SP, D'Aniello B, da Silva PG, Darvill B, Dauber J, Dejean A, Diekötter T, Dominguez-Haydar Y, Dormann CF, Dumont B, Dures SG, Dynesius M, Edenius L, Elek Z, Entling MH, Farwig N, Fayle TM, Felicioli A, Felton AM, Ficetola GF, Filgueiras BKC, Fonte SJ, Fraser LH, Fukuda D, Furlani D, Ganzhorn JU, Garden JG, Gheler-Costa C, Giordani P, Giordano S, Gottschalk MS, Goulson D, Gove AD, Grogan J, Hanley ME, Hanson T, Hashim NR, Hawes JE, Hébert C, Helden AJ, Henden JA, Hernández L, Herzog F, Higuera-Diaz D, Hilje B, Horgan FG, Horváth R, Hylander K, Isaacs-Cubides P, Ishitani M, Jacobs CT, Jaramillo VJ, Jauker B, Jonsell M, Jung TS, Kapoor V, Kati V, Katovai E, Kessler M, Knop E, Kolb A, Kőrösi Á, Lachat T, Lantschner V, Le Féon V, LeBuhn G, Légaré JP, Letcher SG, Littlewood NA, López-Quintero CA, Louhaichi M, Lövei GL, Lucas-Borja ME, Luja VH, Maeto K, Magura T, Mallari NA, Marin-Spiotta E, Marshall EJP, Martínez E, Mayfield MM, Mikusinski G, Milder JC, Miller JR, Morales CL, Muchane MN, Muchane M, Naidoo R, Nakamura A, Naoe S, Nates-Parra G, Navarrete Gutierrez DA, Neuschulz EL, Noreika N, Norfolk O, Noriega JA, Nöske NM, O'Dea N, Oduro W, Ofori-Boateng C, Oke CO, Osgathorpe LM, Paritsis J, Parra-H A, Pelegrin N, Peres CA, Persson AS, Petanidou T, Phalan B, Philips TK, Poveda K, Power EF, Presley SJ, Proença V, Quaranta M, Quintero C, Redpath-Downing NA, Reid JL, Reis YT, Ribeiro DB, Richardson BA, Richardson MJ, Robles CA, Römbke J, Romero-Duque LP, Rosselli L, Rossiter SJ, Roulston TH, Rousseau L, Sadler JP, Sáfián S, Saldaña-Vázquez RA, Samnegård U, Schüepp C, Schweiger O, Sedlock JL, Shahabuddin G, Sheil D, Silva FAB, Slade EM, Smith-Pardo AH, Sodhi NS, Somarriba EJ, Sosa RA, Stout JC, Struebig MJ, Sung YH, Threlfall CG, Tonietto R, Tóthmérész B, Tscharntke T, Turner EC, Tylianakis JM, Vanbergen AJ, Vassilev K, Verboven HAF, Vergara CH, Vergara PM, Verhulst J, Walker TR, Wang Y, Watling JI, Wells K, Williams CD, Willig MR, Woinarski JCZ, Wolf JHD, Woodcock BA, Yu DW, Zaitsev AS, Collen B, Ewers RM, Mace GM, Purves DW, Scharlemann JPW, Purvis A. The PREDICTS database: a global database of how local terrestrial biodiversity responds to human impacts. Ecol Evol 2014; 4:4701-35. [PMID: 25558364 PMCID: PMC4278822 DOI: 10.1002/ece3.1303] [Citation(s) in RCA: 106] [Impact Index Per Article: 10.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/11/2014] [Revised: 09/30/2014] [Accepted: 09/30/2014] [Indexed: 11/25/2022] Open
Abstract
Biodiversity continues to decline in the face of increasing anthropogenic pressures such as habitat destruction, exploitation, pollution and introduction of alien species. Existing global databases of species’ threat status or population time series are dominated by charismatic species. The collation of datasets with broad taxonomic and biogeographic extents, and that support computation of a range of biodiversity indicators, is necessary to enable better understanding of historical declines and to project – and avert – future declines. We describe and assess a new database of more than 1.6 million samples from 78 countries representing over 28,000 species, collated from existing spatial comparisons of local-scale biodiversity exposed to different intensities and types of anthropogenic pressures, from terrestrial sites around the world. The database contains measurements taken in 208 (of 814) ecoregions, 13 (of 14) biomes, 25 (of 35) biodiversity hotspots and 16 (of 17) megadiverse countries. The database contains more than 1% of the total number of all species described, and more than 1% of the described species within many taxonomic groups – including flowering plants, gymnosperms, birds, mammals, reptiles, amphibians, beetles, lepidopterans and hymenopterans. The dataset, which is still being added to, is therefore already considerably larger and more representative than those used by previous quantitative models of biodiversity trends and responses. The database is being assembled as part of the PREDICTS project (Projecting Responses of Ecological Diversity In Changing Terrestrial Systems – http://www.predicts.org.uk). We make site-level summary data available alongside this article. The full database will be publicly available in 2015.
Collapse
Affiliation(s)
- Lawrence N Hudson
- Department of Life Sciences, Natural History Museum Cromwell Road, London, SW7 5BD, U.K
| | - Tim Newbold
- United Nations Environment Programme World Conservation Monitoring Centre 219 Huntingdon Road, Cambridge, CB3 0DL, U.K ; Computational Ecology and Environmental Science, Microsoft Research 21 Station Road, Cambridge, CB1 2FB, U.K
| | - Sara Contu
- Department of Life Sciences, Natural History Museum Cromwell Road, London, SW7 5BD, U.K
| | - Samantha L L Hill
- Department of Life Sciences, Natural History Museum Cromwell Road, London, SW7 5BD, U.K ; United Nations Environment Programme World Conservation Monitoring Centre 219 Huntingdon Road, Cambridge, CB3 0DL, U.K
| | - Igor Lysenko
- Imperial College London Silwood Park Campus, Buckhurst Road, Ascot, SL5 7PY, U.K
| | - Adriana De Palma
- Department of Life Sciences, Natural History Museum Cromwell Road, London, SW7 5BD, U.K ; Imperial College London Silwood Park Campus, Buckhurst Road, Ascot, SL5 7PY, U.K
| | - Helen R P Phillips
- Department of Life Sciences, Natural History Museum Cromwell Road, London, SW7 5BD, U.K ; Imperial College London Silwood Park Campus, Buckhurst Road, Ascot, SL5 7PY, U.K
| | - Rebecca A Senior
- United Nations Environment Programme World Conservation Monitoring Centre 219 Huntingdon Road, Cambridge, CB3 0DL, U.K
| | - Dominic J Bennett
- Imperial College London Silwood Park Campus, Buckhurst Road, Ascot, SL5 7PY, U.K
| | - Hollie Booth
- United Nations Environment Programme World Conservation Monitoring Centre 219 Huntingdon Road, Cambridge, CB3 0DL, U.K ; Frankfurt Zoological Society, Africa Regional Office PO Box 14935, Arusha, Tanzania
| | - Argyrios Choimes
- Department of Life Sciences, Natural History Museum Cromwell Road, London, SW7 5BD, U.K ; Imperial College London Silwood Park Campus, Buckhurst Road, Ascot, SL5 7PY, U.K
| | - David L P Correia
- Department of Life Sciences, Natural History Museum Cromwell Road, London, SW7 5BD, U.K
| | - Julie Day
- Imperial College London Silwood Park Campus, Buckhurst Road, Ascot, SL5 7PY, U.K
| | - Susy Echeverría-Londoño
- Department of Life Sciences, Natural History Museum Cromwell Road, London, SW7 5BD, U.K ; Imperial College London Silwood Park Campus, Buckhurst Road, Ascot, SL5 7PY, U.K
| | - Morgan Garon
- Imperial College London Silwood Park Campus, Buckhurst Road, Ascot, SL5 7PY, U.K
| | | | - Daniel J Ingram
- School of Life Sciences, University of Sussex Brighton, BN1 9QG, U.K
| | - Martin Jung
- Center for Macroecology, Climate and Evolution, the Natural History Museum of Denmark Universitetsparken 15, 2100, Copenhagen, Denmark
| | - Victoria Kemp
- Imperial College London Silwood Park Campus, Buckhurst Road, Ascot, SL5 7PY, U.K
| | - Lucinda Kirkpatrick
- School of Biological and Ecological Sciences, University of Stirling Bridge of Allan, Stirling, FK9 4LA, U.K
| | - Callum D Martin
- Imperial College London Silwood Park Campus, Buckhurst Road, Ascot, SL5 7PY, U.K
| | - Yuan Pan
- Department of Animal and Plant Sciences, University of Sheffield Alfred Denny Building, Western Bank, Sheffield, S10 2TN, U.K
| | - Hannah J White
- School of Biological Sciences, Queen's University Belfast 97 Lisburn Road, Belfast, BT9 7BL, U.K
| | - Job Aben
- Evolutionary Ecology Group, University of Antwerp Groenenborgerlaan 171, 2020, Antwerp, Belgium
| | - Stefan Abrahamczyk
- Nees Institute for Plant Biodiversity, University of Bonn Meckenheimer Allee 170, 53113, Bonn, Germany
| | - Gilbert B Adum
- Department of Wildlife and Range Management, FRNR, CANR, KNUST Kumasi, Ghana ; SAVE THE FROGS! Ghana Box KS 15924, Adum-Kumasi, Ghana
| | | | - Marcelo A Aizen
- CONICET, Lab. INIBIOMA (Universidad Nacional del Comahue-CONICET) Pasaje Gutierrez 1125, 8400, Bariloche, Rio Negro, Argentina
| | - Marc Ancrenaz
- HUTAN - Kinabatangan Orang-utan Conservation Programme PO Box 17793, 88874, Kota Kinabalu, Sabah, Malaysia
| | - Enrique Arbeláez-Cortés
- Museo de Zoología, Facultad de Ciencias, Universidad Nacional Autónoma de México México D.F, Mexico ; Colección de Tejidos, Instituto de Investigación de Recursos Biológicos Alexander von Humboldt Km 17 Cali-Palmira, Valle del Cauca, Colombia
| | - Inge Armbrecht
- Department of Biology, Universidad del Valle Calle 13 #100-00, Cali, Colombia
| | - Badrul Azhar
- Biodiversity Unit, Institute of Bioscience, Universiti Putra Malaysia 43400, Serdang, Selangor, Malaysia ; Faculty of Forestry, Universiti Putra Malaysia 43400, Serdang, Selangor, Malaysia
| | - Adrián B Azpiroz
- Laboratorio de Genética de la Conservación, Instituto de Investigaciones Biológicas Clemente Estable Montevideo, Uruguay
| | - Lander Baeten
- Department of Forest and Water Management, Forest & Nature Lab, Ghent University Geraardsbergsesteenweg 267, 9090, Gontrode, Belgium ; Terrestrial Ecology Unit Department of Biology, Ghent University K. L. Ledeganckstraat 35, 9000, Gent, Belgium
| | - András Báldi
- MTA Centre for Ecological Research Alkotmány u. 2-4, 2163, Vácrátót, Hungary
| | - John E Banks
- University of Washington 1900 Commerce Street, Tacoma, Washington, 98402, U.K
| | - Jos Barlow
- Lancaster Environment Centre, Lancaster University Lancaster, LA1 4YQ, U.K ; MCT/Museu Paraense Emílio Goeldi Belém, Pará, Brazil
| | - Péter Batáry
- Agroecology, Georg-August University Grisebachstrasse 6, 37077, Göttingen, Germany
| | - Adam J Bates
- University of Birmingham Edgbaston, Birmingham, B15 2TT, U.K
| | - Erin M Bayne
- Department of Biological Sciences, University of Alberta CW 405 - Biological Sciences Centre, Edmonton, AB, T6G 2E9, Canada
| | - Pedro Beja
- EDP Biodiversity Chair, CIBIO/InBio, Centro de Investigação em Biodiversidade e Recursos Genéticos, Universidade do Porto Campus Agrário de Vairão, 4485-601, Vairão, Portugal
| | - Åke Berg
- The Swedish University of Agricultural Sciences, The Swedish Biodiversity Centre SE 750 07, Uppsala, Sweden
| | - Nicholas J Berry
- University of Edinburgh, School of GeoSciences Crew Building, King's Buildings, West Mains Road, Edinburgh, EH9 3JN, U.K
| | - Jake E Bicknell
- Durrell Institute of Conservation and Ecology (DICE), School of Anthropology and Conservation, University of Kent Canterbury, CT2 7NR, U.K ; Iwokrama International Centre for Rainforest Conservation and Development 77 High Street, Georgetown, Guyana
| | - Jochen H Bihn
- Department of Animal Ecology, Philipps-University Marburg Karl-von-Frisch Strasse 8, 35032, Marburg, Germany
| | - Katrin Böhning-Gaese
- Biodiversity and Climate Research Centre (BiK-F), Senckenberg Gesellschaft für Naturforschung Senckenberganlage 25, 60325, Frankfurt am Main, Germany ; Institute for Ecology, Evolution & Diversity, Biologicum, Goethe University Frankfurt Max von Laue St. 13, D 60439, Frankfurt am Main, Germany
| | - Teun Boekhout
- CBS-KNAW Fungal Biodiversity Centre Utrecht, The Netherlands
| | - Céline Boutin
- Environment Canada, Science & Technology Branch, Carleton University 1125 Colonel By Drive, Raven Road, Ottawa, ON, K1A 0H3, Canada
| | - Jérémy Bouyer
- Unité Mixte de Recherche Contrôle des Maladies Animales Exotiques et Emergentes, Centre de Coopération Internationale en Recherche Agronomique pour le Développement (CIRAD) 34398, Montpellier, France ; Unité Mixte de Recherche 1309 Contrôle des Maladies Animales Exotiques et Emergentes, Institut national de la recherche agronomique (INRA) 34398, Montpellier, France
| | - Francis Q Brearley
- School of Science and the Environment, Manchester Metropolitan University Chester Street, Manchester, M1 5GD, U.K
| | - Isabel Brito
- University of Évora - ICAAMA, Apartado 94 7002-554, Évora, Portugal
| | - Jörg Brunet
- Southern Swedish Forest Research Centre, Swedish University of Agricultural Sciences Box 49, 230 53, Alnarp, Sweden
| | - Grzegorz Buczkowski
- Department of Entomology, Purdue University 901 W. State Street, West Lafayette, 47907, Indiana, Portugal
| | - Erika Buscardo
- Centro de Ecologia Funcional, Departamento de Ciências da Vida, Universidade de Coimbra Calçada Martim de Freitas, 3000-456, Coimbra, Portugal ; Escritório Central do LBA, Instituto Nacional de Pesquisa da Amazônia Av. André Araújo, 2936, Campus II, Aleixo, CEP 69060-001, Manaus, AM, Brazil ; Department of Botany, School of Natural Sciences, Trinity College Dublin College Green, Dublin 2, Ireland
| | - Jimmy Cabra-García
- Departamento de Zoologia, Instituto de Biociências, Universidade de São Paulo São Paulo, SP, 05508-090, Brazil
| | - María Calviño-Cancela
- Department of Ecology and Animal Biology, Faculty of Sciences, University of Vigo 36310, Vigo, Spain
| | - Sydney A Cameron
- Department of Entomology, University of Illinois Urbana, Illinois, 61801, Brazil
| | - Eliana M Cancello
- Museu de Zoologia da Universidade de São Paulo Av. Nazaré 481, 04263-000, São Paulo, SP, Brazil
| | - Tiago F Carrijo
- Museu de Zoologia da Universidade de São Paulo Av. Nazaré 481, 04263-000, São Paulo, SP, Brazil
| | - Anelena L Carvalho
- Instituto Nacional de Pesquisas da Amazônia Av. André Araújo, 2.936, Petrópolis, CEP 69067-375, Manaus, AM, Brazil
| | - Helena Castro
- Centre for Functional Ecology, Department of Life Sciences, University of Coimbra Calçada Martim de Freitas, 3000-456, Coimbra, Portugal
| | - Alejandro A Castro-Luna
- Instituto de Biotecnologia y Ecologia Aplicada (INBIOTECA), Universidad Veracruzana Av. de las Culturas Veracruzanas, 101, Col. Emiliano Zapata, CP 91090, Xalapa, Veracruz, Mexico
| | - Rolando Cerda
- Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Tropical Agricultural Research and Higher Education Center 7170, Cartago, Turrialba, 30501, Costa Rica
