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Waring ME, Pagoto SL, Rudin LR, Ho C, Horkachuck A, Kapoor IA, Foye Q. Factors associated with mothers' hesitancy to receive a COVID-19 vaccine. J Behav Med 2023; 46:179-184. [PMID: 34981306 PMCID: PMC8723796 DOI: 10.1007/s10865-021-00268-0] [Citation(s) in RCA: 7] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/01/2021] [Accepted: 11/21/2021] [Indexed: 10/25/2022]
Abstract
Vaccine hesitancy can impact maternal and child vaccination rates. We examined factors associated with mothers' hesitancy to receive a COVID-19 vaccine using data from an online survey conducted from mid-February to mid-March 2021. Among unvaccinated participants (N = 203), 28% reported that they would probably not or definitely not get a COVID-19 vaccine. Mothers with high school/GED/trade/technical education (38% hesitant, aOR = 4.0, 95% CI: 1.2-13.2), Associate's degree (43%, aOR = 6.8, 95% CI: 2.4-19.5), and Bachelor's degree (30%, aOR = 3.1, 95% CI: 1.1-8.4) were more likely to report vaccine hesitancy compared to mothers with a graduate degree (19%). Non-Hispanic Black mothers (40% hesitant, aOR = 2.8, 95% CI: 1.0-7.6) were more likely to be vaccine hesitant compared to non-Hispanic white mothers (19%). Mothers with low pandemic-related anxiety were more likely to report vaccine hesitancy than mothers with high pandemic-related anxiety (56% vs 23% hesitant; aOR = 4.8, 95% CI: 1.7-14.1). Research is needed to understand informational, emotional, and attitudinal factors contributing to COVID-19 vaccine hesitancy among mothers to develop and test effective public health messaging to increase vaccination rates.
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Affiliation(s)
- Molly E Waring
- Department of Allied Health Sciences and UConn Center for mHealth and Social Media, University of Connecticut, 358 Mansfield Rd, Unit 1101, Storrs, CT, 06269, USA.
| | - Sherry L Pagoto
- Department of Allied Health Sciences and UConn Center for mHealth and Social Media, University of Connecticut, 358 Mansfield Rd, Unit 1101, Storrs, CT, 06269, USA
| | - Lauren R Rudin
- Department of Allied Health Sciences and UConn Center for mHealth and Social Media, University of Connecticut, 358 Mansfield Rd, Unit 1101, Storrs, CT, 06269, USA
| | - Chloe Ho
- Department of Allied Health Sciences and UConn Center for mHealth and Social Media, University of Connecticut, 358 Mansfield Rd, Unit 1101, Storrs, CT, 06269, USA
| | - Alexa Horkachuck
- Department of Allied Health Sciences and UConn Center for mHealth and Social Media, University of Connecticut, 358 Mansfield Rd, Unit 1101, Storrs, CT, 06269, USA
| | - Indra A Kapoor
- Department of Allied Health Sciences and UConn Center for mHealth and Social Media, University of Connecticut, 358 Mansfield Rd, Unit 1101, Storrs, CT, 06269, USA
| | - Quamyia Foye
- Department of Allied Health Sciences and UConn Center for mHealth and Social Media, University of Connecticut, 358 Mansfield Rd, Unit 1101, Storrs, CT, 06269, USA
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Chiles RM, Ard K, Teixeira-Poit S, Flora C, Williams R, Grady C. Empowering students to confront environmental injustice: Dialogue, theory, empathy, and partnership. SN Soc Sci 2022; 2:255. [PMID: 36465091 PMCID: PMC9684984 DOI: 10.1007/s43545-022-00564-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/05/2021] [Accepted: 11/14/2022] [Indexed: 06/17/2023]
Abstract
Many students find environmental justice to be emotionally overwhelming and/or politically alienating, and there is currently little work that provides instructors with effective techniques for addressing these types of challenges. In this paper, upon situating the environmental studies classroom and the broader undergraduate experience in sociohistorical context, we identify four sequential strategies for engaging and empowering students on environmental justice issues. First, instructors can facilitate an open and honest dialogue by strategically framing course content for the unique composition of the audience, sharing their own racialized experiences (or working with a guest speaker who would be willing to do so), and using interactive assignments to encourage student participation. Second, social theory can be presented to students as complimentary (rather than competing) ideas which can be used for creative, real-world problem solving. Third, instructors and students can cultivate empathy by acknowledging different standpoints, particularly those that have been historically marginalized. Lastly, by working in partnerships with community-based organizations, instructors and students can think and work beyond hero/savior and perpetrator/victim narratives. These strategies are not intended as a set of silver bullets, but rather as a series of potential starting points that are informed by recent scholarship on these topics.
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Affiliation(s)
- Robert Magneson Chiles
- Department of Agricultural Economics, Sociology, and Education, Department of Food Science, Rock Ethics Institute, The Pennsylvania State University, 110C Armsby Bldg, University Park, PA 16802 USA
| | - Kerry Ard
- School of Environment and Natural Resources, The Ohio State University, 210 Kottman Hall 2021 Coffey Road, Columbus, OH 43210 USA
| | - Stephanie Teixeira-Poit
- Department of Sociology & Social Work, North Carolina Agricultural & Technical State University, 1601 E. Market Street, Greensboro, NC 27411 USA
| | - Cornelia Flora
- Department of Sociology, Iowa State University, 103 East Hall 510 Farm House Lane, Ames, IA 50011 USA
| | - Rhianna Williams
- California Center for Sustainable Communities at UCLA, University of California Los Angeles, La Kretz Hall, Suite 300, Los Angeles, CA 90095 USA
| | - Caitlin Grady
- Department of Engineering Management and Systems Engineering, The George Washington University, Science & Engineering Hall, 800 22Nd St NW, Washington, DC 20052 USA
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He X, Balistreri EJ, Kim GH, Zhang W. A general equilibrium assessment of COVID-19's labor productivity impacts on china's regional economies. J Product Anal 2022; 58:129-150. [PMID: 35910675 PMCID: PMC9314246 DOI: 10.1007/s11123-022-00642-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Accepted: 06/19/2022] [Indexed: 06/15/2023]
Abstract
This study introduces a database for analyzing COVID-19's impacts on China's regional economies. This database contains various sectoral and regional economic outcomes at the weekly and monthly level. In the context of a general equilibrium trade model, we first formulate a mathematical representation of the Chinese regional economy and calibrate the model with China's multi-regional input-output table. We then utilize the monthly provincial and sectoral value-added and national trade series to estimate COVID-19's province-by-month labor-productivity impacts from February 2020 to September 2020. As a year-on-year comparison, relative to February 2019 levels, we find an average 39.5% decrease in labor productivity (equivalent to around 305 million jobs) and an average 25.9% decrease in welfare. Labor productivity and welfare quickly returned to the recent high-growth trends for China in the latter half of 2020. By September 2020, relative to September 2019, average labor productivity increased by 12.2% (equivalent to around 94 million jobs) and average welfare increased by 8.2%.