| | - Alexis Cerezo
- Department of Quantitative Methods and Information Systems, Faculty of Agronomy, University of Buenos Aires Av. San Martín 4453, Ciudad Autónoma de Buenos Aires, Argentina, C.P. 1417, Argentina
| | - Matthieu Chauvat
- Normandie Univ., EA 1293 ECODIV-Rouen, SFR SCALE, UFR Sciences et Techniques 76821, Mont Saint Aignan Cedex, France
| | | | - Daniel F R Cleary
- Department of Biology, CESAM, Universidade de Aveiro Campus Universitário de Santiago, 3810-193, Aveiro, Portugal
| | - Stuart P Connop
- Sustainability Research Institute, University of East London 4-6 University Way, London, E16 2RD, U.K
| | - Biagio D'Aniello
- Department of Biology, University of Naples "Federico II" Naples, Italy
| | - Pedro Giovâni da Silva
- Programa de Pós-graduação em Ecologia, Universidade Federal de Santa Catarina Florianópolis, Santa Catarina, CEP 88040-900, Brazil
| | - Ben Darvill
- British Trust for Ornithology, University of Stirling Stirling, FK9 4LA, U.K
| | - Jens Dauber
- Thünen Institute of Biodiversity Bundesallee 50, 38116, Braunschweig, Germany
| | - Alain Dejean
- CNRS, Écologie des Forêts de Guyane (UMR-CNRS 8172) BP 316, 97379, Kourou cedex, France ; Université de Toulouse, UPS, INP, Laboratoire Écologie Fonctionnelle et Environnement (Ecolab) 118 route de Narbonne, 31062, Toulouse, France
| | - Tim Diekötter
- Department of Landscape Ecology, Institute for Nature and Resource Conservation, Kiel University Olshausenstrasse 75, 24098, Kiel, Germany ; Department of Biology, Nature Conservation, University Marburg Marburg, Germany ; Institute of Integrative Biology ETH Zurich, Switzerland
| | | | - Carsten F Dormann
- Biometry and Environmental System Analysis, University of Freiburg Tennenbacher Strasse 4, 79106, Freiburg, Germany
| | - Bertrand Dumont
- INRA, UMR1213 Herbivores 63122, Saint-Genès-Champanelle, France
| | - Simon G Dures
- Imperial College London Silwood Park Campus, Buckhurst Road, Ascot, SL5 7PY, U.K ; Institute of Zoology, Zoological Society of London Nuffield Building, Regents Park, London, NW1 4RY, U.K
| | - Mats Dynesius
- Department of Ecology and Environmental Science, Umeå University 901 87, Umeå, Sweden
| | - Lars Edenius
- Wildlife, Fish and Environmental Studies, Swedish University of Agricultural Sciences 901 83, Umeå, Sweden
| | - Zoltán Elek
- MTA-ELTE-MTM Ecology Research Group, Hungarian Academy of Sciences, c/o Biological Institute, Eötvös Lóránd University Pázmány Péter sétány 1/C., 1117, Budapest, Hungary
| | - Martin H Entling
- University of Koblenz-Landau, Institute for Environmental Sciences Fortstr. 7, 76829, Landau, Germany
| | - Nina Farwig
- Department of Ecology - Conservation Ecology, Faculty of Biology, Philipps-Universität Marburg Karl-von-Frisch-Street 8, 35032, Marburg, Germany
| | - Tom M Fayle
- Imperial College London Silwood Park Campus, Buckhurst Road, Ascot, SL5 7PY, U.K ; Faculty of Science, University of South Bohemia and Institute of Entomology, Biology Centre of Academy of Sciences Czech Republic Branišovská 31, 370 05, České Budějovice, Czech Republic ; Institute for Tropical Biology and Conservation, Universiti Malaysia Sabah 88999, Kota Kinabalu, Sabah, Malaysia
| | - Antonio Felicioli
- Dipartimento di Scienze Veterinarie, Università di Pisa Viale delle Piagge, n°2, 56124, Pisa, Italy
| | - Annika M Felton
- The Southern Swedish Forest Research Centre, The Swedish University of Agricultural Sciences PO Box 49, 23453, Alnarp, Sweden
| | - Gentile F Ficetola
- Laboratoire d'Ecologie Alpine (LECA), Université Grenoble Alpes F-38000, Grenoble, France
| | - Bruno K C Filgueiras
- Programa de Pós-Graduação em Biologia Animal, Universidade Federal de Pernambuco Recife, PE 50670-901, Brazil
| | - Steven J Fonte
- Department of Plant Sciences, University of California Davis, California, 95616, Canada
| | - Lauchlan H Fraser
- Department of Natural Resource Sciences, Thompson Rivers University 900 McGill Road, Kamloops, BC, V2C 0C8, Canada
| | - Daisuke Fukuda
- IDEA Consultants Inc Okinawa Branch Office, Aja 2-6-19, Naha, Okinawa, 900-0003, Japan
| | - Dario Furlani
- Carl Zeiss Microscopy GmbH Königsallee 9 - 21, 37081, Göttingen, Germany
| | - Jörg U Ganzhorn
- University of Hamburg, Biocentre Grindel Martin-Luther-King Platz 3, 20146, Hamburg, Germany
| | - Jenni G Garden
- Seed Consulting Services 106 Gilles Street, Adelaide, 5000, SA, Australia ; School of Geography, Planning and Environmental Management, The University of Queensland St Lucia, 4072, Qld, Australia
| | - Carla Gheler-Costa
- Ecologia Aplicada/Applied Ecology, Universidade Sagrado Coração (USC) Rua Irmã Arminda, 10-50, Jardim Brasil, Bauru, São Paulo, Brazil
| | - Paolo Giordani
- DISTAV, University of Genova Corso Dogali 1M, 16136, Genova, Italy
| | - Simonetta Giordano
- Dipartimento di Biologia, Università di Napoli Federico II Campus Monte S. Angelo, Via Cinthia 4, 80126, Napoli, Italy
| | - Marco S Gottschalk
- Universidade Federal de Pelotas (UFPel) PO Box 354, CEP 96010-900, Pelotas, RS, Brazil
| | - Dave Goulson
- School of Life Sciences, University of Sussex Brighton, BN1 9QG, U.K
| | - Aaron D Gove
- Astron Environmental Services 129 Royal Street, East Perth, WA, 6004, Australia ; Department of Environment and Agriculture, Curtin University Kent Street, Bentley, WA, 6102, Australia
| | - James Grogan
- Mount Holyoke College, Department of Biological Sciences South Hadley, Massachusetts, 01075, U.K
| | - Mick E Hanley
- School of Biological Science, University of Plymouth Drake's Circus, Plymouth, PL4 8AA, U.K
| | - Thor Hanson
- 351 False Bay Drive, Friday Harbor, Washington, 98250, Malaysia
| | - Nor R Hashim
- International University of Malaya-Wales Jalan Tun Ismail, 50480, Kuala Lumpur, Malaysia
| | - Joseph E Hawes
- Coordenação de Botânica, Museu Paraense Emílio Goeldi Caixa Postal 399, CEP 66040-170, Belém, Pará, Brazil ; School of Environmental Sciences, University of East Anglia Norwich Research Park, Norwich, NR4 7TJ, U.K
| | - Christian Hébert
- Natural Resources Canada, Canadian Forest Service, Laurentian Forestry Centre 1055 du P.E.P.S., PO Box 10380, Québec, QC, G1V 4C7, Canada
| | - Alvin J Helden
- Animal & Environmental Research Group, Department of Life Sciences, Anglia Ruskin University East Road, Cambridge, CB1 1PT, U.K
| | - John-André Henden
- University of Tromsø, Department of Arctic and Marine Biology 9037, Tromsø, Norway
| | - Lionel Hernández
- Universidad Nacional Experimental de Guayana Apdo. Postal 8050, Puerto Ordaz, 8015, Estado Bolívar, Venezuela
| | - Felix Herzog
- Agroscope Reckenholzstr. 191, 8046, Zurich, Switzerland
| | - Diego Higuera-Diaz
- Corporación Sentido Natural Carrera 70H No. 122 - 98, Apartamento 101, Bogotá, Colombia
| | - Branko Hilje
- Escuela de Ingeniería Forestal, Tecnológico de Costa Rica Apartado, 159-7050, Cartago, Costa Rica ; Asociación para la Conservación y el Estudio de la Biodiversidad (ACEBIO) Casa 15, Barrio Los Abogados, Zapote, San José, Costa Rica
| | - Finbarr G Horgan
- International Rice Research Institute DAPO Box 7777, Metro Manila, The Philippines
| | - Roland Horváth
- University of Debrecen, Department of Ecology PO Box 71, 4010, Debrecen, Hungary
| | - Kristoffer Hylander
- Department of Ecology, Environment and Plant Sciences, Stockholm University 106 91, Stockholm, Sweden
| | - Paola Isaacs-Cubides
- Instituto de Investigaciones y Recursos Biológicos Alexander von Humboldt Bogotá, Colombia
| | - Masahiro Ishitani
- Hiroshima University, Graduate School of Education 1-1-1, Kagamiyama, Higashi-Hiroshima, 739-8524, Japan
| | - Carmen T Jacobs
- Scarab Research Group, University of Pretoria Pretoria, South Africa
| | - Víctor J Jaramillo
- Centro de Investigaciones en Ecosistemas, Universidad Nacional Autónoma de México A.P. 27-3 Santa María de Guido, Morelia, Michoacán,, México C.P. 58090, Mexico
| | - Birgit Jauker
- Department of Animal Ecology, Justus-Liebig University Heinrich-Buff-Ring 26-32, 35392, Giessen, Germany
| | - Mats Jonsell
- Swedish University of Agricultural Sciences, Department of Ecology Box 7044, 750 07, Uppsala, Sweden
| | - Thomas S Jung
- Yukon Department of Environment P.O. Box 2703, Whitehorse, YT, Y1A 2C6, Canada
| | - Vena Kapoor
- Nature Conservation Foundation Mysore, India
| | - Vassiliki Kati
- Department of Environmental & Natural Resources Management, University of Patras Seferi 2, 30100, Agrinio, Greece
| | - Eric Katovai
- Centre for Tropical Environmental and Sustainability Science (TESS) and School of Marine and Tropical Biology, James Cook University Cairns, Qld, Australia ; School of Science and Technology, Pacific Adventist University Port Moresby, Papua New Guinea
| | - Michael Kessler
- Institute of Systematic Botany, University of Zurich Zollikerstrasse 107, 8008, Zurich, Switzerland
| | - Eva Knop
- Institute of Ecology and Evolution, University of Bern Baltzerstrasse 6, 3012, Bern, Switzerland
| | - Annette Kolb
- Institute of Ecology, University of Bremen FB2, Leobener Str., 28359, Bremen, Germany
| | - Ádám Kőrösi
- MTA-ELTE-MTM Ecology Research Group Pázmány Péter s. 1/c, Budapest, 1117, Hungary, Germany ; Field Station Fabrikschleichach, Biocenter, University of Würzburg Glasshüttenstr. 5, 96181, Rauhenebrach, Germany
| | - Thibault Lachat
- Swiss Federal Institute for Forest, Snow and Landscape Research WSL Zürcherstrasse 11, 8903, Birmensdorf, Switzerland
| | - Victoria Lantschner
- Instituto Nacional de Tecnología Agropecuaria EEA Bariloche, 8400, Bariloche, Argentina
| | | | - Gretchen LeBuhn
- Department of Biology, San Francisco State University 1600 Holloway Ave, San Francisco, California, 94132
| | - Jean-Philippe Légaré
- Laboratoire de diagnostic en phytoprotection, Ministère de l'agriculture, des pêcheries et de l'alimentation du Québec 2700 rue Einstein, QC, G1P 3W8, Canada
| | - Susan G Letcher
- Purchase College (State University of New York) 735 Anderson Hill Road, Purchase, New York, 10577, U.K
| | | | | | - Mounir Louhaichi
- International Center for Agricultural Research in the Dry Areas (ICARDA) P.O. Box 950764, Amman, 11195, Jordan
| | - Gabor L Lövei
- Aarhus University, Department of Agroecology, Flakkebjerg Research Centre Forsøgsvej 1, 4200, Slagelse, Denmark
| | - Manuel Esteban Lucas-Borja
- Castilla La Mancha University, School of Advanced Agricultural Engineering, Department of Agroforestry Technology and Science and Genetics Campus Universitario s/n, C.P. 02071, Albacete, Spain
| | - Victor H Luja
- Universidad Autónoma de Nayarit, Unidad Académica de Turismo, Coordinación de Investigación y Posgrado Ciudad de la Cultura Amado Nervo s/n, C.P. 63155, Tepic, Nayarit, Mexico
| | - Kaoru Maeto
- Graduate School of Agricultural Science, Kobe University Kobe, 657-8501, Japan
| | - Tibor Magura
- Hortobágy National Park Directorate, 4002, Debrecen, P.O.Box 216, Hungary
| | - Neil Aldrin Mallari
- Fauna & Flora International Philippines #8 Foggy Heights Subdivision San Jose, Tagaytay City, 4120, Philippines ; De La Salle University-Dasmariñas West Ave, Dasmariñas, 4115, Philippines
| | - Erika Marin-Spiotta
- Department of Geography, University of Wisconsin-Madison 550 North Park Street, Madison, Wisconsin, 53706, U.K
| | - E J P Marshall
- Marshall Agroecology Ltd, 2 Nut Tree Cottages, Barton, Winscombe,, BS25 1DU, U.K
| | - Eliana Martínez
- Escuela de Posgrados, Facultad de Agronomía, Doctorado en Agroecología, Universidad Nacional de Colombia, Cra 30 No. 45-03, Ciudad Universitaria Bogotá, Colombia
| | - Margaret M Mayfield
- The University of Queensland, School of Biological Sciences Brisbane, Qld, 4120, Australia
| | - Grzegorz Mikusinski
- Swedish University of Agricultural Sciences, Department of Ecology Grimsö Wildlife Research Station, 730 91, Riddarhyttan, Sweden
| | - Jeffrey C Milder
- Rainforest Alliance 233 Broadway, 28th Floor, New York City, New York, 10279, Kenya
| | - James R Miller
- Department of Natural Resources and Environmental Sciences N-407 Turner Hall, MC-047, 1102 South Goodwin Ave., Urbana, Illinois, 61801, Kenya
| | - Carolina L Morales
- CONICET, Lab. INIBIOMA (Universidad Nacional del Comahue-CONICET) Pasaje Gutierrez 1125, 8400, Bariloche, Rio Negro, Argentina
| | - Mary N Muchane
- National Museums of Kenya, Botany Department P.O. Box 40658, 00100, Nairobi, Kenya
| | - Muchai Muchane
- Department of Zoology, National Museums of Kenya P.O. Box 40658, 00100, Nairobi, Kenya
| | - Robin Naidoo
- WWF 1250 24th Street NW, Washington, District of Columbia, 20037, China
| | - Akihiro Nakamura
- Key Laboratory of Tropical Forest Ecology, Xishuangbanna Tropical Botanical Garden CAS, Menglun, Mengla, Yunnan, 666303, China
| | - Shoji Naoe
- Forestry and Forest Products Research Institute Matsunosato 1, Tsukuba Ibaraki, 305-8687, Japan
| | - Guiomar Nates-Parra
- Laboratorio de Investigaciones en Abejas, Departamento de Biología, Facultad de Ciencias, Universidad Nacional de Colombia Sede Bogotá, Colombia
| | | | - Eike L Neuschulz
- Biodiversity and Climate Research Centre (BiK-F), Senckenberg Gesellschaft für Naturforschung Senckenberganlage 25, 60325, Frankfurt am Main, Germany
| | - Norbertas Noreika
- Department of Biosciences and Department of Environmental Sciences, Urban Ecology Research Group, University of Helsinki Viikinkaari 2a, P.O. Box 65, FI-00014, Helsinki, Finland
| | - Olivia Norfolk
- School of Biology, The University of Nottingham University Park, Nottingham, NG7 2RD, U.K
| | - Jorge Ari Noriega
- Laboratorio de Zoología y Ecología Acuática - LAZOEA, Universidad de Los Andes Bogotá, Colombia
| | | | - Niall O'Dea
- Oxford University Centre for the Environment, University of Oxford South Parks Road, Oxford, OX1 3QY, U.K
| | - William Oduro
- Department of Wildlife and Range Management, FRNR, CANR, KNUST Kumasi, Ghana ; SAVE THE FROGS! Ghana Box KS 15924, Adum-Kumasi, Ghana
| | - Caleb Ofori-Boateng