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Affiliation(s)
- Xi He
- Department of Agricultural and Applied Economics, Virginia Tech, Blacksburg, VA USA
| | - Edward J. Balistreri
- Duane Acklie Chair of International Trade and Finance and Associate Professor, Department of Economics, The University of Nebraska-Lincoln, Lincoln, NE USA
| | - Gyu Hyun Kim
- Korea Energy Economics Institute, Ulsan, South Korea
| | - Wendong Zhang
- Associate Professor, Department of Economics and Center for Agricultural and Rural Development, Iowa State University, Ames, IA USA
- Dyson School of Applied Economics and Management, Cornell University, New York Ithaca, USA
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4
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Katz A, Byrne P, Reid S, Bratschun S, Haley S, Pearce S. Identification and validation of a QTL for spikelet number on chromosome arm 6BL of common wheat ( Triticum aestivum L.). Mol Breed 2022; 42:17. [PMID: 37309457 PMCID: PMC10248590 DOI: 10.1007/s11032-022-01288-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/30/2021] [Accepted: 03/07/2022] [Indexed: 06/14/2023]
Abstract
To provide food security for a growing world population, it will be necessary to increase yields of staple crops such as wheat (Triticum aestivum L.). Yield is a complex, polygenic trait influenced by grain weight and number, which are negatively correlated with one another. Spikelet number is an important determinant of grain number, but allelic variants impacting its expression are often associated with heading date, constraining their use in wheat germplasm that must be adapted for specific environments. Identification and characterization of genetic variants affecting spikelet number will increase selection efficiency through their deployment in breeding programs. In this study, a quantitative trait locus (QTL) on chromosome arm 6BL for spikelet number was identified and validated using an association mapping panel, a recombinant inbred line population, and seven derived heterogeneous inbred families. The superior allele, QSn.csu-6Bb, was associated with an increase of 0.248 to 0.808 spikelets per spike across multiple environments that varied for mean spikelet number. Despite epistatic interactions between QSn.csu-6B and three other loci (WAPO-A1, VRN-D3, and PPD-B1), genotypes with a greater number of superior alleles at these loci consistently exhibit higher spikelet number. The frequency of superior alleles at these loci varies among winter wheat varieties adapted to different latitudes of the US Great Plains, revealing opportunities for breeders to select for increased spikelet number using simple molecular markers. This work lays the foundation for the positional cloning of the genetic variant underlying the QSn.csu-6B QTL to strengthen our understanding of spikelet number determination in wheat. Supplementary Information The online version contains supplementary material available at 10.1007/s11032-022-01288-7.
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Affiliation(s)
- Andrew Katz
- Department of Soil and Crop Sciences, Colorado State University, Fort Collins, CO 80523 USA
| | - Patrick Byrne
- Department of Soil and Crop Sciences, Colorado State University, Fort Collins, CO 80523 USA
| | - Scott Reid
- Department of Soil and Crop Sciences, Colorado State University, Fort Collins, CO 80523 USA
| | - Sarah Bratschun
- Department of Soil and Crop Sciences, Colorado State University, Fort Collins, CO 80523 USA
| | - Scott Haley
- Department of Soil and Crop Sciences, Colorado State University, Fort Collins, CO 80523 USA
| | - Stephen Pearce
- Department of Soil and Crop Sciences, Colorado State University, Fort Collins, CO 80523 USA
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McFadden BR, Ferraro PJ, Messer KD. Private costs of carbon emissions abatement by limiting beef consumption and vehicle use in the United States. PLoS One 2022; 17:e0261372. [PMID: 35045080 PMCID: PMC8769331 DOI: 10.1371/journal.pone.0261372] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2021] [Accepted: 11/30/2021] [Indexed: 11/21/2022] Open
Abstract
A popular strategy for mitigating climate change is to persuade or incentivize individuals to limit behaviors associated with high greenhouse gas emissions. In this study, adults in the mid-Atlantic United States bid in an auction to receive compensation for eliminating beef consumption or limiting vehicle use. The auction incentivized participants to reveal their true costs of accepting these limits for periods ranging from one week to one year. Compliance with the conditions of the auction was confirmed via a random field audit of the behavioral changes. The estimated median abatement costs were greater than $600 per tCO2e for beef consumption and $1,300 per tCO2e for vehicle use, values much higher than the price of carbon offsets and most estimates of the social cost of carbon. Although these values may decline over time with experience or broader social adoption, they imply that policies that encourage innovations to reduce the costs of behavior change, such as meat alternatives or emission-free vehicles, may be a more fruitful than those that limit beef consumption or vehicle use.
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Affiliation(s)
| | - Paul J. Ferraro
- Johns Hopkins University, Baltimore, Maryland, United States of America
| | - Kent D. Messer
- University of Delaware, Newark, Delaware, United States of America
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Brainard SH, Ellison SL, Simon PW, Dawson JC, Goldman IL. Genetic characterization of carrot root shape and size using genome-wide association analysis and genomic-estimated breeding values. Theor Appl Genet 2022; 135:605-622. [PMID: 34782932 PMCID: PMC8866378 DOI: 10.1007/s00122-021-03988-8] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/25/2021] [Accepted: 10/27/2021] [Indexed: 06/13/2023]
Abstract
The principal phenotypic determinants of market class in carrot-the size and shape of the root-are under primarily additive, but also highly polygenic, genetic control. The size and shape of carrot roots are the primary determinants not only of yield, but also market class. These quantitative phenotypes have historically been challenging to objectively evaluate, and thus subjective visual assessment of market class remains the primary method by which selection for these traits is performed. However, advancements in digital image analysis have recently made possible the high-throughput quantification of size and shape attributes. It is therefore now feasible to utilize modern methods of genetic analysis to investigate the genetic control of root morphology. To this end, this study utilized both genome wide association analysis (GWAS) and genomic-estimated breeding values (GEBVs) and demonstrated that the components of market class are highly polygenic traits, likely under the influence of many small effect QTL. Relatively large proportions of additive genetic variance for many of the component phenotypes support high predictive ability of GEBVs; average prediction ability across underlying market class traits was 0.67. GWAS identified multiple QTL for four of the phenotypes which compose market class: length, aspect ratio, maximum width, and root fill, a previously uncharacterized trait which represents the size-independent portion of carrot root shape. By combining digital image analysis with GWAS and GEBVs, this study represents a novel advance in our understanding of the genetic control of market class in carrot. The immediate practical utility and viability of genomic selection for carrot market class is also described, and concrete guidelines for the design of training populations are provided.
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Affiliation(s)
- Scott H Brainard
- Department of Horticulture, University of Wisconsin-Madison, Madison, WI, 53706, USA.
| | - Shelby L Ellison
- Department of Horticulture, University of Wisconsin-Madison, Madison, WI, 53706, USA
| | - Philipp W Simon
- Department of Horticulture, University of Wisconsin-Madison, Madison, WI, 53706, USA
- Vegetable Crops Research Unit, US Department of Agriculture-Agricultural Research Service, Madison, WI, 53706, USA
| | - Julie C Dawson
- Department of Horticulture, University of Wisconsin-Madison, Madison, WI, 53706, USA
| | - Irwin L Goldman
- Department of Horticulture, University of Wisconsin-Madison, Madison, WI, 53706, USA
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7
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Thavarajah D, Lawrence TJ, Powers SE, Kay J, Thavarajah P, Shipe E, McGee R, Kumar S, Boyles R. Organic dry pea (Pisum sativum L.) biofortification for better human health. PLoS One 2022; 17:e0261109. [PMID: 35025919 PMCID: PMC8757916 DOI: 10.1371/journal.pone.0261109] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/01/2021] [Accepted: 11/25/2021] [Indexed: 12/24/2022] Open
Abstract
A primary criticism of organic agriculture is its lower yield and nutritional quality compared to conventional systems. Nutritionally, dry pea (Pisum sativum L.) is a rich source of low digestible carbohydrates, protein, and micronutrients. This study aimed to evaluate dry pea cultivars and advanced breeding lines using on-farm field selections to inform the development of biofortified organic cultivars with increased yield and nutritional quality. A total of 44 dry pea entries were grown in two USDA-certified organic on-farm locations in South Carolina (SC), United States of America (USA) for two years. Seed yield and protein for dry pea ranged from 61 to 3833 kg ha-1 and 12.6 to 34.2 g/100 g, respectively, with low heritability estimates. Total prebiotic carbohydrate concentration ranged from 14.7 to 26.6 g/100 g. A 100-g serving of organic dry pea provides 73.5 to 133% of the recommended daily allowance (%RDA) of prebiotic carbohydrates. Heritability estimates for individual prebiotic carbohydrates ranged from 0.27 to 0.82. Organic dry peas are rich in minerals [iron (Fe): 1.9-26.2 mg/100 g; zinc (Zn): 1.1-7.5 mg/100 g] and have low to moderate concentrations of phytic acid (PA:18.8-516 mg/100 g). The significant cultivar, location, and year effects were evident for grain yield, thousand seed weight (1000-seed weight), and protein, but results for other nutritional traits varied with genotype, environment, and interactions. "AAC Carver," "Jetset," and "Mystique" were the best-adapted cultivars with high yield, and "CDC Striker," "Fiddle," and "Hampton" had the highest protein concentration. These cultivars are the best performing cultivars that should be incorporated into organic dry pea breeding programs to develop cultivars suitable for organic production. In conclusion, organic dry pea has potential as a winter cash crop in southern climates. Still, it will require selecting diverse genetic material and location sourcing to develop improved cultivars with a higher yield, disease resistance, and nutritional quality.
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Affiliation(s)
- Dil Thavarajah
- Plant and Environmental Sciences, Pulse Quality and Nutritional Breeding, Biosystems Research Complex, Clemson University, Clemson, South Carolina, United States of America
| | - Tristan J. Lawrence
- Plant and Environmental Sciences, Pulse Quality and Nutritional Breeding, Biosystems Research Complex, Clemson University, Clemson, South Carolina, United States of America
| | - Sarah E. Powers
- Plant and Environmental Sciences, Pulse Quality and Nutritional Breeding, Biosystems Research Complex, Clemson University, Clemson, South Carolina, United States of America
| | - Joshua Kay
- Plant and Environmental Sciences, Pulse Quality and Nutritional Breeding, Biosystems Research Complex, Clemson University, Clemson, South Carolina, United States of America
| | - Pushparajah Thavarajah
- Plant and Environmental Sciences, Pulse Quality and Nutritional Breeding, Biosystems Research Complex, Clemson University, Clemson, South Carolina, United States of America
| | - Emerson Shipe
- Plant and Environmental Sciences, Pulse Quality and Nutritional Breeding, Biosystems Research Complex, Clemson University, Clemson, South Carolina, United States of America
| | - Rebecca McGee
- USDA Agriculture Research Service, Grain Legume Genetics and Physiology Research Unit, Washington State University, Pullman, Washington, United States of America
| | - Shiv Kumar
- Biodiversity and Crop Improvement Program, International Centre for Agricultural Research in the Dry Areas (ICARDA), Rabat, Morocco
| | - Rick Boyles
- Plant and Environmental Sciences, PeeDee Research and Education Center, Florence, South Carolina, United States of America
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Abstract
Intestinal health is essential for the resistance to enteric diseases and for nutrient digestion and absorption to support growth. The intestine of nursery pigs are immature and vulnerable to external challenges, which cause negative impacts on the structure and function of the intestine. Among nutritional interventions, the benefits of milk are significant for the intestinal health of pigs. Milk coproducts have traditionally been used in starter feeds to improve the growth of nursery pigs, but their use is somewhat limited due to the high costs and potential risks of excessive lactose on the intestine. Thus, understanding a proper feeding level of milk carbohydrates is an important start of the feeding strategy. For nursery pigs, lactose is considered a highly digestible energy source compared with plant-based starch, whereas milk oligosaccharides are considered bioactive compounds modulating intestinal immunity and microbiota. Therefore, milk carbohydrates, mainly composed of lactose and oligosaccharides, have essential roles in the intestinal development and functions of nursery pigs. The proper feeding levels of lactose in starter feeds could be variable by weaning age, body weight, or genetic lines. Effects of lactose and milk oligosaccharides have been broadly studied in human health and animal production. Therefore, this review focuses on the mechanisms of lactose and milk oligosaccharides affecting intestinal maturation and functions through modulation of enterocyte proliferation, intestinal immunity, and intestinal microbiota of nursery pigs.
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Affiliation(s)
- Ki Beom Jang
- Department of Animal Science, North Carolina State University, Raleigh, NC, 27695, USA
| | - Sung Woo Kim
- Department of Animal Science, North Carolina State University, Raleigh, NC, 27695, USA.
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Kuzay S, Lin H, Li C, Chen S, Woods DP, Zhang J, Lan T, von Korff M, Dubcovsky J. WAPO-A1 is the causal gene of the 7AL QTL for spikelet number per spike in wheat. PLoS Genet 2022; 18:e1009747. [PMID: 35025863 PMCID: PMC8791482 DOI: 10.1371/journal.pgen.1009747] [Citation(s) in RCA: 26] [Impact Index Per Article: 13.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/26/2021] [Revised: 01/26/2022] [Accepted: 12/18/2021] [Indexed: 01/08/2023] Open
Abstract
Improving our understanding of the genes regulating grain yield can contribute to the development of more productive wheat varieties. Previously, a highly significant QTL affecting spikelet number per spike (SNS), grain number per spike (GNS) and grain yield was detected on chromosome arm 7AL in multiple genome-wide association studies. Using a high-resolution genetic map, we established that the A-genome homeolog of WHEAT ORTHOLOG OF APO1 (WAPO-A1) was a leading candidate gene for this QTL. Using mutants and transgenic plants, we demonstrate in this study that WAPO-A1 is the causal gene underpinning this QTL. Loss-of-function mutants wapo-A1 and wapo-B1 showed reduced SNS in tetraploid wheat, and the effect was exacerbated in wapo1 combining both mutations. By contrast, spikes of transgenic wheat plants carrying extra copies of WAPO-A1 driven by its native promoter had higher SNS, a more compact spike apical region and a smaller terminal spikelet than the wild type. Taken together, these results indicate that WAPO1 affects SNS by regulating the timing of terminal spikelet formation. Both transgenic and wapo1 mutant plants showed a wide range of floral abnormalities, indicating additional roles of WAPO1 on wheat floral development. Previously, we found three widespread haplotypes in the QTL region (H1, H2 and H3), each associated with particular WAPO-A1 alleles. Results from this and our previous study show that the WAPO-A1 allele in the H1 haplotype (115-bp deletion in the promoter) is expressed at significantly lower levels in the developing spikes than the alleles in the H2 and H3 haplotypes, resulting in reduced SNS. Field experiments also showed that the H2 haplotype is associated with the strongest effects in increasing SNS and GNS (H2>H3>H1). The H2 haplotype is already present in most modern common wheat varieties but is rare in durum wheat, where it might be particularly useful to improve grain yield.