- Department of Wildlife and Range Management, Kwame Nkrumah University of Science and Technology Kumasi, Ghana ; Forestry Research Institute of Ghana Kumasi, Ghana
| | - Chris O Oke
- Department of Animal & Environmental Biology, University of Benin Benin City, Nigeria
| | - Lynne M Osgathorpe
- The Royal Society for the Protection of Birds (RSPB), The Lodge Sandy, Bedfordshire,, SG19 2DL, U.K
| | - Juan Paritsis
- Laboratorio Ecotono, CONICET-INIBIOMA, Universidad Nacional del Comahue Quintral 1250, Bariloche, 8400, Argentina
| | - Alejandro Parra-H
- Departamento de Biologia, Faculdade de Filosofia Ciências e Letras de Ribeirão Preto, Universidade de São Paulo Avenida. Bandeirantes, 3900 - CEP 14040-901 - Bairro Monte Alegre, Ribeirão Preto, SP, Brazil ; Laboratorio de Investigaciones en Abejas-LABUN, Departamento de Biología, Facultad de Ciencias, Universidad Nacional de Colombia Carrera 45 N° 26-85, Edificio Uriel Gutiérrez, Bogotá, DC, Colombia, Argentina
| | - Nicolás Pelegrin
- Instituto de Diversidad y Ecología Animal (CONICET-UNC) and Centro de Zoología Aplicada (UNC) Rondeau 798 X5000AVP, Córdoba, Argentina
| | - Carlos A Peres
- School of Environmental Sciences, University of East Anglia Norwich, NR4 7TJ, U.K
| | - Anna S Persson
- Lund University, Department of Biology/Biodiversity Ecology Building, 223 62, Lund, Sweden
| | - Theodora Petanidou
- Laboratory of Biogeography & Ecology, Department of Geography, University of the Aegean 81100, Mytilene, Greece
| | - Ben Phalan
- Department of Zoology, University of Cambridge Cambridge, CB2 3EJ, U.K
| | - T Keith Philips
- Department of Biology, Western Kentucky University 1906 College Heights Blvd., Bowling Green, Kentucky, 42101, Ireland
| | - Katja Poveda
- Entomology, Cornell University 4126 Comstock Hall, Ithaca, New York, 14850, Ireland
| | - Eileen F Power
- School of Natural Sciences, Trinity College Dublin College Green, Dublin 2, Ireland
| | - Steven J Presley
- Center for Environmental Sciences and Engineering & Department of Ecology and Evolutionary Biology, University of Connecticut 3107 Horsebarn Hill Road, Storrs, Connecticut, 06269-4210, Portugal
| | - Vânia Proença
- IN+, Instituto Superior Técnico, Universidade de Lisboa Av. Rovisco Pais 1, 1049-001, Lisboa, Portugal
| | - Marino Quaranta
- CRA-ABP, Consiglio per la Ricerca e la sperimentazione in Agricoltura, Centro di ricerca per l'agrobiologia e la pedologia Via Lanciola 12/A, 50125 - Cascine del Riccio, Firenze, Italy
| | - Carolina Quintero
- Laboratorio Ecotono, CONICET-INIBIOMA, Universidad Nacional del Comahue Quintral 1250, Bariloche, 8400, Argentina
| | - Nicola A Redpath-Downing
- The Royal Society for the Protection of Birds (RSPB) 2 Lochside View, Edinburgh Park, Edinburgh, EH12 9DH, U.K
| | - J Leighton Reid
- Department of Forest Ecosystems and Society, Oregon State University Corvallis, Oregon, 97331, Brazil
| | - Yana T Reis
- Universidade Federal de Sergipe, Cidade Universitária Prof. José Aloísio de Campos Jardim Rosa Elze, São Cristóvão, Brazil
| | - Danilo B Ribeiro
- Centro de Ciências Biológicas e da Saúde, Universidade Federal de Mato Grosso do Sul P.O Box 549, 79070-900, Campo Grande, Brazil
| | - Barbara A Richardson
- 165 Braid Road, Edinburgh, EH10 6JE, U.K ; Associate Scientist, Luquillo LTER, Institute for Tropical Ecosystem Studies, College of Natural Sciences, University of Puerto Rico at Rio Piedras P.O. Box 70377, San Juan, Puerto Rico, 00936-8377, Argentina
| | - Michael J Richardson
- 165 Braid Road, Edinburgh, EH10 6JE, U.K ; Associate Scientist, Luquillo LTER, Institute for Tropical Ecosystem Studies, College of Natural Sciences, University of Puerto Rico at Rio Piedras P.O. Box 70377, San Juan, Puerto Rico, 00936-8377, Argentina
| | - Carolina A Robles
- PROPLAME-PRHIDEB-CONICET, Departamento de Biodiversidad y Biología Experimental, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Ciudad Universitaria PB II, 4to piso, (CP1428EHA), Ciudad Autónoma de Buenos Aires, Argentina
| | - Jörg Römbke
- Biodiversity and Climate Research Centre (BiK-F), Senckenberg Gesellschaft für Naturforschung Senckenberganlage 25, 60325, Frankfurt am Main, Germany ; ECT Oekotoxikologie GmbH Böttgerstr. 2-14, 65439, Flörsheim, Germany
| | | | - Loreta Rosselli
- Universidad de Ciencias Aplicadas y Ambientales U.D.C.A. Cl 222 No. 55-37, Bogotá, Colombia
| | - Stephen J Rossiter
- School of Biological and Chemical Sciences, Queen Mary University of London Mile End Road, London, E3 5GN, U.K
| | - T'ai H Roulston
- Department of Environmental Sciences, University of Virginia Charlottesville, Virginia, 22904-4123, Canada ; Blandy Experimental Farm 400 Blandy Farm Lane, Boyce, Virginia, 22620, Canada
| | - Laurent Rousseau
- Département des sciences biologiques, Université du Québec à Montréal (UQAM) Case postale 8888, Succursale Centre-ville, Montréal, QC, H3C 3P8, Canada
| | - Jonathan P Sadler
- School of Geography, Earth and Environmental Sciences, University of Birmingham Birmingham, B15 2TT, U.K
| | - Szabolcs Sáfián
- Institute of Silviculture and Forest Protection, University of West Hungary Bajcsy-Zsilinszky u. 4., 9400, Sopron, Hungary
| | - Romeo A Saldaña-Vázquez
- Red de Ecología Funcional, Instituto de Ecología A.C. Carretera Antigua a Coatepec N° 351 El Haya, CP, 91070, Xalapa, Veracruz, Mexico
| | - Ulrika Samnegård
- Stockholm University, Department of Ecology, Environment and Plant Sciences SE, 106 91, Stockholm, Sweden
| | - Christof Schüepp
- Institute of Ecology and Evolution, University of Bern Baltzerstrasse 6, 3012, Bern, Switzerland
| | - Oliver Schweiger
- Helmholtz Centre for Environmental Research - UFZ Theodor-Lieser-Strasse 4, 06120, Halle, Germany
| | - Jodi L Sedlock
- Lawrence University 711 E. Boldt Way, Appleton, Wisconsin, 54911, India
| | - Ghazala Shahabuddin
- School of Human Ecology, Dr. B.R. Ambedkar University Lothian Road, Delhi, 110006, India
| | - Douglas Sheil
- Department of Ecology and Natural Resource Management (INA), Norwegian University of Life Sciences (NMBU) Box 5003, 1432, Ås, Norway ; Center for International Forestry Research Bogor, 16000, Indonesia
| | - Fernando A B Silva
- Universidade Federal do Pará, Instituto de Ciências Biológicas Rua Augusto Correa, 01, Belém, 66075-110, Pará, Brazil
| | - Eleanor M Slade
- Department of Zoology, University of Oxford South Parks Road, Oxford, OX1 3PS, U.K
| | - Allan H Smith-Pardo
- USDA - APHIS - PPQ 389 Oyster Point Blvd. Suite 2, South San Francisco, California, 94080, Colombia, Republic of Singapore ; Universidad Nacional de Colombia Cra. 64 X Cll. 65. Bloque 11, Oficina 207, Medellin, Colombia, Republic of Singapore
| | - Navjot S Sodhi
- Department of Biological Sciences, National University of Singapore 14 Science Drive 4, Singapore City, 117543, Republic of Singapore
| | - Eduardo J Somarriba
- Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Tropical Agricultural Research and Higher Education Center 7170, Cartago, Turrialba, 30501, Costa Rica
| | - Ramón A Sosa
- EComAS (Grupo de Investigación en Ecología de Comunidades Áridas y Semiáridas), Dpto. de Recursos Naturales, Facultad de Ciencias Exactas y Naturales, Universidad Nacional de La Pampa Santa Rosa, Argentina
| | - Jane C Stout
- School of Natural Sciences and Trinity Centre for Biodiversity Research, Trinity College Dublin College Green, Dublin 2, Ireland
| | - Matthew J Struebig
- Durrell Institute of Conservation and Ecology (DICE), School of Anthropology and Conservation, University of Kent Canterbury, CT2 7NR, U.K
| | - Yik-Hei Sung
- Kadoorie Conservation China, Kadoorie Farm and Botanic Garden Lam Kam Road, Tai Po, New Territories, Hong Kong SAR, China
| | - Caragh G Threlfall
- Department of Resource Management and Geography, The University of Melbourne 500 Yarra Boulevard, Richmond, VIC, 3121, Australia
| | - Rebecca Tonietto
- Northwestern University Program in Plant Biology and Conservation 2205 Tech Drive, O.T. Hogan Hall, Room 2-144, Evanston, Illinois, 60208, Hungary ; Chicago Botanic Garden 1000 Lake Cook Road, Glencoe, Illinois, 60022, Hungary
| | - Béla Tóthmérész
- MTA-DE Biodiversity and Ecosystem Services Research Group Egyetem ter 1, Debrecen, 4032, Hungary
| | - Teja Tscharntke
- Agroecology, Georg-August University Grisebachstrasse 6, 37077, Göttingen, Germany
| | - Edgar C Turner
- University Museum of Zoology Downing Street, Cambridge, CB2 3EJ, U.K
| | - Jason M Tylianakis
- Imperial College London Silwood Park Campus, Buckhurst Road, Ascot, SL5 7PY, U.K ; University of Canterbury Private bag 4800, Christchurch, 8140, New Zealand
| | - Adam J Vanbergen
- NERC Centre for Ecology & Hydrology, Bush Estate Penicuik, Edinburgh, EH26 0QB, U.K
| | - Kiril Vassilev
- Institute of Biodiversity and Ecosystem Research, Bulgarian Academy of Science 23 Akademik Georgi Bonchev str., Block 23, 1113, Sofia, Bulgaria
| | - Hans A F Verboven
- Department of Earth and Environmental Science, Division Forest, Nature and Landscape, KU Leuven Celestijnenlaan 200E, 3001, Leuven, Belgium
| | - Carlos H Vergara
- Departamento de Ciencias Químico-Biológicas, Universidad de las Américas Puebla 72810, Cholula, Puebla, Mexico
| | - Pablo M Vergara
- Universidad de Santiago de Chile Avenida Alameda Libertador Bernardo O'Higgins 3363, Estación Central, Santiago, Chile
| | - Jort Verhulst
- Spotvogellaan 68, 2566 PN, The Hague, The Netherlands
| | - Tony R Walker
- School of Biology, The University of Nottingham University Park, Nottingham, NG7 2RD, U.K ; Dillon Consulting Limited 137 Chain Lake Drive, Halifax, NS, B3S 1B3, Canada
| | - Yanping Wang
- The Key Laboratory of Conservation Biology for Endangered Wildlife of the Ministry of Education, College of Life Sciences, Zhejiang University Hangzhou, 310058, China
| | - James I Watling
- University of Florida 3205 College Avenue, Fort Lauderdale, Florida, 33314, Australia
| | - Konstans Wells
- The Environment Institute and School of Earth and Environmental Sciences, The University of Adelaide SA, 5005, Australia ; Institute of Experimental Ecology, University of Ulm Albert-Einstein-Allee 11, 89069, Ulm, Germany
| | - Christopher D Williams
- Behavioural Ecology and Biocontrol, Department of Biology, National University of Ireland Maynooth, Co. Kildare, Ireland
| | - Michael R Willig
- Center for Environmental Sciences & Engineering, University of Connecticut 3107 Horsebarn Hill Road, Storrs, Connecticut, 06269-4210, Australia ; Department of Ecology & Evolutionary Biology, University of Connecticut 3107 Horsebarn Hill Road, Storrs, Connecticut, 06269-4210, Australia
| | | | - Jan H D Wolf
- University of Amsterdam, Institute for Biodiversity and Ecosystem Dynamics (IBED) P.O. Box 94248, 1090 GE, Amsterdam, The Netherlands
| | - Ben A Woodcock
- NERC Centre for Ecology & Hydrology, Crowmarsh Gifford Wallingford, Oxfordshire, OX10 8BB, U.K
| | - Douglas W Yu
- University of East Anglia Norwich Research Park, Norwich, Norfolk,, NR4 7TJ, U.K ; Kunming Institute of Zoology Kunming, Yunnan,, 650023, China
| | - Andrey S Zaitsev
- Institute of Animal Ecology, Justus-Liebig-University Heinrich-Buff-Ring 26, 35392, Giessen, Germany ; A. N. Severtsov Institute of Ecology and Evolution Leninsky Prospekt 33, 119071, Moscow, Russia
| | - Ben Collen
- Centre for Biodiversity and Environment Research, Department of Genetics, Evolution and Environment, University College London Gower Street, London, WC1E 6BT, U.K
| | - Rob M Ewers
- Imperial College London Silwood Park Campus, Buckhurst Road, Ascot, SL5 7PY, U.K
| | - Georgina M Mace
- Centre for Biodiversity and Environment Research, Department of Genetics, Evolution and Environment, University College London Gower Street, London, WC1E 6BT, U.K
| | - Drew W Purves
- Computational Ecology and Environmental Science, Microsoft Research 21 Station Road, Cambridge, CB1 2FB, U.K
| | - Jörn P W Scharlemann
- United Nations Environment Programme World Conservation Monitoring Centre 219 Huntingdon Road, Cambridge, CB3 0DL, U.K ; School of Life Sciences, University of Sussex Brighton, BN1 9QG, U.K
| | - Andy Purvis
- Department of Life Sciences, Natural History Museum Cromwell Road, London, SW7 5BD, U.K ; Imperial College London Silwood Park Campus, Buckhurst Road, Ascot, SL5 7PY, U.K
| |
Collapse
|
14
|
Bennett DJ, Ogloff JRP, Mullen PE, Thomas SDM, Wallace C, Short T. Schizophrenia disorders, substance abuse and prior offending in a sequential series of 435 homicides. Acta Psychiatr Scand 2011; 124:226-33. [PMID: 21644942 DOI: 10.1111/j.1600-0447.2011.01731.x] [Citation(s) in RCA: 40] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
OBJECTIVE To examine the relationship between committing homicide, the presence of schizophrenia, substance misuse and past criminality. METHOD The study employed a data linkage design, using contacts recorded on two statewide databases, one of which recorded public mental health services contacts and the second of which recorded contacts with the police. The estimated rates of schizophrenia disorders, substance abuse and criminal convictions found among a population of 435 homicide offenders were contrasted with estimated rates in two composite comparison samples. RESULTS Of the 435 offenders, 38 (8.7%) had been diagnosed with a schizophrenia disorder, which was RR 13.11 (95% CI 9.14-18.80) times more likely than a comparison sample. Rates of known substance abuse between homicide offenders with and without schizophrenia and community-dwelling residents with schizophrenia did not differ significantly. However, these rates were higher than those found in the general community. A similar pattern emerged for comparisons regarding offending histories between these same groups. CONCLUSION The association between homicidal violence and having a schizophrenia disorder cannot be explained away simply on the basis of either comorbid substance abuse or prior criminal offending.