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Affiliation(s)
- Saarah Kuzay
- Department of Plant Sciences, University of California, Davis, California, United States of America
| | - Huiqiong Lin
- Department of Plant Sciences, University of California, Davis, California, United States of America
- Howard Hughes Medical Institute, Chevy Chase, Maryland, United States of America
| | - Chengxia Li
- Department of Plant Sciences, University of California, Davis, California, United States of America
- Howard Hughes Medical Institute, Chevy Chase, Maryland, United States of America
| | - Shisheng Chen
- Department of Plant Sciences, University of California, Davis, California, United States of America
- Peking University Institute of Advanced Agricultural Sciences, Weifang, Shandong, China
| | - Daniel P. Woods
- Department of Plant Sciences, University of California, Davis, California, United States of America
- Howard Hughes Medical Institute, Chevy Chase, Maryland, United States of America
| | - Junli Zhang
- Department of Plant Sciences, University of California, Davis, California, United States of America
| | - Tianyu Lan
- Institute for Plant Genetics, Heinrich Heine University, Duesseldorf, Germany
| | - Maria von Korff
- Institute for Plant Genetics, Heinrich Heine University, Duesseldorf, Germany
- Cluster of Excellence on Plant Sciences “SMART Plants for Tomorrow’s Needs”, Heinrich Heine University, Duesseldorf, Germany
| | - Jorge Dubcovsky
- Department of Plant Sciences, University of California, Davis, California, United States of America
- Howard Hughes Medical Institute, Chevy Chase, Maryland, United States of America
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Allaire M, Dinar A. What Drives Water Utility Selection of Pricing Methods? Evidence from California. Water Resour Manage 2022; 36:153-169. [PMCID: PMC8566021 DOI: 10.1007/s11269-021-03018-8] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/18/2021] [Accepted: 10/25/2021] [Indexed: 05/24/2023]
Abstract
Water pricing is a demand management strategy to address the looming challenge of greater water scarcity in arid regions. Much of the literature on residential water rates focuses on evaluating the impact of pricing on household conservation. A separate, but rarely addressed question is what motivates a water utility to select a particular rate structure and the timing of doing so. We assess utilities’ decisions to adopt pro-conservation rate structures, such as increasing block rates and water budget rates. We develop a conceptual model of utility decision-making regarding the transition to pro-conservation rates and apply it to California. We examine the relationship between rate adoption and characteristics of utilities and customers using logistic regression and a balanced panel dataset of 323 California water systems from 2006-2015. We find a notable shift towards pro-conservation rates, which 71% of California utilities had by 2015, compared to 44% in 2006. Capacity factors associated with adoption include size of service population and customer income level, while motivating factors include peer adoption, greater customer engagement, and special district governance. Overall, this study provides insight into barriers to pro-conservation pricing, which can inform policies to enable transitions and advance conservation goals.
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Affiliation(s)
- M. Allaire
- Department of Urban Planning and Public Policy, University of California, Irvine, USA
| | - A. Dinar
- School of Public Policy, University of California, Riverside, USA
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11
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Soto-Moreno EJ, Balboula A, Spinka C, Rivera RM. Serum supplementation during bovine embryo culture affects their development and proliferation through macroautophagy and endoplasmic reticulum stress regulation. PLoS One 2021; 16:e0260123. [PMID: 34882691 PMCID: PMC8659681 DOI: 10.1371/journal.pone.0260123] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/02/2021] [Accepted: 11/02/2021] [Indexed: 11/18/2022] Open
Abstract
Serum supplementation during bovine embryo culture has been demonstrated to promote cell proliferation and preimplantation embryo development. However, these desirable outcomes, have been associated with gene expression alterations of pathways involved in macroautophagy, growth, and development at the blastocyst stage, as well as with developmental anomalies such as fetal overgrowth and placental malformations. In order to start dissecting the molecular pathways by which serum supplementation of the culture medium during the preimplantation stage promotes developmental abnormalities, we examined blastocyst morphometry, inner cell mass and trophectoderm cell allocations, macroautophagy, and endoplasmic reticulum stress. On day 5 post-insemination, > 16 cells embryos were selected and cultured in medium containing 10% serum or left as controls. Embryo diameter, inner cell mass and trophectoderm cell number, and macroautophagy were measured on day 8 blastocysts (BL) and expanded blastocysts (XBL). On day 5 and day 8, we assessed transcript level of the ER stress markers HSPA5, ATF4, MTHFD2, and SHMT2 as well as XBP1 splicing (a marker of the unfolded protein response). Serum increased diameter and proliferation of embryos when compared to the no-serum group. In addition, serum increased macroautophagy of BL when compared to controls, while the opposite was true for XBL. None of the genes analyzed was differentially expressed at any stage, except that serum decreased HSPA5 in day 5 > 16 cells stage embryos. XBP1 splicing was decreased in BL when compared to XBL, but only in the serum group. Our data suggest that serum rescues delayed embryos by alleviating endoplasmic reticulum stress and promotes development of advanced embryos by decreasing macroautophagy.
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Affiliation(s)
- Edgar Joel Soto-Moreno
- Division of Animal Sciences, University of Missouri, Columbia, MO, United States of America
| | - Ahmed Balboula
- Division of Animal Sciences, University of Missouri, Columbia, MO, United States of America
| | - Christine Spinka
- College of Agriculture, Food and Natural Resources, University of Missouri, Columbia, MO, United States of America
| | - Rocío Melissa Rivera
- Division of Animal Sciences, University of Missouri, Columbia, MO, United States of America
- * E-mail:
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12
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Bucciarelli B, Xu Z, Ao S, Cao Y, Monteros MJ, Topp CN, Samac DA. Phenotyping seedlings for selection of root system architecture in alfalfa (Medicago sativa L.). Plant Methods 2021; 17:125. [PMID: 34876178 PMCID: PMC8650460 DOI: 10.1186/s13007-021-00825-3] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/30/2021] [Accepted: 11/26/2021] [Indexed: 06/13/2023]
Abstract
BACKGROUND The root system architecture (RSA) of alfalfa (Medicago sativa L.) affects biomass production by influencing water and nutrient uptake, including nitrogen fixation. Further, roots are important for storing carbohydrates that are needed for regrowth in spring and after each harvest. Previous selection for a greater number of branched and fibrous roots significantly increased alfalfa biomass yield. However, phenotyping root systems of mature alfalfa plant is labor-intensive, time-consuming, and subject to environmental variability and human error. High-throughput and detailed phenotyping methods are needed to accelerate the development of alfalfa germplasm with distinct RSAs adapted to specific environmental conditions and for enhancing productivity in elite germplasm. In this study methods were developed for phenotyping 14-day-old alfalfa seedlings to identify measurable root traits that are highly heritable and can differentiate plants with either a branched or a tap rooted phenotype. Plants were grown in a soil-free mixture under controlled conditions, then the root systems were imaged with a flatbed scanner and measured using WinRhizo software. RESULTS The branched root plants had a significantly greater number of tertiary roots and significantly longer tertiary roots relative to the tap rooted plants. Additionally, the branch rooted population had significantly more secondary roots > 2.5 cm relative to the tap rooted population. These two parameters distinguishing phenotypes were confirmed using two machine learning algorithms, Random Forest and Gradient Boosting Machines. Plants selected as seedlings for the branch rooted or tap rooted phenotypes were used in crossing blocks that resulted in a genetic gain of 10%, consistent with the previous selection strategy that utilized manual root scoring to phenotype 22-week-old-plants. Heritability analysis of various root architecture parameters from selected seedlings showed tertiary root length and number are highly heritable with values of 0.74 and 0.79, respectively. CONCLUSIONS The results show that seedling root phenotyping is a reliable tool that can be used for alfalfa germplasm selection and breeding. Phenotypic selection of RSA in seedlings reduced time for selection by 20 weeks, significantly accelerating the breeding cycle.
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Affiliation(s)
- Bruna Bucciarelli
- Department of Agronomy and Plant Genetics, University of Minnesota, 1991 Upper Buford Circle, St. Paul, MN, 55108, USA
| | - Zhanyou Xu
- USDA-ARS, Plant Science Research Unit, 1991 Upper Buford Circle, St. Paul, MN, 55108, USA
| | - Samadangla Ao
- Department of Agronomy and Plant Genetics, University of Minnesota, 1991 Upper Buford Circle, St. Paul, MN, 55108, USA
- Kohima Science College, Jotsoma, 797002, Nagaland, India
| | - Yuanyuan Cao
- Department of Plant Pathology, University of Minnesota, 1991 Upper Buford Circle, 495 Borlaug Hall, St. Paul, MN, 55108, USA
- School of Life Sciences, Anhui Agricultural University, Hefei, 230036, Anhui, China
| | - Maria J Monteros
- Noble Research Institute, 2510 Sam Noble Parkway, Ardmore, OK, 73401, USA
- Bayer Crop Science, Chesterfield, MO, 63017, USA
| | - Christopher N Topp
- Donald Danforth Plant Science Center, 975 N Warson Road, Olivette, MO, 63132, USA
| | - Deborah A Samac
- USDA-ARS, Plant Science Research Unit, 1991 Upper Buford Circle, St. Paul, MN, 55108, USA.
- Department of Plant Pathology, University of Minnesota, 1991 Upper Buford Circle, 495 Borlaug Hall, St. Paul, MN, 55108, USA.
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Marmolejo LO, Thompson MN, Helms AM. Defense Suppression through Interplant Communication Depends on the Attacking Herbivore Species. J Chem Ecol 2021; 47:1049-1061. [PMID: 34541611 PMCID: PMC8642252 DOI: 10.1007/s10886-021-01314-6] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/30/2021] [Revised: 09/06/2021] [Accepted: 09/11/2021] [Indexed: 12/21/2022]
Abstract
In response to herbivory, plants emit volatile compounds that play important roles in plant defense. Herbivore-induced plant volatiles (HIPVs) can deter herbivores, recruit natural enemies, and warn other plants of possible herbivore attack. Following HIPV detection, neighboring plants often respond by enhancing their anti-herbivore defenses, but a recent study found that herbivores can manipulate HIPV-interplant communication for their own benefit and suppress defenses in neighboring plants. Herbivores induce species-specific blends of HIPVs and how these different blends affect the specificity of plant defense responses remains unclear. Here we assessed how HIPVs from zucchini plants (Cucurbita pepo) challenged with different herbivore species affect resistance in neighboring plants. Volatile "emitter" plants were damaged by one of three herbivore species: saltmarsh caterpillars (Estigmene acrea), squash bugs (Anasa tristis), or striped cucumber beetles (Acalymma vittatum), or were left as undamaged controls. Neighboring "receiver" plants were exposed to HIPVs or control volatiles and then challenged by the associated herbivore species. As measures of plant resistance, we quantified herbivore feeding damage and defense-related phytohormones in receivers. We found that the three herbivore species induced different HIPV blends from squash plants. HIPVs induced by saltmarsh caterpillars suppressed defenses in receivers, leading to greater herbivory and lower defense induction compared to controls. In contrast, HIPVs induced by cucumber beetles and squash bugs did not affect plant resistance to subsequent herbivory in receivers. Our study shows that herbivore species identity affects volatile-mediated interplant communication in zucchini, revealing a new example of herbivore defense suppression through volatile cues.
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Affiliation(s)
- Laura O Marmolejo
- Department of Entomology, Texas A&M University, College Station, TX, 77843-2475, USA
| | - Morgan N Thompson
- Department of Entomology, Texas A&M University, College Station, TX, 77843-2475, USA
| | - Anjel M Helms
- Department of Entomology, Texas A&M University, College Station, TX, 77843-2475, USA.
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Acevedo-Villanueva KY, Renu S, Shanmugasundaram R, Akerele GO, Gourapura RJ, Selvaraj RK. Salmonella chitosan nanoparticle vaccine administration is protective against Salmonella Enteritidis in broiler birds. PLoS One 2021; 16:e0259334. [PMID: 34784366 PMCID: PMC8594846 DOI: 10.1371/journal.pone.0259334] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/19/2021] [Accepted: 10/19/2021] [Indexed: 11/21/2022] Open
Abstract
Salmonella control strategies include vaccines that help reduce the spread of Salmonella in poultry flocks. In this study we evaluated the efficacy of administering a live Salmonella vaccine followed by a killed Salmonella chitosan nanoparticle (CNP) vaccine booster on the cellular and humoral immunity of broilers. The CNP vaccine was synthesized with Salmonella Enteritidis (S. Enteritidis) outer-membrane-proteins (OMPs) and flagellin-proteins. At d1-of-age, one-hundred-sixty-eight chicks were allocated into treatments: 1) No vaccine, 2) Live vaccine (Poulvac®ST), 3) CNP vaccine, 4) Live+CNP vaccine. At d1-of-age, birds were orally vaccinated with PBS, Live vaccine, or CNP. At d7-of-age, the No vaccine, Live vaccine and CNP vaccine groups were boosted with PBS and the Live+CNP vaccine group was boosted with CNP. At d14-of-age, birds were challenged with 1×109 CFU/bird S. Enteritidis. There were no significant differences in body-weight-gain (BWG) or feed-conversion-ratio (FCR). At 8h-post-challenge, CNP and Live+CNP-vaccinated birds had 17% and 24% greater levels (P<0.05) of anti-Salmonella OMPs IgA in bile, respectively, compared to control. At d28-of-age, CNP, Live, and Live+CNP-vaccinated birds had 33%, 18%, and 24% greater levels (P<0.05) of anti-Salmonella OMPs IgA in bile, respectively, compared to control. At d14-of-age, Live+CNP-vaccinated birds had 46% greater levels (P<0.05) of anti-Salmonella OMPs IgY in serum, compared to control. At d21-of-age, splenocytes from CNP and Live-vaccinated birds had increased (P<0.05) T-lymphocyte proliferation at 0.02 mg/mL OMPs stimulation compared to the control. At d28-of-age, CNP and Live+CNP-vaccinated birds had 0.9 Log10 CFU/g and 1 Log10 CFU/g decreased S. Enteritidis cecal loads (P<0.05), respectively, compared to control. The CNP vaccine does not have adverse effects on bird's BWG and FCR or IL-1β, IL-10, IFN-γ, or iNOS mRNA expression levels. It can be concluded that the CNP vaccine, as a first dose or as a booster vaccination, is an alternative vaccine candidate against S. Enteritidis in broilers.