Collapse
Affiliation(s)
- D J Bennett
- Crime Department, Victoria Police, Australia.
| | | | | | | | | | | |
Collapse
|
15
|
Rank MM, Murray KC, Stephens MJ, D'Amico J, Gorassini MA, Bennett DJ. Adrenergic receptors modulate motoneuron excitability, sensory synaptic transmission and muscle spasms after chronic spinal cord injury. J Neurophysiol 2010; 105:410-22. [PMID: 21047936 DOI: 10.1152/jn.00775.2010] [Citation(s) in RCA: 58] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022] Open
Abstract
The brain stem provides most of the noradrenaline (NA) present in the spinal cord, which functions to both increase spinal motoneuron excitability and inhibit sensory afferent transmission to motoneurons (excitatory postsynaptic potentials; EPSPs). NA increases motoneuron excitability by facilitating calcium-mediated persistent inward currents (Ca PICs) that are crucial for sustained motoneuron firing. Spinal cord transection eliminates most NA and accordingly causes an immediate loss of PICs and emergence of exaggerated EPSPs. However, with time PICs recover, and thus the exaggerated EPSPs can then readily trigger these PICs, which in turn produce muscle spasms. Here we examined the contribution of adrenergic receptors to spasms in chronic spinal rats. Selective activation of the α(1A) adrenergic receptor with the agonists methoxamine or A61603 facilitated Ca PIC and spasm activity, recorded both in vivo and in vitro. In contrast, the α(2) receptor agonists clonidine and UK14303 did not facilitate Ca PICs, but did decrease the EPSPs that trigger spasms. Moreover, in the absence of agonists, spasms recorded in vivo were inhibited by the α(1) receptor antagonists WB4010, prazosin, and REC15/2739, and increased by the α(2) receptor antagonist RX821001, suggesting that both adrenergic receptors were endogenously active. In contrast, spasm activity recorded in the isolated in vitro cord was inhibited only by the α(1) antagonists that block constitutive receptor activity (activity in the absence of NA; inverse agonists, WB4010 and prazosin) and not by the neutral antagonist REC15/2739, which only blocks conventional NA-mediated receptor activity. RX821001 had no effect in vitro even though it is an α(2) receptor inverse agonist. Our results suggest that after chronic spinal cord injury Ca PICs and spasms are facilitated, in part, by constitutive activity in α(1) adrenergic receptors. Additionally, peripherally derived NA (or similar ligand) activates both α(1) and α(2) adrenergic receptors, controlling PICs and EPSPs, respectively.
Collapse
Affiliation(s)
- M M Rank
- Centre for Neuroscience, University of Alberta, Edmonton, Alberta T6G 2E1, Canada
| | | | | | | | | | | |
Collapse
|
16
|
Fouad K, Rank MM, Vavrek R, Murray KC, Sanelli L, Bennett DJ. Locomotion after spinal cord injury depends on constitutive activity in serotonin receptors. J Neurophysiol 2010; 104:2975-84. [PMID: 20861436 DOI: 10.1152/jn.00499.2010] [Citation(s) in RCA: 65] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022] Open
Abstract
Following spinal cord injury (SCI) neurons caudal to the injury are capable of rhythmic locomotor-related activity that can form the basis for substantial functional recovery of stepping despite the loss of crucial brain stem-derived neuromodulators like serotonin (5-HT). Here we investigated the contribution of constitutive 5-HT(2) receptor activity (activity in the absence of 5-HT) to locomotion after SCI. We used a staggered hemisection injury model in rats to study this because these rats showed a robust recovery of locomotor function and yet a loss of most descending axons. Immunolabeling for 5-HT showed little remaining 5-HT below the injury, and locomotor ability was not correlated with the amount of residual 5-HT. Furthermore, blocking 5-HT(2) receptors with an intrathecal (IT) application of the neutral antagonist SB242084 did not affect locomotion (locomotor score and kinematics were unaffected), further indicating that residual 5-HT below the injury did not contribute to generation of locomotion. As a positive control, we found that the same application of SB242084 completely antagonized the muscle activity induced by exogenous application of the 5-HT(2) receptor agonists alpha-methyl-5-HT (IT). In contrast, blocking constitutive 5-HT(2) receptor activity with the potent inverse agonist SB206553 (IT) severely impaired stepping as assessed with kinematic recordings, eliminating most hindlimb weight support and overall reducing the locomotor score in both hind legs. However, even in the most severely impaired animals, rhythmic sweeping movements of the hindlimb feet were still visible during forelimb locomotion, suggesting that SB206553 did not completely eliminate locomotor drive to the motoneurons or motoneuron excitability. The same application of SB206553 had no affect on stepping in normal rats. Thus while normal rats can compensate for loss of 5-HT(2) receptor activity, after severe spinal cord injury rats require constitutive activity in these 5-HT(2) receptors to produce locomotion.
Collapse
Affiliation(s)
- K Fouad
- Centre for Neuroscience, Faculty of Rehabilitation Medicine, University of Alberta, Edmonton, Alberta T6G 2E1, Canada
| | | | | | | | | | | |
Collapse
|
17
|
Affiliation(s)
- D J Bennett
- Centre for Neuroscience, University of Alberta, Edmonton, Alberta, Canada
| |
Collapse
|
18
|
Abstract
Low voltage-activated persistent inward calcium currents (Ca PICs) occur in rat motoneurons and are mediated by Cav1.3 L-type calcium channels (L-Ca current). The objectives of this paper were to determine whether this L-Ca current activates a sustained calcium-activated potassium current (SK current) and examine how such SK currents change with spinal injury. For comparison, the SK current that produces the postspike afterhyperpolarization (mAHP) was also quantified. Intracellular recordings were made from motoneurons of adult acute and chronic spinal rats while the whole sacrocaudal spinal cord was maintained in vitro. Spikes/AHPs were evoked with current injection or ventral root stimulation. Application of the SK channel blocker apamin completely eliminated the mAHP, which was not significantly different in chronic and acute spinal rats. The Ca PICs were measured with slow voltage ramps (or steps) with TTX to block sodium currents. In chronic spinal rats, the PICs were activated at -58.6 +/- 6.0 mV and were 2.2 +/- 1.2 nA in amplitude, significantly larger than in acute spinal rats. Apamin significantly increased the PIC, indicating that there was an SK current activated by L-Ca currents (SK(L) current), which ultimately reduced the net PIC. This SK(L) current was not different in acute and chronic spinal rats. The SK(AHP) and the SK(L) currents were activated by different calcium currents because the mAHP/SK(AHP) was blocked by the N, P-type calcium channel blocker omega-conotoxin MVIIC and was resistant to the L-type calcium channel blocker nimodipine, whereas the L-Ca and SK(L) currents were blocked by nimodipine. Furthermore, the SK(AHP) current activated within 10 ms of the spike, whereas the SK(L) current was delayed approximately 100 ms after the onset of the L-Ca current, suggesting that the SK(L) currents were not as spatially close to the L-Ca currents. Finally, the SK(L) and the L-Ca currents were poorly space clamped, with oscillations at their onset and hysteresis in their activation and deactivation voltages, consistent with currents of dendritic origin. The impact of these dendritic currents was especially pronounced in 15% of motoneurons, where apamin led to uncontrollable L-Ca currents that could not be deactivated, even with large hyperpolarizations of the soma. Thus, although the SK(L) currents are fairly small, they play a critical role in terminating the dendritic L-Ca currents.
Collapse
Affiliation(s)
- X Li
- University of Alberta, Edmonton, AB T6G 2S2, Canada
| | | |
Collapse
|
19
|
Anelli R, Sanelli L, Bennett DJ, Heckman CJ. Expression of L-type calcium channel alpha(1)-1.2 and alpha(1)-1.3 subunits on rat sacral motoneurons following chronic spinal cord injury. Neuroscience 2007; 145:751-63. [PMID: 17291691 DOI: 10.1016/j.neuroscience.2006.12.043] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2006] [Revised: 12/10/2006] [Accepted: 12/11/2006] [Indexed: 12/22/2022]
Abstract
In the presence of the monoamines serotonin and norepinephrine, motoneurons readily generate large persistent inward currents (PICs). The resulting plateau potentials amplify and sustain motor output. Monoaminergic input to the cord originates in the brainstem and the sharp reduction in monoamine levels that occurs following acute spinal cord injury greatly decreases motoneuron excitability. However, recent studies in the adult sacral cord of the rat have shown that motoneurons reacquire the ability to generate PICs and plateau potentials within 1-2 months following spinal transection. Ca(v)1.3 L-type calcium channels are involved in generating PICs in both healthy and injured animals. Additionally, expression of Ca(v)1.2 and Ca(v)1.3 L-type calcium channels is altered in several pathological conditions. Therefore, in this paper we analyzed the expression of L-type calcium channel alpha(1) subunits within the motoneuron pool following a complete transection of the spinal cord at the level of the sacral vertebra (S)2 segment. The analysis was done both caudally (S4 segment) and rostrally [thoracic vertebra (T)6 segment] from the injury site. The S4 segment was significantly reduced in diameter when compared with control animals, and this reduction was more evident in the white matter. Ca(v)1.2 alpha(1) subunit expression significantly increased (26%) in the motoneuron pool located caudally but not rostrally from the injury site. In contrast, the expression of Ca(v)1.3 alpha(1) subunit remained unchanged in both S4 and T6 segments. The differential expression of the two alpha(1) subunits in spinal injury suggests that Ca(v)1.2 and Ca(v)1.3 channels have different functions in neuronal adaptation following spinal cord injury.
Collapse
Affiliation(s)
- R Anelli
- Department of Physiology, Northwestern University Feinberg School of Medicine, Morton 5-666, 303 East Chicago Avenue (M211), Chicago, IL 60611, USA.
| | | | | | | |
Collapse
|
20
|
Li X, Murray K, Harvey PJ, Ballou EW, Bennett DJ. Serotonin facilitates a persistent calcium current in motoneurons of rats with and without chronic spinal cord injury. J Neurophysiol 2006; 97:1236-46. [PMID: 17079337 PMCID: PMC5718189 DOI: 10.1152/jn.00995.2006] [Citation(s) in RCA: 108] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022] Open
Abstract
In the months after spinal cord transection, motoneurons in the rat spinal cord develop large persistent inward currents (PICs) that are responsible for muscle spasticity. These PICs are mediated by low-threshold TTX-sensitive sodium currents (Na PIC) and L-type calcium currents (Ca PIC). Recently, the Na PIC was shown to become supersensitive to serotonin (5-HT) after chronic injury. In the present paper, a similar change in the sensitivity of the Ca PIC to 5-HT was investigated after injury. The whole sacrocaudal spinal cord from acute spinal rats and spastic chronic spinal rats (S2 level transection 2 mo previously) was studied in vitro. Intracellular recordings were made from motoneurons and slow voltages ramps were applied to measure PICs. TTX was used to block the Na PIC. For motoneurons of chronic spinal rats, a low dose of 5-HT (1 microM) significantly lowered the threshold of the Ca PIC from -56.7 +/- 6.0 to -63.1 +/- 7.1 mV and increased the amplitude of the Ca PIC from 2.4 +/- 1.0 to 3.0 +/- 0.73 nA. Higher doses of 5-HT acted similarly. For motoneurons of acute spinal rats, low doses of 5-HT had no significant effects, whereas a high dose (about 30 microM) significantly lowered the threshold of the L-Ca PIC from -58.5 +/- 14.8 to -62.5 +/- 3.6 mV and increased the amplitude of the Ca PIC from 0.69 +/- 1.05 to 1.27 +/- 1.1 nA. Thus Ca PICs in motoneurons are about 30-fold supersensitive to 5-HT in chronic spinal rats. The 5-HT-induced facilitation of the Ca PIC was blocked by nimodipine, not by the I(h) current blocker Cs(+) (3 mM) or the SK current blocker apamin (0.15 microM), and it lasted for hours after the removal of 5-HT from the nCSF, even increasing initially after removing 5-HT. The effects of 5-HT make motoneurons more excitable and ultimately lead to larger, more easily activated plateaus and self-sustained firing. The supersensitivity to 5-HT suggests the small amounts of endogenous 5-HT below the injury in a chronic spinal rat may act on supersensitive receptors to produce large Ca PICs and ultimately enable muscle spasms.