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Affiliation(s)
| | - Sankar Renu
- Department of Veterinary Preventative Medicine, Center for Food Animal Health, Ohio Agricultural Research and Development Center, The Ohio State University, Columbus, Ohio, United States of America
| | | | - Gabriel O. Akerele
- Department of Poultry Science, The University of Georgia, Athens, Georgia, United States of America
| | - Renukaradhy J. Gourapura
- Department of Veterinary Preventative Medicine, Center for Food Animal Health, Ohio Agricultural Research and Development Center, The Ohio State University, Columbus, Ohio, United States of America
| | - Ramesh K. Selvaraj
- Department of Poultry Science, The University of Georgia, Athens, Georgia, United States of America
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15
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Jager MC, Tomlinson JE, Lopez-Astacio RA, Parrish CR, Van de Walle GR. Small but mighty: old and new parvoviruses of veterinary significance. Virol J 2021; 18:210. [PMID: 34689822 PMCID: PMC8542416 DOI: 10.1186/s12985-021-01677-y] [Citation(s) in RCA: 27] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/16/2021] [Accepted: 10/08/2021] [Indexed: 12/14/2022] Open
Abstract
In line with the Latin expression "sed parva forti" meaning "small but mighty," the family Parvoviridae contains many of the smallest known viruses, some of which result in fatal or debilitating infections. In recent years, advances in metagenomic viral discovery techniques have dramatically increased the identification of novel parvoviruses in both diseased and healthy individuals. While some of these discoveries have solved etiologic mysteries of well-described diseases in animals, many of the newly discovered parvoviruses appear to cause mild or no disease, or disease associations remain to be established. With the increased use of animal parvoviruses as vectors for gene therapy and oncolytic treatments in humans, it becomes all the more important to understand the diversity, pathogenic potential, and evolution of this diverse family of viruses. In this review, we discuss parvoviruses infecting vertebrate animals, with a special focus on pathogens of veterinary significance and viruses discovered within the last four years.
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Affiliation(s)
- Mason C Jager
- Baker Institute for Animal Health, College of Veterinary Medicine, Cornell University, Ithaca, NY, 14853, USA
| | - Joy E Tomlinson
- Baker Institute for Animal Health, College of Veterinary Medicine, Cornell University, Ithaca, NY, 14853, USA
| | - Robert A Lopez-Astacio
- Baker Institute for Animal Health, College of Veterinary Medicine, Cornell University, Ithaca, NY, 14853, USA
| | - Colin R Parrish
- Baker Institute for Animal Health, College of Veterinary Medicine, Cornell University, Ithaca, NY, 14853, USA
| | - Gerlinde R Van de Walle
- Baker Institute for Animal Health, College of Veterinary Medicine, Cornell University, Ithaca, NY, 14853, USA.
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16
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Fiddler JL, Clarke SL. Evaluation of candidate reference genes for quantitative real-time PCR analysis in a male rat model of dietary iron deficiency. Genes Nutr 2021; 16:17. [PMID: 34600467 PMCID: PMC8487497 DOI: 10.1186/s12263-021-00698-0] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/07/2021] [Accepted: 09/15/2021] [Indexed: 11/30/2022]
Abstract
BACKGROUND Quantitative real-time polymerase chain reaction (qPCR) is a reliable and efficient method for quantitation of gene expression. Due to the increased use of qPCR in examining nutrient-gene interactions, it is important to examine, develop, and utilize standardized approaches for data analyses and interpretation. A common method used to normalize expression data involves the use of reference genes (RG) to determine relative mRNA abundance. When calculating the relative abundance, the selection of RG can influence experimental results and has the potential to skew data interpretation. Although common RG may be used for normalization, often little consideration is given to the suitability of RG selection for an experimental condition or between various tissue or cell types. In the current study, we examined the stability of gene expression using BestKeeper, comparative delta quantitation cycle, NormFinder, and RefFinder in a variety of tissues obtained from iron-deficient and pair-fed iron-replete rats to determine the optimal selection among ten candidate RG. RESULTS Our results suggest that several commonly used RG (e.g., Actb and Gapdh) exhibit less stability compared to other candidate RG (e.g., Rpl19 and Rps29) in both iron-deficient and iron-replete pair-fed conditions. For all evaluated RG, Tfrc expression significantly increased in iron-deficient animal livers compared to the iron-replete pair-fed controls; however, the relative induction varied nearly 4-fold between the most suitable (Rpl19) and least suitable (Gapdh) RG. CONCLUSION These results indicate the selection and use of RG should be empirically determined and RG selection may vary across experimental conditions and biological tissues.
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Affiliation(s)
- Joanna L Fiddler
- Division of Nutritional Sciences, Cornell University, Ithaca, NY, 14850-6301, USA.
- Department of Nutritional Sciences, Oklahoma State University, Stillwater, OK, 74078, USA.
| | - Stephen L Clarke
- Department of Nutritional Sciences, Oklahoma State University, Stillwater, OK, 74078, USA
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17
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Ayala-Ortiz CO, Farriester JW, Pratt CJ, Goldkamp AK, Matts J, Hoback WW, Gustafson JE, Hagen DE. Effect of food source availability in the salivary gland transcriptome of the unique burying beetle Nicrophorus pustulatus (Coleoptera: Silphidae). PLoS One 2021; 16:e0255660. [PMID: 34555059 PMCID: PMC8460033 DOI: 10.1371/journal.pone.0255660] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/11/2021] [Accepted: 07/21/2021] [Indexed: 12/02/2022] Open
Abstract
Nicrophorus is a genus of beetles that bury and transform small vertebrate carcasses into a brood ball coated with their oral and anal secretions to prevent decay and that will serve as a food source for their young. Nicrophorus pustulatus is an unusual species with the ability to overtake brood of other burying beetles and whose secretions, unlike other Nicrophorus species, has been reported not to exhibit antimicrobial properties. This work aims to better understand how the presence or absence of a food source influences the expression of genes involved in the feeding process of N. pustulatus. To achieve that, total RNA was extracted from pooled samples of salivary gland tissue from N. pustulatus and sequenced using an Illumina platform. The resulting reads were used to assemble a de novo transcriptome using Trinity. Duplicates with more than 95% similarity were removed to obtain a "unigene" set. Annotation of the unigene set was done using the Trinotate pipeline. Transcript abundance was determined using Kallisto and differential gene expression analysis was performed using edgeR. A total of 651 genes were found to be differentially expressed, including 390 upregulated and 261 downregulated genes in fed insects compared to starved. Several genes upregulated in fed beetles are associated with the insect immune response and detoxification processes with only one transcript encoding for the antimicrobial peptide (AMP) defensin. These results confirm that N. pustulatus does not upregulate the production of genes encoding AMPs during feeding. This study provides a snapshot of the changes in gene expression in the salivary glands of N. pustulatus following feeding while providing a well described transcriptome for the further analysis of this unique burying beetle.
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Affiliation(s)
- Christian O. Ayala-Ortiz
- Department of Animal and Food Science, Oklahoma State University, Stillwater, Oklahoma, United States of America
- Department of Entomology and Plant Pathology, Oklahoma State University, Stillwater, Oklahoma, United States of America
| | - Jacob W. Farriester
- Department of Entomology and Plant Pathology, Oklahoma State University, Stillwater, Oklahoma, United States of America
| | - Carrie J. Pratt
- Department of Entomology and Plant Pathology, Oklahoma State University, Stillwater, Oklahoma, United States of America
| | - Anna K. Goldkamp
- Department of Animal and Food Science, Oklahoma State University, Stillwater, Oklahoma, United States of America
| | - Jessica Matts
- Department of Biochemistry and Molecular Biology, Oklahoma State University, Stillwater, Oklahoma, United States of America
| | - W. Wyatt Hoback
- Department of Entomology and Plant Pathology, Oklahoma State University, Stillwater, Oklahoma, United States of America
| | - John E. Gustafson
- Department of Biochemistry and Molecular Biology, Oklahoma State University, Stillwater, Oklahoma, United States of America
| | - Darren E. Hagen
- Department of Animal and Food Science, Oklahoma State University, Stillwater, Oklahoma, United States of America
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18
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Miner J, Dwivedi P, Izlar R, Atkins D, Kadam P. Perspectives of four stakeholder groups about the participation of female forest landowners in forest management in Georgia, United States. PLoS One 2021; 16:e0256654. [PMID: 34428261 PMCID: PMC8384192 DOI: 10.1371/journal.pone.0256654] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/16/2021] [Accepted: 08/11/2021] [Indexed: 11/22/2022] Open
Abstract
As the number of female forest landowners (FFLs) in the United States continues to rise, there is an increasing need to understand the perceptions of stakeholder groups about opportunities and challenges faced by FFLs in the context of sustainable forestland management. This study utilizes the technique of SWOT-AHP (Strengths, Weaknesses, Opportunities, and Treats-Analytical Hierarchy Process) to understand the perceptions of four stakeholder groups (FFLs, private foresters, government representatives, and non-profits) in Georgia-a significant forestry state located in the Southern United States. Sixteen factors (four under each SWOT category) were selected through a comprehensive literature review and detailed interviews with individuals from the identified stakeholder groups. A survey was created using these factors that asked stakeholders to compare them in their respective SWOT categories. An additional survey was created for each stakeholder group where survey participants compared the highest-ranking factors in each SWOT category. We found that all stakeholder groups prioritized weaknesses over the other SWOT categories. Results showed a significant need for relevant educational outreach programs that cater specifically to FFLs. Additionally, researchers found a need to promote the interest of future generations in forestland management as all stakeholder groups felt that limited interest from future generations was the most important threat. This study will directly feed into regional, national, and international attempts to increase the participation of minority family forest landowners in sustainable forest management through integrated forest policy development.
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Affiliation(s)
- Jacqueline Miner
- Warnell School of Forestry and Natural Resources, University of Georgia, Athens, GA, United States of America
| | - Puneet Dwivedi
- Warnell School of Forestry and Natural Resources, University of Georgia, Athens, GA, United States of America
| | - Robert Izlar
- Warnell School of Forestry and Natural Resources, University of Georgia, Athens, GA, United States of America
| | | | - Parag Kadam
- Warnell School of Forestry and Natural Resources, University of Georgia, Athens, GA, United States of America
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19
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Tiffany CR, Lee JY, Rogers AWL, Olsan EE, Morales P, Faber F, Bäumler AJ. The metabolic footprint of Clostridia and Erysipelotrichia reveals their role in depleting sugar alcohols in the cecum. Microbiome 2021; 9:174. [PMID: 34412707 PMCID: PMC8375055 DOI: 10.1186/s40168-021-01123-9] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/12/2021] [Accepted: 06/25/2021] [Indexed: 05/07/2023]
Abstract
BACKGROUND The catabolic activity of the microbiota contributes to health by aiding in nutrition, immune education, and niche protection against pathogens. However, the nutrients consumed by common taxa within the gut microbiota remain incompletely understood. METHODS Here we combined microbiota profiling with an un-targeted metabolomics approach to determine whether depletion of small metabolites in the cecum of mice correlated with the presence of specific bacterial taxa. Causality was investigated by engrafting germ-free or antibiotic-treated mice with complex or defined microbial communities. RESULTS We noted that a depletion of Clostridia and Erysipelotrichia from the gut microbiota triggered by antibiotic treatment was associated with an increase in the cecal concentration of sugar acids and sugar alcohols (polyols). Notably, when we inoculated germ-free mice with a defined microbial community of 14 Clostridia and 3 Erysipelotrichia isolates, we observed the inverse, with a marked decrease in the concentrations of sugar acids and polyols in cecal contents. The carbohydrate footprint produced by the defined microbial community was similar to that observed in gnotobiotic mice receiving a cecal microbiota transplant from conventional mice. Supplementation with sorbitol, a polyol used as artificial sweetener, increased cecal sorbitol concentrations in antibiotic-treated mice, which was abrogated after inoculation with a Clostridia isolate able to grow on sorbitol in vitro. CONCLUSIONS We conclude that consumption of sugar alcohols by Clostridia and Erysipelotrichia species depletes these metabolites from the intestinal lumen during homeostasis. Video abstract.
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Affiliation(s)
- Connor R Tiffany
- Department of Medical Microbiology and Immunology, School of Medicine, University of California, Davis, One Shields Avenue, Davis, CA, 95616, USA
| | - Jee-Yon Lee
- Department of Medical Microbiology and Immunology, School of Medicine, University of California, Davis, One Shields Avenue, Davis, CA, 95616, USA
| | - Andrew W L Rogers
- Department of Medical Microbiology and Immunology, School of Medicine, University of California, Davis, One Shields Avenue, Davis, CA, 95616, USA
| | - Erin E Olsan
- Department of Medical Microbiology and Immunology, School of Medicine, University of California, Davis, One Shields Avenue, Davis, CA, 95616, USA
- Present Address: Department of Biological Sciences, California State University Sacramento, 6000 J Street, Sacramento, CA, 95819, USA
| | - Pavel Morales
- Department of Pathology, Microbiology and Immunology, School of Veterinary Medicine, University of California, Davis, One Shields Avenue, Davis, CA, 95616, USA
| | - Franziska Faber
- Department of Medical Microbiology and Immunology, School of Medicine, University of California, Davis, One Shields Avenue, Davis, CA, 95616, USA
- Present Address: Institute for Molecular Infection Biology (IMIB), Faculty of Medicine, University of Würzburg, Josef-Schneider-Street 2/D15, 97080, Würzburg, Germany
| | - Andreas J Bäumler
- Department of Medical Microbiology and Immunology, School of Medicine, University of California, Davis, One Shields Avenue, Davis, CA, 95616, USA.