Collapse
Affiliation(s)
- X Li
- Centre for Neuroscience 513 HMRC, University of Alberta, Edmonton, Alberta, Canada T6G 2S2
| | | | | | | | | |
Collapse
|
21
|
Harvey PJ, Li X, Li Y, Bennett DJ. Endogenous monoamine receptor activation is essential for enabling persistent sodium currents and repetitive firing in rat spinal motoneurons. J Neurophysiol 2006; 96:1171-86. [PMID: 16760346 PMCID: PMC5726393 DOI: 10.1152/jn.00341.2006] [Citation(s) in RCA: 112] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022] Open
Abstract
The spinal cord and spinal motoneurons are densely innervated by terminals of serotonin (5-HT) and norepinephrine (NE) neurons arising mostly from the brain stem, but also from intrinsic spinal neurons. Even after long-term spinal transection (chronic spinal), significant amounts (10%) of 5-HT and NE (monoamines) remain caudal to the injury. To determine the role of such endogenous monoamines, we blocked their action with monoamine receptor antagonists and measured changes in the sodium currents and firing in motoneurons. We focused on persistent sodium currents (Na PIC) and sodium spike properties because they are critical for enabling repetitive firing in motoneurons and are facilitated by monoamines. Intracellular recordings were made from motoneurons in the sacrocaudal spinal cord of normal and chronic spinal rats (2 mo postsacral transection) with the whole sacrocaudal cord acutely removed and maintained in vitro (cords from normal rats termed acute spinal). Acute and chronic spinal rats had TTX-sensitive Na PICs that were respectively 0.62 +/- 0.76 and 1.60 +/- 1.04 nA, with mean onset voltages of -63.0 +/- 5.6 and -64.1 +/- 5.4 mV, measured with slow voltage ramps. Application of 5-HT2A, 5-HT2C, and alpha1-NE receptor antagonists (ketanserin, RS 102221, and WB 4101, respectively) significantly reduced the Na PICs, and a combined application of these three monoamine antagonists completely eliminated the Na PIC, in both acute and chronic spinal rats. Likewise, reduction of presynaptic transmitter release (including 5-HT and NE) with long-term application of cadmium also eliminated the Na PIC. Associated with the elimination of the Na PIC in monoamine antagonists, the motoneurons lost their ability to fire during slow current ramps. At this point, the spike evoked by antidromic stimulation was not affected, suggesting that activation of the transient sodium current was not impaired. However, the spike evoked after a slow ramp depolarization was slightly reduced in height and rate-of-rise, suggesting decreased sodium channel availability as a result of increased channel inactivation. These results suggest that endogenous monoamine receptor activation is critical for enabling the Na PIC and decreasing sodium channel inactivation, ultimately enabling steady repetitive firing in both normal and chronic spinal rats.
Collapse
Affiliation(s)
- P J Harvey
- Centre for Neuroscience, University of Alberta, Edmonton, AB, T6G 2S2, Canada
| | | | | | | |
Collapse
|
22
|
Harvey PJ, Li X, Li Y, Bennett DJ. 5-HT2 receptor activation facilitates a persistent sodium current and repetitive firing in spinal motoneurons of rats with and without chronic spinal cord injury. J Neurophysiol 2006; 96:1158-70. [PMID: 16707714 PMCID: PMC5726401 DOI: 10.1152/jn.01088.2005] [Citation(s) in RCA: 154] [Impact Index Per Article: 8.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023] Open
Abstract
We examined the modulation of persistent inward currents (PICs) by serotonin (5-HT) in spinal motoneurons of normal and chronic spinal rats. PICs are composed of both a TTX-sensitive persistent sodium current (Na PIC) and a nimodipine-sensitive persistent calcium current (Ca PIC), and we focused on quantifying the Na PIC (and its action on the total PIC), which is known to be critical in enabling repetitive firing. Intracellular recordings were made from motoneurons of the whole sacrocaudal spinal cord of normal adult rats after the cord was acutely transected at the S2 spinal level (acute spinal rat condition), removed from the animal, and then maintained in vitro. In vitro motoneuron recordings were likewise made from rats that had a sacral spinal transection 2 mo previously (chronic spinal rats). In motoneurons from acute spinal rats, moderately high doses of 5-HT (> or = 10 microM), or the 5-HT2 receptor agonist DOI (> or = 30 microM), significantly increased the total PIC, hyperpolarized the PIC onset voltage, and hyperpolarized the spike threshold, whereas lower doses had no effect. Both 5-HT and DOI specifically increased the Na PIC portion of the total PIC (tested with nimodipine blocking the Ca PIC). Additionally, 5-HT, but not DOI, depolarized the resting membrane potential (Vm) and increased the input resistance (Rm) in a dose-dependent manner. Therefore 5-HT2 receptor activation facilitated the Na PIC, whereas other 5-HT receptors modulated Vm and Rm. Motoneurons of chronic spinal rats responded to 5-HT and DOI in the same way, but with larger responses and at much lower doses (0.3-1 microM), thus exhibiting a 30-fold supersensitivity to 5-HT. Specifically the Na PIC was supersensitive to 5-HT2 receptor activation with DOI. Also, Rm and Vm were supersensitive to 5-HT. Consistent with the known critical role of the Na PIC in repetitive firing, enhancement of the Na PIC by DOI or 5-HT facilitated the repetitive firing evoked by steady current injection and enabled repetitive firing in a subpopulation of motoneurons of acute spinal rats that were initially unable to produce sustained repetitive firing. We suggest that after spinal transection, residual endogenous spinal sources of 5-HT help facilitate the Na PIC and repetitive firing. With chronic injury, the developed 5-HT supersensitivity more than compensates for lost brain stem 5-HT, so that the Na PIC is large and motoneurons are very excitable, thus contributing to spasticity.
Collapse
Affiliation(s)
- P J Harvey
- Centre for Neuroscience, University of Alberta, Edmonton, Alberta, Canada T6G 2S2
| | | | | | | |
Collapse
|
23
|
Harvey PJ, Li Y, Li X, Bennett DJ. Persistent sodium currents and repetitive firing in motoneurons of the sacrocaudal spinal cord of adult rats. J Neurophysiol 2005; 96:1141-57. [PMID: 16282206 PMCID: PMC5726388 DOI: 10.1152/jn.00335.2005] [Citation(s) in RCA: 129] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022] Open
Abstract
Months after sacral spinal transection in rats (chronic spinal rats), motoneurons below the injury exhibit large, low-threshold persistent inward currents (PICs), composed of persistent sodium currents (Na PICs) and persistent calcium currents (Ca PICs). Here, we studied whether motoneurons of normal adult rats also exhibited Na and Ca PICs when the spinal cord was acutely transected at the sacral level (acute spinal rats) and examined the role of the Na PIC in firing behavior. Intracellular recordings were obtained from motoneurons of acute and chronic spinal rats while the whole sacrocaudal spinal cord was maintained in vitro. Compared with chronic spinal rats, motoneurons of acute spinal rats were more difficult to activate because the input resistance was 22% lower and resting membrane potential was hyperpolarized 4.1 mV further below firing threshold (-50.9 +/- 6.2 mV). In acute spinal rats, during a slow voltage ramp, a PIC was activated subthreshold to the spike (at -57.2 +/- 5.0 mV) and reached a peak current of 1.11 +/- 1.21 nA. This PIC was less than one-half the size of that in chronic spinal rats (2.79 +/- 0.94 nA) and usually was not large enough to produce bistable behavior (plateau potentials and self-sustained firing not present), unlike in chronic spinal rats. The PIC was composed of two components: a TTX-sensitive Na PIC (0.44 +/- 0.36 nA) and a nimodipine-sensitive Ca PIC (0.78 +/- 0.82 nA). Both were smaller than in chronic spinal rats (but with similar Na/Ca ratio). The presence of the Na PIC was critical for normal repetitive firing, because no detectable Na PIC was found in the few motoneurons that could not fire repetitively during a slow ramp current injection and motoneurons that had large Na PICs more readily produced repetitive firing and had lower minimum firing rates compared with neurons with small Na PICs. Furthermore, when the Na PIC was selectively blocked with riluzole, steady repetitive firing was eliminated, even though transient firing could be evoked on a rapid current step and the spike itself was unaffected. In summary, only small Ca and Na PICs occur in acute spinal motoneurons, but the Na PIC is essential for steady repetitive firing. We discuss how availability of monoamines may explain the variability in Na PICs and firing in the normal and spinal animals.
Collapse
Affiliation(s)
- P J Harvey
- Centre for Neuroscience, University of Alberta, Edmonton, Canada
| | | | | | | |
Collapse
|
24
|
Li Y, Li X, Harvey PJ, Bennett DJ. Effects of baclofen on spinal reflexes and persistent inward currents in motoneurons of chronic spinal rats with spasticity. J Neurophysiol 2005; 92:2694-703. [PMID: 15486423 DOI: 10.1152/jn.00164.2004] [Citation(s) in RCA: 74] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022] Open
Abstract
In the months after spinal cord injury, motoneurons develop large voltage-dependent persistent inward currents (PICs) that cause sustained reflexes and associated muscle spasms. These muscle spasms are triggered by any excitatory postsynaptic potential (EPSP) that is long enough to activate the PICs, which take > 100 ms to activate. The PICs are composed of a persistent sodium current (Na PIC) and a persistent calcium current (Ca PIC). Considering that Ca PICs have been shown in other neurons to be inhibited by baclofen, we tested whether part of the antispastic action of baclofen was to reduce the motoneuron PICs as opposed to EPSPs. The whole sacrocaudal spinal cord from acute spinal rats and spastic chronic spinal rats (with sacral spinal transection 2 mo previously) was studied in vitro. Ventral root reflexes were recorded in response to dorsal root stimulation. Intracellular recordings were made from motoneurons, and slow voltage ramps were used to measure PICs. Chronic spinal rats exhibited large monosynaptic and long-lasting polysynaptic ventral root reflexes, and motoneurons had associated large EPSPs and PICs. Baclofen inhibited these reflexes at very low doses with a 50% inhibition (EC50) of the mono- and polysynaptic reflexes at 0.26 +/- 0.07 and 0.25 +/- 0.09 (SD) microM, respectively. Baclofen inhibited the monosynaptic reflex in acute spinal rats at even lower doses (EC50 = 0.18 +/- 0.02 microM). In chronic (and acute) spinal rats, all reflexes and EPSPs were eliminated with 1 microM baclofen with little change in motoneuron properties (PICs, input resistance, etc), suggesting that baclofen's antispastic action is presynaptic to the motoneuron. Unexpectedly, in chronic spinal rats higher doses of baclofen (20-30 microM) significantly increased the total motoneuron PIC by 31.6 +/- 12.4%. However, the Ca PIC component (measured in TTX to block the Na PIC) was significantly reduced by baclofen. Thus baclofen increased the Na PIC and decreased the Ca PIC with a net increase in total PIC. By contrast, when a PIC was induced by 5-HT (10-30 microM) in motoneurons of acute spinal rats, baclofen (20-30 microM) significantly decreased the PIC by 38.8 +/- 25.8%, primarily due to a reduction in the Ca PIC (measured in TTX), which dominated the total PIC in these acute spinal neurons. In summary, baclofen does not exert its antispastic action postsynaptically at clinically achievable doses (< 1 microM), and at higher doses (10-30 microM), baclofen unexpectedly increases motoneuron excitability (Na PIC) in chronic spinal rats.
Collapse
Affiliation(s)
- Y Li
- Centre for Neuroscience, 513 Heritage Medical Research Centre, University of Alberta, Edmonton, Alberta T6G 2S2, Canada
| | | | | | | |
Collapse
|
25
|
Abstract
Over the months following sacral spinal cord transection in adult rats, a pronounced spasticity syndrome emerges in the affected tail musculature, where long-lasting muscle spasms can be evoked by low-threshold afferent stimulation (termed long-lasting reflex). To develop an in vitro preparation to examine the neuronal mechanisms underlying spasticity, we removed the whole sacrocaudal spinal cord of these spastic chronic spinal rats (>1 mo after S(2) sacral spinal transection) and maintained it in artificial cerebral spinal fluid in a recording chamber. The ventral roots were mounted on monopolar recording electrodes in grease, and the reflex responses to dorsal root stimulation were recorded and compared with the reflexes seen in the awake chronic spinal rat. When the dorsal roots were stimulated with a single pulse, a long-lasting reflex occurred in the ventral roots, with identical characteristics to the long-lasting reflex in the awake spastic rat tail. The reflex response was low threshold (T), short latency, long duration ( approximately 2 s), and enhanced by repeated stimulation. Brief high-frequency stimulation trains (0.5 s, 100 Hz, 1.5 x T) evoked even longer duration responses (5-10 s), with repeated bursts of activity that were similar to the repeated muscle spasms evoked in awake rats with stimulation trains or manual skin stimulation. Stimulation of a given dorsal root evoked long-lasting reflexes in both the ipsilateral and contralateral ventral roots. Long-lasting reflexes did not occur in the sacrocaudal spinal cord of acute spinal rats (S(2) transection), which is similar to the areflexia seen in awake acute spinal rats. However, long-lasting reflexes could be made to occur in the acute spinal rat by altering K(+) (7 mM) or Mg(2+) (0 mM) concentrations, or by application of high doses of the neuromodulators norepinephrine (NE, >20 microM) or serotonin (5-HT, >20 microM). In chronic spinal rats, much lower doses of these neuromodulators (0.1 microM) enhanced the long-lasting reflexes, suggesting a denervation supersensitivity to 5-HT and NE following injury. Higher doses of NE or 5-HT produced a paradoxical inhibition of the long-lasting reflexes. The high dose inhibition by NE was mimicked by the alpha(2)-adrenergic receptor agonist clonidine but not the alpha(1)-adrenergic receptor agonist methoxamine. In summary, the sacral spinal in vitro preparation offers a new approach to the study of spinal cord injury and analysis of antispastic drugs.