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20
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Zhao W, Zhou Y, Zhou X, Wang X, Ji Y. Host GRXC6 restricts Tomato yellow leaf curl virus infection by inhibiting the nuclear export of the V2 protein. PLoS Pathog 2021; 17:e1009844. [PMID: 34398921 PMCID: PMC8389846 DOI: 10.1371/journal.ppat.1009844] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/26/2021] [Revised: 08/26/2021] [Accepted: 07/27/2021] [Indexed: 11/27/2022] Open
Abstract
Geminiviruses cause serious symptoms and devastating losses in crop plants. With a circular, single-stranded DNA genome, geminiviruses multiply their genomic DNA in the nucleus, requiring the nuclear shuttling of viral proteins and viral genomic DNAs. Many host factors, acting as proviral or antiviral factors, play key roles in geminivirus infections. Here, we report the roles of a tomato glutaredoxin (GRX), SlGRXC6, in the infection of Tomato yellow leaf curl virus (TYLCV), a single-component geminivirus. The V2 protein of TYLCV specifically and preferentially interacts with SlGRXC6 among the 55-member tomato GRX family that are broadly involved in oxidative stress responses, plant development, and pathogen responses. We show that overexpressed SlGRXC6 increases the nuclear accumulation of V2 by inhibiting its nuclear export and, in turn, inhibits trafficking of the V1 protein and viral genomic DNA. Conversely, the silenced expression of SlGRXC6 leads to an enhanced susceptibility to TYLCV. SlGRXC6 is also involved in symptom development as we observed a positive correlation where overexpression of SlGRXC6 promotes while knockdown of SlGRXC6 expression inhibits plant growth. We further showed that SlGRXC6 works with SlNTRC80, a tomato NADPH-dependent thioredoxin reductase, to regulate plant growth. V2 didn’t interact with SlNTRC80 but competed with SlNTR80 for binding to SlGRXC6, suggesting that the V2-disrupted SlGRXC6-SlNTRC80 interaction is partially responsible for the virus-caused symptoms. These results suggest that SlGRXC6 functions as a host restriction factor that inhibits the nuclear trafficking of viral components and point out a new way to control TYLCV infection by targeting the V2-SlGRXC6 interaction. Geminiviruses infect numerous crops, induce a wide range of symptoms, and cause tremendous crop losses annually. Tomato yellow leaf curl virus (TYLCV), a single-component geminivirus, is a causative agent leading to one of the most devastating tomato diseases in the world. As a single-stranded DNA virus, genomic replication occurs in the nucleus and therefore, the nuclear shuttling is a critical step of viral infection. The V2 protein of TYLCV is involved in symptom development and viral trafficking, among other steps, and hijacks host proteins for executing its functions. Nevertheless, host factors involved in the V2-mediated functions are not well addressed. We show that tomato GRXC6 (SlGRXC6) functions as a restriction factor of TYLCV infection by interacting with and preventing V2 from moving out of the nucleus, leading to the inhibited V2-mediated nuclear export of V1 and the V1-viral DNA complex. SlGRXC6 also contributes to symptom development via its interaction with SINTRC80. V2 sequesters SlGRXC6 from forming the SlGRXC6-SlNTRC80 complex and regulates plant growth. Our work, therefore, identified a new host partner of V2 and revealed the mechanisms whereby V2 functions as a pathogenicity determinant and can be targeted for virus control.
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Affiliation(s)
- Wenhao Zhao
- Key Lab of Food Quality and Safety of Jiangsu Province—State Key Laboratory Breeding Base, Institute of Plant Protection, Jiangsu Academy of Agricultural Sciences, Nanjing, China
- School of Plant and Environmental Sciences, Virginia Tech, Blacksburg, Virginia, United States of America
| | - Yijun Zhou
- Key Lab of Food Quality and Safety of Jiangsu Province—State Key Laboratory Breeding Base, Institute of Plant Protection, Jiangsu Academy of Agricultural Sciences, Nanjing, China
| | - Xueping Zhou
- State Key Laboratory for Biology of Plant Disease and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing, China
- State Key Laboratory of Rice Biology, Institute of Biotechnology, Zhejiang University, Hangzhou, China
- * E-mail: (XZ); (XW); (YJ)
| | - Xiaofeng Wang
- School of Plant and Environmental Sciences, Virginia Tech, Blacksburg, Virginia, United States of America
- * E-mail: (XZ); (XW); (YJ)
| | - Yinghua Ji
- Key Lab of Food Quality and Safety of Jiangsu Province—State Key Laboratory Breeding Base, Institute of Plant Protection, Jiangsu Academy of Agricultural Sciences, Nanjing, China
- * E-mail: (XZ); (XW); (YJ)
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21
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Mobarok MH, Skevas T, Thompson W. Women's empowerment in agriculture and productivity change: The case of Bangladesh rice farms. PLoS One 2021; 16:e0255589. [PMID: 34347833 PMCID: PMC8336850 DOI: 10.1371/journal.pone.0255589] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/15/2021] [Accepted: 07/20/2021] [Indexed: 11/18/2022] Open
Abstract
Using productivity change as a measure of farm economic performance, we analyze the relationship between women's empowerment in agriculture and farm productivity change and its components, which include efficiency change, technological change, and scale efficiency change. A non-parametric Malmquist approach is used to measure farm specific productivity change and its decomposition. We use a bootstrap regression to analyze factors that cause differences in productivity change and its components, testing, in particular, the role women's empowerment plays. The empirical application focuses on a sample of Bangladesh rice farms over the crop cultivation period 2011 and 2014. Results suggest that improvements in women's empowerment in agriculture were associated with higher levels of productivity change, efficiency change, and technical change, while they had no impact on scale efficiency change. We find that empowering women, specifically, improving their ability to make independent choices regarding agricultural production had a statistically significant positive association with productivity change, efficiency change, and technical change. We also find that lowering the gender parity gap is positively related with improving productivity of the sample farms.
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Affiliation(s)
- Mohammad Hasan Mobarok
- Division of Applied Social Sciences, University of Missouri, Columbia, MO, United States of America
- * E-mail:
| | - Theodoros Skevas
- Division of Applied Social Sciences, University of Missouri, Columbia, MO, United States of America
| | - Wyatt Thompson
- Division of Applied Social Sciences, University of Missouri, Columbia, MO, United States of America
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Mesgaran MB, Matzrafi M, Ohadi S. Sex dimorphism in dioecious Palmer amaranth (Amaranthus palmeri) in response to water stress. Planta 2021; 254:17. [PMID: 34185182 PMCID: PMC8241796 DOI: 10.1007/s00425-021-03664-7] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/08/2020] [Accepted: 06/15/2021] [Indexed: 06/13/2023]
Abstract
MAIN CONCLUSION Phenological isolation can potentially reduce seed output and may be exploited as a novel tool for ecological management of dioecious weeds. Dioecious plants may benefit from a maximized outcrossing and optimal sex-specific resource allocation; however, this breeding system may also be exploited for weed management. Seed production in dioecious species is contingent upon the co-occurrence and co-flowering of the two genders and can be further disturbed by flowering asynchrony. We explored dimorphism in secondary sex characters in Amaranthus palmeri, and tested if reproductive synchrony can be affected by water stress. We have used seeds of A. palmeri from California, Kansas and Texas, and studied secondary sex characters under natural conditions and in response to water stress. Seeds of A. palmeri from California (CA) and Kansas (KS) were cordially provided by Dr. Anil Shrestha (California State University, Fresno, California) and Dr. Dallas E. Peterson (Kansas State University, Manhattan, Kansas), respectively. Seeds of a third population were collected from mature plants (about 30 plants) from a set-aside field in College Station, Texas. A. palmeri showed no sexual dimorphism with regard to the timing of emergence, plant height, and relative growth rate. While the initiation of flowering occurred earlier in males than females, females preceded males in timing of anthesis. Water stress delayed anthesis in males to a greater extent than females increasing the anthesis mismatch between the two sexes by seven days. Our data provide the first evidence of environment-controlled flowering asynchrony in A. palmeri. From a practical point of view, phenological isolation can potentially reduce seed output and may be exploited as a novel tool for ecological management of dioecious weeds.
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Affiliation(s)
- Mohsen B Mesgaran
- Department of Plant Sciences, University of California, Davis, One Shields Avenue, Davis, CA, 95616, USA.
| | - Maor Matzrafi
- Department of Plant Sciences, University of California, Davis, One Shields Avenue, Davis, CA, 95616, USA
- Department of Plant Pathology and Weed Research, Agricultural Research Organization, Newe Ya'ar Research Center, Ramat Yishay, Israel
| | - Sara Ohadi
- Department of Plant Sciences, University of California, Davis, One Shields Avenue, Davis, CA, 95616, USA
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