Collapse
Affiliation(s)
- Y Li
- Centre for Neuroscience, University of Alberta, Edmonton, Alberta T6G 2S2, Canada
| | | | | | | |
Collapse
|
26
|
Abstract
Following chronic sacral spinal cord transection in rats the affected tail muscles exhibit marked spasticity, with characteristic long-lasting tail spasms evoked by mild stimulation. The purpose of the present paper was to characterize the long-lasting reflex seen in tail muscles in response to electrical stimulation of the tail nerves in the awake spastic rat, including its development with time and relation to spasticity. Before and after sacral spinal transection, surface electrodes were placed on the tail for electrical stimulation of the caudal nerve trunk (mixed nerve) and for recording EMG from segmental tail muscles. In normal and acute spinal rats caudal nerve trunk stimulation evoked little or no EMG reflex. By 2 wk after injury, the same stimulation evoked long-lasting reflexes that were 1) very low threshold, 2) evoked from rest without prior EMG activity, 3) of polysynaptic latency with >6 ms central delay, 4) about 2 s long, and 5) enhanced by repeated stimulation (windup). These reflexes produced powerful whole tail contractions (spasms) and developed gradually over the weeks after the injury (≤52 wk tested), in close parallel to the development of spasticity. Pure low-threshold cutaneous stimulation, from electrical stimulation of the tip of the tail, also evoked long-lasting spastic reflexes, not seen in acute spinal or normal rats. In acute spinal rats a strong C-fiber stimulation of the tip of the tail (20 × T) could evoke a weak EMG response lasting about 1 s. Interestingly, when this C-fiber stimulation was used as a conditioning stimulation to depolarize the motoneuron pool in acute spinal rats, a subsequent low-threshold stimulation of the caudal nerve trunk evoked a 300–500 ms long reflex, similar to the onset of the long-lasting reflex in chronic spinal rats. A similar conditioned reflex was not seen in normal rats. Thus there is an unusually long low-threshold polysynaptic input to the motoneurons (pEPSP) that is normally inhibited by descending control. This pEPSP is released from inhibition immediately after injury but does not produce a long-lasting reflex because of a lack of motoneuron excitability. With chronic injury the motoneuron excitability is increased markedly, and the pEPSP then triggers sustained motoneuron discharges associated with long-lasting reflexes and muscle spasms.
Collapse
Affiliation(s)
- D J Bennett
- Centre for Neuroscience, University of Alberta, Edmonton, Alberta T6G 2S2, Canada.
| | | | | | | | | |
Collapse
|
27
|
Cheng J, Jovanovic K, Aoyagi Y, Bennett DJ, Han Y, Stein RB. Differential distribution of interneurons in the neural networks that control walking in the mudpuppy (Necturus maculatus) spinal cord. Exp Brain Res 2002; 145:190-8. [PMID: 12110959 DOI: 10.1007/s00221-002-1102-0] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/17/2001] [Accepted: 02/27/2002] [Indexed: 11/27/2022]
Abstract
Locomotor behavior is believed to be produced by interneuronal networks that are intrinsically organized to generate the underlying complex spatiotemporal patterns. In order to study the temporal correlation between the firing of individual interneurons and the pattern of locomotion, we utilized the spinal cord-forelimb preparation from the mudpuppy, in which electrophysiological recordings of neuronal activity were achieved during walking-like movement of the forelimb induced by bath application of N-methyl- D-aspartate (NMDA). Intra- and extracellular recordings were made in the C2 and C3 segments of the spinal cord. These segments contain independent flexor and extensor centers for the forelimb movement about the elbow joint during walking. Among the 289 cells recorded in the intermediate gray matter (an area between the ventral and dorsal horns) of the C2 and C3 segments, approximately 40% of the cells fired rhythmically during "walking." The firing rates were 6.4+/-0.4 impulses/s (mean +/- SE). These rhythmically active cells were classified into four types based on their phase of activity during a normalized step cycle. About half the rhythmic cells fired in phase with either the flexor (F) or extensor (E) motoneurons. The rest fired in the transitions between the two phases (F-->E and E-->F). Longitudinal distributions of the four types of interneurons along the spinal cord were in agreement with observations that revealed distinct but overlapping flexor and extensor centers for walking. Some cells triggered short-latency responses in the elbow flexor or extensor muscles and may be last-order interneurons. These observations suggest that there is a differential distribution of phase-specific interneurons in the central pattern generator of the mudpuppy spinal cord for walking.
Collapse
Affiliation(s)
- J Cheng
- Department of Neurological Surgery, University of Louisville School of Medicine, Louisville, KY 40202, USA
| | | | | | | | | | | |
Collapse
|
28
|
Anderson A, Belelli D, Bennett DJ, Buchanan KI, Casula A, Cooke A, Feilden H, Gemmell DK, Hamilton NM, Hutchinson EJ, Lambert JJ, Maidment MS, McGuire R, McPhail P, Miller S, Muntoni A, Peters JA, Sansbury FH, Stevenson D, Sundaram H. Alpha-amino acid phenolic ester derivatives: novel water-soluble general anesthetic agents which allosterically modulate GABA(A) receptors. J Med Chem 2001; 44:3582-91. [PMID: 11606122 DOI: 10.1021/jm010903i] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Abstract
In the search for a novel water-soluble general anesthetic agent the activity of an alpha-amino acid phenolic ester lead, identified from patent literature, was markedly improved. In addition to improving in vivo activity in mice, good in vitro activity at GABA(A) receptors was also conferred. Within the series of compounds good enantioselectivity for both in vitro and in vivo activity was found, supporting a protein-mediated mechanism of action for anesthesia involving allosteric modulation of GABA(A) receptors. alpha-Amino acid phenolic ester 19, as the hydrobromide salt Org 25435, was selected for clinical evaluation since it retained the best overall anesthetic profile coupled with improved stability and water solubility. In the clinic it proved to be an effective intravenous anesthetic in man with rapid onset of and recovery from anesthesia at doses of 3 and 4 mg/kg.
Collapse
Affiliation(s)
- A Anderson
- Organon Research, Newhouse, Lanarkshire ML1 5SH, Scotland, U.K
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |
Collapse
|
29
|
Abstract
Intracellular recordings were made from sacrocaudal tail motoneurons of acute and chronic spinal rats to examine whether plateau potentials contribute to spasticity associated with chronic injury. The spinal cord was transected at the S2 level, causing, over time, exaggerated long-lasting reflexes (hyperreflexia) associated with a general spasticity syndrome in the tail muscles of chronic spinal rats (1-5 mo postinjury). The whole sacrocaudal spinal cord of chronic or acute spinal rats was removed and maintained in vitro in normal artificial cerebral spinal fluid (ACSF). Hyperreflexia in chronic spinal rats was verified by recording the long-lasting ventral root responses to dorsal root stimulation in vitro. The intrinsic properties of sacrocaudal motoneurons were studied using intracellular injections of slow triangular current ramps or graded current pulses. In chronic spinal rats, the current injection triggered sustained firing and an associated sustained depolarization (plateau potential; 34/35 cells; mean, 5.5 mV; duration >5 s; normal ACSF). The threshold for plateau initiation was low and usually corresponded to an acceleration in the membrane potential just before recruitment. After recruitment and plateau activation, the firing rate changed linearly with current during the slow ramps [63% of cells had a linear frequency-current (F-I) relation] despite the presence of the plateau. The persistent inward current (I(PIC)) producing the plateau and sustained firing was estimated to be on average 0.8 nA as determined by the reduction in injected current needed to stop the sustained firing [DeltaI = -0.8 +/- 0.6 (SD) nA], compared with the current needed to start firing (I = 1.7 +/- 1.5 nA; 47% reduction). In motoneurons of acute spinal rats, plateaus were rarely seen (3/22), although they could be made to occur with bath application of serotonin. In motoneurons of chronic spinal rats there were no significant changes in the mean passive input resistance, rheobase or amplitude of the spike afterhyperpolarization (AHP) as compared with acute spinal rats. However, there were significant increases in AHP duration and initial firing rate at recruitment and decreases in minimum firing rate and F-I slope. We suggest that the higher initial firing rate resulted from the plateau activation at recruitment and the lower F-I slope resulted from an increase in active conductance during firing, due to I(PIC). Brief dorsal root stimulation also triggered a plateau and sustained discharge (long-lasting reflexes; 2-5 s) in motoneurons of chronic (but not acute) spinal rats. When the plateau was eliminated by a hyperpolarizing current bias, the reflex response was significantly shortened (to 1 s). Thus plateaus contributed substantially to the long-lasting reflexes in vitro and therefore should contribute significantly to the corresponding exaggerated reflexes and spasticity in awake chronic spinal rats.
Collapse
Affiliation(s)
- D J Bennett
- Division of Neuroscience, University of Alberta, Edmonton, Alberta T6G 2S2, Canada.
| | | | | |
Collapse
|
30
|
Abstract
Motor units of segmental tail muscles were recorded in awake rats following acute (1-2 days) and chronic (>30 days) sacral spinal cord transection to determine whether plateau potentials contributed to sustained motor-unit discharges after injury. This study was motivated by a companion in vitro study that indicated that after chronic spinal cord injury, the tail motoneurons of the sacrocaudal spinal cord exhibit persistent inward currents (I(PIC)) that cause intrinsically sustained depolarizations (plateau potentials) and firing (self-sustained firing). Importantly, in this companion study, the plateaus were fully activated at recruitment and subsequently helped sustain the firing without causing abrupt nonlinearities in firing. That is, after recruitment and plateau activation, the firing rate was modulated relatively linearly with injected current and therefore provided a good approximation of the input to the motoneuron despite the plateau. Thus in the present study, pairs of motor units were recorded simultaneously from the same muscle, and the firing rate (F) of the lowest-threshold unit (control unit) was used as an estimate of the synaptic input to both units. We then examined whether firing of the higher-threshold unit (test unit) was intrinsically maintained by a plateau, by determining whether more synaptic input was required to recruit the test unit than to maintain its firing. The difference in the estimated synaptic input at recruitment and de-recruitment of the test unit (i.e., change in control unit rate, DeltaF) was taken as an estimate of the plateau current (I(PIC)) that intrinsically sustained the firing. Slowly graded manual skin stimulation was used to recruit and then de-recruit the units. The test unit was recruited when the control unit rate was on average 17.8 and 18.9 Hz in acute and chronic spinal rats, respectively. In chronic spinal rats, the test unit was de-recruited when the control unit rate (re: estimated synaptic input) was significantly reduced, compared with at recruitment (DeltaF = -5.5 Hz), and thus a plateau participated in maintaining the firing. In the lowest-threshold motor units, even a brief stimulation triggered very long-lasting firing (seconds to hours; self-sustained firing). Higher-threshold units required continuous stimulation (or a spontaneous spasm) to cause firing, but again more synaptic input was needed to recruit the unit than to maintain its firing (i.e., plateau present). In contrast, in acute spinal rats, the stimulation did not usually trigger sustained motor-unit firing that could be attributed to plateaus because DeltaF was not significantly different from zero. These results indicate that plateaus play an important role in sustaining motor-unit firing in awake chronic spinal rats and thus contribute to the hyperreflexia and hypertonus associated with chronic injury.
Collapse
Affiliation(s)
- D J Bennett
- Division of Neuroscience, University of Alberta, Edmonton, Alberta T6G 2S2, Canada.
| | | | | | | |
Collapse
|
31
|
Abstract
This paper compares the activity of hindlimb motor units from muscles mainly composed of fast-twitch muscle fibers (medial and lateral gastrocnemius: MG/LG, tibialis anterior: TA) to motor units from a muscle mainly composed of slow-twitch muscle fibers (soleus: SOL) during unrestrained walking in the conscious rat. Several differences in the activation profiles of motor units from these two groups of muscles were observed. For example, motor units from fast muscles (e.g., MG/LG and TA) fired at very high mean frequencies of discharge, ranging from 60 to 100 Hz, and almost always were recruited with initial doublets or triplets, i.e., initial frequencies >/=100 Hz. In contrast, the majority of SOL units fired at much lower mean rates of discharge, approximately 30 Hz, and had initial frequencies of only 30-60 Hz (i.e., there were no initial doublets/triplets >/=100 Hz). Thus the presence of initial doublet or triplets was dependent on the intrinsic properties of the motor unit, i.e., faster units were recruited with a doublet/triplet more often than slower units. Moreover, in contrast to units from the slow SOL muscle, the activity of single motor units from the fast MG/LG muscle, especially units recruited midway or near the end of a locomotor burst, was unrelated to the activity of the remainder of the motoneuron pool, as measured by the corresponding gross-electromyographic (EMG) signal. This dissociation of activity was suggested to arise from a compartmentalized recruitment of the MG/LG motoneuron pool by the rhythm-generating networks of the spinal cord. In contrast, when comparing the rate modulation of simultaneously recorded motor units within a single LG muscle compartment, the frequency profiles of unit pairs were modulated in a parallel fashion. This suggested that the parent motoneurons were responsive to changes in synaptic inputs during unrestrained walking, unlike the poor rate modulation that occurs during locomotion induced from brain stem stimulation. In summary, data from this study provide evidence that the firing behavior of motor units during unrestrained walking is influenced by both the intrinsic properties of the parent motoneuron and by synaptic inputs from the locomotor networks of the spinal cord. In addition, it also provides the first extensive description of motor-unit activity from different muscles during unrestrained walking in the conscious rat.
Collapse
Affiliation(s)
- M Gorassini
- Department of Medical Physiology, Section of Neurophysiology, University of Copenhagen, 2200 Copenhagen N, Denmark
| | | | | | | | | |
Collapse
|
32
|
Abstract
PURPOSE To determine whether G-protein-mediated inhibition of secretion by met-enkephalin involves cyclic adenosine monophosphate (cAMP)-dependent events and to identify the G proteins that couple met-enkephalin to inhibition of lacrimal secretion. METHODS Secretion of protein was measured in 3-day primary cultures of rabbit lacrimal acini exposed to vehicle, the cholinergic agonist carbachol (Cch), the beta-adrenergic agonist isoproterenol (Isop), vasoactive intestinal peptide (VIP), or forskolin (FSK) with or without the enkephalin analog D-ala2-met-enkephalinamide (DALA). In separate experiments, cells were pretreated with pertussis toxin or polyclonal antibodies against the alpha subunits of Gi/Go to determine the physiologic role of G proteins in met-enkephalin inhibition of the release of lacrimal protein. Adenylyl cyclase (AC) activity was measured by a cAMP-dependent protein kinase binding assay in lacrimal membranes in response to the same agonists used in the secretion studies. RESULTS Cch resulted in a significant increase in protein release from cultured lacrimal acini. Increased secretion also occurred with Isop, VIP, and FSK. Cch- and Isop-stimulated secretion was inhibited by DALA to near-basal values. However, DALA did not inhibit VIP- or FSK-stimulated secretion. The inhibitory effect of DALA on Cch and Isop stimulation of secretion was reversed by pertussis toxin. Inhibition of Cch-stimulated secretion was blocked by antibody specific to a common peptide sequence of Gialpha1 and Gialpha2 but was not blocked by anti-Gialpha1 antibody. The inhibitory effect on Cch-stimulated secretion was also blocked by anti-Gialpha3 and anti-Goalpha. Similar experiments resulted in a reversal of DALA inhibition of beta-adrenergic stimulation of secretion by immunoneutralization of Gialpha1/2 and Goalpha but not by immunoneutralization of Gialpha1 or Gialpha3. VIP, Isop, and FSK significantly stimulated AC. However, Cch had no effect on the activity of the enzyme. In addition, DALA had no effect on AC activity under any conditions. CONCLUSIONS These results show that enkephalin inhibition of cholinergic and beta-adrenergic stimulation of secretion is mediated by Gi2, Gi3, and Go. The effector coupled by the G proteins is not AC. However, we suggest a role for met-enkephalin in G-protein-coupled modulation of ion channels important for cholinergic and beta-adrenergic stimulation of lacrimal secretion.
Collapse
Affiliation(s)
- M A Meneray
- Department of Physiology, Louisiana State University Medical Center, New Orleans 70119, USA.
| | | | | |
Collapse
|
33
|
Boyd RE, Press JB, Rasmussen CR, Raffa RB, Codd EE, Connelly CD, Bennett DJ, Kirifides AL, Gardocki JF, Reynolds B, Hortenstein JT, Reitz AB. Alpha(2) adrenoceptor agonists as potential analgesic agents. 1. (Imidazolylmethyl)oxazoles and -thiazoles. J Med Chem 1999; 42:5064-71. [PMID: 10602691 DOI: 10.1021/jm990005a] [Citation(s) in RCA: 17] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
A series of (imidazolylmethyl)oxazoles and -thiazoles were prepared and evaluated as alpha(2) adrenoceptor agonists. These compounds were also tested in in vivo paradigms that are predictive of analgesic activity. Variations in both the imidazole and thiazole portions of the molecule were investigated. Some of the more potent compounds such as 22, 26, 45, and 53 displayed alpha(2) receptor binding in the 10-20 nM range and also had significant antinociceptive activity in the mouse abdominal irritant test (MAIT).
Collapse
Affiliation(s)
- R E Boyd
- Drug Discovery Division, The R. W. Johnson Pharmaceutical Research Institute, Welsh and McKean Roads, Spring House, Pennsylvania 19477, USA
| | | | | | | | | | | | | | | | | | | | | | | |
Collapse
|
34
|
Gorassini M, Bennett DJ, Kiehn O, Eken T, Hultborn H. Activation patterns of hindlimb motor units in the awake rat and their relation to motoneuron intrinsic properties. J Neurophysiol 1999; 82:709-17. [PMID: 10444668 DOI: 10.1152/jn.1999.82.2.709] [Citation(s) in RCA: 70] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022] Open
Abstract
The activity of hindlimb motor units from the lateral gastrocnemius and tibialis anterior muscles in the awake rat was compared during locomotion and during slow, sinusoidal muscle stretch. The majority of units were activated with high initial frequencies and often commenced firing with an initial doublet or triplet, even when activated by slow muscle stretch. The high firing rates at recruitment occurred without jumps in the firing rates of other concurrently activated units, the firing rate profiles of which were used as a measure of the net synaptic drive onto the motoneuronal pool. This suggested that the sharp recruitment jumps were not due to an abrupt increase in synaptic drive but rather due to intrinsic properties of the motoneuron. In addition, motor units that were activated phasically by the muscle stretch fired more action potentials during muscle shortening than during muscle lengthening, resulting in rightwardly skewed, asymmetrical firing profiles. In contrast, when the same units fired tonically during the imposed muscle stretch, the frequency profiles were modulated symmetrically and no nonlinearities were observed. Tonically firing units were modulated symmetrically throughout a wide range of firing frequencies, and discrete jumps in rate (i.e., bistable firing) were not observed. The sharp recruitment jumps during locomotion and muscle stretch are proposed to have resulted from the additional depolarization produced by the activation of plateau potentials at recruitment. Likewise, the sustained activation of plateaus subsequent to recruitment may have produced the prolonged firing of the motor units during sinusoidal muscle stretch.
Collapse
Affiliation(s)
- M Gorassini
- Section of Neurophysiology, Department of Medical Physiology, University of Copenhagen, Copenhagen 2200N, Denmark
| | | | | | | | | |
Collapse
|
35
|
Abstract
This paper reports the result of a lexical decision experiment in which the primes were either directly related to their targets, mediated, or unrelated. Mediated primes are indirectly related to their targets through a single connecting link (e.g., PASTURE-COW-MILK). Older and younger adult subjects responded to each letter string in a continuous lexical decision task, deciding whether each string was a word or a nonword. The results indicated that both younger and older subjects benefited from the mediated primes, as well as from the directly related primes. The results are discussed in relation to issues of age changes in processing speed.
Collapse
Affiliation(s)
- D J Bennett
- Department of Psychology, Simmons College, Boston, MA 02115, USA.
| | | |
Collapse
|
36
|
Abstract
We have investigated sacral spinal cord lesions in rats with the goal of developing a rat model of muscular spasticity that is minimally disruptive, not interfering with bladder, bowel, or hindlimb locomotor function. Spinal transections were made at the S2 sacral level and, thus, only affected the tail musculature. After spinal transection, the muscles of the tail were inactive for 2 weeks. Following this initial period, hypertonia, hyperreflexia, and clonus developed in the tail, and grew more pronounced with time. These changes were assessed in the awake rat, since the tail is readily accessible and easy to manipulate. Muscle stretch or cutaneous stimulation of the tail produced muscle spasms and marked increases in muscle tone, as measured with force and electromyographic recordings. When the tail was unconstrained, spontaneous or reflex induced flexor and extensor spasms coiled the tail. Movement during the spasms often triggered clonus in the end of the tail. The tail hair and skin were extremely hyperreflexive to light touch, withdrawing quickly at contact, and at times clonus could be entrained by repeated contact of the tail on a surface. Segmental tail muscle reflexes, e.g., Hoffman reflexes (H-reflexes), were measured before and after spinalization, and increased significantly 2 weeks after transection. These results suggest that sacral spinal rats develop symptoms of spasticity in tail muscles with similar characteristics to those seen in limb muscles of humans with spinal cord injury, and thus provide a convenient preparation for studying this condition.
Collapse
Affiliation(s)
- D J Bennett
- Division of Neuroscience, University of Alberta, Edmonton, Alberta, Canada
| | | | | | | | | | | |
Collapse
|
37
|
Abstract
Intracellular recordings were made from hindlimb motoneurons in decerebrate cats to study how synaptic inputs could affect the threshold at which plateau potentials are activated with current injections through the recording microelectrode in the cell body. This study was prompted by recent evidence that the noninactivating inward currents that regeneratively produce the plateau potentials arise (partly) from dendritic conductances, which may be relatively more accessible to synaptic input than to current injected into the soma. Initially, cells were studied by injecting a slow triangular current ramp intracellularly to determine the threshold for activation of the plateau. In cells where the sodium spikes were blocked with intracellular QX314, plateau activation was readily seen as a sudden jump in membrane potential, which was not directly reversed as the current was decreased. With normal spiking, the plateau activation (the noninactivating inward current) was reflected by a steep and sustained jump in firing rate that was not directly reversed as the current was decreased. Importantly, the threshold for plateau activation (at 34 Hz on average) was significantly above the recruitment level (13 Hz on average). When tonic synaptic excitation [excitatory postsynaptic potentials (EPSPs)] was provided either by stretching the triceps surae muscle or by stimulating its nerve at a high frequency, the threshold for plateau activation by intracellular current injection was significantly lowered (by 12 Hz or 5.8 mV on average, without and with QX314, respectively). Conversely, tonic synaptic inhibition [inhibitory postsynaptic potentials (IPSPs)], provided by appropriate nerve stimulation, significantly raised the plateau threshold (by 19 Hz or 7.6 mV on average). These effects were graded with the intensity of tonic EPSPs and IPSPs. Strong enough EPSPs brought the plateau threshold down sufficiently that it was activated by the intracellular current soon after recruitment. A further increase in tonic EPSPs recruited the cell directly, and in this case the plateau was activated at or before recruitment. The finding that synaptic excitation can produce plateau activation below the recruitment level is of importance for the interpretation of its function. With this low-threshold activation, the plateau potentials are likely important in securing an effective recruitment to frequencies that produce significant force generation and would subsequently have no further affect on the frequency modulation, other than to provide a steady depolarizing bias that would help to sustain firing (cf. self-sustained firing). Additional jumps in frequency after recruitment (i.e., bistable firing) would not be expected.
Collapse
Affiliation(s)
- D J Bennett
- Department of Medical Physiology, The Panum Institute, University of Copenhagen, Blegdamsvej 3, Copenhagen N, Denmark
| | | | | | | |
Collapse
|
38
|
Abstract
In this study we present a fast and simple technique to decerebrate rats. By injecting polyvinylsiloxane (PVS) into both common carotid arteries we occluded the circle of Willis and all cerebral arteries, thereby completely interrupting the blood supply to the cerebrum. High viscosity PVS was used so that it only entered the large arteries, and did not pass into the capillary beds. This procedure reliably resulted in an anemic decerebration, without interfering with the blood supply to the brainstem. Long-term survival was achieved by reducing intracranial pressure by the application of steroids and/or opening the skull.
Collapse
Affiliation(s)
- K Fouad
- Division of Neuroscience, University of Alberta, Edmonton, Canada
| | | |
Collapse
|
39
|
Abstract
Cat hindlimb motoneurons possess noninactivating voltage-gated inward currents that can, under appropriate conditions, regeneratively produce sustained increments in depolarization and firing of the cell (i.e., plateau potentials). Recent studies in turtle dorsal horn neurons and motoneurons indicate that facilitation of plateaus occurs with repeated plateau activation (decreased threshold and increased duration; this phenomenon is referred to as warm-up). The purpose of the present study was to study warm-up in cat motoneurons. Initially, cells were studied by injecting a slow triangular current ramp intracellularly to determine the threshold for activation of the plateau. In cells where the sodium spikes were blocked with intracellular QX314, plateau activation was readily seen as a sudden jump in membrane potential, which was not directly reversed as the current was decreased (cf. hysteresis). With normal spiking, the plateau activation (the noninactivating inward current) was reflected by a steep and sustained jump in firing rate, which was not directly reversed as the current was decreased (hysteresis). Repetitive plateau activation significantly lowered the plateau activation threshold in 83% of cells (by on average 5 mV and 11 Hz with and without QX314, respectively). This interaction between successive plateaus (warm-up) occurred when tested with 3- to 6-s intervals; no interaction occurred at times >20 s. Plateaus initiated by synaptic activation from muscle stretch were also facilitated by repetition. Repeated slow muscle stretches that produced small phasic responses when a cell was hyperpolarized with intracellular current bias produced a larger and more prolonged responses (plateau) when the bias was removed, and the amplitude and duration of this response grew with repetition. The effects of warm-up seen with intracellular recordings during muscle stretch could also be recorded extracellularly with gross electromyographic (EMG) recordings. That is, the same repetitive stretch as above produced a progressively larger and more prolonged EMG response. Warm-up may be a functionally important form of short-term plasticity in motoneurons that secures efficient motor output once a threshold level is reached for a significant period. Finally, the finding that warm-up can be readily observed with gross EMG recordings will be useful in future studies of plateaus in awake animals and humans.
Collapse
Affiliation(s)
- D J Bennett
- Department of Medical Physiology, The Panum Institute, University of Copenhagen, Blegdamsvej 3, Copenhagen N, Denmark
| | | | | | | |
Collapse
|
40
|
Meneray MA, Fields TY, Bennett DJ. Gi2 and Gi3 couple met-enkephalin to inhibition of lacrimal secretion. Invest Ophthalmol Vis Sci 1998; 39:1339-45. [PMID: 9660481] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023] Open
Abstract
PURPOSE The intent of this study was to identify the pertussis toxin-sensitive G proteins that couple met-enkephalin to the inhibition of cholinergically stimulated secretion in rabbit lacrimal gland acini. METHODS The authors detected G proteins in membranes from freshly isolated glands, freshly isolated acini, and cultured lacrimal acini from rabbits by sodium dodecyl sulfate-polyacrylamide gel electrophoresis and immunoblotting. Antibodies against the alpha subunits of Gi1, Gi1 and Gi2, or Gi3 were used in cultured acini permeabilized by streptolysin-O to determine the role of the G proteins in met-enkephalin inhibition of cholinergic stimulation of lacrimal acinar protein release. RESULTS Western blot analysis showed the presence of the alpha subunits of Gi2 and Gi3, but not Gi1, in all three membrane preparations. The met-enkephalin analog D-Ala2-methionine enkephalinamide (DALA) inhibited cholinergic stimulation of secretion by cultured rabbit acinar cells to near basal levels. Inhibition of secretion by DALA was blocked by insertion of antibody to a peptide sequence common to Gialpha1 and Gialpha2, but was not blocked by antibody against a specific Gialpha1 sequence. The inhibitory effect of DALA also was blocked by antibody to a Gialpha3 sequence. At low doses of anti-Gialpha1/2 and anti-Gialpha3 in combination, the effect on reversal of inhibition was additive. However, at higher doses, the effect of the combination was no greater than the effect of either antibody alone. CONCLUSIONS These results demonstrate that met-enkephalin inhibition of cholinergic secretion is mediated by way of the pertussis toxin-sensitive G proteins Gi2 and Gi3 in cultured rabbit lacrimal acini. Because the effects of the G proteins are not additive, the intracellular events distal to G protein activation most likely converge at some point before exocytosis.
Collapse
Affiliation(s)
- M A Meneray
- Department of Physiology, Louisiana State University Medical Center, New Orleans 70119, USA
| | | | | |
Collapse
|
41
|
Meneray MA, Bennett DJ. Identification and characterization of G proteins in the mammalian lacrimal gland. Adv Exp Med Biol 1998; 438:197-203. [PMID: 9634887 DOI: 10.1007/978-1-4615-5359-5_29] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Affiliation(s)
- M A Meneray
- Department of Physiology, Louisiana State University Medical Center, New Orleans, USA
| | | |
Collapse
|
42
|
Cheng J, Stein RB, Jovanović K, Yoshida K, Bennett DJ, Han Y. Identification, localization, and modulation of neural networks for walking in the mudpuppy (Necturus maculatus) spinal cord. J Neurosci 1998; 18:4295-304. [PMID: 9592106 PMCID: PMC6792799] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023] Open
Abstract
We tested the hypothesis that the neural networks for walking in the mudpuppy can be divided into a flexor and an extensor center, each of which contains collections of interneurons localized in the vicinity of their motoneuron pools. Combining a battery of techniques, we identified and localized the elbow flexor center and its motoneuron pool in the C2 segment and the elbow extensor center and its motoneuron pool in the C3 segment. Rhythmic flexion or extension of the limb in isolation could be induced by continuous trains of current pulses of the C2 or C3 segments, respectively. Independent activation could also occur after application of glutamate receptor agonist NMDA. Part of segment C2 in isolation generated rhythmic elbow flexor bursts, whereas part of segment C3 in isolation generated rhythmic elbow extensor bursts. An isolated region spanning the C3 roots generated both flexor and extensor bursts. The step cycle was modulated in a phase-dependent manner by stimulation of the dorsal roots, the ventral roots, or either of the two centers. The effects of ventral root stimulation were removed by deafferentation to block reafferent input attributable to muscle contraction induced by the stimulation. We conclude that the neural networks for walking contain at least a flexor and an extensor generator that are localized in close apposition to the motoneuron pools, that the two centers can work independently despite the fact that there are reciprocal inhibitory interconnections between them, and that sensory input interacts with the spinal neural networks to reset the ongoing walking rhythm in a phase-dependent manner.
Collapse
Affiliation(s)
- J Cheng
- Division of Neuroscience, University of Alberta, Edmonton, Alberta, Canada T6G 2S2
| | | | | | | | | | | |
Collapse
|
43
|
Abstract
Motoneurons of invertebrates and vertebrates can continue to fire repetitively after being activated by a brief, excitatory synaptic input (self-sustained firing). This firing behavior is due to the activation of intrinsic, voltage-gated currents which produce sustained regenerative depolarizations (plateau potentials) of the cell. Examination of these intrinsic cellular properties has been performed in reduced animal preparations and it is unknown if such self-sustained firing occurs in motoneurons of the intact human. In this paper, we present evidence of this in the human by using a technique of dual motor unit recordings. Subjects were instructed to maintain a constant dorsiflexion effort, and the common synaptic input (e.g. descending drive) onto the tibialis anterior (TA) motoneuron pool was monitored by recording the firing frequency of a low threshold 'control' unit. Once the firing rate of the control unit was constant, vibration of the TA tendon recruited a second 'test' unit which continued to fire after the vibration (i.e. synaptic input) was removed, even though the firing rate of the control unit (and thus, the common drive) remained the same or decreased. Self-sustained firing of motoneurons such as this may reduce the need for prolonged synaptic input when constant muscle activation is required (e.g. for postural tone).
Collapse
Affiliation(s)
- M A Gorassini
- Division of Neuroscience, Faculty of Medicine, University of Alberta, Edmonton, Canada.
| | | | | |
Collapse
|
44
|
Abstract
PURPOSE This work was conducted to determine the effects of unilateral trigeminal ganglion ablation on lacrimal gland structure and secretory activity. METHODS Adult male New Zealand rabbits underwent unilateral thermocoagulation of the ophthalmic division of the trigeminal ganglion. Sensory denervation was affirmed by anatomic inspection of the lesion and transmission electron microscopy (TEM) of the lacrimal gland innervation. Eight to 10 days after the procedure, the intraorbital lacrimal glands were removed from both sides. To compare the physiologic competence of the intact and denervated glands, freshly isolated gland fragments from the paired intact and denervated glands were stimulated with carbachol (100 microM), isoproterenol (10 microM), phorbol-12,13-dibutyrate (PDBu, 10 microM), forskolin (40 microM), or vehicle. Total secreted protein was measured at 30 or 60 min after the establishment of baseline values. Intact and denervated glands also were examined by light and TEM, and the morphologic appearance of the acinar structures as well as the appearance of nerves innervating the gland after denervation were assessed. Similar experiments were conducted with animals that underwent unilateral superior cervical ganglionectomy. RESULTS Tissues from sensory denervated glands released significantly more protein than did tissues from innervated glands in response to in vitro stimulation by carbachol or isoproterenol but not in response to PDBu or forskolin. Microscopy showed that the acinar cells that had undergone sensory denervation showed a massive accumulation of secretory granules. The secretory granules filled the entire cytoplasmic space and displaced the ellipsoidal nuclei to the extreme periphery. Examination of segments of nerves revealed numerous unmyelinated axons, a few small-diameter myelinated axons, and a large amount of nerve degeneration after sensory denervation. In contrast to the effects of sensory denervation, sympathetic denervation did not alter either the acinar appearance or secretory responsiveness of the gland. CONCLUSION Loss of the considerable sensory innervation from the trigeminal ganglion has pronounced effects on the pharmacologic responsiveness and the structure of the lacrimal gland. The effects of sensory innervation on the gland may be mediated through two possible pathways: direct input to the gland or control of the preganglionic parasympathetic pathway.
Collapse
Affiliation(s)
- M A Meneray
- Department of Physiology and LSU Eye Center, Louisiana State University Medical Center, New Orleans 70119, USA
| | | | | | | |
Collapse
|
45
|
Abstract
Cued recall is strongly affected by the strength of the preexisting connection between the test cue and the information to be recalled, the target. In all past work, preexisting cue-to-target strength has been measured by the probability that the cue produced the target in free association. This paper presents four experiments showing that this use of such norms underestimates the strength of the connection and that a more accurate estimate can be obtained by incorporating indirect as well as direct connections in the estimate. Experiments 1 and 2 showed that in extralist cued recall both the strength and number of two-step indirect connections facilitate recall. Experiment 3 showed that three-step connections have negligible effects. Experiment 4 used an intralist task in which cue and target are first studied together, and the results showed once again that indirect connections can affect recall. In all of these experiments, indirect connections had an effect on recall that was larger when direct cue-to-target strength was weak than when it was strong. Implications for using association norms in research are described, and an algorithm for using association norms to measure cue-to-target strength is proposed.
Collapse
Affiliation(s)
- D L Nelson
- Department of Psychology, University of South Florida, Tampa 33620, USA.
| | | | | |
Collapse
|
46
|
Abstract
Three cued-recall experiments examined the effects of learning conditions and set size on recollective and automatic uses of memory. Words were studied under different conditions and had either small or large preexisting associative sets. Results based on the process-dissociation procedure showed that learning conditions and set size influenced recollective uses of memory, whereas only set size influenced automatic uses. Other results indicated that process-dissociation and direct-indirect test procedures produce similar results. The findings suggest that the relative contributions of recently acquired information and preexisting information depend on how memory is being used. Recollective uses of memory are affected by the nature of recent study and by what such study activates in long-term memory. In contrast, automatic uses of memory are more affected by what the test cue automatically activates than by what has been learned during recent study.
Collapse
Affiliation(s)
- D L Nelson
- Department of Psychology, University of South Florida, Tampa 33620, USA.
| | | | | |
Collapse
|
47
|
Abstract
This study was prompted by recent evidence for the existence of positive force feedback in feline locomotor control. Our aim was to establish some basic properties of positive force feedback in relation to load compensation, stability, intrinsic muscle properties, and interaction with displacement feedback. In human subjects, muscles acting about the wrist and ankle were activated by feedback-controlled electrical stimulation. The feedback signals were obtained from sensors monitoring force and displacement. The signals were filtered to mimic transduction by mammalian tendon organ and muscle spindle receptors. We found that when muscles under positive force feedback were loaded inertially, they responded in a stable manner with increased active force. The activation attenuated the muscle stretch (yield) that would otherwise occur in the absence of feedback. With enough positive force feedback gain, yield could actually reverse. This behavior, which we termed the affirming reaction, was reminiscent of the mammalian positive supporting reaction, a postural response elicited by contact of the foot with the ground. Muscles under positive force feedback remained stable, even when the loop gain (Gf) was set at levels of 2 or 3. In a linear system, if Gf > 1, instability occurs when the loop is closed. On further investigation, we found that Gf changed with joint angle: it declined as the load-bearing muscle actively shortened. We inferred that in closed-loop operation, the active muscles always shortened until Gf approached unity. In other words, the length-tension curve of active muscle ensures stability even when force-related excitation of motoneurons is very large. Concomitant negative displacement feedback reinforced and stabilized load compensation up to a certain gain, beyond which instability occurred. In further trials we included delays of up to 40 ms in the positive force feedback pathway, to model the delays recently described for tendon organ reflexes in cat locomotion. Contrary to expectations, this did not destabilize the loop. Indeed, when instability was deliberately evoked by setting displacement feedback gain high, delays in the positive force feedback pathway actually stabilized control. The stabilization of positive force feedback by inherent properties of the neuromuscular system increases the functional scope to be expected of feedback from force receptors in biological motor control. Our results provide a rationale for the delayed excitatory action of Ib heteronymous input on extensor motoneurons in cat locomotion.
Collapse
Affiliation(s)
- A Prochazka
- Division of Neuroscience, University of Alberta, Edmonton, Canada
| | | | | |
Collapse
|
48
|
Abstract
In this paper we review some theoretical aspects of positive feedback in the control of movement. The focus is mainly on new theories regarding the reflexive role of sensory signals from mammalian tendon organ afferents. In static postures these afferents generally mediate negative force feedback. But in locomotion there is evidence of a switch to positive force feedback action. Positive feedback is often associated with instability and oscillation, neither of which occur in normal locomotion. We address this paradox with the use of analytic models of the neuromuscular control system. It is shown that positive force feedback contributes to load compensation and is surprisingly stable because the length-tension properties of mammalian muscle provide automatic gain control. This mechanism can stabilize control even when positive feedback is very strong. The models also show how positive force feedback is stabilized by concomitant negative displacement feedback and, unexpectedly, by delays in the positive feedback pathway. Other examples of positive feedback in animal motor control systems are discussed, including the beta-fusimotor system, which mediates positive feedback of displacement. In general it is seen that positive feedback reduces the sensitivity of the controlled extremities to perturbations of posture and load. We conclude that positive force feedback can provide stable and effective load compensation that complements the action of negative displacement and velocity feedback.
Collapse
Affiliation(s)
- A Prochazka
- Division of Neuroscience, University of Alberta, Edmonton, Canada
| | | | | |
Collapse
|
49
|
Meneray MA, Fields TY, Bennett DJ. Gs and Gq/11 couple vasoactive intestinal peptide and cholinergic stimulation to lacrimal secretion. Invest Ophthalmol Vis Sci 1997; 38:1261-70. [PMID: 9152245] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/04/2023] Open
Abstract
PURPOSE The intent of this study was to determine the physiological role of selected G proteins in receptor-mediated protein release by lacrimal acini. METHODS The role of G proteins in lacrimal secretion was determined in tissues obtained from the lacrimal glands of adult male New Zealand White rabbits. Pertussis toxin treatment of primary acinar cultures and permeabilization of cultured acini with streptolysin-O and insertion of GDP beta S or antibodies against the alpha subunit of Gs or Gq/11 were used to determine the role of G proteins in vasoactive intestinal peptide (VIP) and carbachol-stimulated lacrimal secretion. Gs and Gq/11 were identified in lacrimal membranes obtained from freshly isolated lacrimal gland fragments, freshly isolated acini, and cultured acini by sodium dodecyl sulfate-polyacrylamide gel electrophoresis and immunoblotting. RESULTS Permeabilization by streptolysin-O and introduction of guanosine thiodiphosphate into cultured acini blocked stimulation of protein released by either 100 nM VIP or 100 microM carbachol by approximately 50%. Exposure of cultured acini to 100 ng/ml pertussis toxin for 36 to 48 hours did not affect stimulated release by either agonist, indicating that the guanosine triphosphate-dependent actions of VIP and carbachol are mediated through pertussis toxin-insensitive G proteins. Pertussis toxin-insensitive G proteins in lacrimal membranes obtained from freshly isolated glands, freshly isolated acini, and cultured acini were identified with polyclonal antibodies to the alpha subunits of Gs and Gq/11. Immunoblotting of lacrimal membranes with anti-Gs alpha antiserum showed two immunoreactive bands at 44 and 47 kDa. Anti-Gq/11 alpha antiserum detected a single band at 46 kDa in similar membrane preparations. Anti-Gs alpha antiserum reduced the secretory response to VIP by 64% and to carbachol by 37%. Introduction of anti-Gq/11 alpha antiserum reduced the response to carbachol by 70%; however, the response to VIP was unchanged. Simultaneous introduction of both antisera caused no further reduction of VIP-stimulated release than did anti-Gs alpha antiserum alone. However, simultaneous introduction of both anti-Gs alpha and anti-Gq/11 alpha antisera resulted in complete inhibition of the effects of carbachol on protein release by cultured acini. CONCLUSIONS These results show that VIP receptor activation of lacrimal protein release is mediated through Gs, whereas cholinergic stimulation involves both Gs and Gq/11. From the authors' results, the authors conclude that Gs links VIP receptor activation to adenylyl cyclase and cyclic adenosine 3'-5' monophosphate production and the ultimate release of protein by acinar cells and that Gq/11 links muscarinic receptor activation to phospholipase C and IP3 and diacylglycerol accumulation, which also leads to protein release. Furthermore, it is hypothesized that Gs has an additional role in the regulation of vesicular traffic and exocytosis.
Collapse
Affiliation(s)
- M A Meneray
- Department of Physiology, Louisiana State University Medical Center, New Orleans 70119, USA
| | | | | |
Collapse
|
50
|
Abstract
Clinical assessment of rigidity in parkinsonian patients is largely qualitative. The reliability and validity of the assessments are sometimes in doubt. Several "engineering" methods of quantifying rigidity have been described, but none has been adopted into general clinical practice. A possible reason is that these methods differ in crucial aspects from the clinical exam. We therefore tackled the problem by monitoring the clinical exam itself, using small sensors to measure the forces and displacements applied. Limb impedance (Z) was computed using parameter identification methods and compared to raters' verbalized ratings of rigidity based on a 5-point scale: the Unified Parkinson's Disease Rating System. The qualitative and quantitative estimates of impedance covaried over a fourfold range, depending on the forces imposed and the subject's motor set. Raters differed by up to 1 full point in their mean qualitative ratings and sometimes disagreed on whether levodopa reduced rigidity. This was not due to any significant differences in the overall range of rigidity they evoked, but rather to the way they scored this range [the ratio of mean rating to mean impedance (R/Z) varied between raters and subjects]. On the other hand, the R/Z ratio was reproducible over separate sets of ratings and may therefore serve to convert measured impedance into a standardized rating. Our results indicate that the current clinical exam may be too abbreviated to detect the sometimes quite small reductions in rigidity after levodopa. We conclude that a device that conveniently quantifies the clinical assessment of rigidity is now available and will lead to more standardized protocols for rating rigidity in the near future.
Collapse
Affiliation(s)
- A Prochazka
- Department of Medicine, University of Alberta, Edmonton, Canada
| | | | | | | | | | | | | |
Collapse
|